625 results on '"N. Bartlett"'
Search Results
2. Cross-sectional and longitudinal genotype to phenotype surveillance of SARS-CoV-2 variants over the first four years of the COVID-19 pandemicResearch in context
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Anouschka Akerman, Christina Fichter, Vanessa Milogiannakis, Camille Esneau, Mariana Ruiz Silva, Tim Ison, Joseph A. Lopez, Zin Naing, Joanna Caguicla, Supavadee Amatayakul-Chantler, Nathan Roth, Sandro Manni, Thomas Hauser, Thomas Barnes, Tino Boss, Anna Condylios, Malinna Yeang, Kenta Sato, Nathan N. Bartlett, David Darley, Gail Matthews, Damien J. Stark, Susan Promsri, William D. Rawlinson, Benjamin Murrell, Anthony D. Kelleher, Dominic Dwyer, Vitali Sintchenko, Jen Kok, Sally Ellis, Kelsi Marris, Elizabeth Knight, Veronic C. Hoad, David O. Irving, Iain Gosbell, Fabienne Brilot, James Wood, Anupriya Aggarwal, and Stuart G. Turville
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SARS-CoV-2 ,Molecular epidemiology ,ACE2 ,TMPRSS2 ,Collectrin-like domain ,Neutralisation ,Medicine ,Medicine (General) ,R5-920 - Abstract
Summary: Background: Continued phenotyping and ongoing molecular epidemiology are important in current and future monitoring of emerging SARS-CoV-2 lineages. Herein we developed pragmatic strategies to track the emergence, spread and phenotype of SARS-CoV-2 variants in Australia in an era of decreasing diagnostic PCR testing and focused cohort-based studies. This was aligned to longitudinal studies that span 4 years of the COVID-19 pandemic. Methods: Throughout 2023, we partnered with diagnostic pathology providers and pathogen genomics teams to identify relevant emerging or circulating variants in the New South Wales (NSW) community. We monitored emerging variants through viral culture, growth algorithms, neutralisation responses and changing entry requirements defined by ACE2 and TMPRSS2 receptor use. To frame this in the context of the pandemic stage, we continued to longitudinally track neutralisation responses at the population level using pooled Intravenous Immunoglobulins (IVIG) derived from in excess of 700,000 donations. Findings: In antibodies derived from recent individual donations and thousands of donations pooled in IVIGs, we observed continued neutralisation across prior and emerging variants with EG.5.1, HV.1, XCT and JN.1 ranked as the most evasive SARS-CoV-2 variants. Changes in the type I antibody site at Spike positions 452, 455 and 456 were associated with lowered neutralisation responses in XBB lineages. In longitudinal tracking of population immunity spanning three years, we observed continued maturation of neutralisation breadth to all SARS-CoV-2 variants over time. Whilst neutralisation responses initially displayed high levels of imprinting towards Ancestral and early pre-Omicron lineages, this was slowly countered by increased cross reactive breadth to all variants. We predicted JN.1 to have a marked transmission advantage in late 2023 and this eventuated globally at the start of 2024. We could not attribute this advantage to neutralisation resistance but rather propose that this growth advantage arises from the preferential utilisation of ACE2 pools that cannot engage TMPRSS2 at its Collectrin-Like Domain (CLD). Interpretation: The emergence of many SARS-CoV-2 lineages documented at the end of 2023 was found to be initially associated with lowered neutralisation responses. This continued to be countered by the gradual maturation of cross-reactive neutralisation responses over time. The later appearance and dominance of the divergent JN.1 lineage cannot be attributed to a lack of neutralisation responses alone, and our data supports that its dominance is a culmination of both lowered neutralisation and changes in ACE2/TMPRSS2 entry preferences. Funding: This work was primarily supported by Australian Medical Foundation research grants MRF2005760 (ST, GM & WDR), MRF2001684 (ADK and ST) and Medical Research Future Fund Antiviral Development Call grant (WDR), Medical Research Future Fund COVID-19 grant (MRFF2001684, ADK & SGT) and the New South Wales Health COVID-19 Research Grants Round 2 (SGT).
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- 2024
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3. Subacute necrotizing fasciitis of the posterior neck disguised as a herpes zoster infection: A case report
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Samantha-Jo Wright, Anwar Khedr, Brian N Bartlett, Abbas B Jama, Hisham Mushtaq, Abdul Wahab, and Syed Anjum Khan
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Medicine (General) ,R5-920 - Abstract
Necrotizing fasciitis is a rare soft tissue infection characterized by a rapidly spreading infection of the subcutaneous tissue. Early diagnosis is important as it requires immediate and complete debridement of infected tissues and antibiotic therapy. Necrotizing fasciitis usually involves the extremities, abdomen, and groin, but rarely involves the head and neck. Necrotizing fasciitis has an aggressive course; however, in rare cases, it can present in a subacute indolent form which can be misdiagnosed as other cutaneous diseases. Our case is a unique presentation of subacute necrotizing fasciitis of the posterior neck, which was initially diagnosed as a herpes zoster infection, in a patient with undiagnosed diabetes mellitus, which was complicated with diabetic ketoacidosis and sepsis.
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- 2022
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4. Complete Electrolytic Plastron Recovery in a Low Drag Superhydrophobic Surface
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Ben P. Lloyd, Philip N. Bartlett, and Robert J. K. Wood
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Chemistry ,QD1-999 - Published
- 2021
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5. Thermoelectric Properties of Bismuth Telluride Thin Films Electrodeposited from a Nonaqueous Solution
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Katarina Cicvarić, Lingcong Meng, Daniel W. Newbrook, Ruomeng Huang, Sheng Ye, Wenjian Zhang, Andrew L. Hector, Gillian Reid, Philip N. Bartlett, and C. H. Kees de Groot
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Chemistry ,QD1-999 - Published
- 2020
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6. Direct Detection and Discrimination of Nucleotide Polymorphisms Using Anthraquinone Labeled DNA Probes
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Sarah A. Goodchild, Rachel Gao, Daniel P. Shenton, Alastair J. S. McIntosh, Tom Brown, and Philip N. Bartlett
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DNA hybridization ,redox reporter ,anthraquinone ,nucleotide polymorphisms ,diagnostics ,environmental surveillance ,Chemistry ,QD1-999 - Abstract
A novel electrochemical detection approach using DNA probes labeled with Anthraquinone (AQ) as a reporter moiety has been successfully exploited as a method for the direct detection of DNA targets. This assay uses simple voltammetry techniques (Differential Pulse Voltammetry) to exploit the unique responsiveness of AQ to its chemical environments within oxygenated aqueous buffers, providing a specific detection mechanism as a result of DNA hybridization. This measurement is based on a cathodic shift of the reduction potential of the AQ tag and the concurrent reduction in peak current upon DNA binding. The further utility of this approach for discrimination of closely related DNA targets is demonstrated using DNA strands specific to B. anthracis and closely related bacillus species. DNA targets were designed to the rpoB gene incorporating nucleotide polymorphisms associated with different bacillus species. This assay was used to demonstrate that the shift in reduction potential is directly related to the homology of the target DNA. The discriminatory mechanism is dependent on the presence of oxygen in the measurement buffer and is strongly linked to the position of the nucleotide polymorphisms; with homology at the terminus carrying the AQ functionalised nucleotide critical to achieving accurate discrimination. This understanding of assay design was used to demonstrate an optimized assay capable of discriminating between Yersinia pestis (the causative agent of plague) and closely related species based on the groEL gene. This method is attractive as it can not only detect DNA binding, but can also discriminate between multiple Single Nucleotide Polymorphisms (SNPs) within that DNA without the need for any additional reagents, reporters, or processes such as melting of DNA strands. This indicates that this approach may have great potential to be exploited within novel biosensors for detection and diagnosis of infectious disease in future Point of Care (PoC) devices.
