26 results on '"Naylor RW"'
Search Results
2. The glomerular circadian clock temporally regulates basement membrane dynamics and the podocyte glucocorticoid response.
- Author
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Preston R, Chrisp R, Dudek M, Morais MRPT, Tian P, Williams E, Naylor RW, Davenport B, Pathiranage DRJ, Benson E, Spiller DG, Bagnall J, Zeef L, Lawless C, Baker SM, Meng QJ, and Lennon R
- Subjects
- Animals, Mice, Membrane Proteins genetics, Membrane Proteins metabolism, Transcriptome, Intracellular Signaling Peptides and Proteins genetics, Intracellular Signaling Peptides and Proteins metabolism, Gene Expression Profiling, Male, Nephrotic Syndrome genetics, Nephrotic Syndrome metabolism, Nephrotic Syndrome physiopathology, Nephrotic Syndrome drug therapy, Nephrotic Syndrome pathology, CLOCK Proteins genetics, CLOCK Proteins metabolism, Signal Transduction, Kidney Glomerulus pathology, Kidney Glomerulus drug effects, Kidney Glomerulus metabolism, Receptors, Glucocorticoid metabolism, Receptors, Glucocorticoid genetics, Mice, Inbred C57BL, Gene Expression Regulation, Podocytes metabolism, Glucocorticoids, Circadian Clocks genetics, Circadian Clocks physiology, Circadian Rhythm genetics, Circadian Rhythm physiology, Glomerular Basement Membrane metabolism, Glomerular Basement Membrane ultrastructure, Glomerular Basement Membrane pathology
- Abstract
Kidney physiology shows diurnal variation, and a disrupted circadian rhythm is associated with kidney disease. However, it remains largely unknown whether glomeruli, the filtering units in the kidney, are under circadian control. Here, we investigated core circadian clock components in glomeruli, together with their rhythmic targets and modes of regulation. With clock gene reporter mice, cell-autonomous glomerular clocks which likely govern rhythmic fluctuations in glomerular physiology were identified. Using circadian time-series transcriptomic profiling, the first circadian glomerular transcriptome with 375 rhythmic transcripts, enriched for extracellular matrix and glucocorticoid receptor signaling ontologies, were identified. Subsets of rhythmic matrix-related genes required for basement membrane assembly and turnover, and circadian variation in matrix ultrastructure, coinciding with peak abundance of rhythmic basement membrane proteins, were uncovered. This provided multiomic evidence for interactions between glomerular matrix and intracellular time-keeping mechanisms. Furthermore, glucocorticoids, which are frequently used to treat glomerular disease, reset the podocyte clock and induce rhythmic expression of potential glomerular disease genes associated with nephrotic syndrome that included Nphs1 (nephrin) and Nphs2 (podocin). Disruption of the clock with pharmacological inhibition altered the expression of these disease genes, indicating an interplay between clock gene expression and key genes required for podocyte health. Thus, our results provide a strong basis for future investigations of the functional implications and therapeutic potential of chronotherapy in glomerular health and disease., (Copyright © 2024 International Society of Nephrology. Published by Elsevier Inc. All rights reserved.)
- Published
- 2025
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3. Integrin alpha1 beta1 promotes interstitial fibrosis in a mouse model of polycystic kidney disease.
- Author
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Grenier C, Lin IH, Peters D, Pozzi A, Lennon R, and Naylor RW
- Abstract
Fibrosis is the cause of end-stage kidney failure in patients with Autosomal Dominant Polycystic Kidney Disease (ADPKD). The molecular and cellular mechanisms involved in fibrosis are complex and anti-fibrotic therapies have so far failed to make an impact on patient welfare. Using unbiased proteomics analysis on the Pkd1
nl/nl mouse, we found that expression of the integrin α1 subunit is increased in this model of ADPKD. In human ADPKD tissue and two single cell RNA kidney disease datasets, ITGA1 was also upregulated. To investigate the functional role of this integrin subunit in ADPKD, we generated a Pkd1nl/nl Itga1-/- mouse. We observed a significant reduction in kidney volume and kidney dysfunction in mice lacking the integrin α1 subunit. Kidneys from Pkd1nl/nl Itga1-/- mice had smaller cysts and reduced interstitial expansion and tubular atrophy. Picrosirius red staining identified a restriction in collagen staining in the interstitium and the myofibroblast marker α smooth muscle actin was also downregulated. Myofibroblast cell proliferation was reduced in Pkd1nl/nl Itga1-/- mice and primary fibroblast cultures demonstrated an abrogated fibrogenic phenotype in integrin α1-depleted fibroblasts. These results highlight a previously unrecognised role for the integrin α1 subunit in kidney fibrosis.- Published
- 2024
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4. FLT4 causes developmental disorders of the cardiovascular and lymphovascular systems via pleiotropic molecular mechanisms.
