16 results on '"Musralina, Lyazzat"'
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2. The source of the Black Death in fourteenth-century central Eurasia
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Spyrou, Maria A., Musralina, Lyazzat, Gnecchi Ruscone, Guido A., Kocher, Arthur, Borbone, Pier-Giorgio, Khartanovich, Valeri I., Buzhilova, Alexandra, Djansugurova, Leyla, Bos, Kirsten I., Kühnert, Denise, Haak, Wolfgang, Slavin, Philip, and Krause, Johannes
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- 2022
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3. Chapter 22 - Genomic research of ancient pathogens in Central Asia
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Musralina, Lyazzat, Khussainova, Elmira, Altynova, Nazym, and Djansgurova, Leyla
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- 2024
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4. Integrative Functional Genomic Analysis in Multiplex Autism Families from Kazakhstan
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Perfilyeva, Anastassiya, primary, Bespalova, Kira, additional, Perfilyeva, Yuliya, additional, Skvortsova, Liliya, additional, Musralina, Lyazzat, additional, Zhunussova, Gulnur, additional, Khussainova, Elmira, additional, Iskakova, Ulzhan, additional, Bekmanov, Bakhytzhan, additional, and Djansugurova, Leyla, additional
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- 2022
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5. Stone Age Yersinia pestis genomes shed light on the early evolution, diversity, and ecology of plague
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Max Planck Society, Max Planck - Harvard Research Center for the Archaeoscience of the Ancient Mediterranean, European Research Council, Heidelberg Academy of Sciences and Humanities, Academy of Sciences of the Czech Republic, Ministerio de Ciencia e Innovación (España), German Research Foundation, Diputación Foral de Álava, Eusko Jaurlaritza, Ministry of Education and Science (Kazakhstan), Andrades Valtueña, Aida, Neumann, Gunnar U., Spyrou, María A., Musralina, Lyazzat, Aron, Franziska, Beisenov, Arman Z., Belinskiy, Andrej B., Bos, Kirsten, Buzhilova, Alexandra, Conrad, Matthias, Djansugurova, Leyla B., Dobeš, Miroslav, Ernée, Michal, Fernández-Eraso, Javier, Frohlich, Bruno, Furmanek, Mirosław, Hałuszko, Agata, Hansen, Svend, Harney, Éadaoin, Hiss, Alina N., Hübner, Alexander, Key, Félix M., Khussainova, Elmira, Kitov, Egor, Kitova, Alexandra O., Knipper, Corina, Kühnert, Denise, Lalueza-Fox, Carles, Littleton, Judith, Massy, Ken, Mittnik, Alissa, Mujika-Alustiza, José Antonio, Olalde, Iñigo, Papac, Luka, Penske, Sandra, Peška, Jaroslav, Pinhasi, Ron, Reich, David, Reinhold, Sabine, Stahl, Raphaela, Stäuble, Harald, Tukhbatova, Rezeda I., Vasilyev, Sergey, Veselovskaya, Elizaveta, Warinner, Christina, Stockhammer, Philipp W., Haak, Wolfgang, Krause, Johannes, Herbig, Alexander, Max Planck Society, Max Planck - Harvard Research Center for the Archaeoscience of the Ancient Mediterranean, European Research Council, Heidelberg Academy of Sciences and Humanities, Academy of Sciences of the Czech Republic, Ministerio de Ciencia e Innovación (España), German Research Foundation, Diputación Foral de Álava, Eusko Jaurlaritza, Ministry of Education and Science (Kazakhstan), Andrades Valtueña, Aida, Neumann, Gunnar U., Spyrou, María A., Musralina, Lyazzat, Aron, Franziska, Beisenov, Arman Z., Belinskiy, Andrej B., Bos, Kirsten, Buzhilova, Alexandra, Conrad, Matthias, Djansugurova, Leyla B., Dobeš, Miroslav, Ernée, Michal, Fernández-Eraso, Javier, Frohlich, Bruno, Furmanek, Mirosław, Hałuszko, Agata, Hansen, Svend, Harney, Éadaoin, Hiss, Alina N., Hübner, Alexander, Key, Félix M., Khussainova, Elmira, Kitov, Egor, Kitova, Alexandra O., Knipper, Corina, Kühnert, Denise, Lalueza-Fox, Carles, Littleton, Judith, Massy, Ken, Mittnik, Alissa, Mujika-Alustiza, José Antonio, Olalde, Iñigo, Papac, Luka, Penske, Sandra, Peška, Jaroslav, Pinhasi, Ron, Reich, David, Reinhold, Sabine, Stahl, Raphaela, Stäuble, Harald, Tukhbatova, Rezeda I., Vasilyev, Sergey, Veselovskaya, Elizaveta, Warinner, Christina, Stockhammer, Philipp W., Haak, Wolfgang, Krause, Johannes, and Herbig, Alexander
- Abstract
[Significance] The bacterium Yersinia pestis has caused numerous historically documented outbreaks of plague and research using ancient DNA could demonstrate that it already affected human populations during the Neolithic. However, the pathogen’s genetic diversity, geographic spread, and transmission dynamics during this early period of Y. pestis evolution are largely unexplored. Here, we describe a set of ancient plague genomes up to 5,000 y old from across Eurasia. Our data demonstrate that two genetically distinct forms of Y. pestis evolved in parallel and were both distributed across vast geographic distances, potentially occupying different ecological niches. Interpreted within the archeological context, our results suggest that the spread of plague during this period was linked to increased human mobility and intensification of animal husbandry., The bacterial pathogen Yersinia pestis gave rise to devastating outbreaks throughout human history, and ancient DNA evidence has shown it afflicted human populations as far back as the Neolithic. Y. pestis genomes recovered from the Eurasian Late Neolithic/Early Bronze Age (LNBA) period have uncovered key evolutionary steps that led to its emergence from a Yersinia pseudotuberculosis-like progenitor; however, the number of reconstructed LNBA genomes are too few to explore its diversity during this critical period of development. Here, we present 17 Y. pestis genomes dating to 5,000 to 2,500 y BP from a wide geographic expanse across Eurasia. This increased dataset enabled us to explore correlations between temporal, geographical, and genetic distance. Our results suggest a nonflea-adapted and potentially extinct single lineage that persisted over millennia without significant parallel diversification, accompanied by rapid dispersal across continents throughout this period, a trend not observed in other pathogens for which ancient genomes are available. A stepwise pattern of gene loss provides further clues on its early evolution and potential adaptation. We also discover the presence of the flea-adapted form of Y. pestis in Bronze Age Iberia, previously only identified in in the Caucasus and the Volga regions, suggesting a much wider geographic spread of this form of Y. pestis. Together, these data reveal the dynamic nature of plague’s formative years in terms of its early evolution and ecology.
