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26 results on '"Mostaguir, Khaled"'

1. International registry of congenital porto-systemic shunts: a multi-centre, retrospective and prospective registry of neonates, children and adults with congenital porto-systemic shunts

Author

Korff, Simona, Mostaguir, Khaled, Beghetti, Maurice, D’Antiga, Lorenzo, Debray, Dominique, Franchi-Abella, Stéphanie, Gonzales, Emmanuel, Guerin, Florent, Hachulla, Anne-Lise, Lambert, Virginie, Makrythanasis, Periklis, Roduit, Nicolas, Savale, Laurent, Senat, Marie-Victoire, Spaltenstein, Joël, van Steenbeek, Frank, Wildhaber, Barbara E., Zwahlen, Marcel, and McLin, Valérie A.

Published
2022
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2. Predictors of Occurrence and Anatomic Distribution of Multiple Aneurysms in Patients with Aneurysmal Subarachnoid Hemorrhage

Author

Fandino, Javier, Colluccia, Daniel, Arrighi, Marta, Venier, Alice, Kuhlen, Dominique E., Robert, Thomas, Reinert, Michael, Weyerbrock, Astrid, Hlavica, Martin, Fournier, Jean-Yves, Raabe, Andreas, Beck, Juergen, Bervini, David, Schaller, Karl, Daniel, Roy T., Starnoni, Daniele, Messerer, Mahmoud, Levivier, Marc, Keller, Emanuela, Regli, Luca, Bozinov, Oliver, Finkenstaedt, Sina, Remonda, Luca, Stippich, Christoph, Gralla, Jan, Kulcsar, Zsolt, Mendes-Pereira, Vitor, Ahlborn, Peter, Smoll, Nicolas R., Rohde, Veit, Tok, Sina, Baumann, Fabian, Kothbauer, Karl, Kerkeni, Hassen, Dan-Ura, Hiroki, Landolt, Hans, Mostaguir, Khaled, Gasche, Yvan, Sarrafzadeh, Asita, Hildebrandt, Gerhard, Winkler, Kerstin, Woernle, Christoph, Bernays, Rene, Roethlisberger, Michel, Achermann, Rita, Bawarjan, Schatlo, Stienen, Martin N., Fung, Christian, D'Alonzo, Donato, Maldaner, Nicolai, Ferrari, Andrea, Corniola, Marco V., Schöni, Daniel, Valsecchi, Daniele, Maduri, Rodolfo, Seule, Martin A., Burkhardt, Jan-Karl, Marbacher, Serge, Bijlenga, Philippe, Blackham, Kristine A., Bucher, Heiner C., Mariani, Luigi, Guzman, Raphael, and Zumofen, Daniel W.

Published
2018
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4. Incidence and Outcome of Aneurysmal Subarachnoid Hemorrhage: The Swiss Study on Subarachnoid Hemorrhage (Swiss SOS)

Author

Schatlo, Bawarjan, Fung, Christian, Stienen, Martin N., Fathi, Ali R., Fandino, Javier, Smoll, Nicolas R., Zumofen, Daniel, Daniel, Roy Thomas, Burkhardt, Jan-Karl, Bervini, David, Marbacher, Serge, Reinert, Michael, D´Alonzo, Donato, Ahlborn, Peter, Mendes Pereira, Vitor, Roethlisberger, Michel, Seule, Martin, Kerkeni, Hassen, Remonda, Luca, Weyerbrock, Astrid, Woernle, Kerstin, Venier, Alice, Perren, Fabienne, Sailer, Martin, Robert, Thomas, Rohde, Veit, Schöni, Daniel, Goldberg, Johannes, Nevzati, Edin, Diepers, Michael, Gralla, Jan, Z’Graggen, Werner, Starnoni, Daniele, Woernle, Christoph, Maldaner, Nicolai, Kulcsar, Zsolt, Mostaguir, Khaled, Maduri, Rodolfo, Eisenring, Christian, Bernays, René, Ferrari, Andrea, Dan-Ura, Hiroki, Finkenstädt, Sina, Gasche, Yvan, Sarrafzadeh, Asita, Jakob, Stephan M., Corniola, Marco, Baumann, Fabian, Regli, Luca, Levivier, Marc, Hildebrandt, Gerhard, Landolt, Hans, Mariani, Luigi, Guzman, Raphael, Beck, Jürgen, Raabe, Andreas, Keller, Emanuela, Bijlenga, Philippe, and Schaller, Karl

