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A new method is developed for three-dimensional (3D) reconstruction of multi-material objects using propagation-based X-ray phase-contrast tomography (PB-CT) with phase retrieval via the contrast transfer function (CTF) formalism. The approach differs from conventional PB-CT algorithms that apply phase retrieval on individual two-dimensional (2D) projections. Instead, this method involves performing phase retrieval to the CT-reconstructed volume in 3D. The CTF formalism is further extended to the cases of partially-coherent illumination and strongly absorbing samples. Simulated results demonstrate that the proposed post-reconstruction CTF method provides fast and stable phase retrieval, producing results equivalent to conventional pre-reconstruction 2D CTF phase retrieval. Moreover, it is shown that application can be highly localised to isolated objects of interest, without a significant loss of quality, thus leading to increased computational efficiency. Combined with the extended validity of the CTF to greater propagation distances, this method provides additional advantages over approaches based on the transport-of-intensity equation., Comment: 11 pages, 5 figures

It is proved that the width of a function and the width of the distribution of its values cannot be made arbitrarily small simultaneously. In the case of ergodic stochastic processes, an ensuing uncertainty relationship is demonstrated for the product of correlation length and variance. A closely related uncertainty principle is also established for the average degree of fourth-order coherence and the spatial width of modes of bosonic quantum fields. However, it is shown that, in the case of stochastic and quantum observables, certain non-classical states with sub-Poissonian statistics, such as for example photon number squeezed states in quantum optics, can overcome the "classical" noise-resolution uncertainty limit. The described uncertainty relationship, which is fundamentally different from the Heisenberg and related uncertainty principles, can define an upper limit for the information capacity of communication and imaging systems. It is expected to be useful in a variety of problems in classical and quantum physics., Comment: 12 pages, 1 figure, to be submitted to a journal

The following paper describes a method for three-dimensional (3D) reconstruction of multi-material objects based on propagation-based X-ray phase-contrast tomography (PB-CT) with phase retrieval using the homogenous form of the Transport-of-Intensity equation (TIE-Hom). Unlike conventional PB-CT algorithms that perform phase retrieval of individual projections, the described post-reconstruction phase-retrieval method is applied in 3D to a localised region of the CT-reconstructed volume. We demonstrate via numerical simulations the accuracy and noise characteristics of the method under a variety of experimental conditions, comparing it to both conventional absorption tomography and two-dimensional (2D) TIE-Hom phase retrieval applied to projection images. The results indicate that the 3D post-reconstruction method generally achieves a modest improvement in noise suppression over existing PB-CT methods. It is also shown that potentially large computational gains over projection-based phase retrieval for multi-material samples are possible. In particular, constraining phase retrieval to a localised 3D region of interest reduces the overall computational cost and eliminates the need for multiple CT reconstructions and global 2D phase retrieval operations for each material within the sample., Comment: 23 pages, 8 figures

A reciprocal relationship between the autocovariance of the light intensity in the source plane and in the far-field detector plane is presented in a form analogous to the classical van Cittert - Zernike theorem, but involving intensity correlation functions. A "classical" version of the reciprocity relationship is considered first, based on the assumption of circular Gaussian statistics of the complex amplitudes in the source plane. The result is consistent with the theory of Hanbury Brown - Twiss interferometry, but it is shown to be also applicable to estimation of the source size or the spatial resolution of the detector from the noise power spectrum of flat-field images. An alternative version of the van Cittert - Zernike theorem for intensity correlations is then derived for a quantized electromagnetic beam in a coherent state, which leads to Poisson statistics for the intrinsic intensity of the beam.

An uncertainty inequality is presented that establishes a lower limit for the product of the variance of the time-averaged intensity of a mode of a quantized electromagnetic field and the degree of its spatial localization. The lower limit is determined by the vacuum fluctuations within the volume corresponding to the width of the mode. This result also leads to a generalized form of the Heisenberg uncertainty principle for boson fields in which the lower limit for the product of uncertainties in the spatial and momentum localization of a mode is equal to the product of Planck's constant and a dimensionless functional which reflects the joint signal-to-noise ratio of the position and momentum of vacuum fluctuations in the region of the phase space occupied by the mode. Experimental X-ray synchrotron measurements provide an initial verification of the proposed theory in the case of Poisson statistics.

A simple model for image formation in linear shift-invariant systems is considered, in which both the detected signal and the noise variance are varying slowly compared to the point-spread function of the system. It is shown that within the constraints of this model, the square of the signal-to-noise ratio is always proportional to the "volume" of the spatial resolution unit. In the case of Poisson statistics, the ratio of these two quantities divided by the incident density of the imaging particles (e.g. photons) represents a dimensionless invariant of the imaging system, which was previously termed the intrinsic imaging quality. The relationship of this invariant to the notion of information capacity of communication and imaging systems, which was previously considered by Shannon, Gabor and others, is investigated. The results are then applied to a simple generic model of quantitative imaging of weakly scattering objects, leading to an estimate of the upper limit for the amount of information about the sample that can be obtained in such experiments. It is shown that this limit depends only on the total number of imaging particles incident on the sample, the average scattering coefficient, the size of the sample and the number of spatial resolution units.

Electroencephalography (EEG) has enjoyed considerable attention over the past century and has been applied for diagnosis of epilepsy, stroke, traumatic brain injury and other disorders where 3D localization of electrical activity in the brain is potentially of great diagnostic value. In this study we evaluate the precision and accuracy of spatial localization of electrical activity in the brain delivered by a popular reconstruction technique sLORETA applied to EEG data collected by two commonly used low-density headsets with 14 and 19 measurement channels, respectively. Numerical experiments were performed for a realistic head model obtained by segmentation of MRI images. The EEG source localization study was conducted with a simulated single active dipole, as well as with two spatially separated simultaneously active dipoles, as a function of dipole positions across the neocortex, with several different noise levels in the EEG signals registered on the scalp. The results indicate that while the reconstruction accuracy and precision of the sLORETA method are consistently high in the case of a single active dipole, even with the low-resolution EEG configurations considered in the present study, successful localization is much more problematic in the case of two simultaneously active dipoles. The quantitative analysis of the width of the reconstructed distributions of the electrical activity allows us to specify the lower bound for the spatial resolution of the sLORETA-based 3D source localization in the considered cases., Comment: 13 pages