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This article provides an overview of the biodiversity and evolution of African flora. Africa is home to a diverse range of ecosystems and has a rich variety of vascular plants, with over 65,000 recorded species. However, the cataloging of African plant diversity is uneven, with some regions well-documented and others barely explored. The article also explores the biogeographic history of African plants, the role of fire in shaping the flora, and the impact of climate change on plant diversity. The authors emphasize the need for conservation efforts specific to Africa, as the processes that have shaped its flora differ from those in other parts of the world. They also highlight the gaps in our understanding of African plant diversity and call for further research and data collection. [Extracted from the article]

Ecologically specialized plants are expected to be at greater risk of extinction than generalists due to climate change. Such risk is greatest in biodiversity hotspots such as the Greater Cape Floristic Region (GCFR), which accommodates both ecological specialists and generalists. Thesium L., a genus with the highest number of species in Santalaceae and the most diverse in Africa, offers an appropriate system for evaluating both the correlates of range extent and specialization and the relative extinction risks associated with both. We hypothesized that range size, ecological specialization, and consequent climatically modulated extinction risks are all phylogenetically structured, such that climate change will precipitate a disproportionate loss of phylogenetic diversity in the GCFR Thesium. Past and future species distribution ranges were predicted using MaxEnt models based on present‐day occurrences and environmental conditions. Of the 101 Thesium species modeled, 70% have had large range sizes during the Last Glacial Maximum (LGM), 50% currently have a large range size, and future conditions are predicted to allow 40% to obtain large range sizes. Between the LGM and the present, 17% of species are thought to have undergone a contraction of available range space in the present time whereas 37% are expected to expand their ranges into the future, while 51% of species will experience range contractions. Of the 65 species currently ranked as Least Concern in the South African Red List, 24% will likely shift into higher extinction risk categories. Interestingly, 8.5% of ecological specialists, although having experienced a range reduction from the LGM to the present, are predicted to persist in the face of future climate change. However, the range extent, ecological specialization, and extinction risk are phylogenetically random and therefore should have a negligible impact on the phylogenetic diversity of the GCFR Thesium. [ABSTRACT FROM AUTHOR]

As recently circumscribed, Sesamum was rendered monophyletic by including the three segregate genera Ceratotheca , Dicerocaryum and Josephinia. Here, the monophyly of Sesamum and the currently accepted infrageneric taxa was tested using expanded phylogenetic analyses. In addition, nine taxonomically useful morphological characters were optimized on the resulting phylogenetic tree to assess their evolutionary pattern. The phylogenetic analyses support the expanded circumscription of Sesamum and the monophyly of Sesamum section Sesamum relative to Sesamum sections Aptera, Ceratotheca , Chamaesesamum , Dicerocaryum , Josephinia and Sesamoptera. Most sections were retrieved as monophyletic, except Sesamum section Ceratotheca which was shown to be paraphyletic. Character reconstruction infers the ancestor of Sesamum to have had an erect growth habit, simple leaves with entire margins, ovaries with incompletely divided locules, indehiscent capsules that are oblong-quadrangular in lateral view with a beaked apex and winged seeds. Relative to the ancestral states, Sesamum has dehiscent fruits and fully divided locules as synapomorphies, with reversals to the ancestral state (indehiscence, undivided locules) in Sesamum sections Josephinia and Dicerocaryum. The absence of trichomes on mature vegetative parts and the development of lobed leaves are synapomorphies for Sesamum section Sesamopteris. Characters such as dentate and lobulate leaf margins and discoid fruit with horn-like protrusions are homoplastic in Sesamum. Dated phylogeny and ancestral range estimation suggest a southern African origin for the genus with subsequent diversification to tropical Africa, India and Australia. Sesamum has an estimated crown age of 38.1 ± 5.2 Myr with subsequent dispersal scenarios into tropical Africa, Asia and Australia during the Miocene from 24.5 Mya. Dispersal, rather than continental vicariance, is the probable explanation for the pantropical distribution of Sesamum. [ABSTRACT FROM AUTHOR]

Background and Aims It is unclear how widespread polyploidy is throughout the largest holocentric plant family – the Cyperaceae. Because of the prevalence of chromosomal fusions and fissions, which affect chromosome number but not genome size, it can be impossible to distinguish if individual plants are polyploids in holocentric lineages based on chromosome count data alone. Furthermore, it is unclear how differences in genome size and ploidy levels relate to environmental correlates within holocentric lineages, such as the Cyperaceae. Methods We focus our analyses on tribe Schoeneae, and more specifically the southern African clade of Schoenus. We examine broad-scale patterns of genome size evolution in tribe Schoeneae and focus more intensely on determining the prevalence of polyploidy across the southern African Schoenus by inferring ploidy level with the program ChromEvol, as well as interpreting chromosome number and genome size data. We further investigate whether there are relationships between genome size/ploidy level and environmental variables across the nutrient-poor and summer-arid Cape biodiversity hotspot. Key Results Our results show a large increase in genome size, but not chromosome number, within Schoenus compared to other species in tribe Schoeneae. Across Schoenus , there is a positive relationship between chromosome number and genome size, and our results suggest that polyploidy is a relatively common process throughout the southern African Schoenus. At the regional scale of the Cape, we show that polyploids are more often associated with drier locations that have more variation in precipitation between dry and wet months, but these results are sensitive to the classification of ploidy level. Conclusions Polyploidy is relatively common in the southern African Schoenus , where a positive relationship is observed between chromosome number and genome size. Thus, there may be a high incidence of polyploidy in holocentric plants, whose cell division properties differ from monocentrics. [ABSTRACT FROM AUTHOR]

Thesium muasyae, a new species of the family Santalaceae, is described and illustrated. This species has unique morphological and ecological characters, differentiating it from other closely related species of the genus, such as T. karooicum. These characters include plants forming compact shrubs to about 30 cm tall with glabrous surfaces; leaves recurved, to about 4 cm long, terete to triangular, apiculate; flowers placed in lax spikes or borne solitary; and style up to about 2.5 mm long. Ecologically, T. muasyae is endemic to the limestone fynbos in the Overberg, Bredasdorp District, South Africa. Molecular phylogenetic evidence places this species in Subgenus Frisea Section Barbata, as closest sister to T. hispidulum + T. karooicum. A preliminary conservation Red List assessment suggests that T. muasyae is Critically Endangered, based on its population size, area of occupancy and extent of occurrence. [ABSTRACT FROM AUTHOR]

• Rooibos plants had 50% less biomass when grown at low moisture. • Plants avoided drought stress through the production of long roots. • Rooibos exhibited non-stomatal limitations to photosynthesis during drought. • Longer roots and high root/shoot ratios allowed for higher RWC well into drought. • Production of polyphenols allowed the plants a degree of protection. In recent decades climate change has impacted ecosystems negatively globally with Mediterranean systems being particularly vulnerable. Changes in rainfall pattern and amounts have led to increases in flooding and droughts in certain areas of the world. Many important agricultural crops such as Aspalathus linearis (Burm.f.) R. Dahlgren, rooibos tea, rely on the Mediterranean-type seasonality in the Western Cape, South Africa. Aspalathus linearis plants, which occur naturally in the Cedarberg, grow in hot and dry summer conditions and have a root that penetrates the soil down to 2 m, yet no work has looked at the root response to drought under low rainfall environments. The objective of this study was to determine the physiological and morphological response of A. linearis plants grown at two different water regimes to drought. A potted glasshouse experiment was carried out where drought stress (withdrawing watering) was imposed on well-watered and low moisture supplied plants. The low moisture droughted plants exhibited drought tolerant mechanisms which included higher root/shoot ratios as well as thinner roots, both of which are effective for water and nutrient uptake. Overall, plants in the 30% FC treatment recorded lower P max , g s and E after three days in the drought conditions while 70% FC plants were only affected after five days. Furthermore, plants grown under low moisture conditions produced 50% lower biomass compared to plants grown under adequate moisture conditions. This implies that low rainfall and the occurrences of dry spells and drought, associated with climate change are likely to reduce the production of A. linearis in the Cederberg area. [ABSTRACT FROM AUTHOR]