Published
2021
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7. International registry of congenital porto-systemic shunts: a multi-centre, retrospective and prospective registry of neonates, children and adults with congenital porto-systemic shunts

Author

Interne geneeskunde GD, CS_Genetics, Korff, Simona, Mostaguir, Khaled, Beghetti, Maurice, D'Antiga, Lorenzo, Debray, Dominique, Franchi-Abella, Stéphanie, Gonzales, Emmanuel, Guerin, Florent, Hachulla, Anne-Lise, Lambert, Virginie, Makrythanasis, Periklis, Roduit, Nicolas, Savale, Laurent, Senat, Marie-Victoire, Spaltenstein, Joël, van Steenbeek, Frank, Wildhaber, Barbara E, Zwahlen, Marcel, McLin, Valérie A, Interne geneeskunde GD, CS_Genetics, Korff, Simona, Mostaguir, Khaled, Beghetti, Maurice, D'Antiga, Lorenzo, Debray, Dominique, Franchi-Abella, Stéphanie, Gonzales, Emmanuel, Guerin, Florent, Hachulla, Anne-Lise, Lambert, Virginie, Makrythanasis, Periklis, Roduit, Nicolas, Savale, Laurent, Senat, Marie-Victoire, Spaltenstein, Joël, van Steenbeek, Frank, Wildhaber, Barbara E, Zwahlen, Marcel, and McLin, Valérie A

Published
2022

8. International registry of congenital porto-systemic shunts A multi-centre, retrospective and prospective registry of neonates, children and adults with congenital porto-systemic shunts

Author

KORFF, Simona, primary, Mostaguir, Khaled, additional, Beghetti, Maurice, additional, D’Antiga, Lorenzo, additional, Debray, Dominique, additional, Franchi-Abella, Stéphanie, additional, Gonzales, Emmanuel, additional, Guerin, Florent, additional, Hachulla, Anne-Lise, additional, Lambert, Virginie, additional, Makrythanasis, Periklis, additional, Roduit, Nicolas, additional, Savale, Laurent, additional, Senat, Marie-Victoire, additional, Spaltenstein, Joël, additional, Steenbeek, Frank van, additional, Wildhaber, Barbara E., additional, Zwahlen, Marcel, additional, and McLin, Valérie A., additional

Published
2022
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9. Additional file 1 of International registry of congenital porto-systemic shunts: a multi-centre, retrospective and prospective registry of neonates, children and adults with congenital porto-systemic shunts

Author

Korff, Simona, Mostaguir, Khaled, Beghetti, Maurice, D’Antiga, Lorenzo, Debray, Dominique, Franchi-Abella, Stéphanie, Gonzales, Emmanuel, Guerin, Florent, Hachulla, Anne-Lise, Lambert, Virginie, Makrythanasis, Periklis, Roduit, Nicolas, Savale, Laurent, Senat, Marie-Victoire, Spaltenstein, Joël, van Steenbeek, Frank, Wildhaber, Barbara E., Zwahlen, Marcel, and McLin, Valérie A.

Abstract

Additional file 1. Supplementary Figure. UML presentation: package/class & use case diagram - relationships: 0..1 no instance or 1 instance, 0..* zero or more instance, 1..* at least one instance Purple: visits over time Yellow: clinical forms and imaging Green: specific forms at the Basic Data & Diagnosis visit Red: specific forms at closure Grey: Specific forms at any time-point.