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Monaghan RM, Naylor RW, Flatman D, Kasher PR, Williams SG, and Keavney BD
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- Animals, Humans, Cells, Cultured, Endoplasmic Reticulum metabolism, Endoplasmic Reticulum pathology, Endoplasmic Reticulum genetics, Endothelial Cells metabolism, Endothelial Cells pathology, Gene Expression Regulation, Developmental, Genetic Predisposition to Disease, Human Umbilical Vein Endothelial Cells metabolism, Human Umbilical Vein Endothelial Cells pathology, Lymphedema genetics, Lymphedema metabolism, Lymphedema pathology, Lymphedema physiopathology, Mutation, Phenotype, Signal Transduction, Tetralogy of Fallot genetics, Tetralogy of Fallot pathology, Tetralogy of Fallot metabolism, Vascular Endothelial Growth Factor Receptor-3 metabolism, Vascular Endothelial Growth Factor Receptor-3 genetics, Zebrafish genetics, Zebrafish Proteins genetics, Zebrafish Proteins metabolism
- Abstract
Aims: Rare, deleterious genetic variants in FLT4 are associated with Tetralogy of Fallot (TOF), the most common cyanotic congenital heart disease. The distinct genetic variants in FLT4 are also an established cause of Milroy disease, the most prevalent form of primary hereditary lymphoedema. The phenotypic features of these two conditions are non-overlapping, implying pleiotropic cellular mechanisms during development., Methods and Results: In this study, we show that FLT4 variants identified in patients with TOF, when expressed in primary human endothelial cells, cause aggregation of FLT4 protein in the perinuclear endoplasmic reticulum, activating proteostatic and metabolic signalling, whereas lymphoedema-associated FLT4 variants and wild-type (WT) FLT4 do not. FLT4 TOF variants display characteristic gene expression profiles in key developmental signalling pathways, revealing a role for FLT4 in cardiogenesis distinct from its role in lymphatic development. Inhibition of proteostatic signalling abrogates these effects, identifying potential avenues for therapeutic intervention. Depletion of flt4 in zebrafish caused cardiac phenotypes of reduced heart size and altered heart looping. These phenotypes were rescued with coinjection of WT human FLT4 mRNA, but incompletely or not at all by mRNA harbouring FLT4 TOF variants., Conclusion: Taken together, we identify a pathogenic mechanism for FLT4 variants predisposing to TOF that is distinct from the known dominant negative mechanism of Milroy-causative variants. FLT4 variants give rise to conditions of the two circulatory subdivisions of the vascular system via distinct developmental pleiotropic molecular mechanisms., Competing Interests: Conflict of interest: none declared., (© The Author(s) 2024. Published by Oxford University Press on behalf of the European Society of Cardiology.)
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- 2024
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5. Corrigendum to "A novel nanoluciferase transgenic reporter measures proteinuria in zebrafish." Kidney Int. 2022;102:815-827.
- Author
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Naylor RW, Lemarie E, Jackson-Crawford A, Davenport JB, Mironov A, Lowe M, and Lennon R
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- 2024
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6. Basement membrane defects in CD151-associated glomerular disease.
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Naylor RW, Watson E, Williamson S, Preston R, Davenport JB, Thornton N, Lowe M, Williams M, and Lennon R
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- Animals, Child, Humans, Glomerular Basement Membrane pathology, Integrin alpha3beta1, Laminin genetics, Proteinuria etiology, RNA, Messenger, Tetraspanin 24 genetics, Zebrafish, Kidney Diseases genetics, Kidney Diseases complications, Podocytes pathology
- Abstract
Background: CD151 is a cell-surface molecule of the tetraspanin family. Its lateral interaction with laminin-binding integrin ɑ3β1 is important for podocyte adhesion to the glomerular basement membrane (GBM). Deletion of Cd151 in mice induces glomerular dysfunction, with proteinuria and associated focal glomerulosclerosis, disorganisation of GBM and tubular cystic dilation. Despite this, CD151 is not routinely screened for in patients with nephrotic-range proteinuria. We aimed to better understand the relevance of CD151 in human kidney disease., Methods: Next-generation sequencing (NGS) was used to detect the variant in CD151. Electron and light microscopy were used to visualise the filtration barrier in the patient kidney biopsy, and immunoreactivity of patient red blood cells to anti-CD151/MER2 antibodies was performed. Further validation of the CD151 variant as disease-causing was performed in zebrafish using CRISPR-Cas9., Results: We report a young child with nail dystrophy and persistent urinary tract infections who was incidentally found to have nephrotic-range proteinuria. Through targeted NGS, a novel, homozygous truncating variant was identified in CD151, a gene rarely reported in patients with nephrotic syndrome. Electron microscopy imaging of patient kidney tissue showed thickening of GBM and podocyte effacement. Immunofluorescence of patient kidney tissue demonstrated that CD151 was significantly reduced, and we did not detect immunoreactivity to CD151/MER2 on patient red blood cells. CRISPR-Cas9 depletion of cd151 in zebrafish caused proteinuria, which was rescued by injection of wild-type CD151 mRNA, but not CD151 mRNA containing the variant sequence., Conclusions: Our results indicate that a novel variant in CD151 is associated with nephrotic-range proteinuria and microscopic haematuria and provides further evidence for a role of CD151 in glomerular disease. Our work highlights a functional testing pipeline for future analysis of patient genetic variants. A higher resolution version of the Graphical abstract is available as Supplementary information., (© 2022. The Author(s).)
- Published
- 2022
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7. Integrating basic science with translational research: the 13th International Podocyte Conference 2021.
