26 results on '"Nelson Chong"'
Search Results
2. Validating a novel deterministic privacy-preserving record linkage between administrative & clinical data: applications in stroke research
- Author
-
Alisia Southwell, Susan Bronskill, Tom Gee, Brendan Behan, Susan Evans, Tom Mikkelsen, Elizabeth Theriault, Kirk Nylen, Shannon Lefaivre, Nelson Chong, Mahmoud Azimaee, Natasa Tusevljak, Douglas Lee, and Richard Swartz
- Subjects
data linkage ,stroke ,feasibility ,privacy ,personal health information ,Demography. Population. Vital events ,HB848-3697 - Abstract
Introduction Research data combined with administrative data provides a robust resource capable of answering unique research questions. However, in cases where personal health data are encrypted, due to ethics requirements or institutional restrictions, traditional methods of deterministic and probabilistic record linkages are not feasible. Instead, privacy-preserving record linkages must be used to protect patients' personal data during data linkage. Objectives To determine the feasibility and validity of a deterministic privacy preserving data linkage protocol using homomorphically encrypted data. Methods Feasibility was measured by the number of records that successfully matched via direct identifiers. Validity was measured by the number of records that matched with multiple indirect identifiers. The threshold for feasibility and validity were both set at 95%. The datasets shared a single, direct identifier (health card number) and multiple indirect identifiers (sex and date of birth). Direct identifiers were encrypted in both datasets and then transferred to a third-party server capable of linking the encrypted identifiers without decrypting individual records. Once linked, the study team used indirect identifiers to verify the accuracy of the linkage in the final dataset. Results With a combination of manual and automated data transfer in a sample of 8,128 individuals, the privacy-preserving data linkage took 36 days to match to a population sample of over 3.2 million records. 99.9% of the records were successfully matched with direct identifiers, and 99.8% successfully matched with multiple indirect identifiers. We deemed the linkage both feasible and valid. Conclusions As combining administrative and research data becomes increasingly common, it is imperative to understand options for linking data when direct linkage is not feasible. The current linkage process ensured the privacy and security of patient data and improved data quality. While the initial implementations required significant computational and human resources, increased automation keeps the requirements within feasible bounds.
- Published
- 2022
- Full Text
- View/download PDF
3. Describing the linkage between administrative social assistance and health care databases in Ontario, Canada
- Author
-
Claire de Oliveira, Evgenia Gatov, Laura Rosella, Simon Chen, Rachel Strauss, Mahmoud Azimaee, Elizabeth Paterno, Astrid Guttmann, Ministry of Children, Community and Social Services-ICES Working Group, Nelson Chong, Peter Ionescu, Sean Ji, Alexander Kopp, Annie Lan, Charlotte Ma, Miranda Pring, Priyanka Raj, Steven Ryan, Refik Saskin, and Fiona Wong
- Subjects
data linkage ,administrative social assistance data ,administrative health care data ,Ontario ,Demography. Population. Vital events ,HB848-3697 - Abstract
Background The linkage of records across administrative databases has become a powerful tool to increase information available to undertake research and analytics in a privacy protective manner. Objective The objective of this paper was to describe the data integration strategy used to link the Ontario Ministry of Children, Community and Social Services (MCCSS)-Social Assistance (SA) database with administrative health care data. Methods Deterministic and probabilistic linkage methods were used to link the MCCSS-SA database (2003-2016) to the Registered Persons Database, a population registry containing data on all individuals issued a health card number in Ontario, Canada. Linkage rates were estimated, and the degree of record linkage and representativeness of the dataset were evaluated by comparing socio-demographic characteristics of linked and unlinked records. Results There were a total of 2,736,353 unique member IDs in the MCCSS-SA database from the 1st January 2003 to 31st December 2016; 331,238 (12.1%) were unlinked (linkage rate = 87.9%). Despite 16 passes, most record linkages were obtained after 2 deterministic (76.2%) and 14 probabilistic passes (11.7%). Linked and unlinked samples were similar for most socio-demographic characteristics (i.e., sex, age, rural dwelling), except migrant status (non-migrant versus migrant) (standardized difference of 0.52). Linked and unlinked records were also different for SA program-specific characteristics, such as social assistance program, Ontario Works and Ontario Disability Support Program (standardized difference of 0.20 for each), data entry system, Service Delivery Model Technology only and both Service Delivery Model Technology and Social Assistance Management System (standardized difference of 0.53 and 0.52, respectively), and months on social assistance (standardized difference of 0.43). Conclusions Additional techniques to account for sub-optimal linkage rates may be required to address potential biases resulting from this data linkage. Nonetheless, the linkage between administrative social assistance and health care data will provide important findings on the social determinants of health.
- Published
- 2022
- Full Text
- View/download PDF
4. Modernization of Record Linkage At ICES
- Author
-
Mahmoud Azimaee, Nelson Chong, Charlotte Ma, Gordon Fehringer, Gangamma Kalappa, Nan Wang, Cheng Qian, and Marian Vermeulen
- Subjects
Demography. Population. Vital events ,HB848-3697 - Abstract
Introduction Probabilistic Record Linkage of large databases requires a substantial amount of time and resources, resulting in significant costs. In addition, the process is subject to error, particularly during manual grey area resolution of uncertain matched pairs. Objectives and Approach The objective of this semi-experimental desinged study was to compare the accuracy and efficiency of different record linkage approaches. Four different record linkage software packages were selected: AutoMatch, G-Link, SAS Data Quality (DataFlux) and LinxMart. A large data set with all required linkage variables (e.g., first and last name, date of birth and gender) and a common unique identifier with the ICES linkage spine (registry) was chosen to represent our ground truth. Four non-overlapping cohorts were randomly selected from this data source, representing small (n=10,000), medium (n=250,000) and large (n=5,000,000) data sets. Simulated errors were inserted into each cohort to represent a real linkage scenario. The smallest cohort was used to run a complete record linkage for each software package. Where the software allowed for manual grey area resolution, linkage was replicated by two different linkage analysts who were blinded to the simulated errors included in the data set. The time spent by each analyst on processing, programming and manual grey area resolution was recorded. The larger cohorts were used to measure accuracy and processing time taken by each of the software packages. In order to analyse possible errors, detailed output from each software package was generated to compare accepted and rejected pairs with our ground truth. Results This project is still ongoing. Evaluation of AutoMatch, G-Link and SAS Data Quality has largely been completed. The remaining analyses will be completed by August 2020. Conclusion / Implications The outcome of this project can inform the record linkage strategy at organizations and data centres such as ICES and help identify more efficient methods that preserve an acceptable level of accuracy for their needs.