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- 2022
6. Stone Age Yersinia pestis genomes shed light on the early evolution, diversity, and ecology of plague
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Andrades Valtueña, Aida, primary, Neumann, Gunnar U., additional, Spyrou, Maria A., additional, Musralina, Lyazzat, additional, Aron, Franziska, additional, Beisenov, Arman, additional, Belinskiy, Andrey B., additional, Bos, Kirsten I., additional, Buzhilova, Alexandra, additional, Conrad, Matthias, additional, Djansugurova, Leyla B., additional, Dobeš, Miroslav, additional, Ernée, Michal, additional, Fernández-Eraso, Javier, additional, Frohlich, Bruno, additional, Furmanek, Mirosław, additional, Hałuszko, Agata, additional, Hansen, Svend, additional, Harney, Éadaoin, additional, Hiss, Alina N., additional, Hübner, Alexander, additional, Key, Felix M., additional, Khussainova, Elmira, additional, Kitov, Egor, additional, Kitova, Alexandra O., additional, Knipper, Corina, additional, Kühnert, Denise, additional, Lalueza-Fox, Carles, additional, Littleton, Judith, additional, Massy, Ken, additional, Mittnik, Alissa, additional, Mujika-Alustiza, José Antonio, additional, Olalde, Iñigo, additional, Papac, Luka, additional, Penske, Sandra, additional, Peška, Jaroslav, additional, Pinhasi, Ron, additional, Reich, David, additional, Reinhold, Sabine, additional, Stahl, Raphaela, additional, Stäuble, Harald, additional, Tukhbatova, Rezeda I., additional, Vasilyev, Sergey, additional, Veselovskaya, Elizaveta, additional, Warinner, Christina, additional, Stockhammer, Philipp W., additional, Haak, Wolfgang, additional, Krause, Johannes, additional, and Herbig, Alexander, additional
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- 2022
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7. Tick‐borne encephalitis virus and West‐Nile fever virus as causes of serous meningitis of unknown origin in Kazakhstan
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Shin, Anna, primary, Tukhanova, Nur, additional, Ndenkeh, Jackson, additional, Shapiyeva, Zhanna, additional, Yegemberdiyeva, Ravilya, additional, Yeraliyeva, Lyazzat, additional, Nurmakhanov, Talgat, additional, Froeschl, Guenter, additional, Hoelscher, Michael, additional, Musralina, Lyazzat, additional, Toktasyn, Yerubayev, additional, Gulnara, Zhumabaeva, additional, Sansyzbayev, Yerlan, additional, Aigul, Satayeva, additional, Abdiyeva, Karlygash, additional, Turebekov, Nurkeldi, additional, Wagner, Edith, additional, Peintner, Lukas, additional, and Essbauer, Sandra, additional
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- 2022
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8. Genetic Relationship Among the Kazakh People Based on Y-STR Markers Reveals Evidence of Genetic Variation Among Tribes and Zhuz
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Khussainova, Elmira, primary, Kisselev, Ilya, additional, Iksan, Olzhas, additional, Bekmanov, Bakhytzhan, additional, Skvortsova, Liliya, additional, Garshin, Alexander, additional, Kuzovleva, Elena, additional, Zhaniyazov, Zhassulan, additional, Zhunussova, Gulnur, additional, Musralina, Lyazzat, additional, Kahbatkyzy, Nurzhibek, additional, Amirgaliyeva, Almira, additional, Begmanova, Mamura, additional, Seisenbayeva, Akerke, additional, Bespalova, Kira, additional, Perfilyeva, Anastasia, additional, Abylkassymova, Gulnar, additional, Farkhatuly, Aldiyar, additional, Good, Sara V., additional, and Djansugurova, Leyla, additional
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- 2022
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9. List of contributors
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Abecasis, Ana B., Aiewsakun, Pakorn, Altynova, Nazym, Ansari, Afzal, Baker, Kate S., Bespiatykh, Dmitry, Bhardwaj, Neha, Burkovski, Andreas, Caetano-Anollés, Gustavo, Chodvadiya, Jaimin, Cui, Yujun, Djansgurova, Leyla, Dwivedi, Purna, Elias, Rita, Gharbi, Nour, Gomes, Pedro, González-Candelas, Fernando, Hak, Fiona, Hawkey, Jane, Huete, Samuel G., Ingle, Danielle, Jia, Chenghao, Kale, Mohan M., Kasibhatla, Sunitha Manjari, Khussainova, Elmira, Kimura, Hirokazu, Kulkarni-Kale, Urmila, Lamer, Ombeline, Le Meur, Adrien, Li, Qi, Liu, Yuhao, Luo, Tao, Miles, Sydney L., Mokrousov, Igor, Musralina, Lyazzat, Nieves, Cecilia, O’Donnell, Samuel, Palittapongarnpim, Prasit, Perdigão, João, Picardeau, Mathieu, Pingarilho, Marta, Portugal, Isabel, Qian, Xiuwei, Refrégier, Guislaine, Reva, Oleg N., de la Vega, Ricardo Rodriguez, Rousseau, Emilie, Sada, Mitsuru, Sangal, Vartul, Senelle, Gaëtan, Sharma, Mukul, Shirai, Tatsuya, Shitikov, Egor, Singh, Pushpendra, Singh, Urvashi B., Sondhiya, Gayatri, The, Hao Chung, Tibayrenc, Michel, Vaidya, Sunil R., Vandamme, Anne-Mieke, Vernadet, Jean-Philippe, Veyrier, Frédéric J., Wang, Ran, Wang, Zining, Wirth, Thierry, Wu, Yarong, Yang, Ruifu, Yue, Min, Zein-Eddine, Rima, Zhou, Haiyang, and Zuo, Xiujuan