In the low-P soil of the fynbos biome, plants have evolved several morphological and physiological P acquisition and use mechanisms, leading to variable uptake and use efficiencies. We expected that plants grown in low-P soils would exhibit greater P acquisition traits and hypothesised that Aspalathus linearis (Burm. f.) R. Dahlgren, a cluster-root-forming species adapted to drier and infertile soils, would be the most efficient at P acquisition compared with other species. Three fynbos Fabales species were studied: A. linearis and Podalyria calyptrata (Retz.) Willd, both legumes, and Polygala myrtifolia L., a nonlegume. A potted experiment was conducted where the species were grown in two soil types with high P (41.18 mg kg-1) and low P (9.79 mg kg-1). At harvest, biomass accumulation, foliar nutrients and P acquisition mechanisms were assessed. Polygala myrtifolia developed a root system with greater specific root length, root hair width and an average root diameter that exuded a greater amount of citrate and, contrary to the hypothesis, exhibited greater whole-plant P uptake efficiency. However, P. calyptrata had higher P use efficiency, influenced by N availability through N2 fixation. Specific root length, root length and root : shoot ratio were promising morphological traits for efficient foraging of P, whereas acid phosphatase exudation was the best physiological trait for solubilisation of P. [ABSTRACT FROM AUTHOR]

Background: Dioscorea is a widely distributed and highly diversified genus in tropical regions where it is represented by ten main clades, one of which diversified exclusively in Africa. In southern Africa it is characterised by a distinct group of species with a pachycaul or "elephant's foot" structure that is partially to fully exposed above the substrate. In contrast to African representatives of the genus from other clades, occurring mainly in forest or woodland, the pachycaul taxa and their southern African relatives occur in diverse habitats ranging from woodland to open vegetation. Here we investigate patterns of diversification in the African clade, time of transition from forest to more open habitat, and morphological traits associated with each habitat and evaluate if such transitions have led to modification of reproductive organs and mode of dispersal. Results: The Africa clade originated in the Oligocene and comprises four subclades. The Dioscorea buchananii subclade (southeastern tropical Africa and South Africa) is sister to the East African subclade, which is respectively sister to the recently evolved sister South African (e. g., Cape and Pachycaul) subclades. The Cape and Pachycaul subclades diversified in the east of the Cape Peninsula in the mid Miocene, in an area with complex geomorphology and climate, where the fynbos, thicket, succulent karoo and forest biomes meet. Conclusions: Diversification out of forest is associated with major shifts in morphology of the perennial tuber (specifically an increase in size and orientation which presumably led them to become pachycaul) and rotation of stem (from twining to non-twining). The iconic elephant's foot morphology, observed in grasslands and thicket biomes, where its corky bark may offer protection against fire and herbivory, evolved since mid Miocene. A shift in pollination trait is observed within the forest, but entry into open habitat does not show association with reproductive morphology, except in the seed wing, which has switched from winged all round the seed margin to just at the base or at the apex of it, or has been even replaced by an elaiosome. [ABSTRACT FROM AUTHOR]

The genus Psoralea L., comprising about 70 species, has its centre of diversity and endemism in the Greater Cape Floristic Region of South Africa. Species delimitation and identification in the genus are difficult. Many putative species are unpublished or known only by manuscript names. As a first step to address this problem this study reports on the taxonomy of the Psoralea aphylla complex — a distinct group of species characterised by either a complete absence of leaves, a reduction of the leaves into scales, or the occurrence of small filiform leaflets. Plants may be suffrutices, small to large shrubs, or trees. Morphological and ecological analyses of herbarium specimens and recent field collections distinguished ten species within the complex. Three species ( P. aphylla L., P. filifolia Eckl. & Zeyh. and P. peratica C.H.Stirt.) are already published, while the seven other taxa have been known by manuscript names and are formalised in this paper ( P. congesta C.H.Stirt. & Muasya; P. fleta C.H.Stirt.; P. gigantea Dludlu, Muasya & C.H.Stirt.; P. pullata C.H.Stirt.; P. ramulosa C.H.Stirt.; P. rigidula C.H.Stirt.; and P. usitata C.H.Stirt.). We provide a key for the identification of all ten species along with full descriptions, illustrations, distribution maps and some notes on the conservation statuses of the species. [ABSTRACT FROM AUTHOR]

Many aquatic plant populations occur in isolated habitats surrounded by land masses which can act as barriers to gene flow, unless other mechanisms exist to facilitate connectivity. This isolation together with life history processes influences greatly genetic diversity and structure among populations of aquatic species. We assessed clonal diversity, genetic variation, and genetic structure of Cyperus papyrus that occur in large geographical scale in freshwater wetlands of Kenya using eight nuclear microsatellite markers. A total of 60 alleles were found across 14 populations. The genetic diversity measures varied widely among populations, with both Lakes Naivasha and Victoria displaying higher allelic and gene diversity than isolated wetlands. C. papyrus maintained relatively high levels of clonal diversity and gene diversity at species level ( P P = 79%, A T = 25, H E = 0.41, H O = 0.40) comparable to other clonal aquatic plants. Whereas, two monoclonal wetlands suggested recent founder effects, we attributed variation in clonal diversity to different levels of sexual reproduction and perennation among populations. AMOVA revealed overall high genetic differentiation among populations ( F ST = 0.250, p = 0.001) which varied from very low ( F ST = 0.014) within lakes to very high ( F ST = 0.565) among Lake Victoria–Rift Valley lakes and isolated wetlands. Lack of genetic differentiation among populations within Lakes Victoria and Naivasha implicated hydrochorous dispersal. A Mantel test showed significant isolation-by-distance among populations whereas a PCoA and Bayesian analysis of individuals grouped populations according to drainage basins. We hypothesized that connectivity among distant isolated locations could be by migratory waterfowl or large herbivores (through both endozoochory and epizoochory) and historical inter-basin connection. [ABSTRACT FROM AUTHOR]

Podalyria calyptrata is from fynbos soils with low availability of phosphorus (P) and nitrogen (N). We investigated the physiological basis for tolerance of low P supply in nodulated P. calyptrata and examined responses to increased supply of combined-N as Ca(NO 3 ) 2 and P. It was hypothesized that increasing supply of combined-N would stimulate P-acquisition mechanisms and enhance plant growth with high P supply. Biomass, leaf [N] and [P], organic acid and phosphatase root exudates, and phosphoenolpyruvate carboxylase (PEPC) and malate dehydrogenase (MDH) activity in nodules and roots were examined in two N × P experiments. Low P supply decreased leaf [P] and limited growth, decreasing the nodule:root ratio but increasing nodular PEPC and MDH activity for enhanced P-acquisition or P-utilization. At low P supply, a N-induced demand for P increased root exudation of citrate and PEPC and MDH activity in roots. Greater combined-N supply inhibited nodulation more at low P supply than at high P supply. With a P-induced demand for N the plants nodulated prolifically and increased combined-N supply did not enhance plant growth. The physiological basis for N 2 -fixing P. calyptrata tolerating growth at low P supply and responding to greater P supply is through balanced acquisition of P and N for plant demand. [ABSTRACT FROM AUTHOR]

We investigated the physiological basis for tolerance of limiting P supply and for enhanced growth with simultaneous addition of N and P in Aspalathus linearis (Burm. f.) R. Dahlgren. It was hypothesised that increasing N supply would stimulate P acquisition mechanisms and enhance plant growth with high P supply. In sand, plants received 100 µM, 300 µM, 500 µM and 700 µM N at a low P level of 10 µM and a high P level of 100 µM. In solution, plants received 200 µM and 500 µM N at a low P level of 5 µM and a high P level of 15 µM. Cluster roots formed only in plants with low P supply. Roots showed greater citrate and malate production and phosphatase activity at 5 µM P than at 15 µM P. At 10 µM P, greater N supply enhanced cluster root formation to 60% of root biomass, and increased the phosphatase activity of noncluster roots and succinate release by both root types. At a high P supply of 15 µM, greater N supply stimulated phosphatase activity of roots by 50%, increasing P uptake and plant growth. With increased resource partitioning towards P acquisition due to greater P demand, A. linearis is tolerant of low P supply and highly responsive to combined addition of N and P. The mechanisms for growth of Aspalathus linearis (Rooibos tea) in the nutrient-poor soils of the Core Cape subregion, and its response to combined addition of N and P, are not known. When addition of N induced low availability of P, the species increased partitioning of resources towards acquisition of P and also enhanced growth. Our findings show that plant growth is colimited by multiple resources. [ABSTRACT FROM AUTHOR]

