1,476 results on '"N. HUNTER"'
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2. Relationship between erythema effective UV radiant exposure, total ozone, cloud cover and aerosols in southern England, UK
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N. Hunter, R. J. Rendell, M. P. Higlett, J. B. O'Hagan, and R. G. E. Haylock
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Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Evidence of an underlying trend in the dependence of erythema effective ultraviolet (UV) radiant exposure (Her) on changes in the total ozone, cloud cover and aerosol optical depth (AOD) has been studied using solar ultraviolet radiation measurements collected over a 25-year period (1991–2015) at Chilton in the south of England in the UK. The monthly mean datasets of these measures corrected for underlying seasonal variation were analysed. When a single linear trend was fitted over the whole study period between 1991 and 2015, the analyses revealed that the long-term variability of Her can be best characterised in two sub-periods (1991–2004 and 2004–2015), where the estimated linear trend was upward in the first period (1991–2004) but downward in the second period (2004–2015). Both cloud cover (CC) and total ozone (TO) were found to have a highly statistically significant influence on Her, but the influence of the AOD measure was very small. The radiation amplification factor (RAF) for the erythema action spectrum due to TO was −1.03 at constant levels of CC over the whole study period; that is, for a 1.0 % increase in TO, Her decreases by 1.03 %. Over the first period (1991–2004), the RAF related to CC was slightly higher at 0.97 compared to that for TO at 0.79. The proportion of the change in Her explained by the change in CC (47 %) was much greater than the proportion explained by changes in TO (8 %). For the second period (2004–2015), the pattern reversed, with the observed RAF related to TO being −1.25, almost double that of CC (−0.65). Furthermore, in this period the proportion of variation in Her explained by TO variation was 33 %, double that of CC at 16 %, while AOD changes had a negligible effect (1 %). When the data were examined separately for each season, for the first period (1991–2004) the greatest effect of TO and CC on Her (i.e. the largest RAF value) was found during spring. Spring was also the season during which TO and CC variation explained the greatest proportion of variability in Her (82 %). In the later period (2004–2015), the RAF and greatest influence of TO and CC were observed in winter (67 %) and the AOD effect explained a further 5 % variability in Her. This study provides evidence that both the increasing trend in Her for 1991–2004 and the decreasing trend in Her for 2004–2015 occur in response to variation in TO, which exhibits a small increasing tendency over these periods. CC plays a more important role in the increasing trend in Her for 1991–2004 than TO, whereas for 2004–2015, the decreasing trend in Her is less associated with changes in CC and AOD.
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- 2019
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3. Protecting effect of PrP codons M142 and K222 in goats orally challenged with bovine spongiform encephalopathy prions
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C. Fast, W. Goldmann, P. Berthon, K. Tauscher, O. Andréoletti, I. Lantier, C. Rossignol, A. Bossers, J. G. Jacobs, N. Hunter, M. H. Groschup, F. Lantier, and J. P. M. Langeveld
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Veterinary medicine ,SF600-1100 - Abstract
Abstract Breeding towards genetic resistance to prion disease is effective in eliminating scrapie. In sheep, classical forms of scrapie have been eradicated almost completely in several countries by breeding programs using a prion protein (PrP) gene (PRNP) amino acid polymorphism. For goats, field and experimental studies have provided evidence for several amino acid polymorphisms that are associated with resistance to scrapie, but only limited data are available concerning the susceptibility of caprine PRNP genotypes to BSE. In this study, goat kids representing five PRNP genotypes based on three polymorphisms (M142, Q211 and K222 and the wild type I142, R211 and Q222) were orally challenged with bovine or goat BSE. Wild type goats were killed with clinical signs between 24–28 months post inoculation (mpi) to both challenges, and goats with genotype R/Q211 succumbed between 29–36 mpi. I/M142 goats developed clinical signs at 44–45 mpi and M/M142 goats remained healthy until euthanasia at 48 mpi. None of the Q/K222 goats showed definite clinical signs. Taken together the highest attack ratios were seen in wild type and R/Q211 goats, and the lowest in I/M142, M/M142 and Q/K222. In all genotype groups, one or more goats remained healthy within the incubation period in both challenges and without detectable PrP deposition in the tissues. Our data show that both the K222 and M142 polymorphisms lengthen the incubation period significantly compared to wild type animals, but only K222 was associated with a significant increase in resistance to BSE infection after oral exposure to both BSE sources.
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- 2017
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4. Enhancing recovery: surgical techniques and rehabilitation strategies after direct anterior hip arthroplasty
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Alberto Di Martino, Christopher Keating, Michael J. Butsick, Daniela Platano, Lisa Berti, Louis N. Hunter, and Cesare Faldini
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Total hip arthroplasty ,Direct anterior approach ,Rehabilitation ,Orthopedic surgery ,RD701-811 - Abstract
Abstract Total hip arthroplasty (THA) is a common surgical procedure for hip joint pathologies, with the direct anterior approach (DAA) gaining popularity due to potential benefits in postoperative recovery. This review aims to provide a comprehensive analysis of rehabilitation strategies following DAA THA, focusing on surgical techniques, postoperative care, and outcomes. The evolution of the DAA to THA is discussed, highlighting historical advancements and comparisons with other surgical approaches. Surgical techniques and considerations specific to the DAA are detailed, including outcomes and complications compared to alternative approaches. The role of the surgical technique in influencing postoperative rehabilitation is explored, emphasizing the importance of optimizing surgical procedures for enhanced recovery. Postoperative care and rehabilitation models following DAA THA are examined, with a focus on the impacts of different rehabilitation protocols on patient outcomes. The review underscores the significance of tailored rehabilitation programs in promoting optimal recovery and patient satisfaction. Current evidence from recent studies, meta-analyses, and clinical trials is critically analyzed to provide insights into the effectiveness of postoperative rehabilitation strategies. The review identifies gaps in the existing literature and proposes recommendations for future research to improve rehabilitation protocols and enhance outcomes. In conclusion, this review highlights the importance of postoperative rehabilitation in the context of DAA THA. By synthesizing historical perspectives, current evidence, and future directions, the review offers a comprehensive understanding of rehabilitation strategies following DAA THA. The findings underscore the need for personalized rehabilitation programs and ongoing research to optimize postoperative recovery and improve outcomes in the field of THA.