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- 2024
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10. Ten millennia of hepatitis B virus evolution
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Kocher, Arthur, primary, Papac, Luka, additional, Barquera, Rodrigo, additional, Key, Felix M., additional, Spyrou, Maria A., additional, Hübler, Ron, additional, Rohrlach, Adam B., additional, Aron, Franziska, additional, Stahl, Raphaela, additional, Wissgott, Antje, additional, van Bömmel, Florian, additional, Pfefferkorn, Maria, additional, Mittnik, Alissa, additional, Villalba-Mouco, Vanessa, additional, Neumann, Gunnar U., additional, Rivollat, Maïté, additional, van de Loosdrecht, Marieke S., additional, Majander, Kerttu, additional, Tukhbatova, Rezeda I., additional, Musralina, Lyazzat, additional, Ghalichi, Ayshin, additional, Penske, Sandra, additional, Sabin, Susanna, additional, Michel, Megan, additional, Gretzinger, Joscha, additional, Nelson, Elizabeth A., additional, Ferraz, Tiago, additional, Nägele, Kathrin, additional, Parker, Cody, additional, Keller, Marcel, additional, Guevara, Evelyn K., additional, Feldman, Michal, additional, Eisenmann, Stefanie, additional, Skourtanioti, Eirini, additional, Giffin, Karen, additional, Gnecchi-Ruscone, Guido Alberto, additional, Friederich, Susanne, additional, Schimmenti, Vittoria, additional, Khartanovich, Valery, additional, Karapetian, Marina K., additional, Chaplygin, Mikhail S., additional, Kufterin, Vladimir V., additional, Khokhlov, Aleksandr A., additional, Chizhevsky, Andrey A., additional, Stashenkov, Dmitry A., additional, Kochkina, Anna F., additional, Tejedor-Rodríguez, Cristina, additional, de Lagrán, Íñigo García-Martínez, additional, Arcusa-Magallón, Héctor, additional, Garrido-Pena, Rafael, additional, Royo-Guillén, José Ignacio, additional, Nováček, Jan, additional, Rottier, Stéphane, additional, Kacki, Sacha, additional, Saintot, Sylvie, additional, Kaverzneva, Elena, additional, Belinskiy, Andrej B., additional, Velemínský, Petr, additional, Limburský, Petr, additional, Kostka, Michal, additional, Loe, Louise, additional, Popescu, Elizabeth, additional, Clarke, Rachel, additional, Lyons, Alice, additional, Mortimer, Richard, additional, Sajantila, Antti, additional, de Armas, Yadira Chinique, additional, Hernandez Godoy, Silvia Teresita, additional, Hernández-Zaragoza, Diana I., additional, Pearson, Jessica, additional, Binder, Didier, additional, Lefranc, Philippe, additional, Kantorovich, Anatoly R., additional, Maslov, Vladimir E., additional, Lai, Luca, additional, Zoledziewska, Magdalena, additional, Beckett, Jessica F., additional, Langová, Michaela, additional, Danielisová, Alžběta, additional, Ingman, Tara, additional, Atiénzar, Gabriel García, additional, de Miguel Ibáñez, Maria Paz, additional, Romero, Alejandro, additional, Sperduti, Alessandra, additional, Beckett, Sophie, additional, Salter, Susannah J., additional, Zilivinskaya, Emma D., additional, Vasil’ev, Dmitry V., additional, von Heyking, Kristin, additional, Burger, Richard L., additional, Salazar, Lucy C., additional, Amkreutz, Luc, additional, Navruzbekov, Masnav, additional, Rosenstock, Eva, additional, Alonso-Fernández, Carmen, additional, Slavchev, Vladimir, additional, Kalmykov, Alexey A., additional, Atabiev, Biaslan Ch., additional, Batieva, Elena, additional, Calmet, Micaela Alvarez, additional, Llamas, Bastien, additional, Schultz, Michael, additional, Krauß, Raiko, additional, Jiménez-Echevarría, Javier, additional, Francken, Michael, additional, Shnaider, Svetlana, additional, de Knijff, Peter, additional, Altena, Eveline, additional, Van de Vijver, Katrien, additional, Fehren-Schmitz, Lars, additional, Tung, Tiffiny A., additional, Lösch, Sandra, additional, Dobrovolskaya, Maria, additional, Makarov, Nikolaj, additional, Read, Chris, additional, Van Twest, Melanie, additional, Sagona, Claudia, additional, Ramsl, Peter C., additional, Akar, Murat, additional, Yener, K. Aslihan, additional, Ballestero, Eduardo Carmona, additional, Cucca, Francesco, additional, Mazzarello, Vittorio, additional, Utrilla, Pilar, additional, Rademaker, Kurt, additional, Fernández-Domínguez, Eva, additional, Baird, Douglas, additional, Semal, Patrick, additional, Márquez-Morfín, Lourdes, additional, Roksandic, Mirjana, additional, Steiner, Hubert, additional, Salazar-García, Domingo