Tinnea gombea, endemic to the Sudan savanna grasslands in northern Nigeria, is described and illustrated. We used integrative evidence from morphological characters, ecology and molecular phylogenetic data. The new species is morphologically and ecologically similar to T. barteri and T. aethiopica, but can be readily delimited from these taxa by unique characters including a subshrub growth habit, leaves alternate to subopposite, blades lanceolate, apically acuminate, inflorescences raceme, bearing solitary flowers in upper leaf and bract axils, lilac to purplish dusky flowers and the inflated fruits dehiscent. The distribution and habitat of T. gombea are also distinctive, being restricted to the Sudan savanna, while the two most similar species are widespread in tropical Africa. Additionally, molecular phylogenetic assessments using nrITS and chloroplast trnL-F, matK and rbcL support the placement of T. gombea as a distinct species. Tinnea gombea is here assessed as Critically Endangered due to its small population size and restriction to a small area lacking conservation prioritization. [ABSTRACT FROM AUTHOR]

Highlights: [•] Estimated seed number of Cyperus papyrus umbel ranged from 98,022 to 337,536. [•] Drawdown-flooding phases resulted in seedling recruitment, zonation and dispersal. [•] PCoA revealed genotypes in seedlings and parent stand belong to single gene pool. [•] Seedlings had more private allelic diversity than parent stands. [•] Spatial genetic structuring was detected at 100m distance in parent stands. [ABSTRACT FROM AUTHOR]

Poales represents more than one-third of all monocotyledons ( c. 20 000 species in 16 families) and constitutes a microcosm of the angiosperms. The extreme variation in species richness among the families of Poales is still not understood: Poaceae includes ∼10 000 species, whereas six families have fewer than ten species. Here, using the largest phylogenetic analysis of Poales to date, molecular dating, ancestral reconstructions and diversification analyses, we develop a macro-evolutionary and macro-ecological approach to seek correlates for changing diversification patterns. We show that the poalean families diverged in the Late Cretaceous, a time of high levels of CO2 and high rainfall. Our habitat reconstructions indicate that Poales inhabited open and dry habitats in this environment. We also demonstrate that lineages with CO2-concentrating mechanisms inhabiting dry and open environments exhibited higher diversification rates than C3, shade and wet lineages. CO2-concentrating mechanisms counteract the effects of low atmospheric CO2 and reduce phototranspiration. It is believed that the parallel evolution of C4 and CAM (Crassulacean acid metabolism) photosynthesis in Poaceae, Cyperaceae and Bromeliaceae is an adaptation to changes in atmospheric CO2 concentrations. Combinations of extrinsic and intrinsic factors might have played a role in shifts in diversification rates and may explain the variation in species richness in Poales. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 175, 4-16. [ABSTRACT FROM AUTHOR]

Extreme morphological reduction and convergent evolution can obscure taxonomic relationships. This phenomenon is frequently encountered in Cyperaceae, where characters traditionally used to diagnose genera have been shown to have evolved independently multiple times. The Ethiopian high-altitude perennial first described as Cyperus clandestinus was subsequently moved to Ficinia because it has spiral glume arrangement, unlike typical Cyperus species, which have distichous glume arrangement. However, this position has remained uncertain as no nutlets have previously been studied to establish the presence or absence of the gynophore - the synapomorphy for Ficinia. We resolve this 140-year-old puzzle by describing the morphology of the nutlet, which lacks a gynophore, and use DNA sequence data to resolve the taxon within Cyperus. Cyperus clandestinus was found to be closely related to Remirea maritima and Cyperus cyperoides in the C4 Cyperus clade, whose members predominantly have distichously arranged glumes. This provides further evidence for the unreliability of glume arrangement as a character to distinguish between members of the Cyperus and Ficinia clades, whereas gynophore presence is more congruent with molecular data. [ABSTRACT FROM AUTHOR]

* Premise of the study: The broad austral distribution of Schoeneae is almost certainly a product of long-distance dispersal. Owing to the inadequacies of existing phylogenetic data and a lack of rigorous biogeographic analysis, relationships within the tribe remain poorly resolved and its pattern of radiation and dispersal uncertain. We employed an expanded sampling of taxa and markers and a rigorous analytic approach to address these limitations. We evaluated the roles of geography and ecology in stimulating the initial radiation of the group and its subsequent dispersal across the southern hemisphere. * Methods: A dated tree was reconstructed using reversible-jump Markov chain Monte Carlo (MCMC) with a polytomy prior and molecular dating, applied to data from two nuclear and three cpDNA regions. Ancestral areas and habitats were inferred using dispersal--extinction--cladogenesis models. * Key results: Schoeneae originated in Australia in the Paleocene. The existence of a "hard" polytomy at the base of the clade reflects the rapid divergence of six principal lineages ca. 50 Ma, within Australia. From this ancestral area, Schoeneae have traversed the austral oceans with remarkable frequency, a total of 29 distinct dispersal events being reported here. Dispersal rates between landmasses are not explicable in terms of the geographical distances separating them. Transoceanic dispersal generally involved habitat stasis. * Conclusions: Although the role of dispersal in explaining global distribution patterns is now widely accepted, the apparent ease with which such dispersal may occur has perhaps been under-appreciated. In Schoeneae, transoceanic dispersal has been remarkably frequent, with ecological opportunity, rather than geography, being most important in dictating dispersal patterns. [ABSTRACT FROM AUTHOR]

A new species of Psoralea is described. Psoralea karooensis C.H. Stirt., Muasya & Vlok is endemic to mountain streams in the Klein Karoo region of the Western Cape Province, South Africa. The new species is characterised by its flexuose habit of many stiff bare stems with the seasonal shoots arising apically in clusters and its greenish cream flowers borne at the apex of 10--12 mm long peduncles each ending in a trifid cupulum. [ABSTRACT FROM AUTHOR]

The current study documented local utilization of Cyperus papyrus L. (papyrus), harvesting patterns, threats, and local management practices among the Endorois community living around Loboi swamp (Kenya). Papyrus is a highly productive freshwater macrophyte that is widely utilized throughout tropical Africa. However, increased human population and poverty, has led to over exploitation and conversion of papyrus wetlands to agricultural fields. Nonetheless, users of papyrus hold important local ecological knowledge (LEK) and practices. We show that Endorois practices on papyrus uses are compatible with the management priorities of the swamp and a wider conservation framework using data obtained from three focus group discussions (FGD), interviews of 34 households and 15 key informants. The study revealed that papyrus support local livelihood notably as a source of income (papyrus mats are sold), cattle fodder, roofing materials (shelter), and cooking fuel. The study further revealed important LEK relating to harvesting patterns, recovery after harvesting and traditional management practices. Correlation and principal component analyses showed that experienced old harvesters (EXPERT) avoided harvesting repeatedly at the same location (REVISIT), thereby allowing recovery of papyrus when compared to younger harvesters (r = 0.63, p < 0.01). However, over 70% of harvesters predicted a decrease in papyrus coverage in the future due to the current diversion of water from the swamp, and frequent droughts, despite the instituted traditional management strategies (e.g. rotational harvesting) to curb overharvesting. The study concluded that the documentation of site-scale papyrus users’ profile, LEK, and traditional practices are vital for the conservation and management of Loboi swamp. [Copyright &y& Elsevier]

The article presents comparative morphological studies of specimens included in Dioscorea gillettii which is common in Kenya and Ethiopia. The study is undertaken through a pollen morphology where results thereof show differentiation among those in Sidamo and Bale Provinces in Ethiopia and those in Kitui and the Meru Districts of Kenya. It also discussed the distribution map and the assessment of conservation status for D. kituiensis.