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- 2024
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5. Computational Prediction of Structure, Function, and Interaction of Myzus persicae (Green Peach Aphid) Salivary Effector Proteins
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Thomas Waksman, Edmund Astin, S. Ronan Fisher, William N. Hunter, and Jorunn I. B. Bos
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computational biology ,effector proteins ,insect–plant interactions ,protein structure prediction ,Microbiology ,QR1-502 ,Botany ,QK1-989 - Abstract
Similar to plant pathogens, phloem-feeding insects such as aphids deliver effector proteins inside their hosts that act to promote host susceptibility and enable feeding and infestation. Despite exciting progress toward identifying and characterizing effector proteins from these insects, their functions remain largely unknown. The recent groundbreaking development in protein structure prediction algorithms, combined with the availability of proteomics and transcriptomic datasets for agriculturally important pests, provides new opportunities to explore the structural and functional diversity of effector repertoires. In this study, we sought to gain insight into the infection strategy used by the Myzus persicae (green peach aphid) by predicting and analyzing the structures of a set of 71 effector candidate proteins. We used two protein structure prediction methods, AlphaFold and OmegaFold, that produced mutually consistent results. We observed a wide continuous spectrum of structures among the effector candidates, from disordered proteins to globular enzymes. We made use of the structural information and state-of-the-art computational methods to predict M. persicae effector protein properties, including function and interaction with host plant proteins. Overall, our investigation provides novel insights into prediction of structure, function, and interaction of M. persicae effector proteins and will guide the necessary experimental characterization to address new hypotheses. [Graphic: see text] Copyright © 2024 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
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- 2024
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6. Climate change and its impact on health: a global collaborative learning model
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Harriet Okatch, Patricia A. Remshifski, Anita Fennessey, Haley Campbell, Sivia Barnoy, Jason Friedman, Stephen B. Kern, Rosemary Frasso, Cecilia Sorensen, Tami Bar-Shalita, and Louis N. Hunter
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climate change ,interprofessional ,healthcare ,curriculum ,international ,course development ,Medicine (General) ,R5-920 - Abstract
To address the health effects of climate change, leaders in healthcare have called for action to integrate climate adaptation and mitigation into training programs for health professionals. However, current educators may not possess sufficient climate literacy and the expertise to effectively include such content in their respective healthcare curricula. We, an international and interprofessional partnership, collaborated with experts to develop and deploy curriculum to increase health educators’ and graduate health profession students’ knowledge and competencies on climate change. In a tri-step process, the first phase included recruiting interested faculty members from two institutions and varying health professions. In phase two, faculty members collaborated to develop a faculty symposium on climate change including educational competencies required of health professions, practice standards, guidelines, and profession-specific content. Symposium outcomes included broader faculty member interest and commitment to create an interprofessional climate change course for healthcare graduate students. In phase three, course development resulted from collaboration between faculty members at the two institutions and faculty members from the Global Consortium on Climate and Health Education (GCCHE), with course objectives informed by GCCHE competencies. Climate experts and faculty members delivered the course content over a 10-week period to 30 faculty members and students representing seven health professions, who were surveyed (n = 13) for feedback. This course can serve as an example for international collaborators interested in developing climate change courses for health profession students. Lessons learned in this process include: climate change novice faculty members can develop impactful climate change courses; students and faculty members can be co-learners; diverse representation in course attendees enriches the learning experience; and collaboration is key.
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- 2024
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7. Ionic Liquid Coating‐Driven Nanoparticle Delivery to the Brain: Applications for NeuroHIV
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Christine M. Hamadani, Fakhri Mahdi, Anya Merrell, Jack Flanders, Ruofan Cao, Priyavrat Vashisth, Gaya S. Dasanayake, Donovan S. Darlington, Gagandeep Singh, Mercedes C. Pride, Wake G. Monroe, George R. Taylor, Alysha N. Hunter, Gregg Roman, Jason J. Paris, and Eden E. L. Tanner
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brain delivery ,cellular hitchhiking ,ionic liquids ,nanoparticles ,red blood cells ,Science - Abstract
Abstract Delivering cargo to the central nervous system (CNS) remains a pharmacological challenge. For infectious diseases such as HIV, the CNS acts as a latent reservoir that is inadequately managed by systemic antiretrovirals (ARTs). ARTs thus cannot eradicate HIV, and given CNS infection, patients experience neurological deficits collectively referred to as “neuroHIV”. Herein, the development of bioinspired ionic liquid‐coated nanoparticles (IL‐NPs) for in situ hitchhiking on red blood cells (RBCs) is reported, which enables 48% brain delivery of intracarotid arterial‐ infused cargo. Moreover, IL choline trans‐2‐hexenoate (CA2HA 1:2) demonstrates preferential accumulation in parenchymal microglia over endothelial cells post‐delivery. This study further demonstrates successful loading of abacavir (ABC), an ART that is challenging to encapsulate, into IL‐NPs, and verifies retention of antiviral efficacy in vitro. IL‐NPs are not cytotoxic to primary human peripheral blood mononuclear cells (PBMCs) and the CA2HA 1:2 coating itself confers notable anti‐viremic capacity. In addition, in vitro cell culture assays show markedly increased uptake of IL‐NPs into neural cells compared to bare PLGA nanoparticles. This work debuts bioinspired ionic liquids as promising nanoparticle coatings to assist CNS biodistribution and has the potential to revolutionize the delivery of cargos (i.e., drugs, viral vectors) through compartmental barriers such as the blood‐brain‐barrier (BBB).
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- 2024
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8. Rhs NADase effectors and their immunity proteins are exchangeable mediators of inter-bacterial competition in Serratia
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Martin Hagan, Genady Pankov, Ramses Gallegos-Monterrosa, David J. Williams, Christopher Earl, Grant Buchanan, William N. Hunter, and Sarah J. Coulthurst
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Science - Abstract
Abstract Many bacterial species use Type VI secretion systems (T6SSs) to deliver anti-bacterial effector proteins into neighbouring bacterial cells, representing an important mechanism of inter-bacterial competition. Specific immunity proteins protect bacteria from the toxic action of their own effectors, whilst orphan immunity proteins without a cognate effector may provide protection against incoming effectors from non-self competitors. T6SS-dependent Rhs effectors contain a variable C-terminal toxin domain (CT), with the cognate immunity protein encoded immediately downstream of the effector. Here, we demonstrate that Rhs1 effectors from two strains of Serratia marcescens, the model strain Db10 and clinical isolate SJC1036, possess distinct CTs which both display NAD(P)+ glycohydrolase activity but belong to different subgroups of NADase from each other and other T6SS-associated NADases. Comparative structural analysis identifies conserved functions required for NADase activity and reveals that unrelated NADase immunity proteins utilise a common mechanism of effector inhibition. By replicating a natural recombination event, we show successful functional exchange of CTs and demonstrate that Db10 encodes an orphan immunity protein which provides protection against T6SS-delivered SJC1036 NADase. Our findings highlight the flexible use of Rhs effectors and orphan immunity proteins during inter-strain competition and the repeated adoption of NADase toxins as weapons against bacterial cells.
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- 2023
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9. Department Of Treasury's Final Hydrogen Tax Credit Regulations Incorporate Significant Improvements From The Widely Contested Proposed Regulations
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Johnston, N. Hunter
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United States. Department of the Treasury -- Powers and duties ,Administrative procedure -- Laws, regulations and rules ,Tax credits -- Laws, regulations and rules ,Tax administration and procedure -- Laws, regulations and rules ,Energy industry -- Laws, regulations and rules ,Government regulation ,Business, international ,Small Business Regulatory Enforcement Fairness Act of 1996 ,Administrative Procedure Act ,Inflation Reduction Act of 2022 - Abstract
The Final Regulations offer taxpayers greater flexibility in claiming the credit, reducing risk and creating more certainty for investments in the domestic hydrogen industry. Because of these changes, the risk [...]
- Published
- 2025
10. Analysis of Adsorbed Polyphosphate Changes on Milled Titanium Dioxide, Using Low-Field Relaxation NMR and Photoelectron Spectroscopy
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Laura N. Elliott, David Austin, Richard A. Bourne, Ali Hassanpour, John Robb, John L. Edwards, Stephen Sutcliffe, and Timothy N. Hunter
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Electrochemistry ,General Materials Science ,Surfaces and Interfaces ,Condensed Matter Physics ,Spectroscopy - Published
- 2023
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11. Robust Gaussian process regression with a bias model.
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Chiwoo Park, David J. Borth, Nicholas S. Wilson, Chad N. Hunter, and Fritz J. Friedersdorf
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- 2022
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12. Irish groundwater vulnerability mapping and Groundwater Protection Schemes
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Lee, M., primary, Kelly, C., additional, Meehan, R., additional, Hickey, C., additional, and Williams, N. Hunter, additional
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- 2020
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13. Robust Gaussian Process Regression with a Bias Model.
