17 results on '"N Rajaei"'
Search Results
2. Comparison of self-esteem, locus of control and their relationship with university students’ educational status at Shahid Sadoughi University of Medical Sciences- Yazd
- Author
-
M Mirzaei Alavijeh, N Rajaei, F Rezaei, S Hasanpoor, R Pirouzeh, and M Babaei Borzabadi
- Subjects
Educational status ,Self- esteem ,Locus of control ,Student ,Education (General) ,L7-991 ,Medicine (General) ,R5-920 - Abstract
Introduction: One of the normal personality characteristics is having self-esteem and its behavioral consequences which are attributable to external or internal causes, and are effective on the academic achievement of students. The purpose of this study was to compare self- esteem, locus of control and their relation with educational status of university students at Shahid Sadoughi University of Medical Sciences in Yazd. Method: In this cross-sectional study, 300 students of different faculties were evaluated. We used a questionnaire that includes demographic data, Rotter's locus of control standard questionnaire and Cooper- Smith's self-steem standard questionnaire. The data were collected and analyzed by the SPSS-18 software. Results: The average score of self-esteem was 31.84±8.32 (with a range of 0-50), and the mean score of locus of control was11.59±3.19 (with a range of 0-23). 15.4% of the subjects had internal locus of control and 74.9% had high level of self-esteem. There was no statistically significant relationship between self-esteem and locus of control (p=0.27). There was a statistically significant correlation between locus of control and average score (p=0.046), self-esteem and average score (p=0.02). In this study, age with locus of control, and average score with self-esteem have positive correlations and locus of control with self-esteem has a reverse correlations. Conclusion : The majority of students that had a high level of self-esteem and an external locus of control has high average score and as the majority of the students who had a high level of self-esteem were studying in the School of Health.
- Published
- 2012
3. (S)-3-(3,4-Dihydroxybenzyl) piperazine-2,5-dione (cyclo-Gly-L-DOPA or CG-Nio-CGLD) peptide loaded in Chitosan Glutamate-Coated Niosomes as anti-Colorectal cancer activity.
- Author
-
Piri-Gharaghie T, Ghourchian H, Rezaeizadeh G, Kabiri H, Rajaei N, Dhiaa AM, Ghajari G, and Bahari R
- Subjects
- Humans, Cell Line, Tumor, Glutamic Acid, Peptides, Cyclic chemistry, Peptides, Cyclic administration & dosage, Peptides, Cyclic pharmacology, Apoptosis drug effects, Survivin, Cell Survival drug effects, Chitosan chemistry, Chitosan administration & dosage, Colorectal Neoplasms drug therapy, Antineoplastic Agents pharmacology, Antineoplastic Agents administration & dosage, Antineoplastic Agents chemistry, Liposomes
- Abstract
Background: Colorectal cancer (CRC), now the second most prevalent malignant tumor worldwide, is more prevalent in young adults. In recent decades, there has been progress in creating anti-colorectal cancer medications, including cytotoxic compounds., Objectives: Novel anticancer drugs are needed to surmount existing obstacles. A recent study investigated the effectiveness of novel formulations in preventing colorectal cancer., Methods: During this study, we assessed a new kind of niosome called cyclo-Gly-L-DOPA (CG-Nio-CGLD) made from chitosan glutamate. We evaluated the anti-colorectal cancer properties of CG-Nio-CGLD utilizing CCK-8, invasion assay, MTT assay, flow cytometry, and cell cycle analysis. The transcription of genes associated with apoptosis was analyzed using quantitative real-time PCR. At the same time, the cytotoxicity of nanomaterials on both cancer and normal cell lines was assessed using MTT assays. Novel anticancer drugs are needed to surmount existing obstacles. A recent study investigated the effectiveness of newly developed formulations in preventing colorectal cancer., Results: The Nio-CGLD and CG-Nio-CGLD were spherical mean diameters of 169.12 ± 1.87 and 179.26 ± 2.17 nm, respectively. Entrapment efficiency (EE%) measurements of the Nio-CGLD and CG-Nio-CGLD were 63.12 ± 0.51 and 76.43 ± 0.34%, respectively. In the CG-Nio-CGLD group, the percentages of early, late, necrotic, and viable CL40 cells were 341.93%, 23.27%, 9.32%, and 25.48%. The transcription of the genes PP53, cas3, and cas8 was noticeably higher in the treatment group compared to the control group (P > 0.001). Additionally, the treatment group had lower BCL2 and survivin gene expression levels than the control group (P < 0.01). Additionally, CG-Nio-CGLD formulations demonstrated a biocompatible nanoscale delivery mechanism and displayed little cytotoxicity toward the CCD 841 CoN reference cell line., Conclusion: These findings indicate that chitosan-based noisome encapsulation may enhance the effectiveness of CG-Nio-CGLD formulations in fighting cancer., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
4. Prevalence of Vitamin D Receptor Genes Polymorphisms in People with Pulmonary Tuberculosis: A Systematic Review and Meta-Analysis.