Using a DNA-based tree as the framework, the homology of key taxonomic characters in tribe Cypereae (900 species in 19 genera, the largest of which is Cyperus) is assessed and revisit the question of generic circumscription. Plastid DNA ( rbcL gene, rps16 intron, trnL intron and trnL-F intergenic spacer) sequence matrix for 50 species in 19 genera of Cypereae is analysed using the maximum parsimony algorithm of PAUP. Two major groups are observed: the Ficinia and Cyperus clades. The Ficinia clade includes taxa with a center of diversity in the Cape Floristic Region of South Africa. These are predominantly perennial herbs (with exception of Isolepis, which is predominantly annual) having non-Kranz (C3) anatomy and spirally arranged glumes. Species of the Cyperus clade have a predominatly distichous glume arrangement and Kranz anatomy which is either absent (C3) or present (C4). Cyperus is the core genus in the Cyperus clade, in which 13 additional segregate genera are embedded. These segregate genera differ from typical Cyperus in one or more of a few gross morphological characters. There are no unambiguous characters separating C3 and C4 Cyperus species. The circumscription of Cypereae is broadened to include all taxa with a Cyperus-type embryo and perianth segments. Three taxa possessing perianth segments, namely Hellmuthia membranacea, Scirpus falsus and S. ficinioides, are supported to be closer to Cyperus than to Scirpus. [ABSTRACT FROM AUTHOR]

In the last decade, efforts to reconstruct suprageneric phylogeny of the Cyperaceae have intensified. We present an analysis of 262 taxa representing 93 genera in 15 tribes, sequenced for the plastid rbcL and trnL-F (intron and intergenic spacer). Cyperaceae are monophyletic and resolved into two clades, here recognised as Mapanioideae and Cyperoideae, and the overall topology is similar to results from previous studies. Within Cyperoideae, Trilepideae are sister to rest of taxa whereas Cryptangieae, Bisboeckelerieae and Sclerieae are resolved within Schoeneae. Cladium and Rhynchospora (and Pleurostachys) are resolved into clades sister to the rest of Schoeneae, lending support to the recognition of these taxa in separate tribes. However, we retain these taxa in Schoeneae pending broader sampling of the group. The phylogenetic position of 40 species in 21 genera is presented in this study for the first time, elucidating their position in Abildgaardieae ( Trachystylis), Cryptangieae ( Didymiandrum, Exochogyne), Cypereae ( Androtrichum, Volkiella), Eleocharideae ( Chillania), and Schoeneae ( Calyptrocarya, Morelotia). More sampling effort (more taxa and the use of more rapidly evolving markers) is needed to resolve relationships in Fuireneae and Schoeneae. [ABSTRACT FROM AUTHOR]

Pollen and orbicule morphology of 84 species, representing 52 genera from all tribes and subfamilies are investigated, in order to assess the systematic value of palynological data and to determine palynological evolutionary trends in Cyperaceae. A total of 90% of the species are examined for the first time with scanning electron microscopy. Pollen grains of Cyperaceae are oblate spheroidal to perprolate in shape, inaperturate to polyporate with opercula or pontopercula on pori or colpi. We distinguished seven different sexine ornamentation patterns. Orbicules occur in all species investigated. Pollen morphological variation within Cyperaceae is considerable and includes dispersal unit; number, location and degree of differentiation of apertural zones; and sexine ornamentation patterns. In subfamily Mapanioideae both tribes can be characterized by palynological synapomorphies. However, in subfamily Cyperoideae, the observed pattern of variation does not fit the most recent molecular phylogeny due to high levels of homoplasy and polymorphism in major pollen characters. [ABSTRACT FROM AUTHOR]

The article looks into the phylogenetic relationships of 45 species of South American Lobeliaceae and two outgroup samples from Australia. Analyses revealed that a clade of four hexaploid Lobelia species from Chile is sister to a clade comprising Lysipomia, Siphocampylus, Centropogon and Burmeistera. The phylogenetic relationships between and within these four clades are explored and discussed.

Khaosokia caricoides, D.A. Simpson, Chayam. & J. Parn., a newly discovered genus and species of Cyperaceae is described and illustrated. The genus is characterized by a narrowly paniculate dioecious inflorescence with 2–4 nodes, each of the nodes having a leaf-like inflorescence bract that exceeds the inflorescence. Spikelets in both sexes are linear-cylindric and each flower has seven perianth bristles. The nutlet was immature in the specimens examined. The photosynthetic pathway is C3. Khaosokia is endemic to limestone cliffs in peninsular Thailand; its conservation status is assessed as Vulnerable (VU B1a + 2a). It has affinities to tribes Cariceae, Dulichieae and some members of Scirpeae, but the exact nature of these relationships has yet to be determined. A revised key to the genera of Cyperaceae in Thailand is presented. © 2005 The Linnean Society of London, Botanical Journal of the Linnean Society, 2005, 149, 357–364. [ABSTRACT FROM AUTHOR]

Premise Methods Results Conclusions Increases in genome size in plants—often associated with larger, low‐density stomata and greater water‐use efficiency (WUE)—could affect plant ecophysiological and hydraulic function. Variation in plant genome size is often due to polyploidy, having occurred repeatedly in the austral sedge genus Schoenus in the Cape Floristic Region (CFR), while species in the other major schoenoid genus in the region, Tetraria, have smaller genomes. Comparing these genera is useful as they co‐occur at the landscape level, under broadly similar bioclimatic conditions. We hypothesized that CFR Schoenus have greater WUE, with lower maximum stomatal conductance (gwmax) imposed by larger, less‐dense stomata.We investigated relationships between genome size and stomatal parameters in a phylogenetic context, reconstructing a phylogeny of CFR‐occurring Schoeneae (Cyperaceae). Species’ stomatal and functional traits were measured from field‐collected and herbarium specimens. Carbon stable isotopes were used as an index of WUE. Genome size was derived from flow‐cytometric measurements of leafy shoots.Evolutionary regressions demonstrated that stomatal size and density covary with genome size, positively and negatively, respectively, with genome size explaining 72–75% of the variation in stomatal size. Larger‐genomed species had lower gwmax and C:N ratios, particularly in culms.We interpret differences in vegetative physiology between the genera as evidence of more‐conservative strategies in CFR Schoenus compared to the more‐acquisitive Tetraria. Because Schoenus have smaller, reduced leaves, they likely rely more on culm photosynthesis than Tetraria. Across the CFR Schoeneae, ecophysiology correlates with genome size, but confounding sources of trait variation limit inferences about causal relationships between traits. [ABSTRACT FROM AUTHOR]

Background and Aims The quartz fields of the Greater Cape Floristic Region (GCFR) are arid and island-like special habitats, hosting ~142 habitat-specialized plant species, of which 81 % are local endemics, characterized by a rapid turnover of species between and among sites. We use several phylogenetic community metrics: (1) to examine species diversity and phylogenetic structure within and among quartz fields; (2) to investigate whether quartz field specialists are evolutionarily drawn from local species pools, whereas the alternative hypothesis posits that there is no significant evolutionary connection between quartz field specialists and the local species pools; and (3) to determine whether there is an association between certain traits and the presence of species in quartz fields. Methods We sampled and developed dated phylogenies for six species-rich angiosperm families (Aizoaceae, Asteraceae, Crassulaceae, Cyperaceae, Fabaceae and Santalaceae) represented in the quartz field floras of southern Africa. Specifically, we focused on the flora of three quartz field regions in South Africa (Knersvlakte, Little Karoo and Overberg) and their surrounding species pools to address our research questions by scoring traits associated with harsh environments. Key Results We found that the Overberg and Little Karoo had the highest level of species overlap for families Aizoaceae and Fabaceae, whereas the Knersvlakte and the Overberg had the highest species overlap for families Asteraceae, Crassulaceae and Santalaceae. Although our phylogenetic community structure and trait analyses showed no clear patterns, relatively low pairwise phylogenetic distances between specialists and their local species pools for Aizoaceae suggest that quartz species could be drawn evolutionarily from their surrounding areas. We also found that families Aizoaceae and Crassulaceae in Knersvlakte and Little Karoo were phylogenetically even. Conclusions Despite their proximity to one another within the GCFR, the studied areas differ in their species pools and the phylogenetic structure of their specialists. Our work provides further justification for increased conservation focus on these unique habitats under future scenarios of global change. [ABSTRACT FROM AUTHOR]