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Chiwoo Park, David J. Borth, Nicholas S. Wilson, Chad N. Hunter, and Fritz J. Friedersdorf
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- 2020
14. Variable selection for Gaussian process regression through a sparse projection.
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Chiwoo Park, David J. Borth, Nicholas S. Wilson, and Chad N. Hunter
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- 2020
15. Small Molecule RBI2 Disrupts Ribosome Biogenesis through Pre-rRNA Depletion
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Schneider, Catherine E. Scull, Guy Twa, Yinfeng Zhang, Naiheng J. Yang, Robert N. Hunter, Corinne E. Augelli-Szafran, and David A.
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ribosome synthesis ,RNA polymerase ,transcription ,RNA decay - Abstract
Cancer cells are especially sensitive to perturbations in ribosome biogenesis as they rely on finely tuned protein homeostasis to facilitate their rapid growth and proliferation. While ribosome synthesis and cancer have a well-established relationship, ribosome biogenesis has only recently drawn interest as a cancer therapeutic target. In this study, we exploited the relationship between ribosome biogenesis and cancer cell proliferation by using a potent ribosome biogenesis inhibitor, RBI2 (Ribosome Biogenesis Inhibitor 2), to perturb cancer cell growth and viability. We demonstrate herein that RBI2 significantly decreases cell viability in malignant melanoma cells and breast cancer cell lines. Treatment with RBI2 dramatically and rapidly decreased ribosomal RNA (rRNA) synthesis, without affecting the occupancy of RNA polymerase I (Pol I) on the ribosomal DNA template. Next-generation RNA sequencing (RNA-seq) revealed that RBI2 and previously described ribosome biogenesis inhibitor CX-5461 induce distinct changes in the transcriptome. An investigation of the content of the pre-rRNAs through RT-qPCR revealed an increase in the polyadenylation of cellular rRNA after treatment with RBI2, constituting a known pathway by which rRNA degradation occurs. Northern blotting revealed that RBI2 does not appear to impair or alter rRNA processing. Collectively, these data suggest that RBI2 inhibits rRNA synthesis differently from other previously described ribosome biogenesis inhibitors, potentially acting through a novel pathway that upregulates the turnover of premature rRNAs.
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- 2023
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16. Coagulated Mineral Adsorbents for Dye Removal, and Their Process Intensification Using an Agitated Tubular Reactor (ATR)
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Alastair S. Tonge, David Harbottle, Simon Casarin, Monika Zervaki, Christel Careme, and Timothy N. Hunter
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anionic azo dye ,iron (oxy)hydroxide ,coagulation ,calcite ,bentonite ,talc ,Chemistry ,QD1-999 - Abstract
The aim of this study was to understand the efficacy of widely available minerals as dual-function adsorbers and weighter materials, for the removal of toxic azo-type textile dyes when combined with coprecipitation processes. Specifically, the adsorption of an anionic direct dye was measured on various mineral types with and without the secondary coagulation of iron hydroxide (‘FeOOH’) in both a bench-scale stirred tank, as well as an innovative agitated tubular reactor (ATR). Talc, calcite and modified bentonite were all able to remove 90–95% of the dye at 100 and 200 ppm concentrations, where the kinetics were fitted to a pseudo second-order rate model and adsorption was rapid (99% of the dye was achieved for all the coagulated systems, where additionally, they produced significantly enhanced settling rates and bed compression. The greatest settling rate (9 mm min−1) and solids content increase (450% w/w) were observed for the calcium carbonate system, which also displayed the most homogenous distribution. This system was selected for scale-up and benchmarking in the ATR. Dye removal and sediment dispersion in the ATR were enhanced with respect to the bench scale tests, although lower settling rates were observed due to the relatively high shear rate of the agitator. Overall, results highlight the applicability of these cost-effective minerals as both dye adsorbers and sludge separation modifiers to accelerate settling and compression in textile water treatment. Additionally, the work indicates the suitability of the ATR as a flexible, modular alternative to traditional stirred tank reactors.
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- 2021
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17. Teaching metacognition: Helping engineering students take ownership of their own learning.
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Patrick Cunningham, Holly M. Matusovich, Deirdre A. N. Hunter, and Rachel E. McCord
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- 2015
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18. FDA Approaches in Monitoring Drug Quality, Forces Impacting the Drug Quality, and Recent Alternative Strategies to Assess Quality in the US Drug Supply
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Philip J. Almeter, James T. Isaacs, Aaron N. Hunter, Bradley S. Henderson, Thomas Platt, Billie J. Mitchell, David Do, Alyssa B. Brainard, Joshua E. Brown, Rachael M. Stone, Bao-Han Nguyen, Matthew F. Warren, Smaran A. Bhaktawara, Megan N. Bossle, Lindsey M. Long, Stephanie P. Zapata, Cinnamon R. Larkin, Thomas A. Lyman, Seth A. Larkin, Jonathan A. Labuhn, Jeffrey W. Reynolds, Erin E. Schuler, Ryan W. Naseman, Gary L. Johnson, and Robert A. Lodder
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Drug Discovery ,Pharmaceutical Science - Abstract
Since the US Food and Drug Administration (FDA) began monitoring the quality of pharmaceutical manufacturing by enforcing current good manufacturing practices roughly 60 years ago, forces related to the global economy have changed, rendering the task of monitoring quality more difficult. Alternative strategies by groups like Valisure, LLC, and the University of Kentucky Drug Quality Study to monitor the quality of the currently circulated US drug supply through end-product testing and screening have resulted in several concerning findings. Given the successful approaches of identifying quality defects in pharmaceuticals by non-regulatory bodies, and considering the changing landscape and pressures on manufacturing, the FDA, large buying groups, and the US Department of Defense should consider these alternative strategies as a means to augment current regulatory activities.
