331 results on '"Newbury, Dianne F."'
Search Results
2. The Development of Mental Health Difficulties in Young People with and without Developmental Language Disorder: A Gene-Environment Interplay Study Using Polygenic Scores
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Toseeb, Umar, Vincent, John, Oginni, Olakunle A., Asbury, Kathryn, and Newbury, Dianne F.
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Purpose: Young people with developmental language disorder (DLD) have poorer mental health than those without DLD. However, not all young people with DLD are equally affected; some have more mental health difficulties than others. What explains these differences remains unclear. Method: Data from a community cohort study, the Avon Longitudinal Study of Parents and Children, were analyzed to investigate genetic and environmental influences on the development of mental health difficulties at five time points from childhood (7 years) to adolescence (16 years) in 6,387 young people (8.7% with DLD). Regression and latent class models were fitted to the data. Results: Polygenic scores (PGSs), indices of genetic risk, for common psychiatric disorders (major depressive disorder, anxiety disorder, and attention deficit hyperactivity disorder) predicted mental health difficulties in both groups (with and without DLD). The presence of DLD, in some instances, amplified mental health difficulties for those with high genetic risk for common psychiatric disorders. Subgroups of children with similar developmental trajectories of mental health difficulties were identified. Young people with DLD were more likely than those without DLD to follow mental health subgroups characterized by consistently high levels of difficulties during development. PGSs, socioeconomic status, and the early home environment distinguished subgroups with low mental health difficulties from those characterized by high levels of difficulties, but these effects did not differ based on DLD status. Conclusions: These findings suggest that, for the most part, both genetic and environmental risk affect the development of mental health difficulties in a cumulative way for young people with DLD (and those without). Some analysis did, however, suggest that genetic risk for common psychiatric disorders might manifest more strongly in those with DLD compared with those without DLD.
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- 2023
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3. Language and Reading Impairments Are Associated with Increased Prevalence of Non-Right-Handedness
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Abbondanza, Filippo, Dale, Philip S., Wang, Carol A., Hayiou-Thomas, Marianna E., Toseeb, Umar, Koomar, Tanner S., Wigg, Karen G., Feng, Yu, Price, Kaitlyn M., Kerr, Elizabeth N., Guger, Sharon L., Lovett, Maureen W., Strug, Lisa J., van Bergen, Elsje, Dolan, Conor V., Tomblin, J. Bruce, Moll, Kristina, Schulte-Körne, Gerd, Neuhoff, Nina, Warnke, Andreas, Fisher, Simon E., Barr, Cathy L., Michaelson, Jacob J., Boomsma, Dorret I., Snowling, Margaret J., Hulme, Charles, Whitehouse, Andrew J. O., Pennell, Craig E., Newbury, Dianne F., Stein, John, Talcott, Joel B., Bishop, Dorothy V. M., and Paracchini, Silvia
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Handedness has been studied for association with language-related disorders because of its link with language hemispheric dominance. No clear pattern has emerged, possibly because of small samples, publication bias, and heterogeneous criteria across studies. Non-right-handedness (NRH) frequency was assessed in N = 2503 cases with reading and/or language impairment and N = 4316 sex-matched controls identified from 10 distinct cohorts (age range 6-19 years old; European ethnicity) using a priori set criteria. A meta-analysis (N[subscript cases] = 1994) showed elevated NRH % in individuals with language/reading impairment compared with controls (OR = 1.21, CI = 1.06-1.39, p = 0.01). The association between reading/language impairments and NRH could result from shared pathways underlying brain lateralization, handedness, and cognitive functions.
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- 2023
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4. Scaling Up Early Language Intervention in Educational Settings: First Steps Matter
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Ramacciotti, Mirela C. C., Sousa, Helena, Silveira, Heloisa G., Hulme, Charles, Snowling, Margaret J., Newbury, Dianne F., and Puglisi, Marina L.
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Objective: To report how improvements on a Brazilian language intervention for early childhood education settings (PROLIN) were made and evaluated. Study Design: In the first phase, the programme layout and materials were improved. This involved redesigning the guidelines for the programme, adding videos (using a learning management system) and creating an observation checklist to monitor the fidelity of implementation. The second phase was a two-week pilot study (a seven-session intervention) involving two teachers and 22 students. Checklists and video footage were analysed to investigate implementation. Results: Quality of implementation was generally good, but we identified additional areas for improvement. Teachers had some difficulties with aspects related to session dynamics, implementation of activities and use of techniques that reinforce learning. Conclusions: The pilot study was instrumental in identifying obstacles for a scaled-up, high-quality implementation. The design of these materials took into consideration ways of guiding and supporting teachers to: (1) offer students adequate participation time; (2) help include children who are shy or have behaviour problems; (3) use teaching strategies properly; (4) bring sessions to a close; and (5) reach the objectives of each session. Further modification is still needed, especially in the manual, videos and supplementary materials.
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- 2023
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5. Genome-wide analyses of individual differences in quantitatively assessed reading- and language-related skills in up to 34,000 people
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Eising, Else, Mirza-Schreiber, Nazanin, de Zeeuw, Eveline L., Wang, Carol A., Truong, Dongnhu T., Allegrini, Andrea G., Shapland, Chin Yang, Zhu, Gu, Wigg, Karen G., Gerritse, Margot L., Molz, Barbara, Alagöz, Gökberk, Gialluisi, Alessandro, Abbondanza, Filippo, Rimfeld, Kaili, van Donkelaar, Marjolein, Jansen, Philip R., Andlauer, Till F. M., Bates, Timothy C., Bernard, Manon, Blokland, Kirsten, Bonte, Milene, Børglumz, Anders D., Bourgeron, Thomas, Brandeis, Daniel, Ceroni, Fabiola, Csépe, Valéria, Dale, Philip S., de Jong, Peter F., DeFries, John C., Démonet, Jean-François, Demontisz, Ditte, Feng, Yu, Gordon, Scott D., Guger, Sharon L., Hayiou-Thomas, Marianna E., Hernández-Cabrera, Juan A., Hottenga, Jouke-Jan, Hulme, Charles, Kere, Juha, Kerr, Elizabeth N., Koomar, Tanner, Landerl, Karin, Leonard, Gabriel T., Lovett, Maureen W., Lyytinen, Heikki, Martin, Nicholas G., Martinelli, Angela, Maurer, Urs, Michaelson, Jacob J., Moll, Kristina, Monaco, Anthony P., Morgan, Angela T., Nöthen, Markus M., Pausovaw, Zdenka, Pennell, Craig E., Pennington, Bruce F., Price, Kaitlyn M., Rajagopal, Veera M., Ramus, Franck, Richer, Louis, Simpson, Nuala H., Smith, Shelley D., Snowling, Margaret J., Stein, John, Strug, Lisa J., Talcott, Joel B., Tiemeier, Henning, van der Schroeff, Marc P., Verhoef, Ellen, Watkins, Kate E., Wilkinson, Margaret, Wright, Margaret J., Barr, Cathy L., Boomsma, Dorret I., Carreiras, Manuel, Franken, Marie-Christine J., Gruen, Jeffrey R., Luciano, Michelle, Müller-Myhsok, Bertram, Newbury, Dianne F., Olson, Richard K., Paracchini, Silvia, Paus, Tomáš, Plomin, Robert, Reillyg, Sheena, Schulte-Körne, Gerd, Tomblin, J. Bruce, van Bergen, Elsje, Whitehouse, Andrew J. O., Willcutt, Erik G., St Pourcain, Beate, Francks, Clyde, and Fisher, Simon E.