- Author
-
Samimi R, Hosseinpanahi A, Zaboli R, Peymani A, Rouhi S, Ahmadi Gooraji S, and Rajaei N
- Abstract
Background: Polymorphisms in the vitamin D receptor (VDR) play an effective role in the susceptibility of pulmonary tuberculosis (TB). Given the importance of this polymorphism and its association with pulmonary TB, this study aimed to investigate the prevalence of VDR polymorphisms in people with pulmonary TB., Methods: The search process was performed from 2009 to 2023 according to PRISMA (Preferred reporting items for systematic reviews and meta-analyses). The strengthening of the reporting of observational studies in epidemiology (STROBE) checklist was used to qualify the articles. The data was entered into STATA version 14 software, then the fixed effects model and the random effects model, effect size (ES), and Q test ( P < 0.10) were used for data analysis at a confidence interval level (CI) of 95%. Two-sided statistical tests were considered with α=0.05., Results: In this research, 28 articles were analyzed. Polymorphisms showed a significant relationship with susceptibility to pulmonary TB ( P = 0.000), and significant heterogeneity ( P = 0.000) was seen between polymorphisms. FokI (95% CI: 0.39-0.46, P = 0.000, ES = 43%), ApaI (95% CI: 0.31-0.48, P = 0.000, ES = 39%) and BsmI (95% CI: 0.24-0.50, P = 0.000, ES = 37%) showed the most frequent gene polymorphisms after TaqI (95% CI: 0.34-0.77, P = 0.000, ES = 56%)., Conclusion: ApaI, BsmI, FokI, and TaqI polymorphisms were found in patients suffering from pulmonary TB. Polymorphisms related to the TaqI gene were the most frequent. Controlling and prescribing vitamin D may be needed in these patients., Competing Interests: The authors declare that they have no competing interests., (© 2024 Iran University of Medical Sciences.)
- Published
- 2024
- Full Text
- View/download PDF
5. Bioinformatic analysis of highly consumed phytochemicals as P-gp binders to overcome drug-resistance.
- Author
-
Rajaei N, Rahgouy G, Panahi N, and Razzaghi-Asl N
- Abstract
Background and Purpose: P-glycoprotein (P-gp) is an adenosine triphosphate (ATP)-dependent membrane efflux pump for protecting cells against xenobiotic compounds. Unfortunately, overexpressed P-gp in neoplastic cells prevents cell entry of numerous chemotherapeutic agents leading to multidrug resistance (MDR). MDR cells may be re-sensitized to chemotherapeutic drugs via P-gp inhibition/modulation. Side effects of synthetic P-gp inhibitors encouraged the development of natural products., Experimental Approach: Molecular docking and density functional theory (DFT) calculations were used as fast and accurate computational methods to explore a structure binding relationship of some dietary phytochemicals inside distinctive P-gp binding sites (modulatory/inhibitory). For this purpose, top-scored docked conformations were subjected to per-residue energy decomposition analysis in the B3LYP level of theory with a 6-31g (d, p) basis set by Gaussian98 package., Findings/results: Consecutive application of computational techniques revealed binding modes/affinities of nutritive phytochemicals within dominant binding sites of P-gp. Blind docking scores for best-ranked compounds were superior to verapamil and rhodamine-123. Pairwise amino acid decomposition of superior docked conformations revealed Tyr303 as an important P-gp binding residue. DFT-based induced polarization analysis revealed major electrostatic fluctuations at the atomistic level and confirmed larger effects for amino acids with energy-favored binding interactions. Conformational analysis exhibited that auraptene and 7,4',7'',4'''-tetra- O -methylamentoflavone might not necessarily interact to P-gp binding sites through minimum energy conformations., Conclusion and Implications: Although there are still many hurdles to overcome, obtained results may propose a few nutritive phytochemicals as potential P-gp binding agents. Moreover; top-scored derivatives may have the chance to exhibit tumor chemo-sensitizing effects., Competing Interests: The authors declared no conflict of interest in this study., (Copyright: © 2023 Research in Pharmaceutical Sciences.)