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- 2022
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19. Developments in Pb-210 methodologies to provide chronologies for environmental change
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H. N. Hunter, C. J. B. Gowing, A. L. Marriott, J. H. Lacey, S. Dowell, and M. J. Watts
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Environmental Engineering ,Geochemistry and Petrology ,Environmental Chemistry ,General Medicine ,General Environmental Science ,Water Science and Technology - Abstract
Chronologies generated from core profiles to apply dates to environmental changes commonly use the measurement of the activity of radionuclides deposited and stratified with physical environmental material. The most commonly reported nuclide to define chronologies covering the last 150 years is Pb-210, for which accepted data processing methodologies in the literature have focussed on the constant rate of supply (CRS) model and the more recently published Bayesian Plum model. This short communication describes a validation approach using defined sediment layers referred to as ‘varve’ counting, which provide known points of reference to account for uncertainty between generated dates from each model using published Pb-210 measurements. A significant improvement in the chronologies was observed when applying reference date corrections to the models. This was shown to be essential in providing confidence in reported datasets and accuracy of predicted chronologies, which will better inform the interpretation of environmental change, e.g. sedimentation rates, climate change, pollution pathways and land degradation. Generated chronologies from both the CRS and Plum methods showed good agreement with the established varve dates (typically
- Published
- 2022
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20. An Unusual Presentation of Acute Respiratory Distress Syndrome (ARDS) Due to Adenovirus and Metapneumovirus
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D. Ravi, S. Ramakrishnan, F. Shaukat, S. Chetana Shanmukhappa, N. Hunter, M.A. Malik, and M. Schinlever
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- 2023
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21. A Case of Angioinvasive Gastrointestinal Mucormycosis With Duodenal Necrosis and Perforation
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N. Hunter, A. Kusnik, R. Sharma, L. Hatem, A. Chodos, P. Penmetsa, and Y. Levin
- Published
- 2023
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22. Kinetic Studies of Cs+ and Sr2+ Ion Exchange Using Clinoptilolite in Static Columns and an Agitated Tubular Reactor (ATR)
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Muhammad Yusuf Prajitno, Mohamad Taufiqurrakhman, David Harbottle, and Timothy N. Hunter
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agitated tubular reactor ,strontium ,caesium ,clinoptilolite ,ion exchange ,process intensification ,Chemistry ,QD1-999 - Abstract
Natural clinoptilolite was studied to assess its performance in removing caesium and strontium ions, using both static columns and an agitated tube reactor (ATR) for process intensification. Kinetic breakthrough curves were fitted using the Thomas and Modified Dose Response (MDR) models. In the static columns, the clinoptilolite adsorption capacity (qe) for 200 ppm ion concentrations was found to be ~171 and 16 mg/g for caesium and strontium, respectively, highlighting the poor material ability to exchange strontium. Reducing the concentration of strontium to 100 ppm, however, led to a higher strontium qe of ~48 mg/g (close to the maximum adsorption capacity). Conversely, halving the column residence time to 15 min decreased the qe for 100 ppm strontium solutions to 13–14 mg/g. All the kinetic breakthrough data correlated well with the maximum adsorption capacities found in previous batch studies, where, in particular, the influence of concentration on the slow uptake kinetics of strontium was evidenced. For the ATR studies, two column lengths were investigated (of 25 and 34 cm) with the clinoptilolite embedded directly into the agitator bar. The 34 cm-length system significantly outperformed the static vertical columns, where the adsorption capacity and breakthrough time were enhanced by ~30%, which was assumed to be due to the heightened kinetics from shear mixing. Critically, the increase in performance was achieved with a relative process flow rate over twice that of the static columns.
- Published
- 2021
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23. Interactions between 2′-fluoro-(carbamoylpyridinyl)deschloroepibatidine analogues and acetylcholine-binding protein inform on potent antagonist activity against nicotinic receptors
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Renata V. Bueno, Samuel Davis, Alice Dawson, Pauline W. Ondachi, F. Ivy Carroll, and William N. Hunter
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Pyridines ,Structural Biology ,Humans ,Receptors, Nicotinic ,Bridged Bicyclo Compounds, Heterocyclic ,Carrier Proteins ,Acetylcholine - Abstract
Low-nanomolar binding constants were recorded for a series of six 2′-fluoro-(carbamoylpyridinyl)deschloroepibatidine analogues with acetylcholine-binding protein (AChBP). The crystal structures of three complexes with AChBP reveal details of molecular recognition in the orthosteric binding site and imply how the other three ligands bind. Comparisons exploiting AChBP as a surrogate for α4β2 and α7 nicotinic acetylcholine receptors (nAChRs) suggest that the key interactions are conserved. The ligands interact with the same residues as the archetypal nAChR agonist nicotine yet display greater affinity, thereby rationalizing their in vivo activity as potent antagonists of nicotine-induced antinociception. An oxyanion-binding site is formed on the periphery of the AChBP orthosteric site by Lys42, Asp94, Glu170 and Glu210. These residues are highly conserved in the human α4, β2 and α7 nAChR sequences. However, specific sequence differences are discussed that could contribute to nAChR subtype selectivity and in addition may represent a point of allosteric modulation. The ability to engage with this peripheral site may explain, in part, the function of a subset of ligands to act as agonists of α7 nAChR.
- Published
- 2022
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24. Inhibitors of HIV-1 Nef-Mediated Activation of the Myeloid Src-Family Kinase Hck Block HIV-1 Replication in Macrophages and Disrupt MHC-I Downregulation
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Lori A. Emert-Sedlak, Omar Moukha-Chafiq, Haibin Shi, Shoucheng Du, John J. Alvarado, Vibha Pathak, Samuel G. Tanner, Robert N. Hunter, Miranda Nebane, Li Chen, Tatiana V. Ilina, Rieko Ishima, Sixue Zhang, Yury V. Kuzmichev, Elizabeth R. Wonderlich, Susan M. Schader, Corinne E. Augelli-Szafran, Roger G. Ptak, and Thomas E. Smithgall
- Subjects
src-Family Kinases ,Infectious Diseases ,Macrophages ,HIV-1 ,Down-Regulation ,Virus Replication ,Article - Abstract
HIV-1 Nef is an attractive target for antiretroviral drug discovery because of its roles promoting HIV-1 infectivity, replication, and host immune system avoidance. Here we applied a screening strategy in which recombinant HIV-1 Nef protein was coupled to activation of the Src-family tyrosine kinase Hck, which enhances the HIV-1 life cycle in macrophages. Nef stimulates recombinant Hck activity in vitro, providing a robust assay for chemical library screening. High-throughput screening of more than 730,000 compounds using the Nef•Hck assay identified six unique hit compounds that bound directly to recombinant Nef by SPR in vitro and inhibited HIV-1 replication in primary macrophages in the 0.04 to 5 μM range without cytotoxicity. Eighty-four analogs were synthesized around an isothiazolone scaffold from this series, many of which bound to recombinant Nef and inhibited HIV-1 infectivity in the low to submicromolar range. Compounds in this series restored MHC-I to the surface of HIV-infected primary cells and disrupted a recombinant protein complex of Nef with the C-terminal tail of MHC-I and the μ1 subunit of the AP-1 endocytic trafficking protein. Nef inhibitors in this class have the potential to block HIV-1 replication in myeloid cells and trigger recognition of HIV-infected cells by the adaptive immune system in vivo.
- Published
- 2022
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25. Ionic Liquid Coating-Driven Nanoparticle Delivery to the Brain: Applications for NeuroHIV
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Christine M. Hamadani, Fakhri Mahdi, Anya Merrell, Jack Flanders, Ruofan Cao, Priyavrat Vashisth, Mercedes C. Pride, Alysha N. Hunter, Gagandeep Singh, Gregg Roman, Jason J. Paris, and Eden E. L. Tanner
- Abstract
Delivering cargo to the central nervous system (CNS) remains a pharmacological challenge. For infectious diseases such as HIV, the CNS acts as a latent reservoir that is inadequately managed by systemic antiretrovirals (ARTs). ARTs thus cannot eradicate HIV, and given CNS infection, patients experience an array of neurological deficits that are collectively referred to as ‘neuroHIV’. Herein we report the development of bioinspired ionic liquid-coated nanoparticles (IL-NPs) for in situ hitchhiking on red blood cells (RBCs), which enabled 48% delivery of intravenously infused cargo to the brain. Moreover, the ionic liquid (IL) choline trans-2-hexenoate (CA2HA 1:2) demonstrated preferential accumulation in parenchymal microglia over endothelial cells post-delivery. We further demonstrate the successful loading of abacavir (ABC), an ART that is challenging to encapsulate, into the IL-coated NPs and verify the retention of antiviral efficacy in vitro. IL-NPs were not cytotoxic to primary human peripheral blood mononuclear cells (PBMCs) and the CA2HA 1:2 coating conferred notable anti-viremic capacity on its own. In addition, in vitro cell culture assays showed markedly increased uptake of IL-coated nanoparticles into neuronal cells compared to bare nanoparticles. This work debuts bioinspired ionic liquids as promising nanoparticle coatings to assist CNS biodistribution and has the potential to revolutionize the delivery of cargos (i.e., drugs, viral vectors) through compartmental barriers such as the blood-brain-barrier (BBB), illustrated in the graphical abstract below.