- Published
- 2020
5. Unlocking First Nations health information through data linkage
- Author
-
Jennifer Walker, Evelyn Pyper, Carmen R Jones, Saba Khan, Nelson Chong, Dan Legge, Michael J Schull, and David Henry
- Subjects
Demography. Population. Vital events ,HB848-3697 - Abstract
Introduction The importance of Indigenous data sovereignty and Indigenous-led research processes is increasingly being recognized in Canada and internationally. For First Nations in Ontario, Canada, access to routinely-collected demographic and health systems data is critical to planning and measuring health status and outcomes in their populations. Linkage of this data with the Indian Register (IR), under First Nations data governance, has unlocked data for use by First Nations organizations and communities. Objectives To describe the linkage of the IR database to the Ontario Registered Persons Database (RPDB) within the context of Indigenous data sovereignty principles. Methods Deterministic and probabilistic record linkage methods were used to link the IR to the RPDB. There is no established population of First Nations people living in Ontario with which we could establish a linkage rate. Accordingly, several approaches were taken to determine a denominator that would represent the total population of First Nations we would hope to link to the RPDB. Results Overall, 201,678 individuals in the national IR database matched to Ontario health records by way of the RPDB, of which 98,562 were female and 103,116 were male. Of those First Nations individuals linked to the RPDB, 90.2% (n=181,915) lived in Ontario when they first registered with IR, or were affiliated with an Ontario First Nation Community. The proportion of registered First Nations people linking to the RPDB improved across time, from 62.8% in the 1960s to 94.5% in 2012. Conclusions This linkage of the IR and RPDB has resulted in the creation of the largest First Nations health research study cohort in Canada. The linked data are being used by First Nations communities to answer questions that ultimately promote wellbeing, effective policy, and healing.
- Published
- 2018
- Full Text
- View/download PDF
6. Describing the Linkages of the Citizenship and Immigration Canada Permanent Resident Data and Vital Statistics—Death Registry to Ontario’s Administrative Health Database
- Author
-
Astrid Guttmann, Maria Chiu, Michael Lebenbaum, Kelvin Lam, Nelson Chong, Mahmoud Azimaee, Karey Iron, and Doug Manuel
- Subjects
Demography. Population. Vital events ,HB848-3697 - Abstract
ABSTRACT Objectives Ontario, the most populous province in Canada, has a universal healthcare system that routinely collects health administrative data on its 13 million legal residents that is used for health research. Record linkage has become a vital tool for this research by enriching this data with the Immigration, Refugees and Citizenship Canada (IRCC) Permanent Resident database and the Office of the Registrar General’s Vital Statistics-Death (VSD) registry. Our objectives were to estimate linkage rates and compare characteristics of individuals in the linked versus unlinked files. Approach We used both deterministic and probabilistic linkage methods to link the IRCC database (1985-2012) and VSD registry (1990-2012) to the Ontario’s Registered Persons Database. Linkage rates were estimated and standardized differences were used to assess differences in socio-demographic and other characteristics between the linked and unlinked records. Results The overall linkage rates for the IRCC database and VSD registry were 86.4% and 96.2%, respectively. The majority (68.2%) of the record linkages in IRCC were achieved after the three deterministic passes with the remaining 18.2% being linked probabilistically. Similarly the majority (79.8%) of the record linkages in the ORGD were linked using deterministic record linkage and the remaining 16.3% were linked after probabilistic and manual review. Unlinked and linked files were similar for most characteristics, such as age and marital status for IRCC and sex and most causes of death for VSD. However, lower linkage rates were observed among people born in East Asia (78%) in the IRCC database and certain causes of death in the VSD registry, namely perinatal conditions (61.3%) and congenital anomalies (81.3%). Conclusion The linkages of immigration and vital statistics data to existing population-based healthcare data in Ontario, Canada will enable many novel cross-sectional and longitudinal studies to be conducted. Analytic techniques to account for sub-optimal linkage rates may be required in studies of certain ethnic groups or certain causes of death among children and infants.
- Published
- 2017
- Full Text
- View/download PDF
7. Privacy-Preserving Record Linkage: An international collaboration between Canada, Australia and Wales
- Author
-
Conrad Pow, Karey Iron, James Boyd, Adrian Brown, Simon Thompson, Nelson Chong, and Charlotte Ma
- Subjects
Demography. Population. Vital events ,HB848-3697 - Abstract
ABSTRACT Objectives Linkage of “big data” can provide the answers to a variety of health questions that benefit the delivery of patient care, impact of policies, system planning and evaluation. In some jurisdictions, legal and operational barriers may prevent data linkage for research and system evaluation. Collaboration between international research institutions in Canada, Australia and Wales was formed at the Farr Institute International Conference in 2015. This partnership will test privacy-preserving record linkage (PPRL) techniques for linkage accuracy on real datasets held in a Canadian data repository. Approach Bloom filter PPRL techniques have been incorporated into a prototype linkage system. Evaluations on probabilistic linkage using Bloom filters method have shown potential for large-scale record linkage, performing both accurately and efficiently under experimental conditions. The prototype will be used to evaluate the Bloom filter PPRL techniques in 3 phases. Phase 1: 3 tests using simulated data relating to 20 million individuals will be matched to a sub-cohort of 1 million individuals. Phase 2: 100,000 people from hospital inpatient records will be matched to 18 million people in a health system registration file. These tests will inform whether the method can achieve high levels of privacy protection without negatively impacting performance and linkage quality. Performance indicators include match rate and processing efficiency based on record volumes. Results Linkage quality will be assessed by the number of true matches and non matches identified as links and non-links. This method will be evaluated using synthetic and real-world datasets, where the true match status is known. Initial performance testing linked a file of 3,000 records to 30,000 with a 100% match result. Subsequent test phases as above will continue to be evaluated and these results will be presented. Conclusion Completion of the phased tests will confirm the ability to link datasets while preserving privacy. This international collaboration will expand the utility of this prototype linkage system and expand the global knowledge bank focusing on PPRL methods in general. It will also inform how to adapt to local requirements by providing a solution to many common legal and administrative challenges.