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- 2022
6. The Effects of Prenatal Smoke Exposure on Language Development -- A Systematic Review
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Peixinho, Jessica, Toseeb, Umar, Mountford, Hayley S., Bermudez, Isabel, and Newbury, Dianne F.
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The negative health effects of cigarette smoking during pregnancy (SDP) on the foetus are well known. Despite previous reports of poor cognitive performance in offspring exposed to SDP, few studies specifically consider language outcomes according to maternal smoking. In this study, we systematically review the literature to assess the relationships between SDP and child language. Of the 14 studies reviewed, 13 (93%) reported significant associations between maternal smoking or exposure and language outcomes. Despite this consistent association, only 8 of the 13 studies reporting associations (62%) concluded direct relationships between exposure and outcome. The remaining studies suggested that the relationship between smoking and language could be explained by factors such as maternal IQ, socioeconomic status (SES) and parental age. Future studies should apply careful study designs allowing for confounding factors across child, parental, environmental and genetic influences. Our review suggests that smoking cessation is likely to positively affect child language outcomes.
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- 2022
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7. The Genetic Population Structure of Robinson Crusoe Island, Chile
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Mountford, Hayley S, Villanueva, Pía, Fernández, María Angélica, Jara, Lilian, De Barbieri, Zulema, Carvajal-Carmona, Luis G, Cazier, Jean-Baptiste, and Newbury, Dianne F
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Biological Sciences ,Genetics ,Human Genome ,1.1 Normal biological development and functioning ,Robinson Crusoe Island ,population genetics ,admixture ,Chile ,Latin America ,Clinical Sciences ,Law - Abstract
Studies examining genetic conditions common in Latin America are highly underrepresented in the scientific literature. Understanding of the population structure is limited, particularly Chile, in part due to the lack of available population specific data. An important first-step in elucidating disease mechanisms in Latin America countries is to understand the genetic structure of isolated populations. Robinson Crusoe Island (RCI) is a small land mass off the coast of Chile. The current population of over 900 inhabitants are primarily descended from a small number of founders who colonized the island in the late 1800s. Extensive genealogical records can trace the ancestry of almost the entire population. We perform a comprehensive genetic analysis to investigate the ancestry of the island population, examining ancestral mitochondrial and Y chromosome haplogroups, as well as autosomal admixture. Mitochondrial and Y chromosome haplogroups indicated a substantial European genetic contribution to the current RCI population. Analysis of the mitochondrial haplogroups found in the present-day population revealed that 79.1% of islanders carried European haplogroups, compared to 60.0% of the mainland Chilean controls from Santiago. Both groups showed a substantially lower contribution of indigenous haplogroups than expected. Analysis of the Y chromosome haplogroups also showed predominantly European haplogroups detected in 92.3% of male islanders and 86.7% of mainland Chilean controls. Using the near-complete genealogical data collected from the RCI population, we successfully inferred the ancestral haplogroups of 16/23 founder individuals, revealing genetic ancestry from Northern and Southern Europe. As mitochondrial and Y investigations only provide information for direct maternal and paternal lineages, we expanded this to investigate genetic admixture using the autosomes. Admixture analysis identified substantial indigenous genetic admixture in the RCI population (46.9%), higher than that found in the Santiago mainland Chilean controls (43.4%), but lower than a more representative Chilean population (Chile_GRU) (49.1%). Our study revealed the Robinson Crusoe Island population show a substantial genetic contribution for indigenous Chileans, similar to the level reported in mainland Chileans. However, direct maternal and paternal haplogroup analysis revealed strong European genetic contributions consistent with the history of the Island.
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- 2020
8. Pathways from the Early Language and Communication Environment to Literacy Outcomes at the End of Primary School; The Roles of Language Development and Social Development
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Gibson, Jenny L., Newbury, Dianne F., Durkin, Kevin, Pickles, Andrew, Conti-Ramsden, Gina, and Toseeb, Umar
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The quality of a child's early language and communication environment (ELCE) is an important predictor of later educational outcomes. However, less is known about the routes via which these early experiences influence the skills that support academic achievement. Using data from the Avon Longitudinal Study of Parents and Children (n = 7,120) we investigated relations between ELCE (<2 years), literacy and social adjustment at school entry (5 years), structural language development and social development in mid-primary school (7-9 years), and literacy outcomes (reading and writing) at the end of primary school (11 years) using structural equation modelling. ELCE was a significant, direct predictor of social adjustment and literacy skills at school entry and of linguistic and social competence at 7-9 years. ELCE did not directly explain variance in literacy outcomes at the end of primary school, instead the influence was exerted via indirect paths through literacy and social adjustment aged 5, and, language development and social development at 7-9 years. Linguistic and social skills were both predictors of literacy skills at the end of primary school. Findings are discussed with reference to their potential implications for the timing and targets of interventions designed to improve literacy outcomes.
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- 2021
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9. Play and Prosociality Are Associated with Fewer Externalizing Problems in Children with Developmental Language Disorder: The Role of Early Language and Communication Environment
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Toseeb, Umar, Gibson, Jenny L., Newbury, Dianne F., Orlik, Witold, Durkin, Kevin, Pickles, Andrew, and Conti-Ramsden, Gina
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Background: Children with developmental language disorder (DLD) are at higher risk of poorer mental health compared with children without DLD. There are, however, considerable individual differences that need to be interpreted, including the identification of protective factors. Aims: Pathways from the early language and communication environment (ELCE, 1-2 years) to internalizing (peer and emotional problems) and externalizing (conduct problems and hyperactivity) problems in middle childhood (11 years) were mapped using structural equation modelling. Specifically, the role of indirect pathways via social skills (friendships, play and prosociality) in childhood (7-9 years) was investigated. Methods & Procedures: Secondary analysis of existing data from the Avon Longitudinal Study of Parents and Children (ALSPAC) was undertaken. The study sample consisted of 6531 children (394 with DLD). Outcomes & Results: The pathways from the ELCE to internalizing and externalizing problems were similar for children with and without DLD. For both groups, a positive ELCE was associated with more competent social play and higher levels of prosociality in childhood, which in turn were associated with fewer externalizing problems in middle childhood. Furthermore, better friendships and higher levels of prosociality in childhood were both associated with fewer internalizing problems in middle childhood. Conclusions & Implications: A child's ELCE is potentially important not only for the development of language but also for social development. Furthermore, in the absence of adequate language ability, play and prosocial behaviours may allow children with DLD to deploy, practise and learn key social skills, thus protecting against externalizing problems. We suggest that consideration be given to play- and prosociality-based educational and therapeutic services for children with DLD.
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- 2020
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10. Using Polygenic Profiles to Predict Variation in Language and Psychosocial Outcomes in Early and Middle Childhood
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Newbury, Dianne F., Gibson, Jenny L., Conti-Ramsden, Gina, Pickles, Andrew, Durkin, Kevin, and Toseeb, Umar
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Purpose: Children with poor language tend to have worse psychosocial outcomes compared to their typically developing peers. The most common explanations for such adversities focus on developmental psychological processes whereby poor language triggers psychosocial difficulties. Here, we investigate the possibility of shared biological effects by considering whether the same genetic variants, which are thought to influence language development, are also predictors of elevated psychosocial difficulties during childhood. Method: Using data from the U.K.-based Avon Longitudinal Study of Parents and Children, we created a number of multi-single-nucleotide polymorphism polygenic profile scores, based on language and reading candidate genes ("ATP2C2," "CMIP," "CNTNAP2," "DCDC2," "FOXP2," and "KIAA0319," 1,229 single-nucleotide polymorphisms) in a sample of 5,435 children. Results: A polygenic profile score for expressive language (8 years) that was created in a discovery sample (n = 2,718) predicted not only expressive language (8 years) but also peer problems (11 years) in a replication sample (n = 2,717). Conclusions: These findings provide a proof of concept for the use of such a polygenic approach in child language research when larger data sets become available. Our indicative findings suggest consideration should be given to concurrent intervention targeting both linguistic and psychosocial development as early language interventions may not stave off later psychosocial difficulties in children.