- Published
- 2023
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26. Amphiphilic Block Copolymers as Dual Flocculation-Flotation Agents for Rapid Solid-Liquid Separation of Radioactive Wastes
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Alexander Peter Geoffrey Lockwood, Georgina Wadsley, Nicholas J. Warren, Jeffrey Peakall, Grant B. Webber, Erica J. Wanless, Dominic Rhodes, Martyn Graham Barnes, David Harbottle, and Timothy N. Hunter
- Published
- 2023
- Full Text
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27. KMT2A-D pathogenicity, prevalence, and variation according to a population database
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Jenna K. Larson, DeVon N. Hunter‐Schlichting, Erin L. Crowgey, Lauren J. Mills, Todd E. Druley, and Erin L. Marcotte
- Subjects
Cancer Research ,Oncology ,Radiology, Nuclear Medicine and imaging - Abstract
The KMT2 family of genes is essential epigenetic regulators promoting gene expression. The gene family contains three subgroups, each with two paralogues: KMT2A and KMT2B; KMT2C and KMT2D; KMT2F and KMT2G. KMT2A-D are among the most frequent somatically altered genes in several different cancer types. Somatic KMT2A rearrangements are well-characterized in infant leukemia (IL), and growing evidence supports the role of additional family members (KMT2B, KMT2C, and KMT2D) in leukemogenesis. Enrichment of rare heterozygous frameshift variants in KMT2A and C has been reported in acute myeloid leukemia (AML), IL, and solid tumors. Currently, the non-synonymous variation, prevalence, and penetrance of these four genes are unknown.This study determined the prevalence of pathogenic/likely pathogenic (P/LP) germline KMT2A-D variants in a cancer-free adult population from the Genome Aggregation Database (gnomAD). Two methods of variant interpretation were utilized: a manual genomic variant interpretation and an automated ACMG pipeline.The ACMG pipeline identified considerably fewer P/LP variants (n = 89) compared to the manual method (n = 660) in all 4 genes. Consequently, the total P/LP prevalence and allele frequency (AF) were higher in the manual method (1:112, AF = 4.46E-03) than in ACMG (1:832, AF = 6.01E-04). Multiple ancestry-exclusive P/LP variants were identified along with an increased frequency in males compared to females. Many of these variants identified in this population database are also associated with severe juvenile conditions.These data demonstrate that putatively functional germline variation in these developmentally important genes is more common than previously appreciated and identification in cancer-free adults may indicate incomplete penetrance for many of these variants. Future research should examine a genetic predisposing role in IL and other pediatric cancers.
- Published
- 2022
28. 13 FIGHTING FRAILTY FROM FOUNDATION UP
- Author
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W McKeown, R Kelly, R Eakin, and N Hunter
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Aging ,General Medicine ,Geriatrics and Gerontology - Abstract
Background In 2021 the UK Foundation Programme introduced a new curriculum for UK Foundation Doctors (FDs). For the first time, frailty has been designated as a core learning topic. This means that all FDs are expected to undertake dedicated frailty training. Subsequently, a virtual frailty workshop was developed and delivered by Zoom to all F2 doctors in Northern Ireland. Entitled ‘Taking a Better Approach to the Frailer Adult’, the three hour workshop familiarises FDs with core frailty concepts including Comprehensive Geriatric Assessment (CGA), delirium, and deprescribing. Methods All attendees completed an online survey after workshops. They were asked to provide free text comments about what they felt were the most successful and useful aspects of the workshop. Attendees were also were asked to numerically rate the workshop relevance, handout quality and venue suitability. Results The frailty workshop was delivered to 222 F2 doctors over eight months. On average, attendees rated the relevance of the workshop as 4.8/5. Attendees rated the quality of the handouts and the venue suitability at 4.4/5 and 4.2/5 respectively. Thematic analysis of qualitative feedback on the most successful elements of the workshop showed that attendees found the session to be useful, relevant, and engaging, with particular preference for use of cases. For example, one attendee wrote that, ‘use of cases and breakout rooms to discuss CGA [allowed] us to get a feel of how this applies to patients in clinical settings”. Thematic analysis of qualitative feedback on what could be done to make the workshop better showed attendees had preferences for greater use of cases and smaller breakout rooms. This feedback was used to develop and improve the workshop. Conclusion FDs value teaching on frailty and consider it highly relevant for clinical practice. Frailty education can be delivered successfully in a virtual setting. Junior doctors prefer interactive case based learning, with use of breakout rooms with small numbers of participants in each room.
- Published
- 2022
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29. Deterministic walks with choice.
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Katy E. Beeler, Kenneth S. Berenhaut, Joshua N. Cooper, Meagan N. Hunter, and Peter S. Barr
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- 2014
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30. A chemically tailored capacitive deionization system for the enhanced removal of cesium from process water
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Jiming Lu, Qiurong Long, Yi Liu, Binda Lu, Jiaxin Hu, Fan Yang, Feng Jiang, Timothy N. Hunter, Zhouguang Lu, David Harbottle, and Zhenghe Xu
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Filtration and Separation ,Analytical Chemistry - Published
- 2023
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31. Thiol-rich and ion-imprinted alginate hydrogel as a highly adsorptive and recyclable filtration membrane for rapid and selective Sr(II) removal
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Botuo Zheng, Jiajia Yin, Lingdan Zhu, Bingnan Zhou, Hang Shen, David Harbottle, Timothy N. Hunter, Yu Sheng, Deqin Zhu, and Huagui Zhang
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General Chemical Engineering ,Environmental Chemistry ,General Chemistry ,Industrial and Manufacturing Engineering - Published
- 2023
- Full Text
- View/download PDF
32. A nonhuman primate model of human non-suicidal self-injury: serotonin-transporter genotype-mediated typologies
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Melanie L. Schwandt, Ryno Kruger, Stephen J. Suomi, James C. Harris, Elizabeth K. Wood, Leslie Neville, Stephen G. Lindell, Jacob N. Hunter, Stephen M. Day, David Goldman, J. Dee Higley, Jaclyn P. Day, and Christina S. Barr
- Subjects
Serotonin ,Genotype ,Population ,Physiology ,Adrenocorticotropic hormone ,Article ,03 medical and health sciences ,0302 clinical medicine ,Adrenocorticotropic Hormone ,Animals ,Humans ,Medicine ,Allele ,education ,Serotonin transporter ,Serotonin Plasma Membrane Transport Proteins ,Pharmacology ,education.field_of_study ,biology ,business.industry ,Macaca mulatta ,Nonhuman primate ,030227 psychiatry ,Psychiatry and Mental health ,Plasma cortisol ,biology.protein ,Etiology ,business ,Self-Injurious Behavior ,030217 neurology & neurosurgery - Abstract
While non-suicidal self-injury (NSSI) occurs in the general population at a surprisingly high rate, with higher rates among certain clinical populations, its etiology is not well-understood. Consequently, the DSM-5 lists NSSI as requiring further research. This study utilizes a translational model of naturally-occurring NSSI to assess the role of early parental neglect and variation in the serotonin transporter genotype (5-HTT) in the etiology of NSSI. Subjects (N = 161) were rhesus macaques (Macaca mulatta) reared in one of three conditions (mother-reared (MR), peer-reared (PR), or surrogate peer-reared (SPR)), and classified as NSSI (n = 18) or non-NSSI (n = 143). Subjects were genotyped for 5-HTT and their behaviors were recorded during an ecologically-meaningful, stress-evoking, intruder paradigm. Two weeks prior to testing, blood samples were obtained and assayed for plasma cortisol and adrenocorticotropic hormone (ACTH) concentrations. NSSI subjects were more likely to be SPR, paralleling human studies showing that individuals that exhibit NSSI tend to have experienced abuse or neglect early in life. Results also indicated that variation in the 5-HTT genotype differentiated the NSSI subjects. NSSI subjects that were homozygous for the L allele exhibited high plasma ACTH and high rates of stress-induced stereotypies; whereas NSSI subjects with the s allele exhibited impulsive behaviors, including frequently approaching the potentially dangerous intruder, high rates of aggressive vocal threats, and more activity. These results suggest that there may be different 5-HTT genotype-mediated NSSI typologies and that both early experiences and variation in the 5-HTT genotype may be important factors in understanding the etiology of NSSI.