- Published
- 2017
- Full Text
- View/download PDF
8. Information Management at a Health Services Research Organization in Toronto, Ontario, Canada: Moving from Identifiable Data to Coded Data
- Author
-
Lisa Thurairasu and Nelson Chong
- Subjects
Demography. Population. Vital events ,HB848-3697 - Abstract
ABSTRACT Objectives A health services research organization in Toronto, Ontario, Canada conducts population-based research to improve the health of Canadians in seven main areas: (1) cancer, (2) cardiovascular disease, (3) chronic disease and pharmacology, (4) health system planning and evaluation, (5) kidney, dialysis and transplantation, (6) mental health and addictions, and (7) primary care and population health. The Information Management (IM) team within the Data Quality and Information Management (DQIM) department at our non-profit organization is an integral component for upholding privacy and confidentiality policies and procedures while facilitating quality research using different types of data such as health administrative, third-party, primary data collection, and electronic medical records (EMR). Methods The IM team is responsible for receiving data, encoding direct personal identifiers, screening for unnecessary identifiers, performing probabilistic data linkage when necessary, importing the data to the Research Analytics Environment (a client/server Linux-based system), and destroying the data according to the terms stipulated in the executed data sharing agreement. The purpose of the presentation is to detail the above steps of processing data to protect individuals’ identities yet preserve the usefulness of carrying out research. The presentation will include aspects from importing data into SAS to storage and encoding of personal identifiers to probabilistic data linkage, which involves maximizing linkage with other datasets at the organization. Linking data at the organization involves the encryption or encoding of health card numbers to “Key Numbers.” Results The processing practices used at the organization comply with Canadian privacy laws such as the Personal Health Information Protection Act (PHIPA) as well as organizational policies and Research Ethics Board approvals. The approaches used to conceal individual identities yet allow linkage to various data sources can be modelled by other health agencies, ministries, and non-health related organizations that work with sensitive data but face challenges in maintaining both privacy and research quality. Our organization strives to make processing as efficient as possible and create maximum linkability to the various data sources in house while upholding privacy and confidentiality.
- Published
- 2017
- Full Text
- View/download PDF
9. Creating a Powerful Platform to Explore Health in a Correctional Population: A Record Linkage Study.
- Author
-
Kathryn E McIsaac, Shanna Farrell MacDonald, Nelson Chong, Andrea Moser, Rahim Moineddin, Angela Colantonio, Avery Nathens, and Flora I Matheson
- Subjects
Medicine ,Science - Abstract
We used record linkage to create a data repository of health information of persons who were federally incarcerated in Ontario and Canada. We obtained records from 56,867 adults who were federally incarcerated between January 1, 1998 and December 31, 2011 from the Correctional Service of Canada; 15,248 records belonged to individuals residing in Ontario, Canada. We linked these records to the Registered Persons Database (RPDB) which contained records from 18,116,996 individuals eligible for health care in Ontario. Out of 56,867 OMS records, 22,844 (40.2%) were linked to the RPDB. Looking only at those incarcerated in Ontario, 98%, (14 953 of 15248) records were linked to RPDB. Most records of persons in Ontario-based facilities were linked deterministically. Linkage rates were lower for women, minority groups, and substance users. In conclusion, record linkage enabled the creation of a valuable data repository: there are no electronic medical records for correctional populations in Canada, making it more difficult to profile their health.
- Published
- 2016
- Full Text
- View/download PDF
10. DEN: Disentanglement and Enhancement Networks for Low Illumination Images.
- Author
-
Nelson Chong Ngee Bow, Vu-Hoang Tran, Punchok Kerdsiri, Yuen Peng Loh, and Ching-Chun Huang
- Published
- 2020
- Full Text
- View/download PDF
11. NTIRE 2019 Challenge on Image Enhancement: Methods and Results.
- Author
-
Andrey Ignatov, Radu Timofte, Xiaochao Qu, Xingguang Zhou, Ting Liu, Pengfei Wan, Syed Waqas Zamir, Aditya Arora, Salman H. Khan 0001, Fahad Shahbaz Khan, Ling Shao 0001, Dongwon Park, Se Young Chun, Pablo Navarrete Michelini, Hanwen Liu, Dan Zhu, Zhiwei Zhong, Xianming Liu, Junjun Jiang, Debin Zhao, Muhammad Haris 0002, Kazutoshi Akita, Tomoki Yoshida, Greg Shakhnarovich, Norimichi Ukita, Jie Liu 0042, Cheolkon Jung, Raimondo Schettini, Simone Bianco 0001, Claudio Cusano, Flavio Piccoli, Pengju Liu, Kai Zhang 0008, Jingdong Liu, Jiye Liu, Hongzhi Zhang, Wangmeng Zuo, Nelson Chong Ngee Bow, Lai-Kuan Wong, John See, Jinghui Qin, Lishan Huang, Yukai Shi, Pengxu Wei, Wushao Wen, Liang Lin, Zheng Hui, Xiumei Wang, Xinbo Gao 0001, Kanti Kumari, Vikas Kumar Anand, Mahendra Khened, and Ganapathy Krishnamurthi
- Published
- 2019
- Full Text
- View/download PDF
12. GANmera: Reproducing Aesthetically Pleasing Photographs Using Deep Adversarial Networks.
- Author
-
Nelson Chong, Lai-Kuan Wong, and John See
- Published
- 2019
- Full Text
- View/download PDF
13. Describing the linkages of the immigration, refugees and citizenship Canada permanent resident data and vital statistics death registry to Ontario's administrative health database.