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- 2020
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7. Advances in Electrochemical Sciences and Engineering: From Discovery to Product
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Richard C. Alkire, Philip N. Bartlett, Marc Koper, Richard C. Alkire, Philip N. Bartlett, Marc Koper
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- 2018
8. Nanopatterned and Nanoparticle-Modified Electrodes
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Richard C. Alkire, Philip N. Bartlett, Jacek Lipkowski, Richard C. Alkire, Philip N. Bartlett, Jacek Lipkowski
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- 2017
9. On the Effect of Hot Rolling on Inclusion Size and Distribution in a Cast AISI 1070 Steel Railroad Wheel
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Jacob M. Summers, Soumava Chakraborty, Laura N. Bartlett, Ronald J. O’Malley, Mario F. Buchely, and Richard Pilon
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Mechanics of Materials ,Materials Chemistry ,Metals and Alloys ,Industrial and Manufacturing Engineering - Abstract
The goal of this work is to examine the effect of hot deformation on shrinkage porosity and nonmetallic inclusions in an AISI 1070 grade steel industrially produced wheel casting. Steel cleanliness is an important consideration as it influences the mechanical properties of the final product. A high density of porosity and inclusions have been shown to be detrimental for mechanical properties, especially during hot rolling. Using a laboratory-scale rolling mill, cast preforms were subjected to a 66% cumulative reduction to determine the effect of thermomechanical processing on void closure and inclusions that may produce anisotropy in mechanical properties. Quantitative automated feature analysis, AFA, of inclusion type, size, morphology, and distribution was conducted utilizing an Aspex PICA 1020 scanning electron microscope to determine differences in inclusions and shrinkage porosity in the as-cast and as-rolled conditions. The results were compared with previously reported impact toughness values which indicated a trend with MnS projected length and average impact toughness in the T-L orientation. Reduction in shrinkage porosity was also verified utilizing 3D micro-X-ray CT scans. The AFA results showed a decrease in shrinkage porosity from 177 ppm in the as-cast condition to less than 35 ppm after rolling. Pores were in general much smaller and widely distributed after hot rolling and this would suggest improved impact properties. Analysis of nonmetallic inclusions revealed three primary categories of inclusions that included MnS, Al2O3, and complex inclusions that mainly consisted of MnS with an Al2O3 core, with small quantities of mixed silicates of Mn and Al and calcium aluminates (CaAl2O4).
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- 2022
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10. Wyndham John Albery. 5 April 1936—3 December 2013
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Michael L. Hitchman and Philip N. Bartlett
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General Medicine - Abstract
John Albery was one of the most creative, innovative and distinguished physical chemists of his time. He was particularly noted for his pioneering work in electrochemistry and electroanalytical chemistry, proton transfer kinetics and isotope effects, and enzyme kinetics. His DPhil studies on rotating disc electrodes led to seminal papers in the 1960s on ring-disc electrodes, which laid the basis for the extensive development of a powerful tool for electrochemical diagnostics. Those doctoral studies also involved work on the mechanisms of proton transfer reactions, a subject that remained very dear to his heart, and later resulted in the application of Marcus theory to provide understanding of physical organic reactions. In a separate strand on kinetic processes, he developed the theory of enzyme catalysis, which gave important insights into reaction kinetics of biological catalysts. He was a marvellous teacher and an inspiration to generations of his students, both undergraduate and post-graduate. His legacy reached far and wide, with a scientific family that included more than a dozen professorial ‘offspring’. His talents were not only restricted to science but extended to the theatre and entertainment, with writing for the satirical programme That was the week that was , the production of two musicals and of numerous departmental and college cabarets and irreverent annual revues. John Albery had an irrepressible joie de vivre and was the instigator of and participant in many occasions that were full of fun and laughter and live on in the memory. But it was not all fun and games; he had a keen sense of social justice. He led the assault to admit women to the previously men-only colleges of Oxford, and in the 1970s he mounted a vigorous and successful campaign to secure permission for the great Jewish electrochemist Benjamin Levich to leave the Soviet Union.
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- 2022
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11. SERS using nanostar‐in‐cavity structures
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Maria Sole Zalaffi, Paolo Ugo, Almudena Marti, Bethany M. Bowden, Andrea E. Russell, and Philip N. Bartlett
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cochineal lake ,nanostar ,Settore CHIM/01 - Chimica Analitica ,General Materials Science ,particle-in-cavity ,sphere-segment-void ,surface-enhanced Raman spectroscopy ,Spectroscopy - Published
- 2022
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12. Electrochemical Engineering Across Scales: From Molecules to Processes
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Richard C. Alkire, Philip N. Bartlett, Jacek Lipkowski, Richard C. Alkire, Philip N. Bartlett, Jacek Lipkowski
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- 2015
13. Electrochemistry of Carbon Electrodes
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Richard C. Alkire, Philip N. Bartlett, Jacek Lipkowski, Richard C. Alkire, Philip N. Bartlett, Jacek Lipkowski
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- 2015
14. AC-assisted deposition of aggregate free silica films with vertical pore structure
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Gilles E. Moehl, Tauqir Nasir, Yisong Han, Yasir J. Noori, Ruomeng Huang, Richard Beanland, Philip N. Bartlett, and Andrew L. Hector
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QD ,General Materials Science - Abstract
Silica thin films with vertical nanopores are useful to control access to electrode surfaces and may act as templates for growth of nanomaterials. The most effective method to produce these films, electrochemically assisted surfactant assembly, also produces aggregates of silica particles. This paper shows that growth with an AC signal superimposed onto the potential avoids the aggregates and only very small numbers of single particles are found. This finding is linked to better control of the diffusion field of hydroxide ions that are responsible for particle growth. The resultant films are smooth, with very well-ordered hexagonal pore structures.\ud \ud
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- 2022
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15. Bacterial metabolites of dietary fibre fermentation, propionate and butyrate, reduce type 2 cytokine responses by peripheral blood mononuclear cells from subjects with asthma
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L. Williams, B. Berthon, N. Bartlett, P. Wark, and L. Wood
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Nutrition and Dietetics ,Medicine (miscellaneous) - Published
- 2023
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16. Bottom-Up Designed Porous Coaxial Twin-Electrodes for Efficient Redox Cycling
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Tatjana Šafarik, Aleksandar Karajić, Stéphane Reculusa, Philip N. Bartlett, Nicolas Mano, Alexander Kuhn, Institut Polytechnique de Bordeaux (Bordeaux INP), University of Cincinnati (UC), University of Southampton, Centre de Recherche Paul Pascal (CRPP), Université de Bordeaux (UB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), and European Project: 813006,IMPLANTSENS
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Biomaterials ,signal amplification ,macroporous electrodes coaxial electrodes redox cycling signal amplification ,[CHIM.ANAL]Chemical Sciences/Analytical chemistry ,macroporous electrodes ,Electrochemistry ,[CHIM.MATE]Chemical Sciences/Material chemistry ,redox cycling ,coaxial electrodes ,Condensed Matter Physics ,Electronic, Optical and Magnetic Materials - Abstract
Redox cycling (RC) is a powerful tool capable of amplifying faradaic currents in electroanalytical measurements, thus allowing an enhancement of sensitivity through fast multiple sequential oxidation and reduction reactions of a redox-active analyte. Present state-of-the-art RC devices are mostly based on planar electrode geometries either in 2D or 3D configurations, requiring cleanroom facilities and expensive microfabrication techniques. Here, the electrochemical elaboration and characterization of a 3D coaxial macroporous twin-electrode is reported, obtained by following a low-cost bottom-up approach. A nanoengineered highly organized porous material is the basis for the design of two threaded cylindrical porous gold microelectrodes with a gap in the micrometer range that can be fine-tuned. The potentials of the outer and inner electrodes are biased at values above and below the redox potential of the analyte so that a given molecule can participate several times in the electron exchange reaction by shuttling between both electrodes. The resulting signal amplification, combined with a straightforward synthesis strategy of the electrode architecture, allows envisioning numerous (bio)electroanalytical applications.