- Published
- 2021
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33. Parental genetic contributions to neonatal temperament in a nonhuman primate ( Macaca mulatta ) model
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Stephen J. Suomi, Joseph A. Olsen, Laura Almasy, Elizabeth K. Wood, Stephen G. Lindell, J. Dee Higley, Daniel B. Kay, Jacob N. Hunter, David Goldman, and Christina S. Barr
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Male ,Surgency ,media_common.quotation_subject ,Mothers ,Context (language use) ,Article ,Negative affectivity ,Developmental psychology ,Extraversion, Psychological ,Fathers ,03 medical and health sciences ,Behavioral Neuroscience ,0302 clinical medicine ,Developmental Neuroscience ,Developmental and Educational Psychology ,Animals ,Humans ,0501 psychology and cognitive sciences ,Temperament ,media_common ,Extraversion and introversion ,05 social sciences ,Heritability ,Macaca mulatta ,Nonhuman primate ,Female ,Analysis of variance ,Psychology ,030217 neurology & neurosurgery ,050104 developmental & child psychology ,Developmental Biology - Abstract
Temperament is an individual’s nature and is widely believed to have a heritable foundation. Few studies, however, have evaluated paternal and maternal contributions to the triadic dimensions of temperament. Rhesus monkeys are widely utilized to model genetic contributions to human development due to their close genetic-relatedness and common temperament structure, providing a powerful translational model for investigating paternal and maternal genetic influences on temperament. The temperament of rhesus monkey infants born to 19 different sires and 50 different dams was assessed during the first month of life by comparing the temperament of paternal or maternal half-siblings reared with their mothers in species-normative conditions or reared in a neonatal nursery. Factor scores from three dimensions of temperament were obtained (Orienting/Regulation, Negative Affectivity, and Surgency/Extraversion) and ANOVAs were used to assess genetic effects. For paternal half-siblings, results showed a statistically significant paternal contribution to Orienting/Regulation, Negative Affectivity, and Surgency/Extraversion factor scores. For maternal half-siblings, results showed a statistically significant contribution to Orienting/Regulation factor scores. When parsed by early rearing condition, results showed a paternal contribution Orienting/Regulation, Negative Affectivity, and Surgency/Extraversion scores for paternal half-siblings reared in the neonatal nursery, while there was only a paternal contribution to Surgency/Extraversion for paternal half-siblings reared by their mothers. There was only a maternal contribution to Orienting/Regulation for maternal half-siblings reared by their mothers. These results show that paternal and maternal contributions to temperament vary by environmental context, and that mothers may environmentally buffer their infants from paternal contributions to their temperament.
- Published
- 2021
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34. Delineating the activity of the potent nicotinic acetylcholine receptor agonists (+)-anatoxin-a and (-)-hosieine-A
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Holly P. Parker, Alice Dawson, Mathew J. Jones, Rui Yan, Jie Ouyang, Ran Hong, and William N. Hunter
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Cyanobacteria Toxins ,Biophysics ,Receptors, Nicotinic ,Condensed Matter Physics ,Crystallography, X-Ray ,Ligands ,Biochemistry ,Heterocyclic Compounds, 4 or More Rings ,Acetylcholine ,Structural Biology ,Genetics ,Humans ,Nicotinic Agonists ,Carrier Proteins ,Tropanes - Abstract
The affinity and thermodynamic parameters for the interactions of two naturally occurring neurotoxins, (+)-anatoxin-a and (−)-hosieine-A, with acetylcholine-binding protein were investigated using a fluorescence-quenching assay and isothermal titration calorimetry. The crystal structures of their complexes with acetylcholine-binding protein from Aplysia californica (AcAChBP) were determined and reveal details of molecular recognition in the orthosteric binding site. Comparisons treating AcAChBP as a surrogate for human α4β2 and α7 nicotinic acetylcholine receptors (nAChRs) suggest that the molecular features involved in ligand recognition and affinity for the protein targets are conserved. The ligands exploit interactions with similar residues as the archetypal nAChR agonist nicotine, but with greater affinity. (−)-Hosieine-A in particular has a high affinity for AcAChBP driven by a favorable entropic contribution to binding. The ligand affinities help to rationalize the potent biological activity of these alkaloids. The structural data, together with comparisons with related molecules, suggest that there may be opportunities to extend the hosieine-A scaffold to incorporate new interactions with the complementary side of the orthosteric binding site. Such a strategy may guide the design of new entities to target human α4β2 nAChR that may have therapeutic benefit.
- Published
- 2022
35. Flotation using sodium dodecyl sulphate and sodium lauroyl isethionate for rapid dewatering of Mg(OH)2 radwaste suspensions
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Thomas Barber, Martyn Barnes, Nabil Basharat, Nicholas J. Warren, Alexander P. G. Lockwood, David Harbottle, G Randall, Timothy N. Hunter, Jeff Peakall, and Philip Kok Shun
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chemistry.chemical_classification ,Chromatography ,General Chemical Engineering ,Sodium ,Salt (chemistry) ,chemistry.chemical_element ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Dewatering ,0104 chemical sciences ,Adsorption ,chemistry ,Monolayer ,Static light scattering ,Freundlich equation ,Particle size ,0210 nano-technology - Abstract
Mg(OH)2 suspensions were floated utilising sodium dodecyl sulphate (SDS) and sodium lauroyl isethionate (SLI) collectors, for rapid dewatering of radwaste suspensions. Freundlich adsorption isotherms were first used to compare the adsorption densities of SDS and SLI on Mg(OH)2 surfaces, to determine the maximum monolayer coverage capacity, and were found to be 0.11 μmol m−2 at a dosed concentration of 172 μM for SDS and 0.05 μmol m−2 at a dosed concentration of 188 μM for SLI. The natural and salt induced coagulation kinetics of Mg(OH)2 were examined using static light scattering, where the influence of collector adsorption on particle size distributions was also investigated, to probe potential hydrodynamic limitations of flotation. Particle stabilised foam formation was then characterised using a Bikerman column test, where the dynamic foamability indices (DFIs) of SDS and SLI were determined to be 49 × 103 s L mol−1 and 321 × 103 s L mol−1 respectively. Flotation performance was measured, and a collection efficiency factor used to compare the solid–liquid separation ability of mixed 2.5 vol% suspensions with SDS or SLI, as well as MIBC frother. Optimal performance aligned with collector concentrations relating to predicted maximum monolayer coverage, and whilst both surfactants were effective, SDS systems performed better than SLI in all metrics. Recoveries of >80% of the Mg(OH)2 wastes were achieved, whilst only transferring 35% of the water mass at the optimum SDS dosed concentration of 82 μM, likely due to its denser surface adsorption and minimised lamella water entrainment.