- Author
-
Maria Chiu, Michael Lebenbaum, Kelvin Lam, Nelson Chong, Mahmoud Azimaee, Karey Iron, Douglas G. Manuel, and Astrid Guttmann
- Published
- 2016
- Full Text
- View/download PDF
14. Pilot study of the ability to probabilistically link clinical trial patients to administrative data and determine long-term outcomes
- Author
-
Dongsheng Tu, Lei Han, Joseph L. Pater, Erin N Bell, Elyse Corn, Christopher J. O'Callaghan, Craig C. Earle, Ximena Camacho, Nelson Chong, and Annette E. Hay
- Subjects
Pharmacology ,medicine.medical_specialty ,business.industry ,Long term follow up ,General Medicine ,01 natural sciences ,Clinical trial ,010104 statistics & probability ,03 medical and health sciences ,0302 clinical medicine ,Long term outcomes ,Medicine ,030212 general & internal medicine ,0101 mathematics ,business ,Intensive care medicine ,Data Linkage - Abstract
Background Clinical trials are important but extremely costly. Utilization of routinely collected administrative data may simplify and enhance clinical trial data collection. Purpose The aim of this study was to test the feasibility of use of administrative databases in Ontario, Canada, for long-term clinical trial follow-up, specifically (a) to determine whether limited patient identifiers held by the Canadian Cancer Trials Group can be used to probabilistically link with individuals in the Institute for Clinical Evaluative Sciences databases and if so, (b) the level of concordance between the two data sets. Methods This retrospective study was conducted through collaboration of established health service (Institute for Clinical Evaluative Sciences) and clinical trial (Canadian Cancer Trials Group) research groups in the province of Ontario, Canada, where healthcare is predominantly funded by the government. Adults with pre-treated metastatic colorectal cancer previously enrolled in the Canadian Cancer Trials Group CO.17 and CO.20 randomized phase III trials were included, limited to those in Ontario. The main outcomes were rate of successful probabilistic linkage and concordance of survival data, stated a priori. Results Probabilistic linkage was successful in 266/293 (90.8%) participants. In those patients for whom linkage was successful, the Canadian Cancer Trials Group (trial) and the Institute for Clinical Evaluative Sciences (administrative) data sets were concordant with regard to the occurrence of death during the period of clinical trial follow-up in 206/209 (98.6%). Death was recorded in the Institute for Clinical Evaluative Sciences, but not the Canadian Cancer Trials Group, for 57 cases, where the event occurred after the clinical trial cut-off dates. The recorded date of death matched closely between both databases. During the period of clinical trial conduct, administrative databases contained details of hospitalizations and emergency room visits not captured in the clinical trial electronic database. Conclusion Prospective use of administrative data could enhance clinical trial data collection, both for long-term follow-up and resource utilization for economic analyses and do so less expensively than current primary data collection. Recording a unique identifier (e.g. health insurance number) in trial databases would allow deterministic linkage for all participants.
- Published
- 2018
- Full Text
- View/download PDF
15. DEN: Disentanglement and Enhancement Networks for Low Illumination Images
- Author
-
Ngee Bow, Nelson Chong, primary, Tran, Vu-Hoang, additional, Kerdsiri, Punchok, additional, Loh, Yuen Peng, additional, and Huang, Ching-Chun, additional
- Published
- 2020
- Full Text
- View/download PDF
16. NTIRE 2019 challenge on image enhancement: Methods and results
- Author
-
Ling Shao, Liang Lin, Flavio Piccoli, Xingguang Zhou, Dongwon Park, Syed Waqas Zamir, Lai-Kuan Wong, Greg Shakhnarovich, Cheolkon Jung, Hongzhi Zhang, Andrey Ignatov, Xiaochao Qu, Pengxu Wei, Zhiwei Zhong, Zheng Hui, Kazutoshi Akita, Jinghui Qin, Xinbo Gao, Pablo Navarrete Michelini, Wushao Wen, Jingdong Liu, Radu Timofte, Jie Liu, Jiye Liu, Salman Khan, Norimichi Ukita, Hanwen Liu, Wangmeng Zuo, Muhammad Haris, Yukai Shi, Debin Zhao, Fahad Shahbaz Khan, Pengfei Wan, Ganapathy Krishnamurthi, Xianming Liu, Se Young Chun, Simone Bianco, Tomoki Yoshida, Ting Liu, Xiumei Wang, Kai Zhang, Junjun Jiang, Claudio Cusano, John See, Nelson Chong Ngee Bow, Lishan Huang, Pengju Liu, Raimondo Schettini, Mahendra Khened, Kanti Kumari, Aditya Arora, Vikas Kumar Anand, Dan Zhu, Ignatov, A, Timofte, R, Qu, X, Zhou, X, Liu, T, Wan, P, Zamir, S, Arora, A, Khan, S, Khan, F, Shao, L, Park, D, Chun, S, Michelini, P, Liu, H, Zhu, D, Zhong, Z, Liu, X, Jiang, J, Zhao, D, Haris, M, Akita, K, Yoshida, T, Shakhnarovich, G, Ukita, N, Liu, J, Jung, C, Schettini, R, Bianco, S, Cusano, C, Piccoli, F, Liu, P, Zhang, K, Zhang, H, Zuo, W, Bow, N, Wong, L, See, J, Qin, J, Huang, L, Shi, Y, Wei, P, Wen, W, Lin, L, Hui, Z, Wang, X, Gao, X, Kumari, K, Anand, V, Khened, M, and Krishnamurthi, G
- Subjects
0209 industrial biotechnology ,Computer science ,Image quality ,Structural similarity ,business.industry ,media_common.quotation_subject ,image enhancement, image quality, tone adjustment, cameras, smartphones, task analysis, visualization, computer vision ,ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION ,02 engineering and technology ,Visualization ,Image (mathematics) ,020901 industrial engineering & automation ,Perception ,Metric (mathematics) ,0202 electrical engineering, electronic engineering, information engineering ,Contrast (vision) ,020201 artificial intelligence & image processing ,Computer vision ,Artificial intelligence ,business ,Focus (optics) ,Image resolution ,media_common - Abstract
This paper reviews the first NTIRE challenge on perceptual image enhancement with the focus on proposed solutions and results. The participating teams were solving a real-world photo enhancement problem, where the goal was to map low-quality photos from the iPhone 3GS device to the same photos captured with Canon 70D DSLR camera. The considered problem embraced a number of computer vision subtasks, such as image denoising, image resolution and sharpness enhancement, image color/contrast/exposure adjustment, etc. The target metric used in this challenge combined PSNR and SSIM scores with solutions' perceptual results measured in the user study. The proposed solutions significantly improved baseline results, defining the state-of-the-art for practical image enhancement.