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Lausecker F, Koehler S, Fresquet M, Naylor RW, Tian P, Wanner N, Braun F, Butt L, Huber TB, and Lennon R
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- Humans, Translational Research, Biomedical, COVID-19 epidemiology, Podocytes
- Abstract
The 13th International Podocyte Conference was held in Manchester, UK, and online from July 28 to 30, 2021. Originally planned for 2020, this biannual meeting was postponed by a year because of the coronavirus disease 2019 (COVID-19) pandemic and proceeded as an innovative hybrid meeting. In addition to in-person attendance, online registration was offered, and this attracted 490 conference registrations in total. As a Podocyte Conference first, a day for early-career researchers was introduced. This premeeting included talks from graduate students and postdoctoral researchers. It gave early career researchers the opportunity to ask a panel, comprising academic leaders and journal editors, about career pathways and the future for podocyte research. The main meeting over 3 days included a keynote talk and 4 focused sessions each day incorporating invited talks, followed by selected abstract presentations, and an open panel discussion. The conference concluded with a Patient Day, which brought together patients, clinicians, researchers, and industry representatives. The Patient Day was an interactive and diverse day. As well as updates on improving diagnosis and potential new therapies, the Patient Day included a PodoArt competition, exercise and cooking classes with practical nutrition advice, and inspirational stories from patients and family members. This review summarizes the exciting science presented during the 13th International Podocyte Conference and demonstrates the resilience of researchers during a global pandemic., (Copyright © 2022 International Society of Nephrology. Published by Elsevier Inc. All rights reserved.)
- Published
- 2022
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8. A novel nanoluciferase transgenic reporter measures proteinuria in zebrafish.
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Naylor RW, Lemarie E, Jackson-Crawford A, Davenport JB, Mironov A, Lowe M, and Lennon R
- Subjects
- Angiotensin II metabolism, Animals, Animals, Genetically Modified, Captopril metabolism, Cisplatin, Gentamicins metabolism, Humans, Kidney Glomerulus metabolism, Nephrotic Syndrome, Proteinuria drug therapy, Proteinuria genetics, Proteinuria metabolism, Serum Albumin, Bovine metabolism, Nephritis, Hereditary genetics, Zebrafish genetics
- Abstract
The zebrafish is an important animal system for modeling human diseases. This includes kidney dysfunction as the embryonic kidney (pronephros) shares considerable molecular and morphological homology with the human nephron. A key clinical indicator of kidney disease is proteinuria, but a high-throughput readout of proteinuria in the zebrafish is currently lacking. To remedy this, we used the Tol2 transposon system to generate a transgenic zebrafish line that uses the fabp10a liver-specific promoter to over-express a nanoluciferase molecule fused with the D3 domain of Receptor-Associated Protein (a type of molecular chaperone) which we term NL-D3. Using a luminometer, we quantified proteinuria in NL-D3 zebrafish larvae by measuring the intensity of luminescence in the embryo medium. In the healthy state, NL-D3 is not excreted, but when embryos were treated with chemicals that affected either proximal tubular reabsorption (cisplatin, gentamicin) or glomerular filtration (angiotensin II, Hanks Balanced Salt Solution, Bovine Serum Albumin), NL-D3 is detected in fish medium. Similarly, depletion of several gene products associated with kidney disease (nphs1, nphs2, lrp2a, ocrl, col4a3, and col4a4) also induced NL-D3 proteinuria. Treating col4a4 depleted zebrafish larvae (a model of Alport syndrome) with captopril reduced proteinuria in this system. Thus, our findings validate the use of the NL-D3 transgenic zebrafish as a robust and quantifiable proteinuria reporter. Hence, given the feasibility of high-throughput assays in zebrafish, this novel reporter will permit screening for drugs that ameliorate proteinuria, thereby prioritizing candidates for further translational studies., (Crown Copyright © 2022. Published by Elsevier Inc. All rights reserved.)
- Published
- 2022
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9. A basement membrane discovery pipeline uncovers network complexity, regulators, and human disease associations.
- Author
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Jayadev R, Morais MRPT, Ellingford JM, Srinivasan S, Naylor RW, Lawless C, Li AS, Ingham JF, Hastie E, Chi Q, Fresquet M, Koudis NM, Thomas HB, O'Keefe RT, Williams E, Adamson A, Stuart HM, Banka S, Smedley D, Sherwood DR, and Lennon R
- Subjects
- Animals, Basement Membrane metabolism, Extracellular Matrix genetics, Extracellular Matrix metabolism, Extracellular Matrix Proteins metabolism, Humans, Caenorhabditis elegans genetics, Caenorhabditis elegans metabolism, Zebrafish genetics
- Abstract
Basement membranes (BMs) are ubiquitous extracellular matrices whose composition remains elusive, limiting our understanding of BM regulation and function. By developing a bioinformatic and in vivo discovery pipeline, we define a network of 222 human proteins and their animal orthologs localized to BMs. Network analysis and screening in C. elegans and zebrafish uncovered BM regulators, including ADAMTS, ROBO, and TGFβ. More than 100 BM network genes associate with human phenotypes, and by screening 63,039 genomes from families with rare disorders, we found loss-of-function variants in LAMA5 , MPZL2 , and MATN2 and show that they regulate BM composition and function. This cross-disciplinary study establishes the immense complexity of BMs and their impact on in human health.