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- 2022
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17. 3D-structured mesoporous silica memristors for neuromorphic switching and reservoir computing
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Ayoub H. Jaafar, Li Shao, Peng Dai, Tongjun Zhang, Yisong Han, Richard Beanland, Neil T. Kemp, Philip N. Bartlett, Andrew L. Hector, and Ruomeng Huang
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General Materials Science - Abstract
Memristors are emerging as promising candidates for practical application in reservoir computing systems that are capable of temporal information processing. Here, we experimentally implement a physical reservoir computing system using resistive memristors based on three-dimensional (3D)-structured mesoporous silica (mSiO2) thin films fabricated by a low cost, fast and vacuum-free sol–gel technique. The in situ learning capability and a classification accuracy of 100% on a standard machine learning dataset are experimentally demonstrated. The volatile (temporal) resistive switching in diffusive memristors arises from the formation and subsequent spontaneous rupture of conductive filaments via diffusion of Ag species within the 3D-structured nanopores of the mSiO2 thin film. Besides volatile switching, the devices also exhibit a bipolar non-volatile resistive switching behavior when the devices are operated at a higher compliance current level. The implementation of mSiO2 thin films opens the route to fabricate a simple and low cost dynamic memristor with a temporal information process functionality, which is essential for neuromorphic computing applications.
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- 2022
18. Mesoporous silica films as hard templates for electrodeposition of nanostructured gold
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Tauqir Nasir, Li Shao, Yisong Han, Richard Beanland, Philip N. Bartlett, and Andrew L. Hector
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General Engineering ,General Materials Science ,Bioengineering ,General Chemistry ,Atomic and Molecular Physics, and Optics - Abstract
Metallic nanostructures have widespread applications in fields including materials science, electronics and catalysis. Mesoporous silica films synthesised by evaporation induced self-assembly and electrochemically assisted self-assembly with pores below 10 nm were used as hard templates for the electrodeposition of Au nanostructures. Electrodeposition conditions were optimised based on pore orientation and size. The growth of nanostructures was initiated at the electrode surface as confirmed by microscopy. The hard templates and Au electrodeposits were characterised electrochemically as well as with X-ray diffraction, small angle scattering and transmission electron microscopy. Finally, mesoporous silica hard templates were removed by hydrofluoric acid etching and stable Au nanoparticles on different electrode surfaces were achieved.
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- 2022
19. Human Gaze Control in RealWorld Search.
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Daniel A. Gajewski, Aaron M. Pearson, Michael L. Mack, Francis N. Bartlett III, and John M. Henderson
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- 2004
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20. Flexible Memristor Devices Using Hybrid Polymer/Electrodeposited GeSbTe Nanoscale Thin Films
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Ayoub H. Jaafar, Lingcong Meng, Tongjun Zhang, Dongkai Guo, Daniel Newbrook, Wenjian Zhang, Gillian Reid, C. H. de Groot, Philip N. Bartlett, and Ruomeng Huang
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General Materials Science - Abstract
We report on the development of hybrid organic−inorganic material-based flexible memristor devices made by a fast and simple electrochemical fabrication method. The devices consist of a bilayer of poly(methyl methacrylate) (PMMA) and Te-rich GeSbTe chalcogenide nanoscale thin films sandwiched between Ag top and TiN bottom electrodes on both Si and flexible polyimide substrates. These hybrid memristors require no electroforming process and exhibit reliable and reproducible bipolar resistive switching at low switching voltages under bothflat and bending conditions. Multistate switching behavior can also be achieved by controlling the compliance current (CC). We attribute the switching between the high resistance state (HRS) and low resistance state (LRS) in the devices to the formation and rupture of conductive Ag filaments within the hybrid PMMA/GeSbTe matrix. This work provides a promising route to fabricate flexible memory devices through an electrodeposition process for application in flexible electronics.
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- 2022
21. Intensive care unit adaptations in the COVID-19 pandemic: Lessons learned
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Anwar Khedr, David Rokser, Jeanine Borge, Hannah Rushing, Greta Zoesch, Wade Johnson, Han-Yin Wang, April Lanz, Brian N Bartlett, Jessica Poehler, Salim Surani, and Syed A Khan
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Automotive Engineering - Abstract
The coronavirus disease 2019 pandemic had deleterious effects on the healthcare systems around the world. To increase intensive care units (ICUs) bed capacities, multiple adaptations had to be made to increase surge capacity. In this editorial, we demonstrate the changes made by an ICU of a midwest community hospital in the United States. These changes included moving patients that used to be managed in the ICU to progressive care units, such as patients requiring non-invasive ventilation and high flow nasal cannula, ST-elevation myocardial infarction patients, and post-neurosurgery patients. Additionally, newer tactics were applied to the processes of assessing oxygen supply and demand, patient care rounds, and post-ICU monitoring.
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- 2022
22. Complete Electrolytic Plastron Recovery in a Low Drag Superhydrophobic Surface
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Robert J.K. Wood, Ben P. Lloyd, and Philip N. Bartlett
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Work (thermodynamics) ,Materials science ,General Chemical Engineering ,General Chemistry ,Curvature ,Slip (ceramics) ,Capacitance ,Article ,Chemistry ,chemistry.chemical_compound ,Silicone ,chemistry ,Drag ,visual_art ,visual_art.visual_art_medium ,Wetting ,Composite material ,QD1-999 ,Layer (electronics) - Abstract
We present a superhydrophobic surface capable of recovering the lubricious gas layer known as the "plastron"from a fully wetted state underwater. It is shown that full plastron recovery is possible without a second layer of structural hierarchy, which is prone to irreversible wetting transitions. This allows us to use a cheap, fast, and potentially scalable method to fabricate the surface from silicone and carbon black in a molding process. We demonstrate plastron recovery from the fully wetted state and immediate plastron recovery after pressure-induced wetting transitions. The wetting state can be measured remotely and quickly by measuring the capacitance. The slip length is measured as a 135 μm, agreeing well with the theory given the geometry of the surface. The ability of the surface to conform to small radii of curvature and withstand damage from loading is also demonstrated. The work presented here could allow superhydrophobic surfaces to reduce drag on ships and in pipes where the plastron would otherwise rapidly dissolve.