- Published
- 2019
17. Unlocking First Nations health information through data linkage
- Author
-
David Henry, Saba Khan, Evelyn Pyper, Michael J. Schull, Nelson Chong, Carmen R. Jones, Dan Legge, and Jennifer D. Walker
- Subjects
Economic growth ,education.field_of_study ,Information Systems and Management ,Population ,Health Informatics ,Context (language use) ,Linked data ,030204 cardiovascular system & hematology ,Indigenous ,Data governance ,03 medical and health sciences ,0302 clinical medicine ,Geography ,Sovereignty ,lcsh:HB848-3697 ,Cohort ,lcsh:Demography. Population. Vital events ,030212 general & internal medicine ,education ,Record linkage ,Population Data Science ,Information Systems ,Demography - Abstract
IntroductionThe importance of Indigenous data sovereignty and Indigenous-led research processes is increasingly being recognized in Canada and internationally. For First Nations in Ontario, Canada, access to routinely-collected demographic and health systems data is critical to planning and measuring health status and outcomes in their populations. Linkage of this data with the Indian Register (IR), under First Nations data governance, has unlocked data for use by First Nations organizations and communities. ObjectivesTo describe the linkage of the IR database to the Ontario Registered Persons Database (RPDB) within the context of Indigenous data sovereignty principles. MethodsDeterministic and probabilistic record linkage methods were used to link the IR to the RPDB. There is no established population of First Nations people living in Ontario with which we could establish a linkage rate. Accordingly, several approaches were taken to determine a denominator that would represent the total population of First Nations we would hope to link to the RPDB. ResultsOverall, 201,678 individuals in the national IR database matched to Ontario health records by way of the RPDB, of which 98,562 were female and 103,116 were male. Of those First Nations individuals linked to the RPDB, 90.2% (n=181,915) lived in Ontario when they first registered with IR, or were affiliated with an Ontario First Nation Community. The proportion of registered First Nations people linking to the RPDB improved across time, from 62.8% in the 1960s to 94.5% in 2012. Conclusions This linkage of the IR and RPDB has resulted in the creation of the largest First Nations health research study cohort in Canada. The linked data are being used by First Nations communities to answer questions that ultimately promote wellbeing, effective policy, and healing.
- Published
- 2018
18. NTIRE 2019 Challenge on Image Enhancement: Methods and Results
- Author
-
Ignatov, Andrey, primary, Timofte, Radu, additional, Qu, Xiaochao, additional, Zhou, Xingguang, additional, Liu, Ting, additional, Wan, Pengfei, additional, Zamir, Syed Waqas, additional, Arora, Aditya, additional, Khan, Salman, additional, Khan, Fahad Shahbaz, additional, Shao, Ling, additional, Park, Dongwon, additional, Chun, Se Young, additional, Michelini, Pablo Navarrete, additional, Liu, Hanwen, additional, Zhu, Dan, additional, Zhong, Zhiwei, additional, Liu, Xianming, additional, Jiang, Junjun, additional, Zhao, Debin, additional, Haris, Muhammad, additional, Akita, Kazutoshi, additional, Yoshida, Tomoki, additional, Shakhnarovich, Greg, additional, Ukita, Norimichi, additional, Liu, Jie, additional, Jung, Cheolkon, additional, Schettini, Raimondo, additional, Bianco, Simone, additional, Cusano, Claudio, additional, Piccoli, Flavio, additional, Liu, Pengju, additional, Zhang, Kai, additional, Liu, Jingdong, additional, Liu, Jiye, additional, Zhang, Hongzhi, additional, Zuo, Wangmeng, additional, Bow, Nelson Chong Ngee, additional, Wong, Lai-Kuan, additional, See, John, additional, Qin, Jinghui, additional, Huang, Lishan, additional, Shi, Yukai, additional, Wei, Pengxu, additional, Wen, Wushao, additional, Lin, Liang, additional, Hui, Zheng, additional, Wang, Xiumei, additional, Gao, Xinbo, additional, Kumari, Kanti, additional, Anand, Vikas Kumar, additional, Khened, Mahendra, additional, and Krishnamurthi, Ganapathy, additional
- Published
- 2019
- Full Text
- View/download PDF
19. Creating a Powerful Platform to Explore Health in a Correctional Population: A Record Linkage Study
- Author
-
Andrea E. Moser, Nelson Chong, Kathryn E. McIsaac, Rahim Moineddin, Flora I. Matheson, Shanna Farrell MacDonald, Avery B. Nathens, and Angela Colantonio
- Subjects
Male ,Medical Doctors ,Databases, Factual ,Health Care Providers ,Health Status ,lcsh:Medicine ,Social Sciences ,Geographical locations ,Drug Abuse ,0302 clinical medicine ,Health care ,Medicine and Health Sciences ,Psychology ,Public and Occupational Health ,030212 general & internal medicine ,lcsh:Science ,Ontario ,education.field_of_study ,Multidisciplinary ,Alcohol Consumption ,Medical record ,Middle Aged ,3. Good health ,Substance abuse ,Alcoholism ,Professions ,Health Records, Personal ,Female ,Medical Record Linkage ,0305 other medical science ,Information Technology ,Alcohol consumption ,Record linkage ,Research Article ,Adult ,medicine.medical_specialty ,Canada ,Computer and Information Sciences ,Substance-Related Disorders ,Population ,Addiction ,03 medical and health sciences ,Databases ,Environmental health ,Physicians ,Mental Health and Psychiatry ,medicine ,Humans ,education ,Demography ,Nutrition ,Behavior ,030505 public health ,business.industry ,Prisoners ,lcsh:R ,Biology and Life Sciences ,medicine.disease ,Diet ,Health Care ,Family medicine ,Prisons ,North America ,lcsh:Q ,Population Groupings ,Health information ,Record Linkage Study ,People and places ,business - Abstract
We used record linkage to create a data repository of health information of persons who were federally incarcerated in Ontario and Canada. We obtained records from 56,867 adults who were federally incarcerated between January 1, 1998 and December 31, 2011 from the Correctional Service of Canada; 15,248 records belonged to individuals residing in Ontario, Canada. We linked these records to the Registered Persons Database (RPDB) which contained records from 18,116,996 individuals eligible for health care in Ontario. Out of 56,867 OMS records, 22,844 (40.2%) were linked to the RPDB. Looking only at those incarcerated in Ontario, 98%, (14 953 of 15248) records were linked to RPDB. Most records of persons in Ontario-based facilities were linked deterministically. Linkage rates were lower for women, minority groups, and substance users. In conclusion, record linkage enabled the creation of a valuable data repository: there are no electronic medical records for correctional populations in Canada, making it more difficult to profile their health.