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- 2022
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10. Complexities of the glomerular basement membrane.
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Naylor RW, Morais MRPT, and Lennon R
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- Humans, Anti-Glomerular Basement Membrane Disease etiology, Diabetic Nephropathies etiology, Glomerular Basement Membrane pathology, Glomerular Basement Membrane physiopathology, Myasthenic Syndromes, Congenital etiology, Nephritis, Hereditary etiology, Nephrotic Syndrome etiology, Pupil Disorders etiology
- Abstract
The glomerular basement membrane (GBM) is a key component of the glomerular capillary wall and is essential for kidney filtration. The major components of the GBM include laminins, type IV collagen, nidogens and heparan sulfate proteoglycans. In addition, the GBM harbours a number of other structural and regulatory components and provides a reservoir for growth factors. New technologies have improved our ability to study the composition and assembly of basement membranes. We now know that the GBM is a complex macromolecular structure that undergoes key transitions during glomerular development. Defects in GBM components are associated with a range of hereditary human diseases such as Alport syndrome, which is caused by defects in the genes COL4A3, COL4A4 and COL4A5, and Pierson syndrome, which is caused by variants in LAMB2. In addition, the GBM is affected by acquired autoimmune disorders and metabolic diseases such as diabetes mellitus. Current treatments for diseases associated with GBM involvement aim to reduce intraglomerular pressure and to treat the underlying cause where possible. As our understanding about the maintenance and turnover of the GBM improves, therapies to replace GBM components or to stimulate GBM repair could translate into new therapies for patients with GBM-associated disease.
- Published
- 2021
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11. A role for OCRL in glomerular function and disease.
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Preston R, Naylor RW, Stewart G, Bierzynska A, Saleem MA, Lowe M, and Lennon R
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- Animals, Child, Chloride Channels, Glomerulosclerosis, Focal Segmental complications, Humans, Male, Mutation, Oculocerebrorenal Syndrome complications, Phosphoric Monoester Hydrolases, Podocytes metabolism, Proteinuria etiology, Exome Sequencing, Zebrafish, Glomerulosclerosis, Focal Segmental genetics, Kidney Glomerulus metabolism, Oculocerebrorenal Syndrome genetics
- Abstract
Background: Lowe syndrome and Dent-2 disease are caused by mutations in the OCRL gene, which encodes for an inositol 5-phosphatase. The renal phenotype associated with OCRL mutations typically comprises a selective proximal tubulopathy, which can manifest as Fanconi syndrome in the most extreme cases., Methods: Here, we report a 12-year-old male with nephrotic-range proteinuria and focal segmental glomerulosclerosis on renal biopsy. As a glomerular pathology was suspected, extensive investigation of tubular function was not performed., Results: Surprisingly, whole exome sequencing identified a genetic variant in OCRL (c1467-2A>G) that introduced a novel splice mutation leading to skipping of exon 15. In situ hybridisation of adult human kidney tissue and zebrafish larvae showed OCRL expression in the glomerulus, supporting a role for OCRL in glomerular function. In cultured podocytes, we found that OCRL associated with the linker protein IPIP27A and CD2AP, a protein that is important for maintenance of the podocyte slit diaphragm., Conclusion: Taken together, this work suggests a previously under-appreciated role for OCRL in glomerular function and highlights the importance of investigating tubular function in patients with persistent proteinuria.
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- 2020
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12. Transcriptional profiling of the zebrafish proximal tubule.
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Sander V, Salleh L, Naylor RW, Schierding W, Sontam D, O'Sullivan JM, and Davidson AJ
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- Animals, Animals, Genetically Modified, Carrier Proteins genetics, Carrier Proteins metabolism, Gene Expression Regulation, Developmental, Larva, Mice, RNA biosynthesis, RNA genetics, Species Specificity, Gene Expression Profiling, Hepatocyte Nuclear Factor 1-beta genetics, Hepatocyte Nuclear Factor 1-beta physiology, Kidney Tubules, Proximal metabolism, Zebrafish genetics, Zebrafish Proteins genetics, Zebrafish Proteins physiology
- Abstract
The hepatocyte nuclear factor-1β (Hnf1b) transcription factor is a key regulator of kidney tubule formation and is associated with a syndrome of renal cysts and early onset diabetes. To further our understanding of Hnf1b in the developing zebrafish kidney, we performed RNA sequencing analysis of proximal tubules from hnf1b -deficient larvae. This analysis revealed an enrichment of gene transcripts encoding transporters of the solute carrier (SLC) superfamily, including multiple members of slc2 and slc5 glucose transporters. An investigation of expression of slc2a1a , slc2a2, and slc5a2 as well as a poorly studied glucose/mannose transporter encoded by slc5a9 revealed that these genes undergo dynamic spatiotemporal changes during tubule formation and maturation. A comparative analysis of zebrafish SLC genes with those expressed in mouse proximal tubules showed a substantial overlap at the level of gene families, indicating a high degree of functional conservation between zebrafish and mammalian proximal tubules. Taken together, our findings are consistent with a role for Hnf1b as a critical determinant of proximal tubule transport function by acting upstream of a large number of SLC genes and validate the zebrafish as a physiologically relevant model of the mammalian proximal tubule.