- Published
- 2021
23. Using GISAXS to Detect Correlations between the Locations of Gold Particles Electrodeposited from an Aqueous Solution
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Gilles E. Moehl, Philip N. Bartlett, and Andrew L. Hector
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Aqueous solution ,Fabrication ,Materials science ,Nanotechnology ,02 engineering and technology ,Surfaces and Interfaces ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,0104 chemical sciences ,Gold particles ,Electrochemistry ,Grazing-incidence small-angle scattering ,General Materials Science ,0210 nano-technology ,Deposition process ,Spectroscopy - Abstract
Electrodeposition is a powerful tool for the bottom-up fabrication of novel electronic devices. This necessitates a complete understanding of the deposition process beyond the classical description using current transients. Recent calculations predict deviations within the spatial arrangement of electrodeposited particles, away from random nucleation. The spatial arrangement of Au particles generated through aqueous electrodeposition on a nontemplated substrate is investigated by grazing incidence small-angle X-ray scattering (GISAXS). We show that GISAXS is able to reveal spatial correlations within deposited particles that are not easily detectable by microscopy.
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- 2020
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24. Multisystem Inflammatory Syndrome in a Young Adult Following COVID-19 Infection: A Case Report
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Brian N Bartlett, Abraham Joseph, Anwar Khedr, Hisham Ahmed Mushtaq, Abbas B Jama, Mohamed Hassan, Nitesh K Jain, and Syed Anjum Khan
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General Engineering - Published
- 2022
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25. Journey to the Center of the Gyre: The Fate of the Tohoku Tsunami Debris Field
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Amal Bagulayan, Jinae N. Bartlett-Roa, Amanda L. Carter, Bryce G. Inman, Eric M. Keen, Eric C. Orenstein, Nastassia V. Patin, Kirk N.S. Sato, Elizabeth C. Sibert, Anne E. Simonis, Amy M. Van Cise, and Peter J.S. Franks
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Tohoku earthquake ,radioactivity in surface waters ,Tohoku debris field ,Oceanography ,GC1-1581 - Abstract
The 9.0 magnitude Tohoku earthquake that struck off the coast of Japan on March 11, 2011, was the fourth largest earthquake in recorded history and the largest ever to hit a densely populated region (Bertero, 2011; Lekkas et al., 2011). The ensuing tsunami inundated an area of about 561 km2 (Geospatial Information Authority, 2011), washing away an estimated 24.9 million tonnes of debris, including wood, sediments, plastics, industrial chemicals, and structural components (Oh, 2011). Two weeks following the tsunami, the meltdown of the Fukushima Daiichi nuclear reactors released radioactive elements into the atmosphere and coastal waters. Atmospheric deposition was found to be an important source of radioactivity in surface waters and may have contaminated the debris field, although the extent of this contamination remains unknown (Buesseler et al., 2012; Honda et al., 2012).Here, we follow the debris field along its predicted path from its source in Japanese coastal waters through the Kuroshio-Oyashio Extension, the North Pacific Current, and the California Current. From there, it will loop back toward the Hawaiian Islands, ultimately accumulating in the North Pacific Gyre (International Pacific Research Center, 2011b; Figure 1). Relying on precedents from previous natural disasters and ongoing observations, we attempt to predict the impact of this debris field on marine and coastal ecosystems in each of these regions. We predict that the Tohoku debris field will create a rare perturbation for ecosystems interconnected across the North Pacific, exacerbating the accumulating human impacts on the world ocean.
- Published
- 2012
26. Selection and characterisation of weakly coordinating solvents for semiconductor electrodeposition
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Alexander W. Black and Philip N. Bartlett
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General Physics and Astronomy ,Physical and Theoretical Chemistry - Abstract
Weakly coordinating solvents, such as dichloromethane, have been shown to be attractive for the electrodeposition of functional p-block compound and alloy semiconductors for electronic device applications. In this work the use of solvent descriptors to define weakly coordinating solvents and to identify new candidates for electrochemical applications is discussed. A set of solvent selection criteria are identified based on Kamlet and Taft's π*, α and β parameters: suitable solvents should be polar (π* ≥ 0.55), aprotic and weakly coordinating (α and β ≤ 0.2.). Five candidate solvents were identified and compared to dichloromethane: trifluorotoluene, o-dichlorobenzene, p-fluorotoluene, chlorobenzene and 1,2-dichloroethane. The solvents were compared using a suite of measurements including electrolyte voltammetric window, conductivity, and differential capacitance, and the electrochemistry of two model redox couples (decamethylferrocene and cobaltocenium hexafluorophosphate). Ion pairing is identified as a determining feature in weakly coordinating solvents and the criteria for selecting a solvent for electrochemistry is considered. o-dichlorobenzene and 1,2-dichloroethane are shown to be the most promising of the five for application to electrodeposition because of their polarity.
- Published
- 2022
27. A review of adverse effects of COVID-19 vaccines
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Hisham Ahmed, Mushtaq, Anwar, Khedr, Thoyaja, Koritala, Brian N, Bartlett, Nitesh K, Jain, and Syed Anjum, Khan
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Microbiology (medical) ,Infectious Diseases ,Letters To Editor - Abstract
The COVID-19 pandemic has led to unanticipated pressures on all aspects of human life. Multiple approaches to eliciting protective immunity must be rapidly evaluated. Numerous efforts have been made to develop an effective vaccine for this novel coronavirus, resulting in a race for vaccine development. To combat COVID-19, all nations must focus their efforts on widespread vaccination with an effective and safe vaccine. Globally, concerns about potential long-term adverse effects of vaccines have led to some apprehension about vaccine use. A vaccine's adverse effect has an integral role in the public's confidence and vaccine uptake. This article reviews the current primary literature regarding adverse effects associated with different COVID-19 vaccines in use worldwide.
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- 2022
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28. LiFePO4 battery material for the production of lithium from brines: Effect of brine composition and benefits of dilution
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Philip N. Bartlett, Samuel D. S. Fitch, S. Pérez-Rodríguez, and Nuria Garcia-Araez
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Battery (electricity) ,Materials science ,General Chemical Engineering ,Lithium iron phosphate ,chemistry.chemical_element ,Electrochemistry ,Lithium battery ,Dilution ,chemistry.chemical_compound ,General Energy ,Brine ,Chemical engineering ,chemistry ,Environmental Chemistry ,Degradation (geology) ,General Materials Science ,Lithium - Abstract
Lithium battery materials can be advantageously used for the selective sequestration of lithium ions from natural resources, which contain other cations in high excess. However, for practical applications, this new approach for lithium production requires the battery host materials to be stable over many cycles while retaining the high lithium selectivity. Here, a nearly symmetrical cell design was employed to show that LiFePO4 shows good capacity retention with cycling in artificial lithium brines representative of brines from Chile, Bolivia and Argentina. A quantitative correlation was identified between brine viscosity and capacity degradation, and for the first time it was demonstrated that the dilution of viscous brines with water significantly enhanced capacity retention and rate capability. The electrochemical and X-ray diffraction characterisation of the cycled electrodes also showed that the high lithium selectivity was preserved with cycling. Raman spectra of the cycled electrodes showed no signs of degradation of the carbon coating of LiFePO4 , while scanning electron microscopy images showed signs of particle cracking, thus pointing towards interfacial reactions as the cause of capacity degradation.