- Published
- 2023
- Full Text
- View/download PDF
6. Designing a novel method based on multiplex PCR for detecting various meat of birds in processed ground meat products.
- Author
-
Rajaei N and Doosti A
- Abstract
Falsified food directly influences wildlife, fair trade, religion, and the health of society. Here, we report a multiplex polymerase chain reaction to evaluate the accurate determination of seven species of bird meat in meals on a single assay platform. To amplify segments of DNA from Columba livia, Corvus moneduloides, Gallus gallus, Coturnix japonica, Phasianus colchicus, Struthio camelus, and Meleagris gallopavo meats, respectively, a total of seven sets of species-specific primers targeting the mitochondrial and cytochrome b genes were developed. Gel photographs and electrochromatography from an Experion Bioanalyzer were used to identify all PCR products. Species specificity checks discovered no cross-species amplification. The applicability of its screening to find target species in processed food was shown in commercial and model meatballs. A validation study revealed that the test is reliable, quick, affordable, repeatable, specific, and accurate down to 50,000 mitochondrial copies. It might be used for raw meats and products involving processed and severely deteriorated food samples. The customers, the food business, and law enforcement would all benefit immensely from this suggested approach., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2023 The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
7. Designing Alginate/Chitosan Nanoparticles Containing Echinacea angustifolia: A Novel Candidate for Combating Multidrug-Resistant Staphylococcus aureus.
- Author
-
Taghiloo S, Ghajari G, Zand Z, Kabiri-Samani S, Kabiri H, Rajaei N, and Piri-Gharaghie T
- Subjects
- Alginates, Staphylococcus aureus, Spectroscopy, Fourier Transform Infrared, Anti-Bacterial Agents pharmacology, Microbial Sensitivity Tests, Chitosan pharmacology, Methicillin-Resistant Staphylococcus aureus, Echinacea, Nanoparticles, Staphylococcal Infections
- Abstract
Nanoparticles (NPs) may help treat multidrug-resistant Staphylococcus aureus (MDR). This study prepared and evaluated chitosan/alginate-encapsulated Echinacea angustifolia extract against MDR strains. Evaluating synthesized NPs with SEM, DLS, and FT-IR. Congo red agar and colorimetric plate techniques examined isolate biofilm formation. NP antibacterial power was assessed using well diffusion. Real-time PCR assessed biofilm-forming genes. MTT assessed the synthesized NPs' toxicity. According to DLS measurements, spherical E. angustifolia NPs had a diameter of 335.3±1.43 nm. The PDI was 0.681, and the entrapment effectiveness (EE%) of the E. angustifolia extract reached 83.45 %. Synthesized NPs were most antimicrobial. S. aureus resistant to several treatments was 80 percent of 100 clinical samples. Biofilm production was linked to MDR in all strains. The ALG/CS-encapsulated extract had a 4 to 32-fold lower MIC than the free extract, which had no bactericidal action. They also significantly decreased the expression of genes involved in biofilm formation. E. angustifolia-encapsulated ALG/CS decreased IcaD, IcaA, and IcaC gene expression in all MDR strains (***p<0.001). Free extract, free NPs, and E. angustifolia-NPs had 57.5 %, 85.5 %, and 90.0 % cell viability at 256 μg/ml. These discoveries could assist generate stable plant extracts by releasing natural-derived substances under controlled conditions., (© 2023 Wiley-VHCA AG, Zurich, Switzerland.)