Published
2022
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10. Clinical Data Management System (CDMS) Evaluation

Author

Bochud, Yves, primary, Huf, Christina, additional, Helmers, Muriel, additional, Wright, Patrick R., additional, Saccilotto, Ramon, additional, Mostaguir, Khaled, additional, Fares, Fady, additional, and Lengwiler, Daniel, additional

Published
2021
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12. Predictors of Occurrence and Anatomic Distribution of Multiple Aneurysms in Patients with Aneurysmal Subarachnoid Hemorrhage

Author

Roethlisberger, Michel, primary, Achermann, Rita, additional, Bawarjan, Schatlo, additional, Stienen, Martin N., additional, Fung, Christian, additional, D'Alonzo, Donato, additional, Maldaner, Nicolai, additional, Ferrari, Andrea, additional, Corniola, Marco V., additional, Schöni, Daniel, additional, Valsecchi, Daniele, additional, Maduri, Rodolfo, additional, Seule, Martin A., additional, Burkhardt, Jan-Karl, additional, Marbacher, Serge, additional, Bijlenga, Philippe, additional, Blackham, Kristine A., additional, Bucher, Heiner C., additional, Mariani, Luigi, additional, Guzman, Raphael, additional, Zumofen, Daniel W., additional, Fandino, Javier, additional, Colluccia, Daniel, additional, Arrighi, Marta, additional, Venier, Alice, additional, Kuhlen, Dominique E., additional, Robert, Thomas, additional, Reinert, Michael, additional, Weyerbrock, Astrid, additional, Hlavica, Martin, additional, Fournier, Jean-Yves, additional, Raabe, Andreas, additional, Beck, Juergen, additional, Bervini, David, additional, Schaller, Karl, additional, Daniel, Roy T., additional, Starnoni, Daniele, additional, Messerer, Mahmoud, additional, Levivier, Marc, additional, Keller, Emanuela, additional, Regli, Luca, additional, Bozinov, Oliver, additional, Finkenstaedt, Sina, additional, Remonda, Luca, additional, Stippich, Christoph, additional, Gralla, Jan, additional, Kulcsar, Zsolt, additional, Mendes-Pereira, Vitor, additional, Ahlborn, Peter, additional, Smoll, Nicolas R., additional, Rohde, Veit, additional, Tok, Sina, additional, Baumann, Fabian, additional, Kothbauer, Karl, additional, Kerkeni, Hassen, additional, Dan-Ura, Hiroki, additional, Landolt, Hans, additional, Mostaguir, Khaled, additional, Gasche, Yvan, additional, Sarrafzadeh, Asita, additional, Hildebrandt, Gerhard, additional, Winkler, Kerstin, additional, Woernle, Christoph, additional, and Bernays, Rene, additional

Published
2018
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14. ExPASy: SIB bioinformatics resource portal

Author

Artimo, Panu, Jonnalagedda, Manohar, Arnold, Konstantin, Baratin, Delphine, Csardi, Gabor, de Castro, Edouard, Duvaud, Séverine, Flegel, Volker, Fortier, Arnaud, Gasteiger, Elisabeth, Grosdidier, Aurélien, Hernandez, Céline, Ioannidis, Vassilios, Kuznetsov, Dmitry, Liechti, Robin, Moretti, Sébastien, Mostaguir, Khaled, Redaschi, Nicole, Rossier, Grégoire, Xenarios, Ioannis, Stockinger, Heinz, Artimo, Panu, Jonnalagedda, Manohar, Arnold, Konstantin, Baratin, Delphine, Csardi, Gabor, de Castro, Edouard, Duvaud, Séverine, Flegel, Volker, Fortier, Arnaud, Gasteiger, Elisabeth, Grosdidier, Aurélien, Hernandez, Céline, Ioannidis, Vassilios, Kuznetsov, Dmitry, Liechti, Robin, Moretti, Sébastien, Mostaguir, Khaled, Redaschi, Nicole, Rossier, Grégoire, Xenarios, Ioannis, and Stockinger, Heinz