- Published
- 2016
20. Assessment of coronary heart disease morbidity and mortality after radiation therapy for early breast cancer
- Author
-
Pamela S. Douglas, Katherine A. Vallis, Nelson Chong, Eric J. Holowaty, Peter Kirkbride, Melania Pintilie, and Andreas Wielgosz
- Subjects
Adult ,Cancer Research ,medicine.medical_specialty ,medicine.medical_treatment ,Mammary gland ,Myocardial Infarction ,Breast Neoplasms ,Risk Assessment ,Functional Laterality ,Cohort Studies ,Breast cancer ,Internal medicine ,medicine ,Humans ,Myocardial infarction ,Radiation Injuries ,Aged ,Radiotherapy ,business.industry ,Incidence (epidemiology) ,Incidence ,Middle Aged ,medicine.disease ,Surgery ,Radiation therapy ,medicine.anatomical_structure ,Oncology ,Female ,Morbidity ,Complication ,Risk assessment ,business ,Cohort study - Abstract
PURPOSE: To assess the risk of fatal and nonfatal myocardial infarction (MI) after breast-conserving surgery (BCS) and radiation therapy (RT) for left-sided breast cancer. PATIENTS AND METHODS: A hospital-based retrospective cohort linkage study of all breast cancer patients registered at the Princess Margaret Hospital (PMH), Toronto, Canada, between 1982 and 1988 who were treated with postlumpectomy RT was performed. Available identifiers for the study cohort were linked to two province-wide health files: the Canadian Institute for Health Information Hospitalization File and the Ontario Mortality Database. Admissions to hospital for MI and deaths attributable to MI were identified. The relevant original health records were abstracted to verify the diagnosis of MI according to diagnostic criteria used in the World Health Organization multinational monitoring of trends and determinants in cardiovascular disease (MONICA) project. We compared incidence of MI in the study cohort with the general population and incidence of MI after therapy for left- versus right-sided breast cancer. RESULTS: A cohort of 2,128 patients was identified. The median length of follow-up was 10.2 years. The incidence of MI in the study cohort was comparable to that in an age-matched general population of women in Ontario. There were 70 coronary events among 56 patients after breast irradiation. According to MONICA criteria, 53 and six events were characterized as definite and possible MIs, respectively. Eleven events did not satisfy MONICA criteria for MI. Twenty-six patients treated for left-sided and 23 patients treated for right-sided breast cancer experienced at least one definite or possible MI (log-rank test, P = .66). There were eight fatal MIs among the left-sided group and six among the right-sided group. There was no excess of other cardiac diseases among patients who received left-sided radiotherapy compared to the right-sided group. CONCLUSION: We have found no evidence for excess morbidity and mortality from coronary artery disease among women treated with RT to the left breast after BCS at 10.2 years of follow-up. Longer follow-up is required to confirm that excess cardiac disease has been completely avoided.
- Published
- 2016
- Full Text
- View/download PDF
21. Factors associated with wait times across the breast cancer treatment pathway in Ontario
- Author
-
Rene Shumak, Anna M. Chiarelli, Maegan V. Prummel, Frances P. O'Malley, Claire M. B. Holloway, Amalia Plotogea, Lucia Mirea, and Nelson Chong
- Subjects
medicine.medical_specialty ,Chemotherapy ,Pathology ,Multidisciplinary ,Radiotherapy ,business.industry ,medicine.medical_treatment ,Research ,Postoperative radiotherapy ,Logistic regression ,medicine.disease ,Wait time ,Radiation therapy ,Breast cancer ,Treatment wait time ,Interquartile range ,Internal medicine ,medicine ,Surgery ,Stage (cooking) ,Demographic factors ,business - Abstract
Background Longer times from diagnosis to breast cancer treatment are associated with poorer prognosis. This study examined factors associated with wait times by phase in the breast cancer treatment pathway. Methods There were 1760 women eligible for the study, aged 50–69 diagnosed in Ontario with invasive breast cancer from 1995–2003. Multivariate logistic regression examined factors associated with greater than median wait times for each phase of the treatment pathway; from diagnosis to definitive surgery; from final surgery to radiotherapy without chemotherapy and from final surgery to chemotherapy. Results The median wait times were 17 days (Inter Quartile Range (IQR) = 0–31) from diagnosis to definitive surgery, 44 days (IQR = 34–56) from final surgery to postoperative chemotherapy and 75 days (IQR = 57–97) from final surgery to postoperative radiotherapy. Diagnosis during 2000–2003 compared to 1995–1999 was associated with significantly longer wait times for each phase of the treatment pathway. Higher income quintile was associated with longer wait time from diagnosis to surgery (OR = 1.47, 95% CI = 1.05-2.06) and shorter wait times from final surgery to radiotherapy (OR = 0.60, 95% CI = 0.37-0.96). Greater stage at diagnosis was associated with shorter wait times from diagnosis to definitive surgery (stage III vs I: OR = 0.49, 95% CI = 0.34-0.71). Conclusions While diagnosis during the latter part of the study period was associated with significantly longer wait times for all phases of the treatment pathway, there were variations in the associations of stage and income quintile with wait times by treatment phase. Continued assessment of factors associated with wait times across the breast cancer treatment pathway is important, as they indicate areas to be targeted for quality improvement with the ultimate goal of improving prognosis.