- Published
- 2021
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36. Reduction in Dynamics of Base pair Opening upon Ligand Binding by the Cocaine-Binding Aptamer
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Devid Garaev, Philip E. Johnson, Howard N. Hunter, and Zachary R. Churcher
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0303 health sciences ,Base pair ,Aptamer ,Dynamics (mechanics) ,Biophysics ,Articles ,Aptamers, Nucleotide ,Ligands ,03 medical and health sciences ,Crystallography ,chemistry.chemical_compound ,0302 clinical medicine ,Cocaine ,chemistry ,Nucleic Acid Conformation ,Magnetization transfer ,Binding site ,Base Pairing ,Protein secondary structure ,030217 neurology & neurosurgery ,DNA ,030304 developmental biology ,Cocaine binding - Abstract
We have used magnetization transfer NMR experiments to measure the exchange rate constant (kex) of the imino protons in the unbound, cocaine-bound, and quinine-bound forms of the cocaine-binding DNA aptamer. Both long-stem 1 (MN4) and short-stem 1 (MN19) variants were analyzed, corresponding to structures with a prefolded secondary structure and ligand-induced-folding versions of this aptamer, respectively. The kex values were measured as a function of temperature from 5 to 45°C to determine the thermodynamics of the base pair opening for MN4. We find that the base pairs close to the ligand-binding site become stronger upon ligand binding, whereas those located away from the binding site do not strengthen. With the buffer conditions used in this study, we observe imino 1H signals in MN19 not previously seen, which leads us to conclude that in the free form, both stem 2 and parts of stem 3 are formed and that the base pairs in stem 1 become structured or more rigid upon binding. This is consistent with the kex values for MN19 decreasing in both stem 1 and at the ligand-binding site. Based on the temperature dependence of the kex values, we find that MN19 is more dynamic than MN4 in the free and both ligand-bound forms. For MN4, ligand-binding results in the reduction of dynamics that are localized to the binding site. These results demonstrate that an aptamer in which the base pairs are preformed also experiences a reduction in dynamics with ligand binding.
- Published
- 2020
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37. GSK3β inhibition restores cortical gamma oscillation and cognitive behavior in a mouse model of NMDA receptor hypofunction relevant to schizophrenia
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Kazuhito Nakao, Bailey C Hagler, Chander Raman, John J. Hablitz, Robert N. Hunter, Kiran Sapkota, Kazu Nakazawa, and Mahendra Singh
- Subjects
Neurophysiology ,Spatial memory ,Receptors, N-Methyl-D-Aspartate ,Article ,03 medical and health sciences ,Glycogen Synthase Kinase 3 ,Mice ,0302 clinical medicine ,Cognition ,medicine ,Animals ,GSK3A ,GSK3B ,Prepulse inhibition ,030304 developmental biology ,Pharmacology ,Mice, Knockout ,0303 health sciences ,Glycogen Synthase Kinase 3 beta ,Chemistry ,medicine.disease ,Psychiatry and Mental health ,Schizophrenia ,Knockout mouse ,Cognitive control ,GABAergic ,NMDA receptor ,Neuroscience ,030217 neurology & neurosurgery - Abstract
Cortical gamma oscillations are believed to be involved in mental processes which are disturbed in schizophrenia. For example, the magnitudes of sensory-evoked oscillations, as measured by auditory steady-state responses (ASSRs) at 40 Hz, are robustly diminished, whereas the baseline gamma power is enhanced in schizophrenia. Such dual gamma oscillation abnormalities are also present in a mouse model of N-methyl-D-aspartate receptor hypofunction (Ppp1r2cre/Grin1 knockout mice). However, it is unclear whether the abnormal gamma oscillations are associated with dysfunction in schizophrenia. We found that glycogen synthase kinase-3 (GSK3) is overactivated in corticolimbic parvalbumin-positive GABAergic interneurons in Grin1 mutant mice. Here we addressed whether GSK3β inhibition reverses both abnormal gamma oscillations and behavioral deficits with high correlation by pharmacological and genetic approach. We demonstrated that the paralog selective-GSK3β inhibitor, but not GSK3α inhibitor, normalizes the diminished ASSRs, excessive baseline gamma power, and deficits in spatial working memory and prepulse inhibition (PPI) of acoustic startle in Grin1 mutant mice. Cell-type specific GSK3B knockdown, but not GSK3A knockdown, also reversed abnormal gamma oscillations and behavioral deficits. Moreover, GSK3B knockdown, but not GSK3A knockdown, reverses the mutants’ in vivo spike synchrony deficits. Finally, ex vivo patch-clamp recording from pairs of neighboring cortical pyramidal neurons showed a reduction of synchronous spontaneous inhibitory-postsynaptic-current events in mutants, which was reversed by GSK3β inhibition genetically and pharmacologically. Together, GSK3β inhibition in corticolimbic interneurons ameliorates the deficits in spatial working memory and PPI, presumably by restoration of synchronous GABA release, synchronous spike firing, and evoked-gamma power increase with lowered baseline power.
- Published
- 2020
38. Characterization of Slate Powder Wastes from Minas Gerais - Brazil
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Timothy N. Hunter, Luciana Boaventura Palhares, Felipe Ferreira Binda, and Cláudio Gouvêa dos Santos
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Waste management ,Mechanics of Materials ,Mechanical Engineering ,021105 building & construction ,0211 other engineering and technologies ,Environmental science ,General Materials Science ,02 engineering and technology ,Raw material ,021001 nanoscience & nanotechnology ,0210 nano-technology ,Building construction ,Characterization (materials science) - Abstract
Research and development related to the processing of recycled materials has grown progressively in recent times, as scientists endeavour to integrate sustainability criteria, depletion of natural resources, reducing the energy of technological processes involving extraction and processing of raw materials, etc. When it comes to processing slate, industries have to pass over several steps ranging from the extraction of rock blocks until the final products consisting of plates, leaving behind a considerable amount of waste in the form of a mud composed mainly of water, lubricants and crushed rock. This waste with no defined destination accumulates in yards, reservoirs and streams, affecting the environment. Slate powder has great prospects for recovery, recycling and further applications once it has chemical composition and components similar to raw materials used in ceramic and building construction industries. Therefore, a complete characterization of this powder is important and here we present some results of XRD, SEM, EDS, G3 morphology and thermal analysis of slate powder samples from the southeastern state of Minas Gerais in Brazil.
- Published
- 2020
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39. The NF1 pathogenic mutational spectrum and variant interpretation from 134,187 individuals in a population database
- Author
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DeVon N. Hunter-Schlichting, Lauren J. Mills, Erin L. Crowgey, Gregory B. Marsh, Christopher L. Moertel, and Erin L. Marcotte
- Abstract
Genetic disorders are historically defined through phenotype-first approaches. However, risk estimates derived from phenotype-linked ascertainment may overestimate severity and penetrance. NF1 is a large tumor suppressor gene and related disorders are characterized by several major features, age of onset, variability of severity and occurrence of complications. Pathogenic variants are associated with increased risks of rare and common neoplasms and a large array of clinical phenotypes in adults and children. This study compared two variant interpretation approaches: a publicly available population schematic and the clinical gold standard of the ACMG criteria. The population utilized 134,187 individuals who were ascertained to not have cancer in a cancer study from gnomAD (v2.1). A total of 103 pathogenic and 20 likely pathogenic short variants were identified in the population approach and 6 pathogenic and 13 likely pathogenic were identified through the ACMG criteria. Fifty pathogenic variants were identified to have been previously published with associated clinical phenotypes. Malignant tumors and hematologic malignancies such as rhabdomyosarcomas, malignant peripheral nerve sheath tumors, Watson Syndrome, Familial Spinal NF1, optic glioma and JMML were the most severe phenotypes identified. The recent inclusion of genetic testing in the clinical diagnosis of NF1 syndrome increases the need to fully understand the full scope of genotype-phenotype correlations associated with pathogenic NF1 variants across ethnicities. The ascertainment of individuals with germline pathogenic NF1 variants in this analysis highlights cases with potentially increased personal adult-onset cancer risk and unknown reproductive risk of hereditary juvenile-onset cancers.