Abstract

ExPASy (http://www.expasy.org) has worldwide reputation as one of the main bioinformatics resources for proteomics. It has now evolved, becoming an extensible and integrative portal accessing many scientific resources, databases and software tools in different areas of life sciences. Scientists can henceforth access seamlessly a wide range of resources in many different domains, such as proteomics, genomics, phylogeny/evolution, systems biology, population genetics, transcriptomics, etc. The individual resources (databases, web-based and downloadable software tools) are hosted in a ‘decentralized' way by different groups of the SIB Swiss Institute of Bioinformatics and partner institutions. Specifically, a single web portal provides a common entry point to a wide range of resources developed and operated by different SIB groups and external institutions. The portal features a search function across ‘selected' resources. Additionally, the availability and usage of resources are monitored. The portal is aimed for both expert users and people who are not familiar with a specific domain in life sciences. The new web interface provides, in particular, visual guidance for newcomers to ExPASy

Published
2017

15. Continuous Automated Model EvaluatiOn (CAMEO) complementing the critical assessment of structure prediction in CASP12.

Author

Haas, Jürgen, Barbato, Alessandro, Behringer, Dario, Studer, Gabriel, Roth, Steven, Bertoni, Martino, Mostaguir, Khaled, Gumienny, Rafal, and Schwede, Torsten

Abstract

Abstract: Every second year, the community experiment “Critical Assessment of Techniques for Structure Prediction” (CASP) is conducting an independent blind assessment of structure prediction methods, providing a framework for comparing the performance of different approaches and discussing the latest developments in the field. Yet, developers of automated computational modeling methods clearly benefit from more frequent evaluations based on larger sets of data. The “Continuous Automated Model EvaluatiOn (CAMEO)” platform complements the CASP experiment by conducting fully automated blind prediction assessments based on the weekly pre‐release of sequences of those structures, which are going to be published in the next release of the PDB Protein Data Bank. CAMEO publishes weekly benchmarking results based on models collected during a 4‐day prediction window, on average assessing ca. 100 targets during a time frame of 5 weeks. CAMEO benchmarking data is generated consistently for all participating methods at the same point in time, enabling developers to benchmark and cross‐validate their method's performance, and directly refer to the benchmarking results in publications. In order to facilitate server development and promote shorter release cycles, CAMEO sends weekly email with submission statistics and low performance warnings. Many participants of CASP have successfully employed CAMEO when preparing their methods for upcoming community experiments. CAMEO offers a variety of scores to allow benchmarking diverse aspects of structure prediction methods. By introducing new scoring schemes, CAMEO facilitates new development in areas of active research, for example, modeling quaternary structure, complexes, or ligand binding sites. [ABSTRACT FROM AUTHOR]

Published
2018
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18. A suite of tools to analyse and publish 2‐DE data

Author

Hoogland, Christine, primary, Walther, Daniel, additional, Palagi, Patricia M., additional, Bouchet, Gérard, additional, Mostaguir, Khaled, additional, Robin, Xavier, additional, Appel, Ron D., additional, and Lisacek, Frédérique, additional

Published
2008
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19. SWISS-2DPAGE, ten years later

Author

Hoogland, Christine, primary, Mostaguir, Khaled, additional, Sanchez, Jean-Charles, additional, Hochstrasser, Denis F., additional, and Appel, Ron D., additional

Published
2004
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21. 2D PAGE Databases for Proteins in Human Body Fluids.

Author

Thongboonkerd, Visith, Hoogland, Christine, Mostaguir, Khaled, Sanchez, Jean-Charles, Hochstrasser, Denis F., and Appel, Ron D.