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- 2019
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11. The effects of reading and language intervention on literacy skills in children in a remote community: An exploratory randomized controlled trial
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Mesa, Carol, Newbury, Dianne F., Nash, Marysia, Clarke, Paula, Esposito, Rosanne, Elliott, Louise, De Barbieri, Zulema, Fernández, Ma. Angélica, Villanueva, Pia, Hulme, Charles, and Snowling, Margaret J.
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- 2020
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12. Exome sequencing in an admixed isolated population indicates NFXL1 variants confer a risk for specific language impairment.
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Villanueva, Pía, Nudel, Ron, Hoischen, Alexander, Fernández, María Angélica, Simpson, Nuala H, Gilissen, Christian, Reader, Rose H, Jara, Lillian, Echeverry, María Magdalena, Francks, Clyde, Baird, Gillian, Conti-Ramsden, Gina, O'Hare, Anne, Bolton, Patrick F, Hennessy, Elizabeth R, SLI Consortium, Palomino, Hernán, Carvajal-Carmona, Luis, Veltman, Joris A, Cazier, Jean-Baptiste, De Barbieri, Zulema, Fisher, Simon E, and Newbury, Dianne F
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SLI Consortium ,Humans ,Apraxias ,Genetic Predisposition to Disease ,Carrier Proteins ,Membrane Proteins ,Genetics ,Population ,Child ,Child ,Preschool ,Female ,Male ,Genetic Association Studies ,High-Throughput Nucleotide Sequencing ,Exome ,Preschool ,Genetics ,Population ,Developmental Biology - Abstract
Children affected by Specific Language Impairment (SLI) fail to acquire age appropriate language skills despite adequate intelligence and opportunity. SLI is highly heritable, but the understanding of underlying genetic mechanisms has proved challenging. In this study, we use molecular genetic techniques to investigate an admixed isolated founder population from the Robinson Crusoe Island (Chile), who are affected by a high incidence of SLI, increasing the power to discover contributory genetic factors. We utilize exome sequencing in selected individuals from this population to identify eight coding variants that are of putative significance. We then apply association analyses across the wider population to highlight a single rare coding variant (rs144169475, Minor Allele Frequency of 4.1% in admixed South American populations) in the NFXL1 gene that confers a nonsynonymous change (N150K) and is significantly associated with language impairment in the Robinson Crusoe population (p = 2.04 × 10-4, 8 variants tested). Subsequent sequencing of NFXL1 in 117 UK SLI cases identified four individuals with heterozygous variants predicted to be of functional consequence. We conclude that coding variants within NFXL1 confer an increased risk of SLI within a complex genetic model.
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- 2015
13. Corrigendum: Genome-wide association study of motor coordination
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Mountford, Hayley S., primary, Hill, Amanda, additional, Barnett, Anna L., additional, and Newbury, Dianne F., additional
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- 2024
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14. Family Aggregation of Language Impairment in an Isolated Chilean Population from Robinson Crusoe Island
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De Barbieri, Zulema, Fernández, María Angélica, Newbury, Dianne F., and Villanueva, Pía
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Background: It has been reported that the inhabitants of the Chilean Robinson Crusoe Island have an increased frequency of specific language impairment (SLI) or developmental language disorder (DLD). Aims: To explore the familial aggregation of DLD in this community. Methods & Procedures: We assessed the frequency of DLD amongst colonial children between the ages of 3 and 8;11 years (50 individuals from 45 nuclear families). Familial aggregation rates of language disorder were calculated by assessing all available first-degree relatives (n = 107, 77 parents, 25 siblings, five half-siblings) of the probands. Outcomes & Results: We found that 71% of the child population performed significantly below expected in measures of phonological production or expressive and receptive morphology. The majority of these children presented with severe expressive and/or receptive language difficulties. One-quarter of language-disordered probands primarily had phonological difficulties. Family members of affected probands experienced a higher risk of language disorder than those of typically developing probands. This increased risk was apparent regardless of non-verbal IQ. Conclusions & Implications: The study substantiates the existence of a familial form of speech and language disorder on Robinson Crusoe Island. Furthermore, we find that the familiarity is stable regardless of non-verbal IQ, supporting the recent movement to reduce the importance of non-verbal IQ criterion in DLD diagnoses.
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- 2018
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15. Analysis of exome data in a UK cohort of 603 patients with syndromic orofacial clefting identifies causal molecular pathways
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Wilson, Kate, Newbury, Dianne F., and Kini, Usha
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Genetics ,General Medicine ,Molecular Biology ,Genetics (clinical) - Abstract
Orofacial cleft (OC) is a common congenital anomaly in humans, which has lifelong implications for affected individuals. This disorder can be classified as syndromic or non-syndromic depending on the presence or absence of additional physical or neurodevelopmental abnormalities, respectively. Non-syndromic cleft is often non-familial in nature and has a complex aetiology, whereas syndromic forms tend to be monogenic. Although individual OC-related syndromes have been frequently described in the medical literature, there has not been a comprehensive review across syndromes, thereby leaving a gap in our knowledge, which this paper aims to address. Six hundred and three patients with cleft-related human phenotype ontology terms were identified within the Deciphering Developmental Disorders study. Genes carrying pathogenic/likely pathogenic variants were identified and reviewed enabling a diagnostic yield of 36.5%. In total, 124 candidate genes for syndromic OC were identified, including 34 new genes that should be considered for inclusion in clinical clefting panels. Functional enrichment and gene expression analyses identified three key processes that were significantly overrepresented in syndromic OC gene lists: embryonic morphogenesis, protein stability and chromatin organization. Comparison with non-syndromic OC gene networks led us to propose that chromatin remodelling specifically contributes to the aetiology of syndromic OC. Disease-driven gene discovery is a valid approach to gene identification and curation of gene panels. Through this approach, we have started to unravel common molecular pathways contributing to syndromic orofacial clefting.
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- 2023
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16. Genome-Wide Association Study of Motor Coordination.
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Mountford, Hayley S., Hill, Amanda, Barnett, Anna L., and Newbury, Dianne F.