- Published
- 2019
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13. Mind the gap: renal tubule responses to injury and the role of Cxcl12 and Myc.
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Sander V, Naylor RW, and Davidson AJ
- Abstract
Competing Interests: Conflicts of Interest: The authors have no conflicts of interest to declare.
- Published
- 2019
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14. A novel mechanism of gland formation in zebrafish involving transdifferentiation of renal epithelial cells and live cell extrusion.
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Naylor RW, Chang HG, Qubisi S, and Davidson AJ
- Subjects
- Animals, Hepatocyte Nuclear Factor 1-beta metabolism, Receptors, Notch metabolism, Signal Transduction, Zebrafish Proteins metabolism, Cell Transdifferentiation, Endocrine Glands embryology, Epithelial Cells physiology, Zebrafish embryology
- Abstract
Transdifferentiation is the poorly understood phenomenon whereby a terminally differentiated cell acquires a completely new identity. Here, we describe a rare example of a naturally occurring transdifferentiation event in zebrafish in which kidney distal tubule epithelial cells are converted into an endocrine gland known as the Corpuscles of Stannius (CS). We find that this process requires Notch signalling and is associated with the cytoplasmic sequestration of the Hnf1b transcription factor, a master-regulator of renal tubule fate. A deficiency in the Irx3b transcription factor results in ectopic transdifferentiation of distal tubule cells to a CS identity but in a Notch-dependent fashion. Using live-cell imaging we show that CS cells undergo apical constriction en masse and are then extruded from the tubule to form a distinct organ. This system provides a valuable new model to understand the molecular and morphological basis of transdifferentiation and will advance efforts to exploit this rare phenomenon therapeutically., Competing Interests: RN, HC, SQ, AD No competing interests declared, (© 2018, Naylor et al.)
- Published
- 2018
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15. Wnt8a expands the pool of embryonic kidney progenitors in zebrafish.
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Naylor RW, Han HI, Hukriede NA, and Davidson AJ
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- Animals, Apoptosis drug effects, Blood Cells cytology, Blood Cells drug effects, Body Patterning drug effects, Cell Count, Cell Proliferation drug effects, Embryo, Nonmammalian drug effects, Gene Knockdown Techniques, Indoles pharmacology, Kidney Tubules drug effects, Kidney Tubules pathology, Mesoderm drug effects, Mesoderm embryology, Mesoderm metabolism, Morpholinos pharmacology, Oximes pharmacology, Pronephros cytology, Pronephros embryology, Stem Cells drug effects, Stem Cells metabolism, Cytoskeletal Proteins metabolism, Embryo, Nonmammalian cytology, Kidney cytology, Kidney embryology, Stem Cells cytology, Wnt Proteins metabolism, Zebrafish embryology, Zebrafish metabolism, Zebrafish Proteins metabolism
- Abstract
During zebrafish embryogenesis the pronephric kidney arises from a small population of posterior mesoderm cells that then undergo expansion during early stages of renal organogenesis. While wnt8 is required for posterior mesoderm formation during gastrulation, it is also transiently expressed in the post-gastrula embryo in the intermediate mesoderm, the precursor to the pronephros and some blood/vascular lineages. Here, we show that knockdown of wnt8a, using a low dose of morpholino that does not disrupt early mesoderm patterning, reduces the number of kidney and blood cells. For the kidney, wnt8a deficiency decreases renal progenitor growth during early somitogenesis, as detected by EdU incorporation, but has no effect on apoptosis. The depletion of the renal progenitor pool in wnt8a knockdown embryos leads to cellular deficits in the pronephros at 24 hpf that are characterised by a shortened distal-most segment and stretched proximal tubule cells. A pulse of the canonical Wnt pathway agonist BIO during early somitogenesis is sufficient to rescue the size of the renal progenitor pool while longer treatment expands the number of kidney cells. Taken together, these observations indicate that Wnt8, in addition to its well-established role in posterior mesoderm patterning, also plays a later role as a factor that expands the renal progenitor pool prior to kidney morphogenesis., (Copyright © 2017. Published by Elsevier Inc.)
- Published
- 2017
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16. Pronephric tubule formation in zebrafish: morphogenesis and migration.
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Naylor RW and Davidson AJ
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- Animals, Kidney Tubules embryology, Morphogenesis physiology, Organogenesis physiology, Zebrafish embryology
- Abstract
The nephron is the functional subunit of the vertebrate kidney and plays important osmoregulatory and excretory roles during embryonic development and in adulthood. Despite its central role in kidney function, surprisingly little is known about the molecular and cellular processes that control nephrogenesis. The zebrafish pronephric kidney, comprising two nephrons, provides a visually accessible and genetically tractable model system for a better understanding of nephron formation. Using this system, various developmental processes, including the commitment of mesoderm to a kidney fate, renal tubule proliferation, and migration, can be studied during nephrogenesis. Here, we discuss some of these processes in zebrafish with a focus on the pathways that influence renal tubule cell morphogenesis.
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- 2017
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17. Zebrafish Pronephros Development.