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- 2022
29. Bottom‐Up Designed Porous Coaxial Twin‐Electrodes for Efficient Redox Cycling (Adv. Funct. Mater. 7/2023)
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Tatjana Šafarik, Aleksandar Karajić, Stéphane Reculusa, Philip N. Bartlett, Nicolas Mano, and Alexander Kuhn
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Biomaterials ,Electrochemistry ,Condensed Matter Physics ,Electronic, Optical and Magnetic Materials - Published
- 2023
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30. Electrodeposited WS2 monolayers on patterned graphene
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Andrew L. Hector, Yasir J. Noori, Shibin Thomas, Yisong Han, Victoria K. Greenacre, Gillian Reid, Jiapei Zhang, C.H. de Groot, Philip N. Bartlett, Richard Beanland, Norbert Klein, Sami Ramadan, and Nema M. Abdelazim
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Materials science ,TA ,Mechanics of Materials ,Graphene ,law ,Mechanical Engineering ,Monolayer ,TN ,General Materials Science ,Nanotechnology ,General Chemistry ,Condensed Matter Physics ,law.invention - Abstract
The development of scalable techniques to make two-dimensional (2D) material heterostructures is a major obstacle that needs to be overcome before these materials can be implemented in device technologies. Electrodeposition is an industrially compatible deposition technique that offers unique advantages in scaling 2D heterostructures. In this work, we demonstrate the electrodeposition of atomic layers of WS2 over graphene electrodes using a single source precursor. Using conventional microfabrication techniques, graphene was patterned to create micro-electrodes where WS2 was site-selectively deposited to form 2D heterostructures. We used various characterization techniques, including atomic force microscopy, transmission electron microscopy, Raman spectroscopy and x-ray photoelectron spectroscopy to show that our electrodeposited WS2 layers are highly uniform and can be grown over graphene at a controllable deposition rate. This technique to selectively deposit transition metal dichalcogenides over microfabricated graphene electrodes paves the way towards wafer-scale production of 2D material heterostructures for nanodevice applications.
- Published
- 2021
31. Electrodeposition of GeSbTe-based resistive switching memory in crossbar arrays
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David Smith, Yasir J. Noori, Gillian Reid, Kees de Groot, Richard Beanland, Philip N. Bartlett, Ruomeng Huang, Ayoub H. Jaafar, Lingcong Meng, Wenjian Zhang, and Yisong Han
- Subjects
chemistry.chemical_compound ,General Energy ,Materials science ,chemistry ,business.industry ,Optoelectronics ,Physical and Theoretical Chemistry ,Resistive switching memory ,Crossbar switch ,GeSbTe ,business ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials - Abstract
In this work, we report on the fabrication of resistive random-access memory cells based on electrodeposited GeSbTe material between TiN top and bottom electrodes in a crossbar architecture. The cells exhibit asymmetric bipolar resistive switching characteristics under the same SET and RESET compliance current (CC), showing highly uniform and reproducible switching properties. A multi-state switching behavior can be also achieved by varying the sweeping voltage and CC. Unlike phase-change switching, the switching between the high-resistance state and the low-resistance state in these cells can be attributed to the formation and rupture of conductive Te bridge(s) within the Te-rich GeSbTe matrix upon application of a high electric field. The results point toward the usage of the electrodeposition method to fabricate advanced functional device structures for application in non-volatile memory.
- Published
- 2021
32. LiFePO
- Author
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Sara, Pérez-Rodríguez, Samuel D S, Fitch, Philip N, Bartlett, and Nuria, Garcia-Araez
- Abstract
Lithium battery materials can be advantageously used for the selective sequestration of lithium ions from natural resources, which contain other cations in high excess. However, for practical applications, this new approach for lithium production requires the battery host materials to be stable over many cycles while retaining the high lithium selectivity. Here, a nearly symmetrical cell design was employed to show that LiFePO
- Published
- 2021
33. Tungsten disulfide thin films via electrodeposition from a single source precursor
- Author
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William Levason, Nema M. Abdelazim, Victoria K. Greenacre, Danielle E. Smith, Gillian Reid, C. H. Kees de Groot, Andrew L. Hector, Philip N. Bartlett, Shibin Thomas, and Yasir J. Noori
- Subjects
chemistry.chemical_classification ,Materials science ,Proton ,Sulfide ,Tungsten disulfide ,Metals and Alloys ,General Chemistry ,Quartz Crystal Microbalance Techniques ,Electrolyte ,Electrochemistry ,Catalysis ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,chemistry.chemical_compound ,chemistry ,Chemical engineering ,Materials Chemistry ,Ceramics and Composites ,Thin film ,Cyclic voltammetry - Abstract
We report a simple process for the electrodeposition of tungsten disulfide thin films from a CH2Cl2-based electrolyte using a tailored single source precursor, [NEt4]2[WS2Cl4]. This new precursor incorporates the 1:2 W:S ratio required for formation of WS2, and eliminates the need for an additional proton source in the electrolyte to remove excess sulfide. The electrochemical behaviour of [NEt4]2[WS2Cl4] is studied by cyclic voltammetry and electrochemical quartz crystal microbalance techniques, and the WS2 thin films are grown by potentiostatic electrodeposition.
- Published
- 2021
34. Bioelectrochemistry: Fundamentals, Experimental Techniques and Applications
- Author
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Philip N. Bartlett
- Published
- 2008
35. Direct Electron-Transfer Anisotropy of a Site-Specifically Immobilized Cellobiose Dehydrogenase
- Author
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Chris Oostenbrink, Marta Meneghello, Roland Ludwig, Su Ma, Jani Tuoriniemi, Philip N. Bartlett, Lo Gorton, and Christophe V. F. P. Laurent
- Subjects
Flavin adenine dinucleotide ,Cellobiose dehydrogenase ,biology ,010405 organic chemistry ,Dehydrogenase ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Catalysis ,Cofactor ,0104 chemical sciences ,Crystallography ,Electron transfer ,chemistry.chemical_compound ,Protein structure ,chemistry ,biology.protein ,Cyclic voltammetry ,Surface plasmon resonance - Abstract
To study the direct electron transfer (DET) of the multicofactor enzyme cellobiose dehydrogenase (CDH) in regard to its orientation on an electrode surface, a recently published, maleimide-based immobilization method was used in combination with site-directed mutagenesis to establish different orientations on an electrode surface. CDH from Myriococcum thermophilum was chosen for this study because its protein structure is resolved and the factors influencing the movement of its mobile cytochrome domain (CYT) are established. Seven CDH variants with a surface-exposed cysteine residue in different spatial positions were generated for site-specific maleimide coupling. Surface plasmon resonance and cyclic voltammetry showed that all CDH variants, but not the wild-type CDH, bound covalently to gold electrodes or glassy carbon electrodes and were catalytically active. For DET, the CYT domain needs to move from the closed-state conformation, where it obtains an electron from the catalytic flavin adenine dinucleotide (FAD) cofactor to the open state where it can donate an electron to the electrode. We therefore hypothesized that the mobility of the CYT domain and its distance to the electrode is central for DET. We found that the uniform spatial orientations of CDH influenced DET as follows: an orientation of the two-domain enzyme on the side, with CYT in proximity to the electrode, resulted in high DET currents. Orientations with a bigger distance between CYT and the electrode, or orientations where CYT could not swing back to the dehydrogenase domain to form the closed enzyme conformation, reduced DET. In the latter case, calcium ions that stabilize the closed conformation of CDH fully recovered DET. The study demonstrates that a mobile CYT domain can compensate unfavorable orientations of the catalytic domain to a great extent and allows CDH as a multicofactor enzyme to transfer electrons even in awkward orientations. The mobile CYT domain reduces the anisotropy of DET, which is also essential for CDH's physiological function as an extracellular, electron-transferring enzyme. (Less)
- Published
- 2019
- Full Text
- View/download PDF
36. Electrodeposition of bismuth telluride from a weakly coordinating, non-aqueous solution
- Author
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Lingcong Meng, Philip N. Bartlett, C.H. de Groot, Katarina Cicvarić, and Andrew L. Hector
- Subjects
Aqueous solution ,Scanning electron microscope ,Chemistry ,Supporting electrolyte ,General Chemical Engineering ,Energy-dispersive X-ray spectroscopy ,Analytical chemistry ,chemistry.chemical_element ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Titanium nitride ,0104 chemical sciences ,Analytical Chemistry ,Bismuth ,chemistry.chemical_compound ,Electrochemistry ,Bismuth telluride ,Thin film ,0210 nano-technology - Abstract
We report the electrodeposition of bismuth telluride thin films on to titanium nitride (TiN) electrodes from a weakly coordinating solvent, dichloromethane (CH 2 Cl 2 ), using the halometallates, [N n Bu 4 ][BiCl 4 ] and [N n Bu 4 ] 2 [TeCl 6 ] with 0.1 M [N n Bu 4 ]Cl as the supporting electrolyte. The elemental composition of the electrodeposited films was found to be independent of the deposition potential between −0.6 and −2.0 V vs. Ag/AgCl but to be dependent on ratio of the concentrations of the Bi and Te precursors in the solution, with the amount of bismuth in the films increasing when the concentration of [N n Bu 4 ][BiCl 4 ] in solution was increased. All the electrodeposited films were found to be homogenous in composition across the electrode surface and to be reproducible in composition for replicate experiments. As the deposition potential was taken less negative, the morphology of the deposits changed from uniform films to films with a compact micro/nano particle structure as seen by scanning electron microscopy (SEM). Using this system, the electrodeposition of crystalline Bi 2 Te 3 and Bi 4 Te 3 was confirmed by energy dispersive spectroscopy (EDX) and grazing incidence X-ray diffraction.