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MOTOR ability ,GENOME-wide association studies ,APRAXIA ,NATURE & nurture ,ECOLOGICAL genetics - Abstract
The ability to finely control our movement is key to achieving many of the educational milestones and life-skills we develop throughout our lives. Despite the centrality of coordination to early development, there is a vast gap in our understanding of the underlying biology. Like most complex traits, both genetics and environment influence motor coordination, however, the specific genes, early environmental risk factors and molecular pathways are unknown. Previous studies have shown that about 5% of school-age children experience unexplained difficulties with motor coordination. These children are said to have Developmental Coordination Disorder (DCD). For children with DCD, these motor coordination difficulties significantly impact their everyday life and learning. DCD is associated with poorer academic achievement, reduced quality of life, it can constrain career opportunities and increase the risk of mental health issues in adulthood. Despite the high prevalence of coordination difficulties, many children remain undiagnosed by healthcare professionals. Compounding under-diagnosis in the clinic, research into the etiology of DCD is severely underrepresented in the literature. Here we present the first genome-wide association study to examine the genetic basis of early motor coordination in the context of motor difficulties. Using data from the Avon Longitudinal Study of Parents and Children we generate a derived measure of motor coordination from four components of the Movement Assessment Battery for Children, providing an overall measure of coordination across the full range of ability. We perform the first genome-wide association analysis focused on motor coordination (N = 4542). No single nucleotide polymorphisms (SNPs) met the threshold for genomewide significance, however, 59 SNPs showed suggestive associations. Three regions contained multiple suggestively associated SNPs, within five preliminary candidate genes: IQSEC1, LRCC1, SYNJ2B2, ADAM20, and ADAM21. Association to the gene IQSEC1 suggests a potential link to axon guidance and dendritic projection processes as a potential underlying mechanism of motor coordination difficulties. This represents an interesting potential mechanism, and whilst further validation is essential, it generates a direct window into the biology of motor coordination difficulties. This research has identified potential biological drivers of DCD, a first step towards understanding this common, yet neglected neurodevelopmental disorder. [ABSTRACT FROM AUTHOR]
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- 2024
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17. The Genetics of Language Acquisition
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Mountford, Hayley S., primary and Newbury, Dianne F., additional
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- 2019
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18. Genetic contributions to neurodevelopmental disorders
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Newbury, Dianne F., primary
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- 2019
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19. A genome wide screen for loci involved in specific language impairment
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Newbury, Dianne F.
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616 ,Speech disorders ,Genetic aspects - Abstract
Approximately 4% of English-speaking children are affected by Specific Language Impairment (SLI); a disorder in the development of language skills despite adequate opportunity and normal intelligence. Several studies have indicated the importance of genetic factors in SLI; a positive family history confers an increased risk of development, and monozygotic concordance consistently exceeds that of dizygotic twins. However, like many behavioural traits, SLI is assumed to be genetically complex with several loci contributing to the overall risk. This thesis aims to clarify the genetic mechanisms underlying Specific Language Impairment by the exploitation of recent advances in technological, genetic and statistical techniques. This goal is achieved, for the main part, through the completion of the first-ever, systematic genome-wide screen for loci involved in the disorder. A collection of 98 families was drawn from both epidemiological and clinical populations, all with probands who display severe deficits in language skills. Genome-wide linkage analyses were completed for three language-related measures and identified two regions which may harbour susceptibility gene variants for SLI, one on chromosome 16 and a second on chromosome 19. Both of these loci yielded maximum LOD scores of 3.55 and exceeded the threshold for suggestive linkage under all types of analysis performed. Fine mapping of the chromosome 19 locus with a high-density map of microsatellite markers provided further support for the role of this region in SLI but failed to narrow the area of linkage. The second section of the thesis therefore explores alternative genetic strategies that may facilitate the localisation of susceptibility variants from the genomic regions identified. Mutation screening and association analyses were performed for two candidate genes within a subset of 48 families affected by SLI. The first ⎼ numblike (NBL), or numb-related (NUMB-R) (MIM 604018) ⎼ was selected from the region of linkage on chromosome 19q and the second ⎼ Forkhead-bOX domain P2 (FOXP2) (MIM 605317) ⎼ has recently been shown to be mutated in a family with a severe speech and language disorder. Finally, I describe the mapping of a translocation breakpoint within a child affected by a severe language impairment and orofacial dyspraxia. This breakpoint lies on chromosome 2q and coincides with a putative region of linkage in both language impairment and autism. In the long-term it is hoped that techniques similar to those described here will allow the identification of the gene variants which underlie SLI allowing to the development of better diagnosis and treatment for those children with language impairments.
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- 2002
20. Scaling up early language intervention in educational settings: First steps matter
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Ramacciotti, Mirela C. C., primary, Sousa, Helena, additional, Silveira, Heloisa G., additional, Hulme, Charles, additional, Snowling, Margaret J., additional, Newbury, Dianne F., additional, and Puglisi, Marina L., additional
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- 2022
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21. The genetic and molecular basis of developmental language disorder: A review
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Mountford, Hayley S., Braden, Ruth, Newbury, Dianne F., Morgan, Angela T., Mountford, Hayley S., Braden, Ruth, Newbury, Dianne F., and Morgan, Angela T.
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Language disorders are highly heritable and are influenced by complex interactions between genetic and environmental factors. Despite more than twenty years of research, we still lack critical understanding of the biological underpinnings of language. This review provides an overview of the genetic landscape of developmental language disorders (DLD), with an emphasis on the importance of defining the specific features (the phenotype) of DLD to inform gene discovery. We review the specific phenotype of DLD in the genetic literature, and the influence of historic variation in diagnostic inclusion criteria on researchers’ ability to compare and replicate genotype-phenotype studies. This review provides an overview of the recently identified gene pathways in populations with DLD and explores current state-of-the-art approaches to genetic analysis based on the hypothesized architecture of DLD. We will show how recent global efforts to unify diagnostic criteria have vastly increased sample size and allow for large multi-cohort metanalyses, leading the identification of a growing number of contributory loci. We emphasize the important role of estimating the genetic architecture of DLD to decipher underlying genetic associations. Finally, we explore the potential for epigenetics and environmental interactions to further unravel the biological basis of language disorders.
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- 2022
22. Evaluation of elements in hair samples of children with Developmental Language Disorder (DLD)
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Rashaid, Ayat Bani, Alqhazo, Mazin, Kanaan, Heba, Newbury, Dianne F., El-khateeb, Mohammad, Abukashabeh, Ahmad, Al-Tamimi, Feda, Rashaid, Ayat Bani, Alqhazo, Mazin, Kanaan, Heba, Newbury, Dianne F., El-khateeb, Mohammad, Abukashabeh, Ahmad, and Al-Tamimi, Feda
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BACKGROUND: Recent studies have highlighted a role for trace trace elements and toxic metals across neurodevelopmental disorders including developmental stuttering, Autistic Spectrum Disorders (ASD) and Attention Deficit/Hyperactivity Disorder (ADHD). However, these environmental influences have yet to be explored in relation to Developmental Language Disorder (DLD). METHODS: Elemental hair composition of 7 elements; zinc (64Zn), magnesium (26Mg), iron (57Fe), potassium (39K), aluminum (27Al), lead (208Pb), and barium (138Ba) were analyzed in hair samples from 35 children affected by DLD and 35 controls with typical language development (TLD) using both inductive coupled plasma optical emission spectroscopy (ICP–OES) and inductive coupled plasma mass spectroscopy (ICP–MS). RESULTS: The concentration of 64Zn was significantly lower in the hair of DLD group compared to the TLD control group. All other elements showed similar levels between cases and controls. This pilot study demonstrates the utility of trace elements and toxic metals screening in relation to language disorders and the use of hair samples in such investigations. CONCLUSION: The finding that zinc levels differed between cases and controls could represent a clinically relevant result and should be replicated in a larger sample size across time. A wider battery of related elements will help to better understand the role of trace elements and toxic metals in DLD.