Carlos, additional, Shishlina, Natalia, additional, Erdal, Yilmaz Selim, additional, Hallgren, Fredrik, additional, Boyadzhiev, Yavor, additional, Boyadzhiev, Kamen, additional, Küßner, Mario, additional, Sayer, Duncan, additional, Onkamo, Päivi, additional, Skeates, Robin, additional, Rojo-Guerra, Manuel, additional, Buzhilova, Alexandra, additional, Khussainova, Elmira, additional, Djansugurova, Leyla B., additional, Beisenov, Arman Z., additional, Samashev, Zainolla, additional, Massy, Ken, additional, Mannino, Marcello, additional, Moiseyev, Vyacheslav, additional, Mannermaa, Kristiina, additional, Balanovsky, Oleg, additional, Deguilloux, Marie-France, additional, Reinhold, Sabine, additional, Hansen, Svend, additional, Kitov, Egor P., additional, Dobeš, Miroslav, additional, Ernée, Michal, additional, Meller, Harald, additional, Alt, Kurt W., additional, Prüfer, Kay, additional, Warinner, Christina, additional, Schiffels, Stephan, additional, Stockhammer, Philipp W., additional, Bos, Kirsten, additional, Posth, Cosimo, additional, Herbig, Alexander, additional, Haak, Wolfgang, additional, Krause, Johannes, additional, and Kühnert, Denise, additional
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- 2021
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11. Occurrence of Anti-Rickettsia spp. Antibodies in Hospitalized Patients with Undifferentiated Febrile Illness in the Southern Region of Kazakhstan
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Turebekov, Nurkeldi, primary, Abdiyeva, Karlygash, additional, Yegemberdiyeva, Ravilya, additional, Kuznetsov, Andrey, additional, Dmitrovskiy, Andrey, additional, Yeraliyeva, Lyazzat, additional, Shapiyeva, Zhanna, additional, Batyrbayeva, Dinara, additional, Tukhanova, Nur, additional, Shin, Anna, additional, Musralina, Lyazzat, additional, Hoelscher, Michael, additional, Froeschl, Guenter, additional, Dobler, Gerhard, additional, Freimueller, Klaus, additional, Wagner, Edith, additional, Frey, Stefan, additional, and Essbauer, Sandra, additional
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- 2021
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12. Ten millennia of hepatitis B virus evolution
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Universidad de Alicante. Departamento de Prehistoria, Arqueología, Historia Antigua, Filología Griega y Filología Latina, Universidad de Alicante. Departamento de Biotecnología, Universidad de Alicante. Instituto Universitario de Investigación en Arqueología y Patrimonio Histórico, Kocher, Arthur, Papac, Luka, Barquera, Rodrigo, Key, Felix M., Spyrou, Maria A., Hübler, Ron, Rohrlach, Adam B., Aron, Franziska, Stahl, Raphaela, Wissgott, Antje, van Bömmel, Florian, Pfefferkorn, Maria, Mittnik, Alissa, Villalba-Mouco, Vanessa, Neumann, Gunnar U., Rivollat, Maïté, van de Loosdrecht, Marieke S., Majander, Kerttu, Tukhbatova, Rezeda I., Musralina, Lyazzat, Ghalichi, Ayshin, Penske, Sandra, Sabin, Susanna, Michel, Megan, Gretzinger, Joscha, Nelson, Elizabeth A., Ferraz, Tiago, Nägele, Kathrin, Parker, Cody, Keller, Marcel, Guevara, Evelyn K., Feldman, Michal, Eisenmann, Stefanie, Skourtanioti, Eirini, Giffin, Karen, Gnecchi-Ruscone, Guido Alberto, Friederich, Susanne, Schimmenti, Vittoria, Khartanovich, Valery, Karapetian, Marina K., Chaplygin, Mikhail S., Kufterin, Vladimir V., Khokhlov, Aleksandr A., Chizhevsky, Andrey A., Stashenkov, Dmitry A., Kochkina, Anna F., Tejedor-Rodríguez, Cristina, García-Martínez-de-Lagrán, Íñigo, Arcusa Magallón, Héctor, Garrido-Pena, Rafael, Royo-Guillén, José I., Nováček, Jan, Rottier, Stéphane, Kacki, Sacha, Saintot, Sylvie, Kaverzneva, Elena, Belinskiy, Andrej B., Velemínský, Petr, Limburský, Petr, Kostka, Michal, Loe, Louise, Popescu, Elizabeth, Clarke, Rachel, Lyons, Alice, Mortimer, Richard, Sajantila, Antti, Chinique de Armas, Yadira, Hernandez Godoy, Silvia Teresita, Hernández-Zaragoza, Diana I., Pearson, Jessica, Binder, Didier, Lefranc, Philippe, Kantorovich, Anatoly R., Maslov, Vladimir E., Lai, Luca, Zoledziewska, Magdalena, Beckett, Jessica F., Langová, Michaela, Danielisová, Alžběta, Ingman, Tara, García Atiénzar, Gabriel, Miguel Ibáñez, María Paz de, Romero, Alejandro, Sperduti, Alessandra, Beckett, Sophie, Salter, Susannah J., Zilivinskaya, Emma D., Vasilev, Dmitry V., von Heyking, Kristin, Burger, Richard L., Salazar, Lucy C., Amkreutz, Luc, Navruzbekov, Masnav, Rosenstock, Eva, Alonso-Fernández, Carmen, Slavchev, Vladimir, Kalmykov, Alexey A., Atabiev, Biaslan Ch., Batieva, Elena, Alvarez Calmet, Micaela, Llamas, Bastien, Schultz, Michael, Krauß, Raiko, Jiménez