- Published
- 2019
- Full Text
- View/download PDF
37. Tungsten disulfide thin films
- Author
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Shibin, Thomas, Victoria K, Greenacre, Danielle E, Smith, Yasir J, Noori, Nema M, Abdelazim, Andrew L, Hector, C H Kees, de Groot, William, Levason, Philip N, Bartlett, and Gillian, Reid
- Abstract
We report a simple process for the electrodeposition of tungsten disulfide thin films from a CH
- Published
- 2021
38. Phase change memory by GeSbTe electrodeposition in crossbar arrays
- Author
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Kees de Groot, Philip N. Bartlett, Ruomeng Huang, Kathleen LeBlanc, Yasir J. Noori, David C. Smith, Yisong Han, Nema M. Abdelazim, Mehrdad Alibouri, Ayoub H. Jaafar, Gillian Reid, Richard Beanland, Lingcong Meng, Wenjian Zhang, Nikolay Zhelev, and Gabriela P. Kissling
- Subjects
Condensed Matter - Materials Science ,Materials science ,Materials Science (cond-mat.mtrl-sci) ,FOS: Physical sciences ,Nanotechnology ,Orders of magnitude (numbers) ,GeSbTe ,Electronic, Optical and Magnetic Materials ,Characterization (materials science) ,Phase-change memory ,Non-volatile memory ,chemistry.chemical_compound ,Nanolithography ,chemistry ,Neuromorphic engineering ,Materials Chemistry ,Electrochemistry ,Crossbar switch - Abstract
Phase change memories (PCM) is an emerging type of non-volatile memory that has shown a strong presence in the data-storage market. This technology has recently attracted significant research interest in the development of non-Von Neumann computing architectures such as in-memory and neuromorphic computing. Research in these areas has been primarily motivated by the scalability potential of phase change materials and their compatibility with industrial nanofabrication processes. In this work, we are presenting our development of crossbar phase change memory arrays through the electrodeposition of GeSbTe (GST). We show that GST can be electrodeposited in microfabricated TiN crossbar arrays using a scalable process. Our phase switching test of the electrodeposited materials have shown that a SET/RESET resistance ratio of 2-3 orders of magnitude is achievable with a switching endurance of around 80 cycles. These results represent the first phase switching of electrodeposited GeSbTe in microfabricated crossbar arrays. Our work paves the way towards developing large memory arrays involving electrodeposited materials for passive selectors and phase switching devices. It also opens opportunities for developing a variety of different electronic devices using electrodeposited materials., Comment: 9 pages, 5 figures
- Published
- 2021
39. Lateral growth of MoS2 2D material semiconductors over an insulator via electrodeposition
- Author
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Yisong Han, Yasir J. Noori, Andrew L. Hector, Gillian Reid, Philip N. Bartlett, Shibin Thomas, Nikolay Zhelev, Victoria K. Greenacre, Nema M. Abdelazim, Cornelis De Groot, Giacomo Piana, Richard Beanland, and Danielle E. Smith
- Subjects
Materials science ,business.industry ,chemistry.chemical_element ,Heterojunction ,Insulator (electricity) ,Substrate (electronics) ,Electronic, Optical and Magnetic Materials ,chemistry.chemical_compound ,Semiconductor ,chemistry ,Electrode ,Optoelectronics ,business ,Tin ,Molybdenum disulfide ,Lithography - Abstract
Developing novel techniques for depositing transition metal dichalcogenides is crucial for the industrial adoption of 2D materials in optoelectronics. In this work, the lateral growth of molybdenum disulfide (MoS2) over an insulating surface is demonstrated using electrochemical deposition. By fabricating a new type of microelectrodes, MoS2 2D films grown from TiN electrodes across opposite sides are connected over an insulating substrate, hence, forming a lateral device structure through only one lithography and deposition step. Using a variety of characterization techniques, the growth rate of MoS2 is shown to be highly anisotropic with lateral to vertical growth ratios exceeding 20-fold. Electronic and photo-response measurements on the device structures demonstrate that the electrodeposited MoS2 layers behave like semiconductors, confirming their potential for photodetection applications. This lateral growth technique paves the way toward room temperature, scalable, and site-selective production of various transition metal dichalcogenides and their lateral heterostructures for 2D materials-based fabricated devices.
- Published
- 2021
40. Waveguide Enhanced Raman Spectroscopy for Biosensing: A Review
- Author
-
Michalis N. Zervas, Philip N. Bartlett, Zhen Liu, Bethany M. Bowden, James S. Wilkinson, Mohamed A. Ettabib, and Almudena Martí
- Subjects
Materials science ,Light ,Bioengineering ,Nanotechnology ,02 engineering and technology ,Spectrum Analysis, Raman ,01 natural sciences ,Waveguide (optics) ,law.invention ,symbols.namesake ,law ,Dielectric waveguides ,Instrumentation ,Laser light ,Fluid Flow and Transfer Processes ,Process Chemistry and Technology ,010401 analytical chemistry ,Surface-enhanced Raman spectroscopy ,021001 nanoscience & nanotechnology ,Laser ,0104 chemical sciences ,Nanostructures ,Refractometry ,Nanolithography ,symbols ,0210 nano-technology ,Raman spectroscopy ,Biosensor - Abstract
Waveguide enhanced Raman spectroscopy (WERS) utilizes simple, robust, high-index contrast dielectric waveguides to generate a strong evanescent field, through which laser light interacts with analytes residing on the surface of the waveguide. It offers a powerful tool for the direct identification and reproducible quantification of biochemical species and an alternative to surface enhanced Raman spectroscopy (SERS) without reliance on fragile noble metal nanostructures. The advent of low-cost laser diodes, compact spectrometers, and recent progress in material engineering, nanofabrication techniques, and software modeling tools have made realizing portable and cheap WERS Raman systems with high sensitivity a realistic possibility. This review highlights the latest progress in WERS technology and summarizes recent demonstrations and applications. Following an introduction to the fundamentals of WERS, the theoretical framework that underpins the WERS principles is presented. The main WERS design considerations are then discussed, and a review of the available approaches for the modification of waveguide surfaces for the attachment of different biorecognition elements is provided. The review concludes by discussing and contrasting the performance of recent WERS implementations, thereby providing a future roadmap of WERS technology where the key opportunities and challenges are highlighted.