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- 2022
23. Challenges for Implementation in Diverse Settings: reflections on two randomised controlled trials of educational interventions in South American communities
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Newbury, Dianne F., Mesa C, Puglisis M, Nash M, Nag S, Hulme C, Snowling MJ, Newbury, Dianne F., Mesa C, Puglisis M, Nash M, Nag S, Hulme C, and Snowling MJ
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Research in the UK suggests that multi-componential interventions focusing on language and pre-literacy skills can improve children’s reading and language skills. However, simple translations of such programs may not produce equivalent effects in diverse communities. The reasons for this are multi-faceted and include factors beyond the rationale and content of the intervention programs themselves. Understanding these factors is critical for creating programs that will generalise across settings. In this review, we reflect upon challenges encountered in two reading and language intervention programs in South America to identify community and cultural contextual factors that can influence the implementation and scalability of educational programs. We use our findings to develop an education-specific framework to guide the development and implementation of high-quality evidence-based approaches to language and literacy intervention. Our model guides implementation practices in diverse contexts and stresses the importance of the evidence-base and communication.
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- 2022
24. Scaling up early language intervention in educational settings: First steps matter
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Ramacciotti, Mirela C.C., Sousa, Helena, Silveira, Heloisa G., Hulme, Charles, Snowling, Margaret J., Newbury, Dianne F., Puglisi, Marina L., Ramacciotti, Mirela C.C., Sousa, Helena, Silveira, Heloisa G., Hulme, Charles, Snowling, Margaret J., Newbury, Dianne F., and Puglisi, Marina L.
- Abstract
Objective: To report how improvements on a Brazilian language intervention for early childhood education settings (PROLIN) were made and evaluated. Study Design: In the first phase, the programme layout and materials were improved. This involved redesigning the guidelines for the programme, adding videos (using a learning management system) and creating an observation checklist to monitor the fidelity of implementation. The second phase was a two-week pilot study (a 7-session intervention) involving two teachers and 22 students. Checklists and video footage were analysed to investigate implementation. Results: Quality of implementation was generally good, but we identified additional areas for improvement. Teachers had some difficulties with aspects related to session dynamics, implementation of activities and use of techniques that reinforce learning. Conclusions: The pilot study was instrumental in identifying obstacles for a scaled-up, high-quality implementation. The design of these materials took into consideration ways of guiding and supporting teachers:(1) to offer students adequate participation time; (2) to help include children who are shy or have behaviour problems; (3) to use teaching strategies properly; (4) to bring sessions to a close; and (5) to reach the objectives of each session. Further modification is still needed, especially in the manual, videos and supplementary materials.
- Published
- 2022
25. DCDC2, KIAA0319 and CMIP Are Associated with Reading-Related Traits
- Author
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Scerri, Tom S., Morris, Andrew P., Buckingham, Lyn-Louise, Newbury, Dianne F., Miller, Laura L., Monaco, Anthony P., Bishop, Dorothy V.M., and Paracchini, Silvia
- Published
- 2011
- Full Text
- View/download PDF
26. The Genetic and Molecular Basis of Developmental Language Disorder: A Review
- Author
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Mountford, Hayley S., primary, Braden, Ruth, additional, Newbury, Dianne F., additional, and Morgan, Angela T., additional
- Published
- 2022
- Full Text
- View/download PDF
27. Genome-Wide Studies of Specific Language Impairment
- Author
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Reader, Rose H., Covill, Laura E., Nudel, Ron, and Newbury, Dianne F.
- Published
- 2014
- Full Text
- View/download PDF
28. Evaluation of elements in hair samples of children with developmental language disorder (DLD).
- Author
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Rashaid, Ayat Bani, Alqhazo, Mazin, Newbury, Dianne F., Kanaan, Heba, El-khateeb, Mohammad, Abukashabeh, Ahmad, and Al-Tamimi, Feda
- Subjects
LANGUAGE disorders ,TRACE elements ,HEAVY metals ,CHILDREN'S language ,AUTISM spectrum disorders ,LEAD - Abstract
Recent studies have highlighted a role for trace elements and toxic metals across neurodevelopmental disorders, including developmental stuttering, Autistic Spectrum Disorders (ASD), and Attention Deficit/Hyperactivity Disorder (ADHD). However, these environmental influences have yet to be explored in relation to Developmental Language Disorder (DLD). Elemental hair composition of seven elements; zinc (
64 Zn), magnesium (26 Mg), iron (57 Fe), potassium (39 K), aluminum (27 Al), lead (208 Pb), and barium (138 Ba) were analyzed in hair samples from 35 children affected by DLD and 35 controls with typical language development (TLD) using both inductive coupled plasma optical emission spectroscopy (ICP–OES) and inductive coupled plasma mass spectroscopy (ICP–MS). The concentration of64 Zn was significantly lower in the hair of DLD group compared to the TLD control group. All other elements showed similar levels between cases and controls. This pilot study demonstrates the utility of trace elements and toxic metals screening in relation to language disorders and the use of hair samples in such investigations. The finding that zinc levels differed between cases and controls could represent a clinically relevant result and should be replicated in larger sample size across time. A wider battery of related elements will help to better understand the role of trace elements and toxic metals in DLD. [ABSTRACT FROM AUTHOR]- Published
- 2023
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- View/download PDF
29. Evaluation of elements in hair samples of children with developmental language disorder (DLD)
- Author
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Rashaid, Ayat Bani, primary, Alqhazo, Mazin, additional, Newbury, Dianne F., additional, Kanaan, Heba, additional, El-khateeb, Mohammad, additional, Abukashabeh, Ahmad, additional, and Al-Tamimi, Feda, additional
- Published
- 2022
- Full Text
- View/download PDF
30. Genome-wide association analyses of individual differences in quantitatively assessed reading- and language-related skills in up to 34,000 people
- Author