Echevarría, Javier, Francken, Michael, Shnaider, Svetlana, de Knijff, Peter, Altena, Eveline, Van de Vijver, Katrien, Fehren-Schmitz, Lars, Tung, Tiffiny A., Lösch, Sandra, Dobrovolskaya, Maria, Makarov, Nikolaj, Read, Chris, Van Twest, Melanie, Sagona, Claudia, Ramsl, Peter C., Akar, Murat, Yener, K. Aslihan, Carmona Ballestero, Eduardo, Cucca, Francesco, Mazzarello, Vittorio, Utrilla, Pilar, Rademaker, Kurt, Fernández Domínguez, Eva, Baird, Douglas, Semal, Patrick, Márquez-Morfín, Lourdes, Roksandic, Mirjana, Steiner, Hubert, Salazar-García, Domingo C., Shishlina, Natalia, Erdal, Yilmaz Selim, Hallgren, Fredrik, Boyadzhiev, Yavor, Boyadzhiev, Kamen, Küßner, Mario, Sayer, Duncan, Onkamo, Päivi, Skeates, Robin, Rojo-Guerra, Manuel A., Buzhilova, Alexandra, Khussainova, Elmira, Djansugurova, Leyla B., Beisenov, Arman Z., Samashev, Zainolla, Massy, Ken, Mannino, Marcello, Moiseyev, Vyacheslav, Mannermaa, Kristiina, Balanovsky, Oleg, Deguilloux, Marie-France, Reinhold, Sabine, Hansen, Svend, Kitov, Egor P., Dobeš, Miroslav, Ernée, Michal, Meller, Harald, Alt, Kurt W., Prüfer, Kay, Warinner, Christina, Schiffels, Stephan, Stockhammer, Philipp W., Bos, Kirsten, Posth, Cosimo, Herbig, Alexander, Haak, Wolfgang, Krause, Johannes, Kühnert, Denise, Universidad de Alicante. Departamento de Prehistoria, Arqueología, Historia Antigua, Filología Griega y Filología Latina, Universidad de Alicante. Departamento de Biotecnología, Universidad de Alicante. Instituto Universitario de Investigación en Arqueología y Patrimonio Histórico, Kocher, Arthur, Papac, Luka, Barquera, Rodrigo, Key, Felix M., Spyrou, Maria A., Hübler, Ron, Rohrlach, Adam B., Aron, Franziska, Stahl, Raphaela, Wissgott, Antje, van Bömmel, Florian, Pfefferkorn, Maria, Mittnik, Alissa, Villalba-Mouco, Vanessa, Neumann, Gunnar U., Rivollat, Maïté, van de Loosdrecht, Marieke S., Majander, Kerttu, Tukhbatova, Rezeda I., Musralina, Lyazzat, Ghalichi, Ayshin, Penske, Sandra, Sabin, Susanna, Michel, Megan, Gretzinger, Joscha, Nelson, Elizabeth A., Ferraz, Tiago, Nägele, Kathrin, Parker, Cody, Keller, Marcel, Guevara, Evelyn K., Feldman, Michal, Eisenmann, Stefanie, Skourtanioti, Eirini, Giffin, Karen, Gnecchi-Ruscone, Guido Alberto, Friederich, Susanne, Schimmenti, Vittoria, Khartanovich, Valery, Karapetian, Marina K., Chaplygin, Mikhail S., Kufterin, Vladimir V., Khokhlov, Aleksandr A., Chizhevsky, Andrey A., Stashenkov, Dmitry A., Kochkina, Anna F., Tejedor-Rodríguez, Cristina, García-Martínez-de-Lagrán, Íñigo, Arcusa Magallón, Héctor, Garrido-Pena, Rafael, Royo-Guillén, José I., Nováček, Jan, Rottier, Stéphane, Kacki, Sacha, Saintot, Sylvie, Kaverzneva, Elena, Belinskiy, Andrej B., Velemínský, Petr, Limburský, Petr, Kostka, Michal, Loe, Louise, Popescu, Elizabeth, Clarke, Rachel, Lyons, Alice, Mortimer, Richard, Sajantila, Antti, Chinique de Armas, Yadira, Hernandez Godoy, Silvia Teresita, Hernández-Zaragoza, Diana I., Pearson, Jessica, Binder, Didier, Lefranc, Philippe, Kantorovich, Anatoly R., Maslov, Vladimir E., Lai, Luca, Zoledziewska, Magdalena, Beckett, Jessica F., Langová, Michaela, Danielisová, Alžběta, Ingman, Tara, García Atiénzar, Gabriel, Miguel Ibáñez, María Paz de, Romero, Alejandro, Sperduti, Alessandra, Beckett, Sophie, Salter, Susannah J., Zilivinskaya, Emma D., Vasilev, Dmitry V., von Heyking, Kristin, Burger, Richard L., Salazar, Lucy C., Amkreutz, Luc, Navruzbekov, Masnav, Rosenstock, Eva, Alonso-Fernández, Carmen, Slavchev, Vladimir, Kalmykov, Alexey A., Atabiev, Biaslan Ch., Batieva, Elena, Alvarez Calmet, Micaela, Llamas, Bastien, Schultz, Michael, Krauß, Raiko, Jiménez Echevarría, Javier, Francken, Michael, Shnaider, Svetlana, de Knijff, Peter, Altena, Eveline, Van de Vijver, Katrien, Fehren-Schmitz, Lars, Tung, Tiffiny A., Lösch, Sandra, Dobrovolskaya, Maria, Makarov, Nikolaj, Read, Chris, Van Twest, Melanie, Sagona, Claudia, Ramsl, Peter C., Akar, Murat, Yener, K. Aslihan, Carmona Ballestero, Eduardo, Cucca, Francesco, Mazzarello, Vittorio, Utrilla, Pilar, Rademaker, Kurt, Fernández Domínguez, Eva, Baird, Douglas, Semal, Patrick, Márquez-Morfín, Lourdes, Roksandic, Mirjana, Steiner, Hubert, Salazar-García, Domingo C., Shishlina, Natalia, Erdal, Yilmaz Selim, Hallgren, Fredrik, Boyadzhiev, Yavor, Boyadzhiev, Kamen, Küßner, Mario, Sayer, Duncan, Onkamo, Päivi, Skeates, Robin, Rojo-Guerra, Manuel A., Buzhilova, Alexandra, Khussainova, Elmira, Djansugurova, Leyla B., Beisenov, Arman Z., Samashev, Zainolla, Massy, Ken, Mannino, Marcello, Moiseyev, Vyacheslav, Mannermaa, Kristiina, Balanovsky, Oleg, Deguilloux, Marie-France, Reinhold, Sabine, Hansen, Svend, Kitov, Egor P., Dobeš, Miroslav, Ernée, Michal, Meller, Harald, Alt, Kurt W., Prüfer, Kay, Warinner, Christina, Schiffels, Stephan, Stockhammer, Philipp W., Bos, Kirsten, Posth, Cosimo, Herbig, Alexander, Haak, Wolfgang, Krause, Johannes, and Kühnert, Denise