- Published
- 2013
22. Favourable prognostic factors of subsequent screen-detected breast cancers among women aged 50-69
- Author
-
Lucia Mirea, Frances P Oʼmalley, Amanda J. Sheppard, Lawrence Paszat, Sarah A. Edwards, Nelson Chong, Rene Shumak, and Anna M. Chiarelli
- Subjects
Oncology ,Cancer Research ,medicine.medical_specialty ,Time Factors ,Epidemiology ,Breast Neoplasms ,Logistic regression ,Risk Factors ,Internal medicine ,medicine ,Mammography ,Humans ,Mass Screening ,Stage (cooking) ,Mass screening ,Early Detection of Cancer ,Randomized Controlled Trials as Topic ,medicine.diagnostic_test ,Screen detected ,business.industry ,Public Health, Environmental and Occupational Health ,Odds ratio ,Middle Aged ,Prognosis ,Confidence interval ,Cohort ,Female ,business - Abstract
Most studies reporting more favourable biological features of screen-detected breast cancers compared with symptomatic or interval cancers include initial or prevalent screens and therefore may not indicate the real benefit of screening on breast cancer mortality. We conducted case-case comparisons within a cohort of eligible women (N=771 715) who were aged 50-69 between 1 January 1995 and 31 December 2003. A randomly selected sample of breast cancers (N=1848) diagnosed among these women were compared by detection method. Tumour characteristics of interval cancers (N=362) diagnosed after 6-24 months of a negative screen or symptomatic breast cancers (N=491) were compared with subsequent screen-detected breast cancers diagnosed within 6 months of a positive screen (N=995) using polytomous logistic regression. Tumours were evaluated for clinical presentation, histology and expression of hormone receptors. Women with symptomatic detected [odds ratio (OR)=7.48, 95% confidence interval (CI)=5.38-10.38] and interval cancers (OR=2.20, 95% CI=1.56-3.10) were more often diagnosed at stage III-IV versus I than women with rescreen-detected cancers. After adjusting for tumour size, women with symptomatic cancers had tumours of higher grade (OR=1.50, 95% CI=1.05-2.15) and mitotic score (OR=1.69, 95% CI=1.15-2.49) and women with interval cancers had tumours of higher mitotic score (OR=1.52, 95% CI=1.01-2.28) compared with women diagnosed at screening. Subsequent screen-detected cancers are not only detected at an earlier stage but are also less aggressive, leading to a better prognosis. As long-term mortality reduction for breast screening may depend on subsequent screens, our study indicates that mammography screening can be effective in women aged 50-69.
- Published
- 2012
23. Breast cancer found at the time of breast reduction
- Author
-
Christine L. Tang, Mitchell H. Brown, Ronald Levine, Margaret Sloan, Nelson Chong, and Eric Holowaty
- Subjects
Mammaplasty ,Humans ,Surgery ,Breast Neoplasms ,Female ,Middle Aged - Abstract
In a recent study involving 27,500 women who had breast reduction surgery in Ontario, Canada, 17 women who were diagnosed as having breast cancer at the time of their breast reduction surgery were identified. The aims of this study were to (1) describe a population-based series of patients who had breast cancer diagnosed at the time of breast reduction, (2) describe the treatment of these cancers, and (3) compare their survival rate with survival in patients in the general population who had breast cancer. Information about these women, their treatment, and outcome was extracted from hospital records, pathology reports, and reports from regional cancer centers. The chance of finding an invasive breast cancer at the time of breast reduction was 0.06 percent, which is lower than what has been reported previously. Sixty-seven percent of these women were treated with total mastectomy. In the remaining 33 percent, who were treated with partial mastectomy, the entire tumor was removed at the time of breast reduction. Fifty percent of the women were treated with radiation, and 25 percent were treated with chemotherapy or hormonal therapy. Compared with women in the general population of Ontario who have breast cancer, women whose breast cancer is discovered during breast reduction surgery are more likely to be treated with complete mastectomy and less likely to be treated with radiotherapy or chemotherapy. Seventy-one percent of the breast reduction group were axillary node-negative at diagnosis, compared with 58 percent in the general population of women with breast cancer. Survival from breast cancer in women diagnosed at the time of breast reduction (88 percent, 5-year survival) was better than survival from breast cancer in the general population (77 percent). These findings suggest that cancers found in women at the time of breast reduction are less advanced, possibly because they are diagnosed at an earlier stage.
- Published
- 1999
24. A follow-up study of 105 women with breast cancer following reduction mammaplasty
- Author
-
Christine L. Tang, Mitchell H. Brown, Ronald Levine, Margaret Sloan, Nelson Chong, and Eric Holowaty
- Subjects
Adult ,Survival Rate ,Postoperative Complications ,Time Factors ,Mammaplasty ,Humans ,Surgery ,Breast Neoplasms ,Female ,Middle Aged ,Aged ,Follow-Up Studies - Abstract
Reduction mammaplasty is one of the most common procedures performed by plastic surgeons in Canada. In a recent study of 27,500 women in the province of Ontario who underwent breast reduction surgery, 105 women were identified who developed breast cancer after reduction mammaplasty. The purpose of this study was to compare women who had breast cancer and had a previous breast reduction with women who had breast cancer but did not have a breast reduction. Specifically, we wanted to document patient demographics, cancer type, surgical and nonsurgical treatment, and eventual outcome. A comparison group of non-breast reduction women was taken from the cohort of breast cancer patients in the province of Ontario, and the two groups were matched for age, year of diagnosis, and place of diagnosis. It was found that (1) the average age at diagnosis of breast cancer is significantly younger for women who have had previous breast reduction surgery than for those who have not; (2) the median interval between breast reduction and cancer is 5 years; (3) the type, location, and side of breast cancers are similar in the two groups of women; (4) breast reduction does not significantly increase or decrease survival rate from breast cancer; and (5) women who have had breast reduction receive the same treatment for their breast cancer as women who have not had reduction mammaplasty.