- Published
- 2022
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40. 205P VERITAC update: Phase II study of ARV-471, a PROteolysis TArgeting Chimera (PROTAC) estrogen receptor (ER) degrader in ER+/human epidermal growth factor receptor 2 (HER2)- advanced breast cancer
- Author
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S.A. Hurvitz, A. Schott, C.X. Ma, R. Nanda, G. Zahrah, N. Hunter, A. Tan, M.L. Telli, J. Anampa, R. Jeselsohn, P. Munster, E. Zhi, R. Gedrich, C. Mather, H. Han, and E. Hamilton
- Subjects
Cancer Research ,Oncology - Published
- 2023
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41. Influence of flake size and electrolyte conditions on graphene oxide adsorption of ionic dyes
- Author
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James M. Exley, Timothy N. Hunter, Thomas Pugh, and Martin R. Tillotson
- Subjects
General Chemical Engineering - Published
- 2023
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- View/download PDF
42. TarO: a target optimisation system for structural biology.
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Ian M. Overton, C. A. Johannes van Niekerk, Lester G. Carter, Alice Dawson, David M. A. Martin, Scott Cameron, Stephen A. McMahon, Malcolm F. White, William N. Hunter, James H. Naismith, and Geoffrey J. Barton
- Published
- 2008
- Full Text
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43. Intra-Lot and Inter-Lot Variability in Cosyntropin
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Philip J, Almeter, James T, Isaacs, Aaron N, Hunter, Bradley S, Henderson, and Robert A, Lodder
- Subjects
Article - Abstract
Intra-lot and inter-lot variability in cosyntropin was detected in the DQS using Fourier transform near-infrared spectrometry. One vial of 12 sampled from Sandoz Lot0200062 appeared 6.9 SDs from the center of the rest of the vials, and another was 4.3 SDs away. Spectra of 102 vials from 7 lots in the library clustered in two groups (p=0.02).
- Published
- 2022
44. Cardiac Positron Emission Tomography Basics
- Author
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Chad R. R. N. Hunter and Robert A. deKemp
- Published
- 2022
- Full Text
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45. Potential Process Control Issues with Pemetrexed
- Author
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James T, Isaacs, Philip J, Almeter, Bradley S, Henderson, Aaron N, Hunter, Thomas L, Platt, and Robert A, Lodder
- Subjects
integumentary system ,Article - Abstract
Pemetrexed is a folate analog metabolic inhibitor used in treatment of locally advanced or metastatic nonsquamous non-small cell lung cancer and for mesothelioma. Intra-lot and inter-lot variability in the spectra of ALIMTA® was detected in the Drug Quality Study (DQS) using Fourier transform near-infrared spectrometry (FTNIR). One vial of 12 (8%) sampled from lot S20I013A appeared 3.0 multidimensional SDs from the other vials, suggesting that it represents a different material. Consequently, additional spectra from other lots were analyzed. Spectra of 147 vials from 23 lots in the spectral library contained 14 vials that were outside the main group (26.4 SDs using a subcluster detection test), suggesting that the 14 library vials (9.5% of the total) also contain differing materials.
- Published
- 2022
- Full Text
- View/download PDF
46. The enteric pathogen Cryptosporidium parvum exports proteins into the cytosol of the infected host cell
- Author
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Jennifer E Dumaine, Adam Sateriale, Alexis R Gibson, Amita G Reddy, Jodi A Gullicksrud, Emma N Hunter, Joseph T Clark, and Boris Striepen
- Subjects
Cryptosporidium parvum ,Microbiology and Infectious Disease ,General Immunology and Microbiology ,QH301-705.5 ,General Neuroscience ,Science ,Protozoan Proteins ,Cryptosporidiosis ,Cryptosporidium ,General Medicine ,protein export ,General Biochemistry, Genetics and Molecular Biology ,Host-Parasite Interactions ,Mice ,Cytosol ,effector ,parasitic diseases ,Animals ,host-pathogen interactions ,Medicine ,Other ,Biology (General) ,Research Article - Abstract
The parasite Cryptosporidium is responsible for diarrheal disease in young children causing death, malnutrition, and growth delay. Cryptosporidium invades enterocytes where it develops in a unique intracellular niche. Infected cells exhibit profound changes in morphology, physiology, and transcriptional activity. How the parasite effects these changes is poorly understood. We explored the localization of highly polymorphic proteins and found members of the Cryptosporidium parvum MEDLE protein family to be translocated into the cytosol of infected cells. All intracellular life stages engage in this export, which occurs after completion of invasion. Mutational studies defined an N-terminal host-targeting motif and demonstrated proteolytic processing at a specific leucine residue. Direct expression of MEDLE2 in mammalian cells triggered an ER stress response, which was also observed during infection. Taken together, our studies reveal the presence of a Cryptosporidium secretion system capable of delivering parasite proteins into the infected enterocyte.
- Published
- 2021
47. Characterising the sedimentation of bidisperse colloidal silica using analytical centrifugation
- Author
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Hangyu Chen, Xiaodong Jia, Michael Fairweather, and Timothy N. Hunter
- Subjects
Mechanics of Materials ,General Chemical Engineering - Published
- 2023
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48. Approximation of hindered zonal settling rates for flocculated inorganic/organic composite suspensions in inertial flow conditions
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Alexander P.G. Lockwood, Jacob R.L. Rumney, Martyn G. Barnes, Jonathan M. Dodds, Jeffrey Peakall, and Timothy N. Hunter
- Subjects
Process Chemistry and Technology ,Safety, Risk, Reliability and Quality ,Waste Management and Disposal ,Biotechnology - Published
- 2023
- Full Text
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49. The Impact of Water on Choline‐2‐Octenoic Ionic Liquid‐Facilitated Transdermal Transport (Adv. Therap. 1/2023)
- Author
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Isabel R. Nichols, Christine M. Hamadani, Claylee M. Chism, Alysha N. Hunter, Humayun Ahmad, Kendall Wontor, Ashley E. Williams, Priyavrat Vashisth, Nathan I. Hammer, Santanu Kundu, and Eden E. L. Tanner
- Subjects
Pharmacology ,Biochemistry (medical) ,Pharmaceutical Science ,Medicine (miscellaneous) ,Pharmacology (medical) ,Genetics (clinical) - Published
- 2023
- Full Text
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50. ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins.
- Author
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Pål Puntervoll, Rune Linding, Christine Gemünd, Sophie Chabanis-Davidson, Morten Mattingsdal, Scott Cameron, David M. A. Martin, Gabriele Ausiello, Barbara Brannetti, Anna Costantini, Fabrizio Ferrè, Vincenza Maselli, Allegra Via, Gianni Cesareni, Francesca Diella, Giulio Superti-Furga, Lucjan Stanislaw Wyrwicz, Chenna Ramu, Caroline McGuigan, Rambabu Gudavalli, Ivica Letunic, Peer Bork, Leszek Rychlewski, Bernhard Küster, Manuela Helmer-Citterich, William N. Hunter, Rein Aasland, and Toby J. Gibson
- Published
- 2003
- Full Text
- View/download PDF
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