- Published
- 2023
- Full Text
- View/download PDF
8. Effects of Imipenem-containing Niosome nanoparticles against high prevalence methicillin-resistant Staphylococcus Epidermidis biofilm formed.
- Author
-
Piri-Gharaghie T, Jegargoshe-Shirin N, Saremi-Nouri S, Khademhosseini SH, Hoseinnezhad-Lazarjani E, Mousavi A, Kabiri H, Rajaei N, Riahi A, Farhadi-Biregani A, and Fatehi-Ghahfarokhi S
- Subjects
- Anti-Bacterial Agents pharmacology, Biofilms, Imipenem pharmacology, Liposomes pharmacology, Methicillin Resistance, Microbial Sensitivity Tests, Prevalence, Staphylococcus epidermidis, Methicillin-Resistant Staphylococcus aureus, Nanoparticles
- Abstract
We aim to assess the antibacterial and anti-biofilm properties of Niosome-encapsulated Imipenem. After isolating Staphylococcus epidermidis isolates and determining their microbial sensitivity, their ability to form biofilms was examined using plate microtiter assay. Various formulations of Niosome-encapsulated Imipenem were prepared using the thin-film hydration method, Minimum Biofilm Inhibitory Concentration (MBIC) and Minimum Inhibitory Concentration (MIC) were determined, and biofilm genes expression was examined. Drug formulations' toxicity effect on HDF cells were determined using MTT assay. Out of the 162 separated S. epidermidis, 106 were resistant to methicillin. 87 MRSE isolates were vancomycin-resistant, all of which could form biofilms. The F1 formulation of niosomal Imipenem with a size of 192.3 ± 5.84 and an encapsulation index of 79.36 ± 1.14 was detected, which prevented biofilm growth with a BGI index of 69% and reduced icaD, FnbA, EbpS biofilms' expression with P ≤ 0.001 in addition to reducing MBIC and MIC by 4-6 times. Interestingly, F1 formulation of niosomal Imipenem indicated cell viability over 90% at all tested concentrations. The results of the present study indicate that Niosome-encapsulated Imipenem reduces the resistance of MRSE to antibiotics in addition to increasing its anti-biofilm and antibiotic activity, and could prove useful as a new strategy for drug delivery., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
9. Safety considerations for forward falls.
- Author
-
Abdolshah S, Rajaei N, Akiyama Y, Yamada Y, and Okamoto S
- Subjects
- Adult, Arm, Biomechanical Phenomena, Floors and Floorcoverings, Hardness, Humans, Male, Young Adult, Accidental Falls, Fractures, Bone etiology, Fractures, Bone prevention & control, Models, Theoretical
- Abstract
Objective: Forward falls are among the most frequent causes of upper extremity fractures. This study investigated the safety considerations to prevent wrist injuries during bimanual forward falls., Methods: A biomechanical model was developed with two separated arms to facilitate investigation of asymmetrical contact and predict the impact force applied to each hand separately. To validate the developed model, a series of fall experiments were conducted in which one hand collided with a hard surface, while the other collided with a soft surface., Results: The results show that the impact force applied to each hand is independent of the other. Using these results and our model, the safety aspects of human forward falls were analyzed with a view to preventing injuries. Specifically, we sought to determine the safe range of surface stiffness and damping to ensure that the occurrence of forward falls does not lead to trauma., Conclusion: The results of this study can be applied in the design of compliant flooring to ensure the safety of people in environments with potential fall hazards. From a robotics viewpoint, the results are applicable in the design of compliant flooring for shared workplaces, where robots collaborate with people and collisions between humans and robots may cause falls., Competing Interests: The authors have no conflict of interest.