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Naylor RW, Qubisi SS, and Davidson AJ
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- Animals, Models, Animal, Organogenesis, Zebrafish Proteins, Pronephros embryology, Zebrafish embryology
- Abstract
The pronephros is the first kidney type to form in vertebrate embryos. The first step of pronephrogenesis in the zebrafish is the formation of the intermediate mesoderm during gastrulation, which occurs in response to secreted morphogens such as BMPs and Nodals. Patterning of the intermediate mesoderm into proximal and distal cell fates is induced by retinoic acid signaling with downstream transcription factors including wt1a, pax2a, pax8, hnf1b, sim1a, mecom, and irx3b. In the anterior intermediate mesoderm, progenitors of the glomerular blood filter migrate and fuse at the midline and recruit a blood supply. More posteriorly localized tubule progenitors undergo epithelialization and fuse with the cloaca. The Notch signaling pathway regulates the formation of multi-ciliated cells in the tubules and these cells help propel the filtrate to the cloaca. The lumenal sheer stress caused by flow down the tubule activates anterior collective migration of the proximal tubules and induces stretching and proliferation of the more distal segments. Ultimately these processes create a simple two-nephron kidney that is capable of reabsorbing and secreting solutes and expelling excess water-processes that are critical to the homeostasis of the body fluids. The zebrafish pronephric kidney provides a simple, yet powerful, model system to better understand the conserved molecular and cellular progresses that drive nephron formation, structure, and function.
- Published
- 2017
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18. Derivation of Corneal Keratocyte-Like Cells from Human Induced Pluripotent Stem Cells.
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Naylor RW, McGhee CN, Cowan CA, Davidson AJ, Holm TM, and Sherwin T
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- Cell Culture Techniques, Cell Line, Collagen metabolism, Corneal Keratocytes metabolism, Humans, Iris cytology, Neural Crest cytology, Phenotype, Cell Differentiation, Corneal Keratocytes cytology, Induced Pluripotent Stem Cells cytology
- Abstract
Corneal diseases such as keratoconus represent a relatively common disorder in the human population. However, treatment is restricted to corneal transplantation, which only occurs in the most advanced cases. Cell based therapies may offer an alternative approach given that the eye is amenable to such treatments and corneal diseases like keratoconus have been associated specifically with the death of corneal keratocytes. The ability to generate corneal keratocytes in vitro may enable a cell-based therapy to treat patients with keratoconus. Human induced pluripotent stem cells (hiPSCs) offer an abundant supply of cells from which any cell in the body can be derived. In the present study, hiPSCs were successfully differentiated into neural crest cells (NCCs), the embryonic precursor to keratocytes, and then cultured on cadaveric corneal tissue to promote keratocyte differentiation. The hiPSC-derived NCCs were found to migrate into the corneal stroma where they acquired a keratocyte-like morphology and an expression profile similar to corneal keratocytes in vivo. These results indicate that hiPSCs can be used to generate corneal keratocytes in vitro and lay the foundation for using these cells in cornea cell-based therapies., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2016
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19. Caudal migration and proliferation of renal progenitors regulates early nephron segment size in zebrafish.
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Naylor RW, Dodd RC, and Davidson AJ
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- Animals, Kidney anatomy & histology, Morphogenesis, Nephrons anatomy & histology, Zebrafish anatomy & histology, Cell Movement, Cell Proliferation, Kidney embryology, Nephrons embryology, Stem Cells physiology, Zebrafish embryology
- Abstract
The nephron is the functional unit of the kidney and is divided into distinct proximal and distal segments. The factors determining nephron segment size are not fully understood. In zebrafish, the embryonic kidney has long been thought to differentiate in situ into two proximal tubule segments and two distal tubule segments (distal early; DE, and distal late; DL) with little involvement of cell movement. Here, we overturn this notion by performing lineage-labelling experiments that reveal extensive caudal movement of the proximal and DE segments and a concomitant compaction of the DL segment as it fuses with the cloaca. Laser-mediated severing of the tubule, such that the DE and DL are disconnected or that the DL and cloaca do not fuse, results in a reduction in tubule cell proliferation and significantly shortens the DE segment while the caudal movement of the DL is unaffected. These results suggest that the DL mechanically pulls the more proximal segments, thereby driving both their caudal extension and their proliferation. Together, these data provide new insights into early nephron morphogenesis and demonstrate the importance of cell movement and proliferation in determining initial nephron segment size.
- Published
- 2016
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20. BMP and retinoic acid regulate anterior-posterior patterning of the non-axial mesoderm across the dorsal-ventral axis.
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Naylor RW, Skvarca LB, Thisse C, Thisse B, Hukriede NA, and Davidson AJ
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- Animals, Body Patterning drug effects, Bone Morphogenetic Proteins genetics, Embryo, Nonmammalian, Tretinoin pharmacology, Body Patterning genetics, Bone Morphogenetic Protein 2 genetics, Kidney embryology, Mesoderm embryology, Retinoic Acid 4-Hydroxylase genetics, Tretinoin metabolism, Zebrafish embryology, Zebrafish Proteins genetics
- Abstract
Despite the fundamental importance of patterning along the dorsal-ventral (DV) and anterior-posterior (AP) axes during embryogenesis, uncertainty exists in the orientation of these axes for the mesoderm. Here we examine the origin and formation of the zebrafish kidney, a ventrolateral mesoderm derivative, and show that AP patterning of the non-axial mesoderm occurs across the classic gastrula stage DV axis while DV patterning aligns along the animal-vegetal pole. We find that BMP signalling acts early to establish broad anterior and posterior territories in the non-axial mesoderm while retinoic acid (RA) functions later, but also across the classic DV axis. Our data support a model in which RA on the dorsal side of the embryo induces anterior kidney fates while posterior kidney progenitors are protected ventrally by the RA-catabolizing enzyme Cyp26a1. This work clarifies our understanding of vertebrate axis orientation and establishes a new paradigm for how the kidney and other mesodermal derivatives arise during embryogenesis.