- Abstract
Hepatitis B virus (HBV) has been infecting humans for millennia and remains a global health problem, but its past diversity and dispersal routes are largely unknown. We generated HBV genomic data from 137 Eurasians and Native Americans dated between ~10,500 and ~400 years ago. We date the most recent common ancestor of all HBV lineages to between ~20,000 and 12,000 years ago, with the virus present in European and South American hunter-gatherers during the early Holocene. After the European Neolithic transition, Mesolithic HBV strains were replaced by a lineage likely disseminated by early farmers that prevailed throughout western Eurasia for ~4000 years, declining around the end of the 2nd millennium BCE. The only remnant of this prehistoric HBV diversity is the rare genotype G, which appears to have reemerged during the HIV pandemic.
- Published
- 2021
13. Ten millennia of hepatitis B virus evolution
- Author
-
Max Planck Society, European Commission, Slovak Academy of Sciences, Academy of Sciences of the Czech Republic, Russian Foundation for Basic Research, German Research Foundation, Agence Nationale de la Recherche (France), Wenner-Gren Foundation, Ministry of Education and Science (Kazakhstan), Kocher, Arthur, Papac, Luka, Barquera, Rodrigo, Key, Félix M., Spyrou, María A., Hübler, Ron, Rohrlach, Adam B., Aron, Franziska, Stahl, Raphaela, Wissgott, Antje, Van Bömmel, Florian, Arcusa-Magallón, Héctor, Garrido-Pena, Rafael, Schultz, Michael, Royo-Guillén, José Ignacio, Nováček, Jan, Rottier, Stéphane, Kacki, Sacha, Saintot, Sylvie, Kaverzneva, Elena, Belinskiy, Andrej B., Akar, Murat, Velemínský, Petr, Limburský, Petr, Kostka, Michal, Krauß, Raiko, Loe, Louise, Popescu, Elizabeth, Clarke, Rachel, Lyons, Alice, Mortimer, Richard, Sajantila, Antti, Yener, K. Aslihan, Chinique de Armas, Yadira, Hernández Godoy, Silvia Teresita, Hernández-Zaragoza, Diana I., Pearson, Jessica, Jiménez Echevarría, Javier, Binder, Didier, Lefranc, Philippe, Kantorovich, Anatoly R., Maslov, Vladimir E., Lai, Luca, Mittnik, Alissa, Zoledziewska, Magdalena, Beckett, Jessica F., Langová, Michaela, Danielisová, Alžběta, Ingman, Tara, Francken, Michael, García Atiénzar, Gabriel, Miguel Ibáñez, María Paz de, Romero Jódar, Alejandro, Sperduti, Alessandra, Carmona Ballestero, Eduardo, Beckett, Sophie, Salter, Susannah J., Zilivinskaya, Emma D., Vasilev, Dmitry V., Heyking, Kristin von, Burger, Richard L., Shnaider, Svetlana, Salazar, Lucy C., Amkreutz, Luc, Navruzbekov, Masnav, Cucca, Francesco, Rosenstock, Eva, Alonso-Fernández, Carmen, Slavchev, Vladimir, Kalmykov, Alexey A., Atabiev, Biaslan Ch., Batieva, Elena, Álvarez Calmet, Micaela, Knijff, Peter de, Altena, Eveline, Van de Vijver, Katrien, Mazzarello, Vittorio, Fehren-Schmitz, Lars, Pfefferkorn, María, Tung, Tiffiny A., Lösch, Sandra, Dobrovolskaya, María, Makarov, Nikolaj, Read, Chris, Van Twest, Melanie, Sagona, Claudia, Ramsl, Peter C., Utrilla, Pilar, Rademaker, Kurt, Fernández-Domínguez, Eva, Baird, Douglas, Guevara, Evelyn K., Semal, Patrick, Márquez-Morfín, Lourdes, Roksandic, Mirjana, Villalba-Mouco, Vanessa, Steiner, Hubert, Salazar García, Domingo Carlos, Shishlina, Natalia, Selim Erdal, Yilmaz, Hallgren, Fredrik, Boyadzhiev, Yavor, Feldman, Michal, Boyadzhiev, Kamen, Küßner, Mario, Sayer, Duncan, Onkamo, Päivi, Neumann, Gunnar U., Skeates, Robin, Rojo-Guerra, Manuel, Buzhilova, Alexandra, Khussainova, Elmira, Djansugurova, Leyla B., Eisenmann, Stefanie, Beisenov, Arman Z., Samashev, Zainolla, Massy, Ken, Mannino, Marcello A., Moiseyev, Vyacheslav, Rivollat, Maïté, Mannermaa, Kristiina, Balanovsky, Oleg, Deguilloux, Marie-France, Reinhold, Sabine, Skourtanioti, Eirini, Hansen, Svend, Kitov, Egor, Dobeš, Miroslav, Ernée, Michal, Meller, Harald, Alt, Kurt W., Van de Loosdrech, Marieke S., Prüfer, Kay, Warinner, Christina, Schiffels, Stephan, Giffin, Karen, Stockhammer, Philipp W., Bos, Kirsten, Posth, Cosimo, Herbig, Alexander, Haak, Wolfgang, Krause, Johannes, Kühnert, Denise, Majander, Kerttu, Tukhbatova, Rezeda I., Musralina, Lyazzat, Gnecchi Ruscone, Guido Alberto, Ghalichi, Ayshin, Penske, Sandra, Sabin, Susanna, Michel, Megan, Gretzinger, Joscha, Nelson, Elizabeth A., Ferraz, Tiago, Nägele, Kathrin, Parker, Cody, Keller, Marcel, Friederich, Susanne, Schimmenti, Vittoria, Khartanovich, Valery, Karapetian, Marina K., Llamas, Bastien, Chaplygin, Mikhail S., Kufterin, Vladimir