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Eising, Else, primary, Mirza-Schreiber, Nazanin, additional, de Zeeuw, Eveline L., additional, Wang, Carol A., additional, Truong, Dongnhu T., additional, Allegrini, Andrea G., additional, Shapland, Chin Yang, additional, Zhu, Gu, additional, Wigg, Karen G., additional, Gerritse, Margot, additional, Molz, Barbara, additional, Alagöz, Gökberk, additional, Gialluisi, Alessandro, additional, Abbondanza, Filippo, additional, Rimfeld, Kaili, additional, van Donkelaar, Marjolein, additional, Liao, Zhijie, additional, Jansen, Philip R., additional, Andlauer, Till F. M., additional, Bates, Timothy C., additional, Bernard, Manon, additional, Blokland, Kirsten, additional, Børglum, Anders D., additional, Bourgeron, Thomas, additional, Brandeis, Daniel, additional, Ceroni, Fabiola, additional, Dale, Philip S., additional, Landerl, Karin, additional, Lyytinen, Heikki, additional, de Jong, Peter F., additional, DeFries, John C., additional, Demontis, Ditte, additional, Feng, Yu, additional, Gordon, Scott D., additional, Guger, Sharon L., additional, Hayiou-Thomas, Marianna E., additional, Hernández-Cabrera, Juan A., additional, Hottenga, Jouke-Jan, additional, Hulme, Charles, additional, Kerr, Elizabeth N., additional, Koomar, Tanner, additional, Lovett, Maureen W., additional, Martin, Nicholas G., additional, Martinelli, Angela, additional, Maurer, Urs, additional, Michaelson, Jacob J., additional, Moll, Kristina, additional, Monaco, Anthony P., additional, Morgan, Angela T., additional, Nöthen, Markus M., additional, Pausova, Zdenka, additional, Pennell, Craig E., additional, Pennington, Bruce F, additional, Price, Kaitlyn M., additional, Rajagopal, Veera M., additional, Ramus, Frank, additional, Richer, Louis, additional, Simpson, Nuala H., additional, Smith, Shelley, additional, Snowling, Margaret J., additional, Stein, John, additional, Strug, Lisa J., additional, Talcott, Joel B., additional, Tiemeier, Henning, additional, van de Schroeff, Marc M.P., additional, Verhoef, Ellen, additional, Watkins, Kate E., additional, Wilkinson, Margaret, additional, Wright, Margaret J., additional, Barr, Cathy L., additional, Boomsma, Dorret I., additional, Carreiras, Manuel, additional, Franken, Marie-Christine J., additional, Gruen, Jeffrey R., additional, Luciano, Michelle, additional, Müller-Myhsok, Bertram, additional, Newbury, Dianne F., additional, Olson, Richard K., additional, Paracchini, Silvia, additional, Paus, Tomas, additional, Plomin, Robert, additional, Schulte-Körne, Gerd, additional, Reilly, Sheena, additional, Tomblin, J. Bruce, additional, van Bergen, Elsje, additional, Whitehouse, Andrew J.O., additional, Willcutt, Erik G., additional, Pourcain, Beate St, additional, Francks, Clyde, additional, and Fisher, Simon E., additional
- Published
- 2021
- Full Text
- View/download PDF
31. Mutation-specific pathophysiological mechanisms define different neurodevelopmental disorders associated with SATB1 dysfunction
- Author
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den Hoed, Joery, de Boer, Elke, Voisin, Norine, Dingemans, Alexander J.M., Guex, Nicolas, Wiel, Laurens, Nellaker, Christoffer, Amudhavalli, Shivarajan M., Banka, Siddharth, Bena, Frederique S., Ben-Zeev, Bruria, Bonagura, Vincent R., Bruel, Ange-Line, Brunet, Theresa, Brunner, Han G., Chew, Hui B., Chrast, Jacqueline, Cimbalistienė, Loreta, Coon, Hilary, Délot, Emmanuèlle C., Démurger, Florence, Denommé-Pichon, Anne-Sophie, Depienne, Christel, Donnai, Dian, Dyment, David A., Elpeleg, Orly, Faivre, Laurence, Gilissen, Christian, Granger, Leslie, Haber, Benjamin, Hachiya, Yasuo, Abedi, Yasmin Hamzavi, Hanebeck, Jennifer, Hehir-Kwa, Jayne Y., Horist, Brooke, Itai, Toshiyuki, Jackson, Adam, Jewell, Rosalyn, Jones, Kelly L., Joss, Shelagh, Kashii, Hirofumi, Kato, Mitsuhiro, Kattentidt-Mouravieva, Anja A., Kok, Fernando, Kotzaeridou, Urania, Krishnamurthy, Vidya, Kučinskas, Vaidutis, Kuechler, Alma, Lavillaureix, Alinoë, Liu, Pengfei, Manwaring, Linda, Matsumoto, Naomichi, Mazel, Benoît, McWalter, Kirsty, Meiner, Vardiella, Mikati, Mohamad A., Miyatake, Satoko, Mizuguchi, Takeshi, Moey, Lip H., Mohammed, Shehla, Mor-Shaked, Hagar, Mountford, Hayley, Newbury-Ecob, Ruth, Odent, Sylvie, Orec, Laura, Osmond, Matthew, Palculict, Timothy B., Parker, Michael, Petersen, Andrea K., Pfundt, Rolph, Preikšaitienė, Eglė, Radtke, Kelly, Ranza, Emmanuelle, Rosenfeld, Jill A., Santiago-Sim, Teresa, Schwager, Caitlin, Sinnema, Margje, Snijders Blok, Lot, Spillmann, Rebecca C., Stegmann, Alexander P.A., Thiffault, Isabelle, Tran, Linh, Vaknin-Dembinsky, Adi, Vedovato-dos-Santos, Juliana H., Schrier Vergano, Samantha A., Vilain, Eric, Vitobello, Antonio, Wagner, Matias, Waheeb, Androu, Willing, Marcia, Zuccarelli, Britton, Kini, Usha, Newbury, Dianne F., Kleefstra, Tjitske, Reymond, Alexandre, Fisher, Simon E., and Vissers, Lisenka E.L.M.
- Published
- 2021
- Full Text
- View/download PDF
32. Dual copy number variants involving 16p11 and 6q22 in a case of childhood apraxia of speech and pervasive developmental disorder
- Author
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Newbury, Dianne F, Mari, Francesca, Sadighi Akha, Elham, MacDermot, Kay D, Canitano, Roberto, Monaco, Anthony P, Taylor, Jenny C, Renieri, Alessandra, Fisher, Simon E, and Knight, Samantha J L
- Published
- 2013
- Full Text
- View/download PDF
33. Increased prevalence of sex chromosome aneuploidies in specific language impairment and dyslexia
- Author
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SIMPSON, NUALA H, ADDIS, LAURA, BRANDLER, WILLIAM M, SLONIMS, VICKY, CLARK, ANN, WATSON, JOCELYNNE, SCERRI, THOMAS S, HENNESSY, ELIZABETH R, BOLTON, PATRICK F, CONTI-RAMSDEN, GINA, FAIRFAX, BENJAMIN P, KNIGHT, JULIAN C, STEIN, JOHN, TALCOTT, JOEL B, OʼHARE, ANNE, BAIRD, GILLIAN, PARACCHINI, SILVIA, FISHER, SIMON E, and NEWBURY, DIANNE F
- Published
- 2014
- Full Text
- View/download PDF
34. CMIP and ATP2C2 modulate phonological short-term memory in language impairment
- Author
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Newbury, Dianne F., Winchester, Laura, Addis, Laura, Paracchini, Silvia, Buckingham, Lyn-Louise, Clark, Ann, Cohen, Wendy, Cowie, Hilary, Dworzynski, Katharina, Everitt, Andrea, Goodyer, Ian M., Hennessy, Elizabeth, Kindley, A. David, Miller, Laura L., Nasir, Jamal, O'Hare, Anne, Shaw, Duncan, Simkin, Zoe, Simonoff, Emily, Slonims, Vicky, Watson, Jocelynne, Ragoussis, Jiannis, Fisher, Simon E., Seckl, Jonathon R., Helms, Peter J., Bolton, Patrick F., Pickles, Andrew, Conti-Ramsden, Gina, Baird, Gillian, Bishop, Dorothy V.M., and Monaco, Anthony P.
- Subjects
Language disorders -- Genetic aspects ,Language disorders -- Research ,Short-term memory -- Genetic aspects ,Calcium-transporting ATPases -- Research ,Human genome -- Research ,Biological sciences - Abstract
A high-density screen of SLI1region of chromosome 16q associated with phonological short-term memory in the specific language impairment (SLI) developmental disorder is conducted to identify its causative genes. Results suggest that variants in CMIP, a gene encoding c-maf-inducing protein and ATP2C2, a gene encoding calcium-transporting ATPase, type 2C, member2 protein, located in the SLI1 region modulate phonological short-term memory in SLI.