- Published
- 2016
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21. Hnf1beta and nephron segmentation.
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Naylor RW and Davidson AJ
- Subjects
- Animals, Hepatocyte Nuclear Factor 1-beta physiology, Humans, Organogenesis physiology, Zebrafish Proteins physiology, Hepatocyte Nuclear Factor 1-beta metabolism, Nephrons embryology, Nephrons metabolism, Zebrafish Proteins metabolism
- Abstract
The nephron is the functional unit that executes the homeostatic roles of the kidney in vertebrates. Critical to this function is the physical arrangement of the glomerular blood filter attached to a tubular epithelium that is subdivided into specialized proximal and distal segments. During embryogenesis, nephron progenitors undergo a mesenchymal-epithelial transition (MET) and adopt different segment-specific cell fates along the proximo-distal axis of the nephron. The molecular basis of how these segments arise remains largely unknown. Recent studies using the zebrafish have identified the Hnf1beta transcription factor (Hnf1b) as a major regulator of tubular segmentation. In Hnf1b-deficient zebrafish embryos, nephron progenitors fail to adopt the proximo-distal segmentation pattern of the nephron, yet still undergo MET. This observation suggests that the functional segmentation of renal tubular epithelial cells is independent of pathways that induce their epithelialization. Here we review this new role of Hnf1b for nephron segmentation during zebrafish and mouse kidney development.
- Published
- 2014
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22. HNF1β is essential for nephron segmentation during nephrogenesis.
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Naylor RW, Przepiorski A, Ren Q, Yu J, and Davidson AJ
- Subjects
- Animals, Cadherins metabolism, Down-Regulation, Embryo, Nonmammalian metabolism, Homeodomain Proteins metabolism, PAX2 Transcription Factor metabolism, PAX8 Transcription Factor, Paired Box Transcription Factors metabolism, Podocytes physiology, Receptors, Notch metabolism, Signal Transduction, Transcription Factors metabolism, Tretinoin metabolism, Zebrafish, Hepatocyte Nuclear Factor 1-beta metabolism, Nephrons embryology, Zebrafish Proteins metabolism
- Abstract
Nephrons comprise a blood filter and an epithelial tubule that is subdivided into proximal and distal segments, but what directs this patterning during kidney organogenesis is not well understood. Using zebrafish, we found that the HNF1β paralogues hnf1ba and hnf1bb, which encode homeodomain transcription factors, are essential for normal segmentation of nephrons. Embryos deficient in hnf1ba and hnf1bb did not express proximal and distal segment markers, yet still developed an epithelial tubule. Initiating hnf1ba/b expression required Pax2a and Pax8, but hnf1ba/b-deficient embryos did not exhibit the expected downregulation of pax2a and pax8 at later stages of development, suggesting complex regulatory loops involving these molecules. Embryos deficient in hnf1ba/b also did not express the irx3b transcription factor, which is responsible for differentiation of the first distal tubule segment. Reciprocally, embryos deficient in irx3b exhibited downregulation of hnf1ba/b transcripts in the distal early segment, suggesting a segment-specific regulatory circuit. Deficiency of hnf1ba/b also led to ectopic expansion of podocytes into the proximal tubule domain. Epistasis experiments showed that the formation of podocytes required wt1a, which encodes the Wilms' tumor suppressor-1 transcription factor, and rbpj, which encodes a mediator of canonical Notch signaling, downstream or parallel to hnf1ba/b. Taken together, these results suggest that Hnf1β factors are essential for normal segmentation of nephrons during kidney organogenesis.
- Published
- 2013
- Full Text
- View/download PDF
23. Identification of adult nephron progenitors capable of kidney regeneration in zebrafish.
- Author
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Diep CQ, Ma D, Deo RC, Holm TM, Naylor RW, Arora N, Wingert RA, Bollig F, Djordjevic G, Lichman B, Zhu H, Ikenaga T, Ono F, Englert C, Cowan CA, Hukriede NA, Handin RI, and Davidson AJ
- Subjects
- Aging physiology, Animals, Animals, Genetically Modified, Cell Proliferation, Kidney injuries, Kidney metabolism, Larva, Models, Animal, Nephrons growth & development, Organogenesis, Stem Cell Transplantation, Kidney cytology, Kidney growth & development, Nephrons cytology, Regeneration physiology, Stem Cells cytology, Zebrafish growth & development
- Abstract
Loss of kidney function underlies many renal diseases. Mammals can partly repair their nephrons (the functional units of the kidney), but cannot form new ones. By contrast, fish add nephrons throughout their lifespan and regenerate nephrons de novo after injury, providing a model for understanding how mammalian renal regeneration may be therapeutically activated. Here we trace the source of new nephrons in the adult zebrafish to small cellular aggregates containing nephron progenitors. Transplantation of single aggregates comprising 10-30 cells is sufficient to engraft adults and generate multiple nephrons. Serial transplantation experiments to test self-renewal revealed that nephron progenitors are long-lived and possess significant replicative potential, consistent with stem-cell activity. Transplantation of mixed nephron progenitors tagged with either green or red fluorescent proteins yielded some mosaic nephrons, indicating that multiple nephron progenitors contribute to a single nephron. Consistent with this, live imaging of nephron formation in transparent larvae showed that nephrogenic aggregates form by the coalescence of multiple cells and then differentiate into nephrons. Taken together, these data demonstrate that the zebrafish kidney probably contains self-renewing nephron stem/progenitor cells. The identification of these cells paves the way to isolating or engineering the equivalent cells in mammals and developing novel renal regenerative therapies.