Background and Aims The Greater Cape Floristic Region is one of the world's biodiversity hotspots and is considered poor in polyploids. To test this assumption, ploidy variation was investigated in a widespread Cape shrub, Dicerothamnus rhinocerotis (renosterbos, Asteraceae). The aim was to elucidate the cytotype distribution and population composition across the species range, and to assess differences in morphology, environmental niches and genetics. Methods Ploidy level and genome size were determined via flow cytometry and cytotype assignment was confirmed by chromosome counting. Restriction site-associated DNA sequencing (RADseq) analyses were used to infer genetic relationships. Cytotype climatic and environmental niches were compared using a range of environmental layers and a soil model, while morphological differences were examined using multivariate methods. Key Results The survey of 171 populations and 2370 individuals showed that the species comprises diploid and tetraploid cytotypes, no intermediates and only 16.8 % of mixed populations. Mean 2C values were 1.80–2.06 pg for diploids and 3.48–3.80 pg for tetraploids, with very similar monoploid genome sizes. Intra-cytotype variation showed a significant positive correlation with altitude and longitude in both cytotypes and with latitude in diploids. Although niches of both cytotypes were highly equivalent and similar, their optima and breadth were shifted due to differences mainly in isothermality and available water capacity. Morphometric analyses showed significant differences in the leaves and corolla traits, the number of florets per capitulum, and cypsela dimensions between the two cytotypes. Genetic analyses revealed four groups, three of them including both cytotypes. Conclusions Dicerothamnus rhinocerotis includes two distinct cytotypes that are genetically similar. While tetraploids arise several times independently within different genetic groups, morphological and ecological differences are evident between cytotypes. Our results open up new avenues for questions regarding the importance of ploidy in the megadiverse Cape flora, and exemplify the need for population-based studies focused on ploidy variation. [ABSTRACT FROM AUTHOR]

• 95 plants, 65% wild, were used for treatments of 45 livestock ailments. • Datura stramonium was the most often cited species. • Asteraceae had highest therapeutic values. • Males, elders, and those with no formal education enumerated higher plant numbers • The highest informant consensus was for bloating, bloody diarrhea and eye infection Livestock production is an integral part of the agricultural industry in Ethiopia. However, livestock diseases are a major hindrance especially among rural communities lacking access to conventional veterinary services. This study was conducted to explore medicinal plants and practices used to treat livestock ailments across varied agro-climatic zones in northeastern Ethiopia. Ethnoveterinary data was collected between December 2019 and July 2020 across three districts using a semi-structured questionnaire with a total of 120 informants. Chi-square and ANOVA were used to compute ethnoveterinary indices among agro-climates. A total of 95 plants in 44 families were used by the healers for treatments of 45 livestock ailments mostly collected from wild habitat (70.65%). The leaves (39.05%), and crushing and pounding were the major parts and modes of herbal preparations. The analysis unveiled a significant association between numbers of ethnoveterinary plant citations with sex (P= 0.001) and age categories (P=0.02). Also, considerable variations in medicinal plants distribution, Use Value (UV), Relative Frequency of Citations (RFC), and Fidelity Level (FL) were also observed among the studied agro-climates. Datura stramonium (UV= 0.85; FL=90.4%; RFCs=0.8) was the most often cited species to treat livestock ailments. Bloating (ICF= 0.87) and bloody diarrhea (ICF=0.85) were the most frequent livestock ailments. The studied districts are rich in medicinal floras and concomitant ethnoveterinary knowledge, and therefore essential to implement sustainable management and conservation of these plant genetic resources. [ABSTRACT FROM AUTHOR]

• A. linearis plants lower their leaf temperatures through transpirational cooling • Low chlorophyll and high phenol could be acclimatized adaptive changes to heat • Soil quality and increasing temperatures negatively affect biomass of A. linearis • Younger plants invested more resources to ensure their protection and survival Mediterranean systems, such as in South Africa, are particularly vulnerable to the predicted increases in mean surface temperatures which will likely affect the growth and physiology of many plants and subsequently affect agricultural productivity. Aspalathus linearis (Burm.f.) R. Dahlgren (rooibos) is an important commercial, endemic crop that is produced in the Cederberg region, South Africa. This region experiences a Mediterranean-type ecosystem that is characterised by hot, dry summers (November – February) and cool, wet winters (May – August). This study assessed the effects of temperature on the growth and stress tolerant traits of A. linearis over two years. Crop biomass and selected physiological traits were determined in the field, along a temperature gradient, at four farm sites in the Cederberg during the summer and winter 2017 and summer 2018. Aspalathus linearis plants showed evidence of transpirational leaf cooling during summer and this, combined with lower chlorophyll and high phenolic content, could be considered acclimatized adaptive changes allowing the plants to mitigate the heating effects of elevated temperatures. Although changes in soil nutrients and increasing temperatures had a negative impact on crop biomass, the phenolic content, a measure of tea quality, did not vary with sites. This suggests that a shift in rooibos farming to cooler and wetter areas further south, for better growth and higher yields, would not compromise the quality of rooibos tea. [ABSTRACT FROM AUTHOR]

Heat and drought stresses are two abiotic factors that often occur simultaneously and are predicted to increase, consequently hampering plant growth. Response of different species to either stresses is well documented but information on the response of the same genotypes to both stresses in chickpea (Cicer arietinum L.) is limited. We aimed to determine whether previously noted heat‐stress‐tolerant genotype (Acc#7) is drought tolerant, that heat‐sensitive genotype (Acc#8) is drought sensitive, and whether intermittent moisture supply at vegetative stage would induce priming effect to later drought at flowering. At vegetative stage, plants were divided into three groups, nonstressed (watered to 75% field capacity [FC], severe water stress (moisture withholding for 14 d), and treated to 40% FC throughout the experiment (mild stress), with recovery for the severely stressed plants after which they were stressed (double stress) at flowering. Drought treatments at vegetative and flowering growth stages decreased physiological parameters and biomass accumulation in both genotypes except low water supply at 40% FC that decreased biomass in Acc#7 but not Acc#8. Double‐drought stress resulted in priming effect in Acc#7, having higher biomass, chlorophyll fluorescence, stomatal conductance (gs), net photosynthesis, and relative water content (RWC) vs. the introduction of stress only at flowering growth stage as well as in comparison with Acc#8. These results showed that both Acc#7 and Acc#8 are sensitive to drought, whereas after priming, Acc#7 is better acclimated to drought than Acc#8 associated with osmotic adjustment on leaf RWC and higher capacity to protect photosynthetic activity, making Acc#7 potentially ideal for areas associated with intermittent drought spells. [ABSTRACT FROM AUTHOR]