- Published
- 2020
10. Changes of QT Dispersion in Patients Suffering from Aluminium Phosphide Poisoning (Rice Pill).
- Author
-
Eshraghi A, Rajaei N, Mood MB, Vakili V, and Ramezani J
- Abstract
Background: Aluminium phosphide (ALP) or rice pill is a substance used in developing countries due to its low cost as pesticides. The availability of this substance has been lead to an increased rate of the use of this toxic inorganic compound for suicide. Complications are considered to be dose-related toxicity and hospitalisation time, varying from hemodynamic disorder, hypoglycemia, hyperglycemia, shock, cardiotoxicity, pulmonary and renal failures. The consumption of this substance is one of the major causes of mortality due to heart arrhythmia. QT dispersion represents a regional difference in ventricular repolarisation and electrical instability of the heart., Aim: The purpose of this study was to investigate the effect of ALP poisoning on QT dispersion., Methods: In this study, 70 patients with ALP poisoning were enrolled, and 10 patients were excluded due to the exclusion criteria. QT dispersion rate was calculated in 60 patients using the standard electrocardiography at the time of referral. The above data were compared with the control group, which included 40 subjects with normal coronary angiography, and without cardiovascular risk factors., Results: The findings presented herein indicated a significant correlation between QT dispersion and control group (P < 0.0.5). There was a significant relationship between the severity of acidosis and the patient's tablets -taking a number (P < 0.05). However, there was no relationship between QT dispersion with the severity of acidosis and mortality in patients., Conclusion: Because there is no CAD risk factor in the population, it can be concluded that increase in QT dispersion in these individuals can be due to ALP poisoning; nevertheless, this is not considered to be a factor in increasing the morbidity of these patients., (Copyright: © 2019 Ali Eshraghi, Niloofar Rajaei, Mahdi Balali Mood, Vida Vakili, Javad Ramezani.)
- Published
- 2019
- Full Text
- View/download PDF
11. Brain networks underlying conscious tactile perception of textures as revealed using the velvet hand illusion.
- Author
-
Rajaei N, Aoki N, Takahashi HK, Miyaoka T, Kochiyama T, Ohka M, Sadato N, and Kitada R
- Subjects
- Adult, Cerebellum diagnostic imaging, Cerebral Cortex diagnostic imaging, Humans, Magnetic Resonance Imaging, Nerve Net diagnostic imaging, Somatosensory Cortex diagnostic imaging, Cerebellum physiology, Cerebral Cortex physiology, Connectome methods, Illusions physiology, Nerve Net physiology, Somatosensory Cortex physiology, Touch Perception physiology
- Abstract
Humans are adept at perceiving textures through touch. Previous neuroimaging studies have identified a distributed network of brain regions involved in the tactile perception of texture. However, it remains unclear how nodes in this network contribute to the tactile awareness of texture. To examine the hypothesis that such awareness involves the interaction of the primary somatosensory cortex with higher order cortices, we conducted a functional magnetic resonance imaging (fMRI) study utilizing the velvet hand illusion, in which an illusory velvet-like surface is perceived between the hands. Healthy participants were subjected to a strong illusion, a weak illusion, and tactile perception of real velvet. The strong illusion induced greater activation in the primary somatosensory cortex (S1) than the weak illusion, and increases in such activation were positively correlated with the strength of the illusion. Furthermore, both actual and illusory perception of velvet induced common activation in S1. Psychophysiological interaction (PPI) analysis revealed that the strength of the illusion modulated the functional connectivity of S1 with each of the following regions: the parietal operculum, superior parietal lobule, precentral gyrus, insula, and cerebellum. The present results indicate that S1 is associated with the conscious tactile perception of textures, which may be achieved via interactions with higher order somatosensory areas., (© 2018 Wiley Periodicals, Inc.)
- Published
- 2018
- Full Text
- View/download PDF
12. Biochemical Characterization of Kat1: a Domesticated hAT-Transposase that Induces DNA Hairpin Formation and MAT-Switching.