V., Khokhlov, Aleksander, Chizhevsky, Andrey A., Stashenkov, Dmitry A., Kochkina, Anna F., Tejedor-Rodríguez, Cristina, García-Martínez de Lagrán, Íñigo, Max Planck Society, European Commission, Slovak Academy of Sciences, Academy of Sciences of the Czech Republic, Russian Foundation for Basic Research, German Research Foundation, Agence Nationale de la Recherche (France), Wenner-Gren Foundation, Ministry of Education and Science (Kazakhstan), Kocher, Arthur, Papac, Luka, Barquera, Rodrigo, Key, Félix M., Spyrou, María A., Hübler, Ron, Rohrlach, Adam B., Aron, Franziska, Stahl, Raphaela, Wissgott, Antje, Van Bömmel, Florian, Arcusa-Magallón, Héctor, Garrido-Pena, Rafael, Schultz, Michael, Royo-Guillén, José Ignacio, Nováček, Jan, Rottier, Stéphane, Kacki, Sacha, Saintot, Sylvie, Kaverzneva, Elena, Belinskiy, Andrej B., Akar, Murat, Velemínský, Petr, Limburský, Petr, Kostka, Michal, Krauß, Raiko, Loe, Louise, Popescu, Elizabeth, Clarke, Rachel, Lyons, Alice, Mortimer, Richard, Sajantila, Antti, Yener, K. Aslihan, Chinique de Armas, Yadira, Hernández Godoy, Silvia Teresita, Hernández-Zaragoza, Diana I., Pearson, Jessica, Jiménez Echevarría, Javier, Binder, Didier, Lefranc, Philippe, Kantorovich, Anatoly R., Maslov, Vladimir E., Lai, Luca, Mittnik, Alissa, Zoledziewska, Magdalena, Beckett, Jessica F., Langová, Michaela, Danielisová, Alžběta, Ingman, Tara, Francken, Michael, García Atiénzar, Gabriel, Miguel Ibáñez, María Paz de, Romero Jódar, Alejandro, Sperduti, Alessandra, Carmona Ballestero, Eduardo, Beckett, Sophie, Salter, Susannah J., Zilivinskaya, Emma D., Vasilev, Dmitry V., Heyking, Kristin von, Burger, Richard L., Shnaider, Svetlana, Salazar, Lucy C., Amkreutz, Luc, Navruzbekov, Masnav, Cucca, Francesco, Rosenstock, Eva, Alonso-Fernández, Carmen, Slavchev, Vladimir, Kalmykov, Alexey A., Atabiev, Biaslan Ch., Batieva, Elena, Álvarez Calmet, Micaela, Knijff, Peter de, Altena, Eveline, Van de Vijver, Katrien, Mazzarello, Vittorio, Fehren-Schmitz, Lars, Pfefferkorn, María, Tung, Tiffiny A., Lösch, Sandra, Dobrovolskaya, María, Makarov, Nikolaj, Read, Chris, Van Twest, Melanie, Sagona, Claudia, Ramsl, Peter C., Utrilla, Pilar, Rademaker, Kurt, Fernández-Domínguez, Eva, Baird, Douglas, Guevara, Evelyn K., Semal, Patrick, Márquez-Morfín, Lourdes, Roksandic, Mirjana, Villalba-Mouco, Vanessa, Steiner, Hubert, Salazar García, Domingo Carlos, Shishlina, Natalia, Selim Erdal, Yilmaz, Hallgren, Fredrik, Boyadzhiev, Yavor, Feldman, Michal, Boyadzhiev, Kamen, Küßner, Mario, Sayer, Duncan, Onkamo, Päivi, Neumann, Gunnar U., Skeates, Robin, Rojo-Guerra, Manuel, Buzhilova, Alexandra, Khussainova, Elmira, Djansugurova, Leyla B., Eisenmann, Stefanie, Beisenov, Arman Z., Samashev, Zainolla, Massy, Ken, Mannino, Marcello A., Moiseyev, Vyacheslav, Rivollat, Maïté, Mannermaa, Kristiina, Balanovsky, Oleg, Deguilloux, Marie-France, Reinhold, Sabine, Skourtanioti, Eirini, Hansen, Svend, Kitov, Egor, Dobeš, Miroslav, Ernée, Michal, Meller, Harald, Alt, Kurt W., Van de Loosdrech, Marieke S., Prüfer, Kay, Warinner, Christina, Schiffels, Stephan, Giffin, Karen, Stockhammer, Philipp W., Bos, Kirsten, Posth, Cosimo, Herbig, Alexander, Haak, Wolfgang, Krause, Johannes, Kühnert, Denise, Majander, Kerttu, Tukhbatova, Rezeda I., Musralina, Lyazzat, Gnecchi Ruscone, Guido Alberto, Ghalichi, Ayshin, Penske, Sandra, Sabin, Susanna, Michel, Megan, Gretzinger, Joscha, Nelson, Elizabeth A., Ferraz, Tiago, Nägele, Kathrin, Parker, Cody, Keller, Marcel, Friederich, Susanne, Schimmenti, Vittoria, Khartanovich, Valery, Karapetian, Marina K., Llamas, Bastien, Chaplygin, Mikhail S., Kufterin, Vladimir V., Khokhlov, Aleksander, Chizhevsky, Andrey A., Stashenkov, Dmitry A., Kochkina, Anna F., Tejedor-Rodríguez, Cristina, and García-Martínez de Lagrán, Íñigo
- Abstract
Hepatitis B virus (HBV) has been infecting humans for millennia and remains a global health problem, but its past diversity and dispersal routes are largely unknown. We generated HBV genomic data from 137 Eurasians and Native Americans dated between ~10,500 and ~400 years ago. We date the most recent common ancestor of all HBV lineages to between ~20,000 and 12,000 years ago, with the virus present in European and South American hunter-gatherers during the early Holocene. After the European Neolithic transition, Mesolithic HBV strains were replaced by a lineage likely disseminated by early farmers that prevailed throughout western Eurasia for ~4000 years, declining around the end of the 2nd millennium BCE. The only remnant of this prehistoric HBV diversity is the rare genotype G, which appears to have reemerged during the HIV pandemic.