The land use and land cover (LULC) changes driven by the growing demands of mankind have a considerable effect on ecosystem services and functions. The study was carried out in the north-eastern highlands of Ethiopia to (1) analyze the effect of LULC changes between 1984 and 2021 and (2) assess the spatiotemporal variations in ecosystem service values (ESVs) and elasticity in response to LULC changes. Using Landsat imageries from 1984 to 2021, the spatiotemporal changes in LULC were evaluated with supervised image classification using maximum likelihood algorithm in ArcGIS software. Six LULC types were subsequently categorized, with overall accuracy and Kappa coefficients above 87% and 0.87, respectively. The ESVs were then estimated based on the Benefit Value Transfer (BVT) approach employing modified conservative value coefficients. The findings revealed a significant increase in cultivated land (9759.1ha) and built-up area (10174.41ha) during the stipulated periods and a drop in other land use types. The forest loss gradually decreased from 4.1% in the second period (1991–2001) to 0.58% in the third (2001–2021), compared to the first of the 1.1% conversion rates. Similarly, the proportion of grassland and water bodies steadily reduced over the stipulated periods, by 1.15% and 2.3% per annum, respectively. The overall loss of ESVs in the study landscape was estimated to be 54.4 million US$ (67.3%), drastically decreasing from 80.3 million US$ in 1984 to 26.4 million US$ in 2021, driven by the declining area coverage of water bodies, grassland, and forestland. Regardless of the loss, the ecosystem functions of hydrological regulation (37.2, 35.0, 6.1, and 5.1 US$ ha-1yr-1), water supply (14.5, 13.6, 2.4, and 2 US$ ha-1yr-1), and food production (9.8, 10.0, 9.1, and 9.9 US$ ha-1yr-1) contributed the most to the total ESV of each year while disturbance regulation and cultural values were the least throughout the study periods. The coefficient of sensitivity (CS) analysis revealed that our estimates were relatively robust. The findings further showed that human-dominated land-uses at the expense of natural ecosystems are the primary drivers of LULC transitions and the ensuing loss of ecosystem services in the region. Thus, this calls for intensive work on more effective land use policies that encourage an integrated management approach, with a focus on safeguarding the sustainability of natural ecosystems. [ABSTRACT FROM AUTHOR]

Psoralea forbesiae C.H.Stirt., A.Bello & Muasya is a new species of Psoraleeae, Fabaceae. Psoralea forbesiae is endemic to the Swartberg Mountains and is a tall densely branched re-sprouting shrub up to 2.5 m, with bluish-green stems and with most parts covered in small crater-like glands, leaves pinnately 3-foliolate, linear-oblong, pale bluish-green, semi-conduplicate, somewhat succulent, glabrous, crowded at the end of bare branches on older stems or distributed along short branches on young shoots, petiolate. A description of P. forbesiae, together with photographs and a distribution map are presented. [ABSTRACT FROM AUTHOR]

Background and Aims While variation in genome size and chromosome numbers and their consequences are often investigated in plants, the biological relevance of variation in chromosome size remains poorly known. Here, we examine genome and mean chromosome size in the cyperid clade (families Cyperaceae, Juncaceae and Thurniaceae), which is the largest vascular plant lineage with predominantly holocentric chromosomes. Methods We measured genome size in 436 species of cyperids using flow cytometry, and augment these data with previously published datasets. We then separately compared genome and mean chromosome sizes (2C/2 n) amongst the major lineages of cyperids and analysed how these two genomic traits are associated with various environmental factors using phylogenetically informed methods. Key Results We show that cyperids have the smallest mean chromosome sizes recorded in seed plants, with a large divergence between the smallest and largest values. We found that cyperid species with smaller chromosomes have larger geographical distributions and that there is a strong inverse association between mean chromosome size and number across this lineage. Conclusions The distinct patterns in genome size and mean chromosome size across the cyperids might be explained by holokinetic drive. The numerous small chromosomes might function to increase genetic diversity in this lineage where crossovers are limited during meiosis. [ABSTRACT FROM AUTHOR]

Psoraleeae consist of c. 228 species in ten genera, distributed worldwide but mostly in the temperate biome. Here, we reconstruct the phylogenetic history of Psoraleeae using eight molecular markers (rpl32-trnL , trnQ-rps16 , trnS-trnG , matK , rbcLa , rpoB-trnC , trnL-trnF and ITS) to test the monophyly and previous hypotheses on generic relationships and to reconstruct the biogeographical history (distribution pattern, potential ancestral area and biome). The monophyly of Psoraleeae is supported. The African Otholobium and Psoralea form a strongly supported clade that is sister to the rest of Psoraleeae. However, Otholobium is not monophyletic; the American taxa of the genus are resolved as closer to Bituminaria , whereas Psoralea is a clade derived from within African Otholobium. South African Otholobium is subsumed into Psoralea , the latter having priority, with a synopsis of species level nomenclature provided here. An expanded sampling of Cullen reveals three clades comprising Mediterranean (Cullen americanum), African (Cullen obtusifolium and Cullen biflorum) and Eurasian (Cullen corylifolium and Cullen drupaceum) taxa, whereas Australian Cullen are a derived clade (BS = 95%, PP = 1.00). Biogeographic reconstructions show that Psoraleeae probably originated in the Mediterranean south biome of Africa in the Late Miocene, c. 8.2 Mya, and then dispersed into the succulent biome of the Americas, Mediterranean north biome, temperate grasslands of Africa and Australia to the temperate forest of Eurasia. Climate changes in the Late Miocene, changes induced by ocean currents during the Quaternary and environmental heterogeneity are proposed as the major drivers of speciation in Psoraleeae. [ABSTRACT FROM AUTHOR]

The rapid growth rate of human population, along with the public health crisis encountered in many regions, particularly in developing world, creates an urgent need for the discovery of alternative drugs. Because medicinal plants are not distributed randomly across lineages, it has been suggested that phylogeny along with traditional knowledge of plant uses can guide the identification of new medicinally useful plants. In this study, we combined different statistical approaches to test for phylogenetic signal in 33 categories of plant uses in South Africa. Depending on the null models considered, we found evidence for signal in up to 45% of plant use categories, indicating the need for multiple tests combination to maximize the chance of discovering new medicinal plants when applying a phylogenetic comparative approach. Furthermore, although there was no signal in the diversity of medicinal uses-that is, total number of medicinal uses recorded for each plant-our results indicate that taxa that are evolutionarily closely related have significantly more uses than those that are evolutionarily isolated. Our study therefore provides additional support to the body of the literature that advocates for the inclusion of phylogeny in bioscreening medicinal flora for the discovery of alternative medicines. [ABSTRACT FROM AUTHOR]

Background: The Coronavirus (COVID-19) is a global pandemic caused by SARS-CoV-2, which has an enormous effect on human lives and the global environment. This review aimed to assess the global scientific evidence on the impact of COVID-19 lockdown on natural resources using international databases and search engines. Thus, the unprecedented anthropause due to COVID-19 has positive and negative effects on natural resources. Main body: This review showed that the unprecedented pandemic lockdown events brought a negative impact on the physical environment, including pollution associated with a drastic increase in person protective equipment, deforestation, illegal poaching and logging, overfishing, disruption of the conservation program and projects. It is noted that the spread of pandemic diseases could be aggravated by environmental pollution and a rapid increase in the global population. Despite these negative impacts of COVID-19, the anthropause appear to have also several positive effects on natural resources such as short term reduction of indoor and outdoor environmental pollutants (PM2.5, PM10, NO2, SO2, CO, and CO2), reduction in noise pollutions from ships, boats, vehicles, and planes which have positive effects on aquatic ecosystems, water quality, birds behaviour, wildlife biodiversity, and ecosystem restoration. Conclusion: Therefore, governments and scientific communities across the globe have called for a green recovery to COVID-19 and implement multi-actor interventions and environmentally friendly technologies to improve and safeguard sustainable environmental and biodiversity management and halt the next pandemic. [ABSTRACT FROM AUTHOR]