- Author
-
Chiruvella KK, Rajaei N, Jonna VR, Hofer A, and Åström SU
- Subjects
- Amino Acid Motifs, Catalytic Domain, Conserved Sequence, DNA Breaks, Double-Stranded, DNA Cleavage, DNA Transposable Elements, DNA, Fungal metabolism, Evolution, Molecular, Fungal Proteins metabolism, Inverted Repeat Sequences, Kluyveromyces enzymology, Point Mutation, Protein Multimerization, Sequence Alignment, Structure-Activity Relationship, Transposases metabolism, DNA, Fungal genetics, Fungal Proteins genetics, Gene Expression Regulation, Fungal, Genes, Mating Type, Fungal, Kluyveromyces genetics, Transposases genetics
- Abstract
Kluyveromyces lactis hAT-transposase 1 (Kat1) generates hairpin-capped DNA double strand breaks leading to MAT-switching (MATa to MATα). Using purified Kat1, we demonstrate the importance of terminal inverted repeats and subterminal repeats for its endonuclease activity. Kat1 promoted joining of the transposon end into a target DNA molecule in vitro, a biochemical feature that ties Kat1 to transposases. Gas-phase Electrophoretic Mobility Macromolecule analysis revealed that Kat1 can form hexamers when complexed with DNA. Kat1 point mutants were generated in conserved positions to explore structure-function relationships. Mutants of predicted catalytic residues abolished both DNA cleavage and strand-transfer. Interestingly, W576A predicted to be impaired for hairpin formation, was active for DNA cleavage and supported wild type levels of mating-type switching. In contrast, the conserved CXXH motif was critical for hairpin formation because Kat1 C402A/H405A completely blocked hairpinning and switching, but still generated nicks in the DNA. Mutations in the BED zinc-finger domain (C130A/C133A) resulted in an unspecific nuclease activity, presumably due to nonspecific DNA interaction. Kat1 mutants that were defective for cleavage in vitro were also defective for mating-type switching. Collectively, this study reveals Kat1 sharing extensive biochemical similarities with cut and paste transposons despite being domesticated and evolutionary diverged from active transposons.
- Published
- 2016
- Full Text
- View/download PDF
13. Incidence Trend and Epidemiology of Common Cancers in the Center of Iran.
- Author
-
Rafiemanesh H, Rajaei-Behbahani N, Khani Y, Hosseini S, Pournamdar Z, Mohammadian-Hafshejani A, Soltani S, Hosseini SA, Khazaei S, and Salehiniya H
- Subjects
- Cross-Sectional Studies, Female, Humans, Incidence, Iran epidemiology, Male, Registries, Neoplasms epidemiology
- Abstract
Introduction: Cancer is a major public health problem in Iran and many other parts of the world. The cancer incidence is different in various countries and in country provinces. Geographical differences in the cancer incidence lead to be important to conduct an epidemiological study of the disease. This study aimed to investigate cancer epidemiology and trend in the province of Qom, located in center of Iran., Method: This is an analytical cross-sectional study carried out based on re-analysis cancer registry report and the disease management center of health ministry from 2004 to 2008 in the province of Qom. To describe incidence time trends, we carried out join point regression analysis using the software Join point Regression Program, Version 4.1.1.1., Results: There were 3,029 registered cases of cancer during 5 years studied. Sex ratio was 1.32 (male to female). Considering the frequency and mean standardized incidence, the most common cancer in women were breast, skin, colorectal, stomach, and esophagus, respectively while in men the most common cancers included skin, stomach, colorectal, bladder, and prostate, respectively. There was an increasing and significant trend, according to the annual percentage change (APC) equal to 8.08% (CI: 5.1-11.1) for all site cancer in women., Conclusion: The incidence trend of all cancers was increasing in this area. Hence, planning for identifying risk factors and performing programs for dealing with the disease are essential.