- Published
- 2009
35. Analysis of expression Quantitative Trait Loci for NLGN4X in relation to language and neurodevelopmental function: an exploratory analysis using FUSION and GTEx workflows
- Author
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Simpson, Nuala H., primary, Bishop, Dorothy V.M., additional, and Newbury, Dianne F., additional
- Published
- 2021
- Full Text
- View/download PDF
36. Genome-Wide Association Study of Motor Coordination
- Author
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Mountford, Hayley S., primary, Hill, Amanda, additional, Barnett, Anna L., additional, and Newbury, Dianne F., additional
- Published
- 2021
- Full Text
- View/download PDF
37. Stage 2 Registered Report: Variation in neurodevelopmental outcomes in children with sex chromosome trisomies: testing the double hit hypothesis
- Author
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Newbury, Dianne F., primary, Simpson, Nuala H., additional, Thompson, Paul A., additional, and Bishop, Dorothy V. M., additional
- Published
- 2021
- Full Text
- View/download PDF
38. A functional genetic link between distinct developmental language disorders
- Author
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Vernes, Sonja C. and Newbury, Dianne F.
- Subjects
Language disorders -- Research ,Language disorders -- Genetic aspects - Abstract
A study was conducted to establish the relationship between the FOXP2 gene and the development of speech and language disorders. Results indicate that the FOXP2-CNTNAP2 does provide a link to speech and language defects.
- Published
- 2008
39. Mutation-specific pathophysiological mechanisms define different neurodevelopmental disorders associated with SATB1 dysfunction
- Author
-
den Hoed, Joery, de Boer, Elke, Voisin, N, Dingemans, A, Guex, N, Wiel, L, Nellaker, C, Amudhavalli, S, Banka, S, Bena, F, Ben-Zeev, B, Bonagura, V, Bruel, A, Brunet, T, Brunner, H. G., Chew, H. B., Chrast, J., Cimbalistienė, Loreta, Coon, Hilary, study, The DDD, Délot, Emmanuèlle C, Démurger, Florence, Denommé-Pichon, Anne-Sophie, Depienne, C., Donnai, Dian, Dyment, David A, Elpeleg, Orly, Faivre, L, Gilissen, Christian, Granger, L., Haber, Benjamin, Hachiya, Yasuo, Abedi, Yasmin Hamzavi, Hanebeck, Jennifer, Hehir-Kwa, Jayne Y, Horist, Brooke, Itai, Toshiyuki, Jackson, Adam, Jewell, Rosalyn, Jones, Kelly L., Joss, Shelagh, Kashii, Hirofumi, Kato, Mitsuhiro, Kattentidt-Mouravieva, Anja A, Kok, Fernando, Kotzaeridou, Urania, Krishnamurthy, Vidya, Kučinskas, Vaidutis, Kuechler, Alma, Lavillaureix, Alinoë, Liu, Pengfei, Manwaring, Linda, Matsumoto, Naomichi, Mazel, Benoît, McWalter, Kirsty, Meiner, Vardiella, Mikati, Mohamad A., Miyatake, Satoko, Mizuguchi, Takeshi, Moey, Lip H., Mohammed, Shehla, Mor-Shaked, Hagar, Mountford, Hayley, Newbury-Ecob, Ruth, Odent, Sylvie, Orec, Laura, Osmond, Matthew, Palculict, Timothy Blake, Parker, Michael, Petersen, Andrea K., Pfundt, Rolph, Preikšaitienė, Eglė, Radtke, Kelly, Ranza, Emmanuelle, Rosenfeld, Jill A., Santiago-Sim, Teresa, Schwager, Caitlin, Sinnema, Margje, Blok, Lot Snijders, Spillmann, Rebecca C., Stegmann, Alexander P A, Thiffault, Isabelle, Tran, Linh, Vaknin-Dembinsky, Adi, Vedovato-dos-Santos, Juliana H., Schrier Vergano, Samantha A., Vilain, Eric, Vitobello, Antonio, Wagner, Matias, Waheeb, Androu, Willing, Marcia C., Zuccarelli, Britton D, Kini, Usha, Newbury, Dianne F., Kleefstra, Tjitske, Reymond, Alexandre, Fisher, Simon E., and Vissers, Lisenka E L M
- Abstract
Whereas large-scale statistical analyses can robustly identify disease-gene relationships, they do not accurately capture genotype-phenotype correlations or disease mechanisms. We use multiple lines of independent evidence to show that different variant types in a single gene, SATB1, cause clinically overlapping but distinct neurodevelopmental disorders. Clinical evaluation of 42 individuals carrying SATB1 variants identified overt genotype-phenotype relationships, associated with different pathophysiological mechanisms, established by functional assays. Missense variants in the CUT1 and CUT2 DNA-binding domains result in stronger chromatin binding, increased transcriptional repression and a severe phenotype. Contrastingly, variants predicted to result in haploinsufficiency are associated with a milder clinical presentation. A similarly mild phenotype is observed for individuals with premature protein truncating variants that escape nonsense-mediated decay and encode truncated proteins, which are transcriptionally active but mislocalized in the cell. Our results suggest that in-depth mutation-specific genotype-phenotype studies are essential to capture full disease complexity and to explain phenotypic variability.
- Published
- 2020
- Full Text
- View/download PDF
40. A rare missense variant in the ATP2C2 gene is associated with language impairment and related measures
- Author
-
Martinelli, Angela, Rice, Mabel, Talcott, Joel B, Diaz, Rebeca, Smith, Shelley, Raza, Muhammad Hashim, Snowling, Margaret J, Hulme, Charles, Stein, John, Hayiou-Thomas, Marianna E, Hawi, Ziarih, Kent, Lindsey, Pitt, Samantha J, Newbury, Dianne F, Paracchini, Silvia, Martinelli, Angela, Rice, Mabel, Talcott, Joel B, Diaz, Rebeca, Smith, Shelley, Raza, Muhammad Hashim, Snowling, Margaret J, Hulme, Charles, Stein, John, Hayiou-Thomas, Marianna E, Hawi, Ziarih, Kent, Lindsey, Pitt, Samantha J, Newbury, Dianne F, and Paracchini, Silvia
- Abstract
At least 5% of children present unexpected difficulties in expressing and understanding spoken language. This condition is highly heritable and often co-occurs with other neurodevelopmental disorders such as dyslexia and ADHD. Through an exome sequencing analysis, we identified a rare missense variant (chr16:84405221, GRCh38.p12) in the ATP2C2 gene. ATP2C2 was implicated in language disorders by linkage and association studies, and exactly the same variant was reported previously in a different exome sequencing study for language impairment (LI). We followed up this finding by genotyping the mutation in cohorts selected for LI and comorbid disorders. We found that the variant had a higher frequency in LI cases (1.8%, N = 360) compared with cohorts selected for dyslexia (0.8%, N = 520) and ADHD (0.7%, N = 150), which presented frequencies comparable to reference databases (0.9%, N = 24 046 gnomAD controls). Additionally, we observed that carriers of the rare variant identified from a general population cohort (N = 42, ALSPAC cohort) presented, as a group, lower scores on a range of reading and language-related measures compared to controls (N = 1825; minimum P = 0.002 for non-word reading). ATP2C2 encodes for an ATPase (SPCA2) that transports calcium and manganese ions into the Golgi lumen. Our functional characterization suggested that the rare variant influences the ATPase activity of SPCA2. Thus, our results further support the role of ATP2C2 locus in language-related phenotypes and pinpoint the possible effects of a specific rare variant at molecular level.