Abstract

With the development of the Internet, a growing number of proteomics databases have become available. The web is a powerful tool for data integration because it links the components constituting these databases, in general gel images and protein information, while offering rapid means to navigate from one database to another. Unfortunately, with only 15 maps available as electronic resources, the human body fluids do not really benefit from this development. This chapter summarizes the state of the art of proteomics databases, with an emphasis on human body fluids. Insights into one of these databases, SWISS-2DPAGE, available for more than 10 yr now, are given to show current functionalities and usage examples. Some general thoughts are also given on how to improve sharing and publication of proteomics data through electronic media. [ABSTRACT FROM AUTHOR]

Published
2007
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22. 2-DE Databases on the World Wide Web.

Author

Walker, John M., Hoogland, Christine, Mostaguir, Khaled, and Appel, Ron D.

Abstract

With the development of the Internet, a growing number of two-dimensional gel electrophoresis (2-DE) databases become available (50 in January 2004, for a total of 270 image maps). By linking the two components constituting 2-DE databases—images and protein information—the active hypertext links provide a powerful tool for data integration, in addition to navigation from one database to another. This chapter shows how to remotely retrieve data from these databases over the Internet. [ABSTRACT FROM AUTHOR]

Published
2005
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23. ExPASy: SIB bioinformatics resource portal.

Author

Artimo, Panu, Jonnalagedda, Manohar, Arnold, Konstantin, Baratin, Delphine, Csardi, Gabor, de Castro, Edouard, Duvaud, Séverine, Flegel, Volker, Fortier, Arnaud, Gasteiger, Elisabeth, Grosdidier, Aurélien, Hernandez, Céline, Ioannidis, Vassilios, Kuznetsov, Dmitry, Liechti, Robin, Moretti, Sébastien, Mostaguir, Khaled, Redaschi, Nicole, Rossier, Grégoire, and Xenarios, Ioannis

Published
2012
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24. ExPASy: SIB bioinformatics resource portal

Author

Artimo, Panu, Jonnalagedda, Manohar, Arnold, Konstantin, Baratin, Delphine, Csardi, Gabor, de Castro, Edouard, Duvaud, Séverine, Flegel, Volker, Fortier, Arnaud, Gasteiger, Elisabeth, Grosdidier, Aurélien, Hernandez, Céline, Ioannidis, Vassilios, Kuznetsov, Dmitry, Liechti, Robin, Moretti, Sébastien, Mostaguir, Khaled, Redaschi, Nicole, Rossier, Grégoire, Xenarios, Ioannis, Stockinger, Heinz, Artimo, Panu, Jonnalagedda, Manohar, Arnold, Konstantin, Baratin, Delphine, Csardi, Gabor, de Castro, Edouard, Duvaud, Séverine, Flegel, Volker, Fortier, Arnaud, Gasteiger, Elisabeth, Grosdidier, Aurélien, Hernandez, Céline, Ioannidis, Vassilios, Kuznetsov, Dmitry, Liechti, Robin, Moretti, Sébastien, Mostaguir, Khaled, Redaschi, Nicole, Rossier, Grégoire, Xenarios, Ioannis, and Stockinger, Heinz

Abstract

ExPASy (http://www.expasy.org) has worldwide reputation as one of the main bioinformatics resources for proteomics. It has now evolved, becoming an extensible and integrative portal accessing many scientific resources, databases and software tools in different areas of life sciences. Scientists can henceforth access seamlessly a wide range of resources in many different domains, such as proteomics, genomics, phylogeny/evolution, systems biology, population genetics, transcriptomics, etc. The individual resources (databases, web-based and downloadable software tools) are hosted in a ‘decentralized' way by different groups of the SIB Swiss Institute of Bioinformatics and partner institutions. Specifically, a single web portal provides a common entry point to a wide range of resources developed and operated by different SIB groups and external institutions. The portal features a search function across ‘selected' resources. Additionally, the availability and usage of resources are monitored. The portal is aimed for both expert users and people who are not familiar with a specific domain in life sciences. The new web interface provides, in particular, visual guidance for newcomers to ExPASy