- Published
- 2015
- Full Text
- View/download PDF
14. Domesticated transposase Kat1 and its fossil imprints induce sexual differentiation in yeast.
- Author
-
Rajaei N, Chiruvella KK, Lin F, and Aström SU
- Subjects
- Amino Acid Sequence, Base Sequence, DNA Breaks, Double-Stranded, DNA, Intergenic genetics, Fungal Proteins chemistry, Fungal Proteins genetics, Gene Expression Regulation, Fungal, Genes, Mating Type, Fungal, Molecular Sequence Data, Nucleic Acid Conformation, Phylogeny, Transposases chemistry, Transposases genetics, Fossils, Fungal Proteins metabolism, Kluyveromyces genetics, Kluyveromyces physiology, Transposases metabolism
- Abstract
Transposable elements (TEs) have had a major influence on shaping both prokaryotic and eukaryotic genomes, largely through stochastic events following random or near-random insertions. In the mammalian immune system, the recombination activation genes1/2 (Rag1/2) recombinase has evolved from a transposase gene, demonstrating that TEs can be domesticated by the host. In this study, we uncovered a domesticated transposase, Kluyveromyces lactis hobo/Activator/Tam3 (hAT) transposase 1 (Kat1), operating at the fossil imprints of an ancient transposon, that catalyzes the differentiation of cell type. Kat1 induces mating-type switching from mating type a (MATa) to MATα in the yeast K. lactis. Kat1 activates switching by introducing two hairpin-capped DNA double-strand breaks (DSBs) in the MATa1-MATa2 intergenic region, as we demonstrate both in vivo and in vitro. The DSBs stimulate homologous recombination with the cryptic hidden MAT left alpha (HMLα) locus resulting in a switch of the cell type. The sites where Kat1 acts in the MATa locus most likely are ancient remnants of terminal inverted repeats from a long-lost TE. The KAT1 gene is annotated as a pseudogene because it contains two overlapping ORFs. We demonstrate that translation of full-length Kat1 requires a programmed -1 frameshift. The frameshift limited Kat1 activity, because restoring the zero frame causes switching to the MATα genotype. Kat1 also was transcriptionally activated by nutrient limitation via the transcription factor mating type switch 1 (Mts1). A phylogenetic analysis indicated that KAT1 was domesticated specifically in the Kluyveromyces clade of the budding yeasts. We conclude that Kat1 is a highly regulated transposase-derived endonuclease vital for sexual differentiation.
- Published
- 2014
- Full Text
- View/download PDF
15. Assessment of cytokine expression profile in acute myeloid leukemia patients before and after chemotherapy.
- Author
-
Sepehrizadeh Z, Mohammadi M, Emami A, Yazdi MT, Bozchlou SH, Khorramizadeh MR, Shapourabadi MB, Jaberi E, Rajaei N, and Setayesh N
- Abstract
Objective: One of the major goals of cancer treatment is the monitoring of chemotherapeutic protocols. Quantitative and comparative cytokine expression profiling could be reliable to be used for biomarkers in deadly and fast-growing cancers such as acute myeloid leukemia (AML). The present study aims to assess and further validate cytokines with probable effects on proliferation and maturation of blood cells in AML., Materials and Methods: Gene expression levels of IL-1β, IL-10, IL-8, TNF-α, and IFN-γ were analyzed before and after chemotherapy and after granulocyte colony-stimulating factor (G-CSF) therapy in 46 AML patients by an in-house quantitative comparative RT-PCR method., Results: Our findings indicated that although the gene expression level of TNF-α was almost constant in all 3 samples, IL-1β, IL-8, and IL-10 expression levels showed a decrease after chemotherapy and an increase after G-CSF therapy. On the other hand, the expression level of IFN-γ had a different pattern with an increase after chemotherapy and a decrease after G-CSF therapy., Conclusion: Taken together, the results of this study are in support of the idea that the analyzed cytokines could be useful biomarkers for AML treatment monitoring. However, further molecular epidemiological investigations are suggested to elaborate more cancer monitoring biomarkers.
- Published
- 2014
- Full Text
- View/download PDF
16. RAS/cyclic AMP and transcription factor Msn2 regulate mating and mating-type switching in the yeast Kluyveromyces lactis.