- Published
- 1999
25. Prostate-specific antigen utilization in Ontario: extent of testing in patients with and without cancer
- Author
-
Eric J. Holowaty, Nelson Chong, Peter S. Bunting, and Vivek Goel
- Subjects
Male ,medicine.medical_specialty ,Databases, Factual ,Clinical Biochemistry ,Urology ,Rectum ,Prostate cancer ,Prostate ,medicine ,Humans ,Mass Screening ,In patient ,Tissue Distribution ,Mass screening ,Aged ,Gynecology ,Ontario ,business.industry ,Age Factors ,Cancer ,Prostatic Neoplasms ,General Medicine ,Middle Aged ,Prostate-Specific Antigen ,medicine.disease ,Cancer registry ,Prostate-specific antigen ,medicine.anatomical_structure ,business - Abstract
To ascertain the extent of prostate-specific antigen (PSA) testing in patients with prostate cancer (PC), with other cancers (OC), and with no cancer (NC) in two clinical laboratory databases.PSA test records were obtained from a tertiary care hospital, Sunnybrook Health Science Centre (SHSC) and from a private laboratory, Gamma-Dynacare Medical Laboratories (GDL), during the period 1988 to 1995. These records were linked with the Ontario Cancer Registry (OCR) to establish a diagnosis of PC, OC, or NC. Trends in PSA testing according to diagnostic category, testing laboratory, patient age (by decade), and PSA value (in microgram/L) were determined.Major cancer sites identified in the patients tested for PSA were prostate (60%), bladder and colon (7% each), lung (5%), kidney (3%), and rectum (3%). There were 11,867 patients (8.5%) with PC, 8,002 (5.9%) with OC, and 118,954 (86%) with NC. The total number of PSA tests performed on these patients was 230,756, of which 21% were on PC, 5% on OC, and 74% on NC; of these tests, 64% were performed through GDL and 36% through SHSC. The mean (median) number of tests per patient was: PC, 4.0 (2); OC, 1.4 (1); and NC, 1.5 (1). For PC 89% and for OC 72% of all tests occurred after diagnosis. Between 1990 and 1995 the number of PSA tests increased two-fold in PC and OC, and 20-fold in NC. We estimate that about one-half of the PSA tests in the NC group were for screening purposes. The proportion of PSA tests occurring in PC, OC, and NC for patients 50 to 70 years of age was 41%, 50%, and 63%, respectively; for patients over 70 years of age, this proportion was 58%, 46%, and 22% respectively; and for patients under 50 it was 1%, 4%, and 15%, respectively. Between 1990 and 1995, the largest increase in testing frequency was in the NC group, particularly in patients 50 to 70 years of age, which was accompanied by a decrease in patients over 70. Less than 10% of testing occurred in patients under 50 in all diagnostic groups. We estimate that about 26% of PSA screening tests in NC occurred outside the guidelines for patient age. Between 1988 and 1995, the proportion of PSA results below our detection limit (0.2 micrograms/L) showed a steady rise in the PC group, as did the proportion between 0.2 and 3.9 micrograms/L; these were accompanied by a fall in the proportion20.0 micrograms/L. However, the proportion of PSA results within these ranges did not change much during the same time period for the OC and NC groups. At cutoffs of PSA = 4.0 micrograms/L (or PSA = 10.0 micrograms/L), estimates of clinical specificity were 84.0% (or 96.3%), and of clinical sensitivity were 83.4% (or 47.1%).Most (86%) PSA testing occurred in men with NC, consistent with diagnosis or screening. There were more PSA tests per patient in PC than in OC, and most testing occurred after diagnosis. PSA testing in the NC group continues to increase rapidly. The proportion of PSA tests in patients over age 70 decreased in the order of PCNCOC. Between 1990 and 1995, there was an increase in the proportion of patients tested who were between 50 and 70 in the NC group, which may suggest more screening in this group. Over this same time period, there was an increase in the proportion of undetectable PSA values, possibly suggesting increased use of radical therapy; there was also a decrease in the proportion of PSA20 micrograms/L, possibly suggesting a decrease in the prevalence of advanced stage PC.
- Published
- 1998
26. Clinical and prognostic factors associated with diagnostic wait times by breast cancer detection method
- Author
-
Maegan V. Prummel, Claire M. B. Holloway, Amalia Plotogea, Frances P. O'Malley, Nelson Chong, Lucia Mirea, Rene Shumak, and Anna M. Chiarelli
- Subjects
medicine.medical_specialty ,Pathology ,Multidisciplinary ,Open biopsy ,medicine.diagnostic_test ,business.industry ,Research ,Diagnostic wait time ,medicine.disease ,Logistic regression ,Symptomatic cancers ,Screen-detected cancers ,Interval cancers ,Breast cancer ,Fine-needle aspiration ,Internal medicine ,Biopsy ,Cohort ,medicine ,Mammography ,Stage (cooking) ,business - Abstract
Introduction Although prognostic differences between screen-detected, interval and symptomatic breast cancers are known, factors associated with wait times to diagnosis among these three groups have not been studied. Methods Of the 16,373 invasive breast cancers diagnosed between January 1, 1995 and December 31, 2003 in a cohort of Ontario women aged 50 to 69, a random sample (N = 2,615) were selected for chart abstraction. Eligible women were classified according to detection method; screen-detected (n = 1181), interval (n = 319) or symptomatic (n = 406). Diagnostic wait time was calculated from the initial imaging or biopsy to breast cancer diagnosis. Logistic regression analysis examined associations between diagnostic wait times dichotomized as greater or less than the median and demographic, clinical and prognostic factors separately for each detection cohort. Results Women who underwent an open biopsy had significantly longer than median wait times to diagnosis, compared to women who underwent a fine needle aspiration or core biopsy; (screen-detected OR = 2.76, 95% CI = 2.14-3.56; interval OR = 2.56, 95% CI = 1.50-4.35; symptomatic OR = 5.56, 95% CI = 3.33-9.30). Additionally, screen-detected breast cancers diagnosed with stage II and symptomatic cancers diagnosed at stage III or IV had significantly shorter diagnostic wait times compared to those diagnosed at stage 1 (OR = 0.66 95% CI = 0.50-0.87 and OR = 0.46, 95% CI = 0.25-0.85 respectively). Conclusions Our study is consistent with expedited diagnostic work-up for breast cancers with more advanced prognostic features. Furthermore, women who had an open surgical biopsy had a greater than the median diagnostic wait time, irrespective of detection method.
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.