- Published
- 2021
41. Diffusion in weakly coordinating solvents
- Author
-
Alexander W. Black, Wenjian Zhang, Gillian Reid, and Philip N. Bartlett
- Subjects
General Chemical Engineering ,Electrochemistry - Abstract
Weakly coordinating solvents are of interest for the electrodeposition of p-block semiconductors for application in electronic devices. p-block complexes typically have weakly coordinated ligands that are easily displaced, making them incompatible with strongly Lewis basic solvents. In this work we use electrochemical measurements at microelectrodes to study diffusion in weakly coordinating solvents. Diffusion coefficients of the metallocenes decamethylferrocene, decamethylferrocenium hexafluorophosphate, cobaltocenium hexafluorophosphate, and the electrodeposition precursors tetrachloroantimonate(III) and tetrachlorobismuthate(III) were measured. The values are analyzed using the modified Stokes-Einstein equation and compared with the theoretical upper, D max, and lower, D min, bounds of the diffusion coefficients. This approach allows the interpretation of D values, whilst avoiding dealing with some of the uncertainties associated with molecular size in the Stokes-Einstein equation. The neutral decamethylferrocene was found to obey the Stokes-Einstein equation whereas the charged metallocene species had values which were less than the theoretical minimum, which was attributed to a larger than expected particle size caused by ion pairing. The importance of considering the modifications of the Stokes-Einstein equation is also highlighted.
- Published
- 2022
- Full Text
- View/download PDF
42. HIDRA-MAT liquid metal droplet injector for liquid metal applications in HIDRA
- Author
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A. Shone, Z. Koyn, B. Kamiyama, E. Perez, L. Barrus, N. Bartlett, J.P. Allain, and D. Andruczyk
- Subjects
Nuclear Energy and Engineering ,Mechanical Engineering ,General Materials Science ,Civil and Structural Engineering - Published
- 2022
- Full Text
- View/download PDF
43. Self-powered wireless carbohydrate/oxygen sensitive biodevice based on radio signal transmission.
- Author
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Magnus Falk, Miguel Alcalde, Philip N Bartlett, Antonio L De Lacey, Lo Gorton, Cristina Gutierrez-Sanchez, Raoudha Haddad, Jeremy Kilburn, Dónal Leech, Roland Ludwig, Edmond Magner, Diana M Mate, Peter Ó Conghaile, Roberto Ortiz, Marcos Pita, Sascha Pöller, Tautgirdas Ruzgas, Urszula Salaj-Kosla, Wolfgang Schuhmann, Fredrik Sebelius, Minling Shao, Leonard Stoica, Cristoph Sygmund, Jonas Tilly, Miguel D Toscano, Jeevanthi Vivekananthan, Emma Wright, and Sergey Shleev
- Subjects
Medicine ,Science - Abstract
Here for the first time, we detail self-contained (wireless and self-powered) biodevices with wireless signal transmission. Specifically, we demonstrate the operation of self-sustained carbohydrate and oxygen sensitive biodevices, consisting of a wireless electronic unit, radio transmitter and separate sensing bioelectrodes, supplied with electrical energy from a combined multi-enzyme fuel cell generating sufficient current at required voltage to power the electronics. A carbohydrate/oxygen enzymatic fuel cell was assembled by comparing the performance of a range of different bioelectrodes followed by selection of the most suitable, stable combination. Carbohydrates (viz. lactose for the demonstration) and oxygen were also chosen as bioanalytes, being important biomarkers, to demonstrate the operation of the self-contained biosensing device, employing enzyme-modified bioelectrodes to enable the actual sensing. A wireless electronic unit, consisting of a micropotentiostat, an energy harvesting module (voltage amplifier together with a capacitor), and a radio microchip, were designed to enable the biofuel cell to be used as a power supply for managing the sensing devices and for wireless data transmission. The electronic system used required current and voltages greater than 44 µA and 0.57 V, respectively to operate; which the biofuel cell was capable of providing, when placed in a carbohydrate and oxygen containing buffer. In addition, a USB based receiver and computer software were employed for proof-of concept tests of the developed biodevices. Operation of bench-top prototypes was demonstrated in buffers containing different concentrations of the analytes, showcasing that the variation in response of both carbohydrate and oxygen biosensors could be monitored wirelessly in real-time as analyte concentrations in buffers were changed, using only an enzymatic fuel cell as a power supply.
- Published
- 2014
- Full Text
- View/download PDF
44. The Geogenomic Mutational Atlas of Pathogens (GoMAP) web system.
- Author
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David P Sargeant, Michael W Hedden, Sandeep Deverasetty, Christy L Strong, Izua J Alaniz, Alexandria N Bartlett, Nicholas R Brandon, Steven B Brooks, Frederick A Brown, Flaviona Bufi, Monika Chakarova, Roxanne P David, Karlyn M Dobritch, Horacio P Guerra, Kelvy S Levit, Kiran R Mathew, Ray Matti, Dorothea Q Maza, Sabyasachy Mistry, Nemanja Novakovic, Austin Pomerantz, Timothy F Rafalski, Viraj Rathnayake, Noura Rezapour, Christian A Ross, Steve G Schooler, Sarah Songao, Sean L Tuggle, Helen J Wing, Sandy Yousif, and Martin R Schiller
- Subjects
Medicine ,Science - Abstract
We present a new approach for pathogen surveillance we call Geogenomics. Geogenomics examines the geographic distribution of the genomes of pathogens, with a particular emphasis on those mutations that give rise to drug resistance. We engineered a new web system called Geogenomic Mutational Atlas of Pathogens (GoMAP) that enables investigation of the global distribution of individual drug resistance mutations. As a test case we examined mutations associated with HIV resistance to FDA-approved antiretroviral drugs. GoMAP-HIV makes use of existing public drug resistance and HIV protein sequence data to examine the distribution of 872 drug resistance mutations in ∼ 502,000 sequences for many countries in the world. We also implemented a broadened classification scheme for HIV drug resistance mutations. Several patterns for geographic distributions of resistance mutations were identified by visual mining using this web tool. GoMAP-HIV is an open access web application available at http://www.bio-toolkit.com/GoMap/project/
- Published
- 2014
- Full Text
- View/download PDF
45. Large-Area Electrodeposition of Few-Layer MoS
- Author
-
Yasir J, Noori, Shibin, Thomas, Sami, Ramadan, Danielle E, Smith, Vicki K, Greenacre, Nema, Abdelazim, Yisong, Han, Richard, Beanland, Andrew L, Hector, Norbert, Klein, Gillian, Reid, Philip N, Bartlett, and C H, Kees de Groot
- Abstract
Heterostructures involving two-dimensional (2D) transition metal dichalcogenides and other materials such as graphene have a strong potential to be the fundamental building block of many electronic and optoelectronic applications. The integration and scalable fabrication of such heterostructures are of the essence in unleashing the potential of these materials in new technologies. For the first time, we demonstrate the growth of few-layer MoS
- Published
- 2020
46. Inflated scaled scores on the digital WISC-V coding subtest in a Canadian sample
- Author
-
Natalie Gayle Frost, Amanda M. O’Brien, Joseph E. Casey, and Alicia N. Bartlett
- Subjects