- Published
- 2011
- Full Text
- View/download PDF
24. Notch activates Wnt-4 signalling to control medio-lateral patterning of the pronephros.
- Author
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Naylor RW and Jones EA
- Subjects
- Animals, Embryo, Nonmammalian metabolism, Gene Expression Regulation, Developmental, Glycosyltransferases metabolism, Nephrons metabolism, Transcription Factors metabolism, Up-Regulation, Wnt4 Protein, Xenopus Proteins metabolism, Nephrons embryology, Receptors, Notch metabolism, Wnt Proteins metabolism, Xenopus laevis embryology
- Abstract
Previous studies have highlighted a role for the Notch signalling pathway during pronephrogenesis in the amphibian Xenopus laevis, and in nephron development in the mammalian metanephros, yet a mechanism for this function remains elusive. Here, we further the understanding of how Notch signalling patterns the early X. laevis pronephros anlagen, a function that might be conserved in mammalian nephron segmentation. Our results indicate that early phase pronephric Notch signalling patterns the medio-lateral axis of the dorso-anterior pronephros anlagen, permitting the glomus and tubules to develop in isolation. We show that this novel function acts through the Notch effector gene hrt1 by upregulating expression of wnt4. Wnt-4 then patterns the proximal pronephric anlagen to establish the specific compartments that span the medio-lateral axis. We also identified pronephric expression of lunatic fringe and radical fringe that is temporally and spatially appropriate for a role in regulating Notch signalling in the dorso-anterior region of the pronephros anlagen. On the basis of these results, along with data from previous publications, we propose a mechanism by which the Notch signalling pathway regulates a Wnt-4 function that patterns the proximal pronephric anlagen.
- Published
- 2009
- Full Text
- View/download PDF
25. Normal levels of p27 are necessary for somite segmentation and determining pronephric organ size.
- Author
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Naylor RW, Collins RJ, Philpott A, and Jones EA
- Abstract
The Xenopus laevis cyclin dependent kinase inhibitor p27(Xic1) has been shown to be involved in exit from the cell cycle and differentiation of cells into a quiescent state in the nervous system, muscle tissue, heart and retina. We show that p27(Xic1) is expressed in the developing kidney in the nephrostomal regions. Using overexpression and morpholino oligonucleotide (MO) knock-down approaches we show normal levels of p27(Xic1) regulate pronephros organ size by regulating cell cycle exit. Knock-down of p27(Xic1) expression using a MO prevented myogenesis, as previously reported; an effect that subsequently inhibits pronephrogenesis. Furthermore, we show that normal levels of p27(Xic1) are required for somite segmentation also through its cell cycle control function. Finally, we provide evidence to suggest correct paraxial mesoderm segmentation is not necessary for pronephric induction in the intermediate mesoderm. These results indicate novel developmental roles for p27(Xic1), and reveal its differentiation function is not universally utilised in all developing tissues.
- Published
- 2009
- Full Text
- View/download PDF
26. Bronchial adenoma resection with relief of hypoxic pulmonary vasoconstriction.
- Author
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Grant JL, Naylor RW, and Crandell WB
- Subjects
- Adenoma diagnostic imaging, Adult, Airway Obstruction diagnostic imaging, Airway Obstruction surgery, Bronchial Neoplasms diagnostic imaging, Humans, Hypoxia diagnostic imaging, Male, Pulmonary Circulation, Radionuclide Imaging, Reflex physiology, Ventilation-Perfusion Ratio, Adenoma surgery, Bronchial Neoplasms surgery, Hypoxia surgery, Vasoconstriction
- Abstract
Experimental airway obstruction is known to cause reflex pulmonary artery constriction, but clinical documentation of reversible bronchial obstruction and vasoconstriction is rare. A soft bronchial adenoma obstructed the left main bronchus, and scans showed minimal ventilation and perfusion on the left. Gas aspirated from beyond the tumor was hypoxic. The adenoma was removed and the lung left intact by means of a skin graft in the bronchial wall. Four months later, pulmonary function was normal, and both ventilation and perfusion of the left lung were normal. Reflex pulmonary vasoconstriction resulting from alveolar hypoxia minimizes systemic hypoxemia and also minimizes alveolar tissue hypoxia in the lung itself. The reflex is seen most frequently in perfusion scans in patients with chronic airways disease. This case in important in that it documents reversal of vasoconstriction after ventilation was restored.
- Published
- 1980
- Full Text
- View/download PDF
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