- Published
- 2021
41. Peripheral anomalies in USH2A cause central auditory anomalies in a mouse model of Usher syndrome and CAPD
- Author
-
Perrino, Peter A., Newbury, Dianne F., Fitch, R. Holly, Perrino, Peter A., Newbury, Dianne F., and Fitch, R. Holly
- Abstract
Central auditory processing disorder (CAPD) is associated with difficulties hearing and processing acoustic information, as well as subsequent impacts on the development of higher-order cognitive processes (i.e., attention and language). Yet CAPD also lacks clear and consistent diagnostic criteria, with widespread clinical disagreement on this matter. As such, identification of biological markers for CAPD would be useful. A recent genome association study identified a potential CAPD risk gene, USH2A. In a homozygous state, this gene is associated with Usher syndrome type 2 (USH2), a recessive disorder resulting in bilateral, high-frequency hearing loss due to atypical cochlear hair cell development. However, children with heterozygous USH2A mutations have also been found to show unexpected low-frequency hearing loss and reduced early vocabulary, contradicting assumptions that the heterozygous (carrier) state is “phenotype free”. Parallel evidence has confirmed that heterozygous Ush2a mutations in a transgenic mouse model also cause low-frequency hearing loss (Perrino et al., 2020). Importantly, these auditory processing anomalies were still evident after covariance for hearing loss, suggesting a CAPD profile. Since usherin anomalies occur in the peripheral cochlea and not central auditory structures, these findings point to upstream developmental feedback effects of peripheral sensory loss on high-level processing characteristic of CAPD. In this study, we aimed to expand upon the mouse behavioral battery used in Perrino et al. (2020) by evaluating central auditory brain structures, including the superior olivary complex (SOC) and medial geniculate nucleus (MGN), in heterozygous and homozygous Ush2a mice. We found that heterozygous Ush2a mice had significantly larger SOC volumes while homozygous Ush2a had significantly smaller SOC volumes. Heterozygous mutations did not affect the MGN; however, homozygous Ush2a mutations resulted in a significant shift towards more s
- Published
- 2021
42. Genome wide association study of motor coordination
- Author
-
Mountford, Hayley S., Hill, Amanda, Barnett, Anna L., Newbury, Dianne F., Mountford, Hayley S., Hill, Amanda, Barnett, Anna L., and Newbury, Dianne F.
- Abstract
The ability to finely control our movement is key to the achieving many of the educational milestones and life-skills we develop throughout our lives. Despite the centrality of coordination to our early development, there is a vast gap in our understanding of the underlying biology. Like most complex traits, both genetics and environment influence motor coordination, however, the specific genes, early environmental risk factors and molecular pathways are unknown. Previous studies have shown that about 5% of school-age children experience unexplained difficulties with motor coordination. These children are said to have Developmental Coordination Disorder (DCD). For children with DCD, these motor coordination difficulties significantly impact their everyday life and learning. DCD is associated with poorer academic achievement, reduced quality of life, it can constrain career opportunities and increase the risk of mental health issues in adulthood. Despite the high prevalence of coordination difficulties, many children remain undiagnosed by healthcare professionals. Compounding under-diagnosis in the clinic, research into the etiology of DCD is severely underrepresented in the literature. Here we present the first genome-wide association study (GWAS) to examine the genetic basis of early motor coordination in the context of motor difficulties. Using data from the Avon Longitudinal Study of Parents and Children (ALSPAC) we generate a derived measure of motor coordination from four components of the Movement Assessment Battery for Children (MABC), providing an overall measure of coordination across the full range of ability. We perform the first genome-wide association analysis focused on motor coordination (N=4542). No single nucleotide polymorphisms (SNPs) met the threshold for genome-wide significance however 59 SNPs showed suggestive associations. Three regions contained multiple suggestively associated SNP, within five preliminary candidate genes: IQSEC1, LRCC1, SYN
- Published
- 2021
43. A rare missense variant in theATP2C2gene is associated with language impairment and related measures
- Author
-
Martinelli, Angela, primary, Rice, Mabel L, additional, Talcott, Joel B, additional, Diaz, Rebeca, additional, Smith, Shelley, additional, Raza, Muhammad Hashim, additional, Snowling, Margaret J, additional, Hulme, Charles, additional, Stein, John, additional, Hayiou-Thomas, Marianna E, additional, Hawi, Ziarih, additional, Kent, Lindsey, additional, Pitt, Samantha J, additional, Newbury, Dianne F, additional, and Paracchini, Silvia, additional
- Published
- 2021
- Full Text
- View/download PDF
44. A genomewide scan for loci involved in attention-deficit/ hyperactivity disorder
- Author
-
Fisher, Simon E., Francks, Clyde, McCracken, James T., McGough, James J., Marlow, Angela J., MacPhie, I. Laurence, Newbury, Dianne F., Crawford, Lori R., Palmer, Christina G.S., Woodward, J. Arthur, Del'Homme, Melissa, Cantwell, Dennis P., Nelson, Stanley F., Monaco, Anthony P., and Smalley, Susan L.
- Subjects
Genetic research -- Analysis ,Attention-deficit hyperactivity disorder -- Causes of ,Behavioral assessment -- Analysis ,Diseases -- Causes and theories of causation ,Heredity -- Genetic aspects ,Biological sciences - Published
- 2002
45. Peripheral Anomalies in USH2A Cause Central Auditory Anomalies in a Mouse Model of Usher Syndrome and CAPD
- Author
-
Perrino, Peter A., primary, Newbury, Dianne F., additional, and Fitch, R. Holly, additional
- Published
- 2021
- Full Text
- View/download PDF
46. A rare missense variant in the ATP2C2 gene is associated with language impairment and related measures
- Author
-
Martinelli, Angela, primary, Rice, Mabel, additional, Talcott, Joel B., additional, Diaz, Rebeca, additional, Smith, Shelley, additional, Raza, Muhammad Hashim, additional, Snowling, Margaret J., additional, Hulme, Charles, additional, Stein, John, additional, Hayiou-Thomas, Marianna E., additional, Hawi, Ziarih, additional, Kent, Lindsey, additional, Pitt, Samantha J., additional, Newbury, Dianne F., additional, and Paracchini, Silvia, additional
- Published
- 2021
- Full Text
- View/download PDF
47. Pathways from the early language and communication environment to literacy outcomes at the end of primary school; the roles of language development and social development
- Author
-
Gibson, Jenny L., primary, Newbury, Dianne F., additional, Durkin, Kevin, additional, Pickles, Andrew, additional, Conti-Ramsden, Gina, additional, and Toseeb, Umar, additional
- Published
- 2020
- Full Text
- View/download PDF
48. Generalized Structured Component Analysis in candidate gene association studies: applications and limitations
- Author
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Thompson, Paul A., primary, Bishop, Dorothy V. M., additional, Eising, Else, additional, Fisher, Simon E., additional, and Newbury, Dianne F., additional
- Published
- 2020
- Full Text
- View/download PDF
49. Stage 2 Registered Report: Variation in neurodevelopmental outcomes in children with sex chromosome trisomies: testing the double hit hypothesis
- Author
-
Newbury, Dianne F., primary, Simpson, Nuala H., additional, Thompson, Paul A., additional, and Bishop, Dorothy V. M., additional
- Published
- 2020
- Full Text
- View/download PDF
50. The Genetic Population Structure of Robinson Crusoe Island, Chile
- Author
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Mountford, Hayley S., primary, Villanueva, Pía, additional, Fernández, María Angélica, additional, Jara, Lilian, additional, De Barbieri, Zulema, additional, Carvajal-Carmona, Luis G., additional, Cazier, Jean-Baptiste, additional, and Newbury, Dianne F., additional
- Published
- 2020
- Full Text
- View/download PDF
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