Interrogative proteome analyses are used to identify and quantify the expression of proteins involved in heat tolerance and to identify associated physiological processes in heat-stressed plants. The objectives of the study were to identify and quantify the expression of proteins involved in heat tolerance and to identify associated physiological processes in chickpea (Cicer arietinum L.) heat-tolerant (Acc#7) and sensitive genotype (Acc#8) from a field study. Proteomic and gene ontological analyses showed an upregulation in proteins related to protein synthesis, intracellular traffic, defence and transport in the heat-tolerant genotype compared to the susceptible one at the warmer site. Results from KEGG analyses indicate the involvement of probable sucrose-phosphate synthase (EC 2.4.1.14) and sucrose-phosphate phosphatase (EC 3.1.3.24) proteins, that were upregulated in the heat-tolerant genotype at the warmer site, in the starch and sucrose pathway. The presence of these differentially regulated proteins including HSP70, ribulose bisphosphate carboxylase/oxygenase activase, plastocyanin and protoporphyrinogen oxidase suggests their potential role in heat tolerance, at flowering growth stage, in field-grown chickpea. This observation supports unaltered physiological and biochemical performance of the heat-tolerant genotypes (Acc#7) relative to the susceptible genotype (Acc#8) in related studies (Makonya et al. 2019). Characterisation of the candidate proteins identified in the current study as well as their specific roles in the tolerance to heat stress in chickpea are integral to further crop improvement initiatives. Increased frequency and duration of high temperatures continues to limit crop development. An analysis of chickpea proteome to help uncover proteins and enzymes contributing to its heat tolerance and associated physiological processes is essential. Proteins related to protein synthesis, intracellular traffic, transport and defence were upregulated in heat-tolerant genotypes consistent with their previously unaltered physiological and biochemical performance. Identified candidate proteins and their specific roles in the tolerance to heat stress in chickpea are integral to further crop improvement initiatives. [ABSTRACT FROM AUTHOR]

In this study, Indigofera wenholdiae, a new species of Fabaceae from the Agulhas Plain Region of the Western Cape Province, South Africa, is described. A composite photographic plate is included along with a distribution map, description of habitat and ecology and proposed IUCN conservation status. Indigofera wenholdiae is unique in the I. brachystachya group by having digitately compound (vs. pinnately compound) leaves, white and unscented flowers (vs. pink and sweetly scented flowers) and grows on sandstone hillsides (vs. coastal limestone plains and outcrops). [ABSTRACT FROM AUTHOR]

Cyperaceae (sedges) are the third largest monocot family and are of considerable economic and ecological importance. Sedges represent an ideal model family to study evolutionary biology due to their species richness, global distribution, large discrepancies in lineage diversity, broad range of ecological preferences, and adaptations including multiple origins of C4 photosynthesis and holocentric chromosomes. Goetghebeur′s seminal work on Cyperaceae published in 1998 provided the most recent complete classification at tribal and generic level, based on a morphological study of Cyperaceae inflorescence, spikelet, flower, and embryo characters, plus anatomical and other information. Since then, several family‐level molecular phylogenetic studies using Sanger sequence data have been published. Here, more than 20 years after the last comprehensive classification of the family, we present the first family‐wide phylogenomic study of Cyperaceae based on targeted sequencing using the Angiosperms353 probe kit sampling 311 accessions. In addition, 62 accessions available from GenBank were mined for overlapping reads and included in the phylogenomic analyses. Informed by this backbone phylogeny, a new classification for the family at the tribal, subtribal, and generic levels is proposed. The majority of previously recognized suprageneric groups are supported, and for the first time, we establish support for tribe Cryptangieae as a clade including the genus Koyamaea. We provide a taxonomic treatment including identification keys and diagnoses for the 2 subfamilies, 24 tribes, and 10 subtribes, and basic information on the 95 genera. The classification includes five new subtribes in tribe Schoeneae: Anthelepidinae, Caustiinae, Gymnoschoeninae, Lepidospermatinae, and Oreobolinae. [ABSTRACT FROM AUTHOR]

The predominantly austral genus Schoenus L. is the largest genus in tribe Schoeneae and one of the ten most species‐rich Cyperaceae genera, with over 150 accepted species found mostly in Australia, New Zealand, southeast Asia, and southern Africa. Here, we use data based on two nuclear and three plastid DNA regions to present one of the most comprehensive phylogenetic reconstructions of a genus in Cyperaceae to date, covering over 70% of described species of Schoenus. After recent taxonomic realignments in the last 4 years have both added and removed species from the genus, we show that Schoenus is now monophyletic. In addition, our results indicate that Schoenus originated in Western Australia in the Paleocene and eventually dispersed to surrounding continents, but rarely back. The diversification rate of the genus appears to have slightly decreased over time, and there has not been an increase associated with the establishment of the Cape clade endemic to the sclerophyllous fynbos vegetation type, such as has been reported in other plant lineages endemic to the Cape region. These results will serve as a template to understanding the complex patterns of genome size evolution and to untangle drivers of diversification in this genus. [ABSTRACT FROM AUTHOR]

Morphological characterizations of genera in Cyperaceae tribe Abildgaardieae have been highly problematic and the subject of much debate. Earlier molecular phylogenetic studies based on Sanger sequencing and a limited sampling have indicated that several generic circumscriptions are not monophyletic. Here, we provide the first phylogenetic hypothesis for Abildgaardieae using targeted sequencing data obtained with the Angiosperms353 enrichment panel for 50 species. We test whether recent taxonomic decisions made based on Sanger sequencing data are validated by our targeted sequencing data. Our results support subsuming the small African genus Nemum into the large genus Bulbostylis and subsuming the monotypic genus Crosslandia into the diverse genus Fimbristylis. Also, our results support the recent publication of the new genus Zulustylis for two African species previously placed in Fimbristylis. Furthermore, we investigate the phylogenetic placement of recently described tropical Australian endemic species of Actinoschoenus , which are recognized here as the new morphologically cryptic genus Scleroschoenus. Based on our phylogenetic hypothesis and supported by morphological data, we recognize the genus Abildgaardia. The placement in Abildgaardieae of two monotypic genera Nelmesia and Trichoschoenus , only known from the type collections from the Democratic Republic of Congo and Madagascar, respectively, are also discussed. New combinations and lectotypifications are made in Abildgaardia , Actinoschoenus , Arthrostylis and Scleroschoenus. [ABSTRACT FROM AUTHOR]

Unprecedented changes in the Earth's biota are prompting urgent efforts to describe and conserve plant diversity. For centuries, botanical monographs — comprehensive systematic treatments of a family or genus — have been the gold standard for disseminating scientific information to accelerate research. The lack of a monograph compounds the risk that undiscovered species become extinct before they can be studied and conserved. Progress towards estimating the Tree of Life and digital information resources now bring even the most ambitious monographs within reach. Here, we recommend best practices to complete monographs urgently, especially for tropical plant groups under imminent threat or with expected socioeconomic benefits. We also highlight the renewed relevance and potential impact of monographies for the understanding, sustainable use, and conservation of biodiversity. Botanical monographs have been the gold standard for communicating comprehensive systematic information about plants for over 300 years. Monographs catalyse species discovery, biodiversity documentation and conservation, and facilitate downstream research on wild and cultivated plant species. Increased availability of DNA sequence data and digitised resources now provide powerful resources for a new phase of collaborative efforts in monography, focussed on tackling the largest, most threatened, ecologically important, and economically valuable plant groups in an efficient manner. [ABSTRACT FROM AUTHOR]

The phenomenon of sharp boundaries between distinctive vegetation types occurring under the same climatic conditions has often been interpreted by plant ecologists to characterise alternative stable states (ASS). The phenomenon may be relevant in explaining two strikingly different vegetation formations (broad‐leaved nonspiny Combretum and fine‐leaved spiny Acacia) co‐occurring in mesic savannah of southeastern Kenya. We hypothesise that the two vegetation within southeastern Kenya ecosystems represent ASS whose transition may be a response to soil characteristics switch. To explore our hypothesis, we analysed empirical field data of woody species and soil characteristics from 57 plots that included 25 from Combretum and 32 from Acacia vegetation formations. We compared floristic composition and soil characteristics between the two systems and correlated edaphic statuses and vegetation states. We encountered 2,749 woody plant individuals, representing 115 species, 87 genera and 40 families. We found that the two vegetation had discrete woody species composition and soil characteristics, and also a significant species–edaphic association. The results are consistent with the ASS theory demonstrating that soil characteristics are among the important micro‐environmental filters driving and maintaining woody vegetation mosaics in the tropics. Importantly, understanding ASS has ramifications for sustainable utilisation of woody plant resources in East African savannahs. [ABSTRACT FROM AUTHOR]