Analysis of Variance ,Canada ,Adolescent ,Psychometrics ,05 social sciences ,Wechsler Scales ,Wechsler Adult Intelligence Scale ,03 medical and health sciences ,0302 clinical medicine ,Neuropsychology and Physiological Psychology ,Cross-Sectional Studies ,Test score ,Statistics ,Developmental and Educational Psychology ,Humans ,0501 psychology and cognitive sciences ,Psychology ,Child ,030217 neurology & neurosurgery ,050104 developmental & child psychology ,Wechsler Intelligence Scale for Children ,Coding (social sciences) - Abstract
This study examined performance differences in the traditional paper-and-pencil and new digital versions of the Coding subtest from the Wechsler Intelligence Scale for Children-Fifth Edition (WISC-V) using a cross-sectional sample. A total of 212 school-aged children between 6 and 14 years old were included in the sample, with 116 completing the paper version and 96 completing the digital version administered on a tablet in 2017-2018. One-way ANOVA revealed a significant difference with large effect size between mean scaled scores, with the digital version resulting in higher scaled scores than the paper version
- Published
- 2020
47. Large-Area Electrodeposition of Few-Layer MoS2 on Graphene for 2D Material Heterostructures
- Author
-
Shibin Thomas, Yisong Han, Richard Beanland, Vicki K. Greenacre, Gillian Reid, Norbert Klein, Danielle E. Smith, Andrew L. Hector, Yasir J. Noori, C. H. Kees de Groot, Philip N. Bartlett, Sami Ramadan, and Nema M. Abdelazim
- Subjects
Materials science ,Fabrication ,FOS: Physical sciences ,Nanotechnology ,Applied Physics (physics.app-ph) ,02 engineering and technology ,010402 general chemistry ,7. Clean energy ,01 natural sciences ,law.invention ,chemistry.chemical_compound ,symbols.namesake ,X-ray photoelectron spectroscopy ,law ,General Materials Science ,Molybdenum disulfide ,Graphene ,Heterojunction ,Physics - Applied Physics ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,chemistry ,Transmission electron microscopy ,symbols ,0210 nano-technology ,Raman spectroscopy ,Layer (electronics) - Abstract
Heterostructures involving two-dimensional (2D) transition metal dichalcogenides and other materials such as graphene have a strong potential to be the fundamental building block of many electronic and opto-electronic applications. The integration and scalable fabrication of such heterostructures is of essence in unleashing the potential of these materials in new technologies. For the first time, we demonstrate the growth of few-layer MoS2 films on graphene via non-aqueous electrodeposition. Through methods such as scanning and transmission electron microscopy, atomic force microscopy, Raman spectroscopy, energy and wavelength dispersive X-ray spectroscopies and X-ray photoelectron spectroscopy, we show that this deposition method can produce large-area MoS2 films with high quality and uniformity over graphene. We reveal the potential of these heterostructures by measuring the photo-induced current through the film. These results pave the way towards developing the electrodeposition method for the large-scale growth of heterostructures consisting of varying 2D materials for many applications., 11 pages and 6 figures
- Published
- 2020
48. Phase-change memories (PCM) – Experiments and modelling: general discussion
- Author
-
Alexandra I. Berg, Philip N. Bartlett, Alexander L. Shluger, R. Stanley Williams, Martin Salinga, Daniele Ielmini, Michael N. Kozicki, Cina Foroutan-Nejad, Geoffrey W. Burr, Rainer Waser, Hisao Nakamura, Ilia Valov, Ella Gale, Vladimir Kolosov, Wei Wang, Gabriela P. Kissling, Konstantin Z. Rushchanskii, Damien Thompson, Ruomeng Huang, Marco Bernasconi, Simon Brown, Bartlett, P, Berg, A, Bernasconi, M, Brown, S, Burr, G, Foroutan-Nejad, C, Gale, E, Huang, R, Ielmini, D, Kissling, G, Kolosov, V, Kozicki, M, Nakamura, H, Rushchanskii, K, Salinga, M, Shluger, A, Thompson, D, Valov, I, Wang, W, Waser, R, and Williams, R
- Subjects
Materials science ,010401 analytical chemistry ,02 engineering and technology ,Mechanics ,021001 nanoscience & nanotechnology ,neuromorphic computing ,01 natural sciences ,0104 chemical sciences ,Phase change memoeri ,Phase change ,ddc:540 ,Physical and Theoretical Chemistry ,0210 nano-technology ,FIS/03 - FISICA DELLA MATERIA - Published
- 2019
- Full Text
- View/download PDF
49. Wise Feedback as a Timely Intervention for At-Risk Students Transitioning Into High School
- Author
-
Aria E. Fiat, Andrew J. Thayer, Clayton R. Cook, Jessie M. Kember, and Meghanne N. Bartlett-Chase
- Subjects
Medical education ,Social psychology (sociology) ,education ,05 social sciences ,School psychology ,Psychological intervention ,050301 education ,Mindset ,Social issues ,Education ,Intervention (counseling) ,Developmental and Educational Psychology ,0501 psychology and cognitive sciences ,Truancy ,Psychology ,0503 education ,At-risk students ,050104 developmental & child psychology - Abstract
A promising development in school-based prevention and intervention science is the use of applied social–psychological concepts to improve students’ experiences and outcomes in school. Mounting evidence from rigorous studies supports the efficacy of theoretically informed interventions grounded in social psychology, including growth mindset and values affirmation. One of particular utility for educators and school psychologists is wise feedback, which is a relational technique for providing skillful, constructive feedback. The overarching purpose of this study was to further explore the potential efficacy of wise feedback as a targeted intervention for students exhibiting social problem behaviors resulting in negative outcomes. Wise feedback was implemented using a multiple-baseline design with six students exhibiting signs of dropout (i.e., lack of trust and sense of belonging in a school) in ninth grade. Visual and statistical analysis indicated improvement in the students’ sense of belonging a...
- Published
- 2018
- Full Text
- View/download PDF
50. Characterising the volumes and chemical characteristics of dairy sheep effluent in New Zealand
- Author
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N. Bartlett, Ross M. Monaghan, L. C. Smith, and R. D. Longhurst
- Subjects
Phosphorus ,Soil Science ,chemistry.chemical_element ,04 agricultural and veterinary sciences ,Plant Science ,010501 environmental sciences ,01 natural sciences ,Milking ,Nutrient ,Animal science ,chemistry ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Environmental science ,Animal Science and Zoology ,Dry matter ,Agronomy and Crop Science ,Effluent ,0105 earth and related environmental sciences - Abstract
Dairy sheep produce an effluent stream from the milking parlour that is either applied directly to land via a sump and spray irrigator, or is stored in an effluent pond before application. In order to characterise this effluent stream, a monitoring programme was undertaken with effluent samples collected from two case study sheep milking farms over two lactation seasons (2014/2015 and 2015/2016), and a third over one lactation period (2015/2016). Typical effluent volumes generated ranged between 4 and 10 L ewe−1 day−1 for the 130–200-day lactation. The mean physical and chemical attributes of effluent samples generated by the milking parlours were: 0.54% dry matter (DM), 220 g nitrogen (N) m−3, 32 g phosphorus (P) m−3, 150 g potassium (K) m−3 and 22 g sulphur (S) m−3. The mean nutrient concentrations of dairy sheep effluent are lower than values reported for dairy goat (P & S only) and dairy cow effluents (N, P, K and S).
- Published
- 2017
- Full Text
- View/download PDF
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