- Author
-
Barsoum E, Rajaei N, and Aström SU
- Subjects
- Cyclic AMP biosynthesis, Cyclic Nucleotide Phosphodiesterases, Type 2 biosynthesis, Cyclic Nucleotide Phosphodiesterases, Type 2 deficiency, Cyclic Nucleotide Phosphodiesterases, Type 2 metabolism, Cyclin-Dependent Kinase Inhibitor p16 biosynthesis, Cyclin-Dependent Kinase Inhibitor p16 metabolism, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, Fungal Proteins genetics, Gene Expression Regulation, Fungal, Kluyveromyces genetics, Kluyveromyces metabolism, Phenotype, Reproduction genetics, Stress, Physiological, ras Proteins genetics, Cyclic AMP metabolism, Fungal Proteins metabolism, Genes, Mating Type, Fungal, Kluyveromyces physiology, Transcription Factors metabolism, ras Proteins metabolism
- Abstract
In response to harsh environmental conditions, ascomycetes produce stress-resistant spores to promote survival. As sporulation requires a diploid DNA content, species with a haploid lifestyle, such as Kluyveromyces lactis, first induce mating in response to stress. In K. lactis, mating and mating-type switching are induced by the DNA-binding protein Mts1. Mts1 expression is known to be upregulated by nutrient limitation, but the mechanism is unknown. We show that a ras2 mutation results in a hyperswitching phenotype. In contrast, strains lacking the phosphodiesterase Pde2 had lower switching rates compared to that of the wild type (WT). As Ras2 promotes cyclic AMP (cAMP) production and Pde2 degrades cAMP, these data suggest that low cAMP levels induce switching. Because the MTS1 regulatory region contains several Msn2 binding sites and Msn2 is a transcription factor that is activated by low cAMP levels, we investigated if Msn2 regulates MTS1 transcription. Consistently with this idea, an msn2 mutant strain displayed lower switching rates than the WT strain. The transcription of MTS1 is highly induced in the ras2 mutant strain. In contrast, an msn2 ras2 double mutant strain displays WT levels of the MTS1 transcript, showing that Msn2 is a critical inducer of MTS1 transcription. Strains lacking Msn2 and Pde2 also exhibit mating defects that can be complemented by the ectopic expression of Mts1. Finally, we show that MTS1 is subjected to negative autoregulation, presumably adding robustness to the mating and switching responses. We suggest a model in which Ras2/cAMP/Msn2 mediates the stress-induced mating and mating-type switching responses in K. lactis.
- Published
- 2011
- Full Text
- View/download PDF
17. Enhanced differentiation of embryonic stem cells using co-cultivation with hepatocytes.
- Author
-
Moore RN, Dasgupta A, Rajaei N, Yarmush ML, Toner M, Larue L, and Moghe PV
- Subjects
- Animals, Cadherins biosynthesis, Cell Line, Cells, Cultured, Male, Mice, Rats, Cell Differentiation, Coculture Techniques methods, Embryonic Stem Cells cytology, Hepatocytes
- Abstract
We examined the effects of co-cultivated hepatocytes on the hepatospecific differentiation of murine embryonic stem (ES) cells. Utilizing an established mouse ES cell line expressing high or low levels of E-cadherin, that we have previously shown to be responsive to hepatotrophic growth factor stimulation (Dasgupta et al., 2005. Biotechnol Bioeng 92(3):257-266), we compared co-cultures of cadherin-expressing ES (CE-ES) cells with cultured rat hepatocytes, allowing for either paracrine interactions (indirect co-cultures) or both juxtacrine and paracrine interactions (direct co-cultures, random and patterned). Hepatospecific differentiation of ES cells was evaluated in terms of hepatic-like cuboidal morphology, heightened gene expression of late maturation marker, glucose-6-phosphatase in relation to early marker, alpha-fetoprotein (AFP), and the intracellular localization of albumin. Hepatocytes co-cultured with growth factor primed CE-ES cells markedly enhanced ES cell differentiation toward the hepatic lineage, an effect that was reversed through E-cadherin blockage and inhibited in control ES cells with reduced cadherin expression. Comparison of single ES cell cultures versus co-cultures show that direct contact co-cultures of hepatocytes and CE-ES cells maximally promoted ES cell commitment towards hepatodifferentiation, suggesting cooperative effects of cadherin-based juxtacrine and paracrine interactions. In contrast, E-cadherin deficient mouse ES (CD-ES) cells co-cultured with hepatocytes failed to show increased G6P expression, confirming the role of E-cadherin expression. To establish whether albumin expression in CE-ES cells was spatially regulated by co-cultured hepatocytes, we co-cultivated CE-ES cells around micropatterned, pre-differentiated rat hepatocytes. Albumin localization was enhanced "globally" within CE-ES cell colonies and was inhibited through E-cadherin antibody blockage in all but an interfacial band of ES cells. Thus, stem cell based cadherin presentation may be an effective tool to induce hepatotrophic differentiation by leveraging both distal/paracrine and contact/juxtacrine interactions with primary cells of the liver.
- Published
- 2008
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.