1. Antibody RING-Mediated Destruction of Endogenous Proteins
- Author
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Dimitris P. Xirodimas, Ronald T. Hay, David Dickerson, Adel F. M. Ibrahim, Michael H. Tatham, Naima Abidi, Alan R. Prescott, Linnan Shen, Centre de recherche en Biologie Cellulaire (CRBM), and Université Montpellier 2 - Sciences et Techniques (UM2)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Université Montpellier 1 (UM1)
- Subjects
Proteasome Endopeptidase Complex ,NEDD8 Protein ,[SDV]Life Sciences [q-bio] ,Endogeny ,nanobody-RING fusion ,Biology ,Protein degradation ,Article ,03 medical and health sciences ,0302 clinical medicine ,Ubiquitin ,Endopeptidases ,Humans ,Molecular Biology ,E3 ligase ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,0303 health sciences ,Messenger RNA ,RNF4 ,Ubiquitination ,Nuclear Proteins ,Cell Biology ,Single-Domain Antibodies ,Fusion protein ,Ubiquitin ligase ,Cell biology ,proteasome ,Proteasome ,Proteolysis ,protein degradation ,biology.protein ,ARMeD ,030217 neurology & neurosurgery ,HeLa Cells ,Transcription Factors - Abstract
Summary To understand gene function, the encoding DNA or mRNA transcript can be manipulated and the consequences observed. However, these approaches do not have a direct effect on the protein product of the gene, which is either permanently abrogated or depleted at a rate defined by the half-life of the protein. We therefore developed a single-component system that could induce the rapid degradation of the specific endogenous protein itself. A construct combining the RING domain of ubiquitin E3 ligase RNF4 with a protein-specific camelid nanobody mediates target destruction by the ubiquitin proteasome system, a process we describe as antibody RING-mediated destruction (ARMeD). The technique is highly specific because we observed no off-target protein destruction. Furthermore, bacterially produced nanobody-RING fusion proteins electroporated into cells induce degradation of target within minutes. With increasing availability of protein-specific nanobodies, this method will allow rapid and specific degradation of a wide range of endogenous proteins., Graphical Abstract, Highlights • Antibody RING-mediated destruction (ARMeD) targets endogenous proteins for degradation • ARMeD is mediated by a nanobody fused to the RING domain of ubiquitin E3 ligase RNF4 • Nanobody-RING fusions introduced into cells degrade target proteins within minutes, To study gene function, a single-component system that induces rapid degradation of the protein product of the gene was developed. Described as antibody RING-mediated destruction (ARMeD), a nanobody fused to the RING domain of ubiquitin E3 ligase RNF4 mediates degradation of the target protein by the ubiquitin proteasome system.
- Published
- 2020
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