- Published
- 2021
14. Ancient genomic time transect from the Central Asian Steppe unravels the history of the Scythians
- Author
-
Gnecchi-Ruscone, Guido Alberto, primary, Khussainova, Elmira, additional, Kahbatkyzy, Nurzhibek, additional, Musralina, Lyazzat, additional, Spyrou, Maria A., additional, Bianco, Raffaela A., additional, Radzeviciute, Rita, additional, Martins, Nuno Filipe Gomes, additional, Freund, Caecilia, additional, Iksan, Olzhas, additional, Garshin, Alexander, additional, Zhaniyazov, Zhassulan, additional, Bekmanov, Bakhytzhan, additional, Kitov, Egor, additional, Samashev, Zainolla, additional, Beisenov, Arman, additional, Berezina, Natalia, additional, Berezin, Yakov, additional, Bíró, András Zsolt, additional, Évinger, Sándor, additional, Bissembaev, Arman, additional, Akhatov, Gaziz, additional, Mamedov, Aslan, additional, Onggaruly, Akhan, additional, Voyakin, Dmitriy, additional, Chotbayev, Aidos, additional, Kariyev, Yeldos, additional, Buzhilova, Alexandra, additional, Djansugurova, Leyla, additional, Jeong, Choongwon, additional, and Krause, Johannes, additional
- Published
- 2021
- Full Text
- View/download PDF
15. Serological investigation of orthohantaviruses in patients with fever of unknown origin in Kazakhstan
- Author
-
Tukhanova, Nur, primary, Shin, Anna, additional, Abdiyeva, Karlygash, additional, Turebekov, Nurkeldi, additional, Yeraliyeva, Lyazzat, additional, Yegemberdiyeva, Ravilya, additional, Shapiyeva, Zhanna, additional, Froeschl, Guenter, additional, Hoelscher, Michael, additional, Wagner, Edith, additional, Rösel, Kerstin, additional, Zhalmagambetova, Aliya, additional, Musralina, Lyazzat, additional, Frey, Stefan, additional, and Essbauer, Sandra, additional
- Published
- 2020
- Full Text
- View/download PDF
16. AN EARLY HISTORY OF THE SECOND PLAGUE PANDEMIC IN 14TH-CENTURY CENTRAL EURASIA.
- Author
-
Spyrou, Maria A., Musralina, Lyazzat, Ruscone, Guido A. Gnecchi, Kocher, Arthur, Borbone, Pier-Giorgio, Khartanovich, Valeri I., Buzhilova, Alexandra, Djansugurova, Leyla, Bos, Kirsten I., Kühnert, Denise, Haak, Wolfgang, Slavin, Philip, and Krause, Johannes
- Subjects
BLACK Death pandemic, 1348-1351 ,FOSSIL DNA ,COMMUNICABLE diseases ,ARCHAEOLOGICAL excavations - Abstract
The Black Death (1346-1353 CE) was the initial wave of the so-called Second Plague Pandemic, which lasted until the 19th century and is known to have affected Europe, Asia and Africa. While the pandemic has been characterized as one of the largest infectious disease catastrophes of the pre-modern era, its origins remain unclear and have been a topic of continuous debate. At present, such discussions are not only limited to the pandemic's geographic source, including the proposed regions of western, central and eastern Asia, but also include different views on its temporal framing. Moreover, ancient DNA research has to date maintained a somewhat narrow geographical focus on the Second Plague Pandemic. Ancient Yersinia pestis genomes have been exclusively retrieved from epidemic sites from the 14th to 18th centuries in western Eurasia. While these data have provided valuable insights regarding extinct Y. pestis diversity and the pandemic's progression within Europe, they have provided little information on its primary source. Here, we present newly generated ancient Y. pestis genomic data from archaeological sites in present-day Kyrgyzstan, central Eurasia. Such sites have been shown to contain epidemic victims from the 14th century, precisely dated based on tombstone inscriptions. Our synthesis of archaeological, historical and ancient genomic data shows a clear association of the identified strains with the pandemic's geographic and temporal source. These data provide a precise framework towards characterizing the early dispersal history of the Second Plague Pandemic. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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