Background and Aims The idea that genome (size) evolution in eukaryotes could be driven by environmental factors is still vigorously debated. In extant plants, genome size correlates positively with stomatal size, leading to the idea that conditions enabling the existence of large stomata in fossil plants also supported growth of their genome size. We test this inductive assumption in drought-adapted, prostrate-leaved Cape (South Africa) geophytes where, compared with their upright-leaved geophytic ancestors, stomata develop in a favourably humid microclimate formed underneath their leaves. Methods Stomatal parameters (leaf cuticle imprints) and genome size (flow cytometry) were measured in 16 closely related geophytic species pairs from seven plant families. In each pair, representing a different genus, we contrasted a prostrate-leaved species with its upright-leaved phylogenetic relative, the latter whose stomata are exposed to the ambient arid climate. Key Results Except for one, all prostrate-leaves species had larger stomata, and in 13 of 16 pairs they also had larger genomes than their upright-leaved relatives. Stomatal density and theoretical maximum conductance were less in prostrate-leaved species with small guard cells (<1 pL) but showed no systematic difference in species pairs with larger guard cells (>1 pL). Giant stomata were observed in the prostrate-leaved Satyrium bicorne (89–137 µm long), despite its relatively small genome (2C = 9 Gbp). Conclusions Our results imply that climate, through selection on stomatal size, might be able to drive genome size evolution in plants. The data support the idea that plants from 'greenhouse' geological periods with large stomata might have generally had larger genome sizes when compared with extant plants, though this might not have been solely due to higher atmospheric CO2 in these periods but could also have been due to humid conditions prevailing at fossil deposit sites. [ABSTRACT FROM AUTHOR]

Ideas on hominin evolution have long invoked the emergence from forests into open habitats as generating selection for traits such as bipedalism and dietary shifts. Though controversial, the savanna hypothesis continues to motivate research into the palaeo-environments of Africa. Reconstruction of these ancient environments has depended heavily on carbon isotopic analysis of fossil bones and palaeosols. The sparsity of the fossil record, however, imposes a limit to the strength of inference that can be drawn from such data. Time-calibrated phylogenies offer an additional tool for dating the spread of savanna habitat. Here, using the evolutionary ages of African savanna trees, we suggest an initial tropical or subtropical expansion of savanna between 10 and 15 Ma, which then extended to higher latitudes, reaching southern Africa ca. 3 Ma. Our phylogenetic estimates of the origin and latitudinal spread of savannas broadly correspond with isotopic age estimates and encompass the entire hominin fossil record. Our results are consistent with the savanna hypothesis of early hominin evolution and reignite the debate on the drivers of savanna expansion. Our analysis demonstrates the utility of phylogenetic proxies for dating major ecological transitions in geological time, especially in regions where fossils are rare or absent or occur in discontinuous sediments. [ABSTRACT FROM AUTHOR]

Eriocaulon is a genus of c. 470 aquatic and wetland species of the monocot plant family Eriocaulaceae. It is widely distributed in Africa, Asia and America, with centres of species richness in the tropics. Most species of Eriocaulon grow in wetlands although some inhabit shallow rivers and streams with an apparent adaptive morphology of elongated submerged stems. In a previous molecular phylogenetic hypothesis, Eriocaulon was recovered as sister of the African endemic genus Mesanthemum. Several regional infrageneric classifications have been proposed for Eriocaulon. This study aims to critically assess the existing infrageneric classifications through phylogenetic reconstruction of infrageneric relationships, based on DNA sequence data of four chloroplast markers and one nuclear marker. There is little congruence between our molecular results and previous morphology-based infrageneric classifications. However, some similarities can be found, including Fyson's sect. Leucantherae and Zhang's sect. Apoda. Further phylogenetic studies, particularly focusing on less well sampled regions such as the Neotropics, will help provide a more global overview of the relationships in Eriocaulon and may enable suggesting the first global infrageneric classification. [ABSTRACT FROM AUTHOR]

The rapid loss of biodiversity, coupled with difficulties in species identification, call for innovative approaches to assess biodiversity. Insects make up a substantial proportion of extant diversity and play fundamental roles in any given ecosystem. To complement morphological species identification, new techniques such as metabarcoding make it possible to quantify insect diversity and insect–ecosystem interactions through DNA sequencing. Here we examine the potential of bulk insect samples (i.e., containing many non-sorted specimens) to assess prokaryote and eukaryote biodiversity and to complement the taxonomic coverage of soil samples. We sampled 25 sites on three continents and in various ecosystems, collecting insects with SLAM traps (Brazil) and Malaise traps (South Africa and Sweden). We then compared our diversity estimates with the results obtained with biodiversity data from soil samples from the same localities. We found a largely different taxonomic composition between the soil and insect samples, testifying to the potential of bulk insect samples to complement soil samples. Finally, we found that non-destructive DNA extraction protocols, which preserve insect specimens for morphological studies, constitute a promising choice for cost-effective biodiversity assessments. We propose that the sampling and sequencing of insect samples should become a standard complement for biodiversity studies based on environmental DNA. [ABSTRACT FROM AUTHOR]

Summary: Most metal hyperaccumulating plants accumulate nickel, yet the molecular basis of Ni hyperaccumulation is not well understood. We chose Senecio coronatus to investigate this phenomenon as this species displays marked variation in shoot Ni content across ultramafic outcrops in the Barberton Greenstone Belt (South Africa), thus allowing an intraspecific comparative approach to be employed. No correlation between soil and shoot Ni contents was observed, suggesting that this variation has a genetic rather than environmental basis. This was confirmed by our observation that the accumulation phenotype of plants from two hyperaccumulator and two non‐accumulator populations was maintained when the plants were grown on a soil mix from these four sites for 12 months. We analysed the genetic variation among 12 serpentine populations of S. coronatus, and used RNA‐seq for de novo transcriptome assembly and analysis of gene expression in hyperaccumulator versus non‐accumulator populations. Genetic analysis revealed the presence of hyperaccumulators in two well supported evolutionary lineages, indicating that Ni hyperaccumulation may have evolved more than once in this species. RNA‐Seq analysis indicated that putative homologues of transporters associated with root iron uptake in plants are expressed at elevated levels in roots and shoots of hyperaccumulating populations of S. coronatus from both evolutionary lineages. We hypothesise that Ni hyperaccumulation in S. coronatus may have evolved through recruitment of these transporters, which play a role in the iron‐deficiency response in other plant species. [ABSTRACT FROM AUTHOR]

We investigated the monophyly of Costularia (25 species), a genus of tribe Schoeneae (Cyperaceae) that illustrates a remarkable distribution pattern from southeastern Africa, over Madagascar, the Mascarenes and Seychelles, to Malesia and New Caledonia. A further species, Tetraria borneensis , has been suggested to belong to Costularia . Relationships and divergence times were inferred using an existing four marker phylogeny of Cyperaceae tribe Schoeneae expanded with newly generated sequence data mainly for Costularia s.l. species. Phylogenetic reconstruction was executed using Bayesian inference and maximum likelihood approaches. Divergence times were estimated using a relaxed molecular clock model, calibrated with fossil data. Based on our results, Tetraria borneensis is not related to the species of Costularia . Costularia s.l. is composed of four distinct evolutionary lineages. Two lineages, one including the type species, are part of the Oreobolus clade, i.e. a much reduced genus Costularia restricted to southeastern Africa, Madagascar, the Mascarenes and Seychelles, and a small endemic genus from New Caledonia for which a new genus Chamaedendron is erected based on Costularia subgenus Chamaedendron . The other two lineages are part of the Tricostularia clade, i.e. a separate single-species lineage from the Seychelles for which a new genus ( Xyroschoenus ) is described, and Costularia subgenus Lophoschoenus . For the latter, more research is needed to test whether they are congeneric with the species placed in the reticulate-sheathed Tetraria clade. [ABSTRACT FROM AUTHOR]