25. Predictors of Occurrence and Anatomic Distribution of Multiple Aneurysms in Patients with Aneurysmal Subarachnoid Hemorrhage

Author

Michel Roethlisberger, Rita Achermann, Schatlo Bawarjan, Martin N. Stienen, Christian Fung, Donato D'Alonzo, Nicolai Maldaner, Andrea Ferrari, Marco V. Corniola, Daniel Schöni, Daniele Valsecchi, Rodolfo Maduri, Martin A. Seule, Jan-Karl Burkhardt, Serge Marbacher, Philippe Bijlenga, Kristine A. Blackham, Heiner C. Bucher, Luigi Mariani, Raphael Guzman, Daniel W. Zumofen, Javier Fandino, Daniel Colluccia, Marta Arrighi, Alice Venier, Dominique E. Kuhlen, Thomas Robert, Michael Reinert, Astrid Weyerbrock, Martin Hlavica, Jean-Yves Fournier, Andreas Raabe, Juergen Beck, David Bervini, Karl Schaller, Roy T. Daniel, Daniele Starnoni, Mahmoud Messerer, Marc Levivier, Emanuela Keller, Luca Regli, Oliver Bozinov, Sina Finkenstaedt, Luca Remonda, Christoph Stippich, Jan Gralla, Zsolt Kulcsar, Vitor Mendes-Pereira, Peter Ahlborn, Nicolas R. Smoll, Veit Rohde, Sina Tok, Fabian Baumann, Karl Kothbauer, Hassen Kerkeni, Hiroki Dan-Ura, Hans Landolt, Khaled Mostaguir, Yvan Gasche, Asita Sarrafzadeh, Gerhard Hildebrandt, Kerstin Winkler, Christoph Woernle, Rene Bernays, University of Zurich, Zumofen, Daniel W, Robert, Thomas, Fournier, Jean-Yves, Schaller, Karl Lothard, Kulcsar, Zsolt, Baumann, Fabian, Mostaguir, Khaled, Gasche, Yvan, and Sarrafzadeh-Khorassani, Asita Simone

Subjects
Adult, Male, medicine.medical_specialty, Subarachnoid hemorrhage, 610 Medicine & health, 030218 nuclear medicine & medical imaging, Cohort Studies, 03 medical and health sciences, 0302 clinical medicine, Aneurysm, 10043 Clinic for Neuroradiology, medicine, Humans, cardiovascular diseases, Registries, Risk factor, Aged, business.industry, Retrospective cohort study, Intracranial Aneurysm, Odds ratio, Middle Aged, Subarachnoid Hemorrhage, medicine.disease, Confidence interval, ddc:616.8, 2746 Surgery, 2728 Neurology (clinical), Cohort, cardiovascular system, Aneurysm multiplicity, Surgery, Female, Neurology (clinical), Radiology, business, 030217 neurology & neurosurgery, Switzerland, Cohort study
Abstract

Background The literature on multiple intracranial aneurysms (MIA) in patients with aneurysmal subarachnoid hemorrhage (aSAH) focuses largely on risk factor analysis and consists essentially of retrospective cohort studies of limited sample size, or studies in populations outside Europe and North America. The purpose of this cohort study was to identify predictors for aneurysm multiplicity and to investigate the anatomic distribution of MIA in a representative Western cohort of patients with aSAH. Methods The Swiss Study of Subarachnoid Hemorrhage (SOS) database includes anonymized data from all tertiary neurovascular facilities in Switzerland. The dataset for 2009–2014 was used to compare characteristics of patients with aSAH and MIA and those with a single intracranial aneurysm (SIA) by means of descriptive and multivariate regression analysis. Results Among 1689 unselected patients with aSAH, 467 had MIA (prevalence, 27.6%). The location of the ruptured index aneurysm was correlated with the probability of finding bystander aneurysms and predicted their likely anatomic distribution. Patients with a ruptured basilar artery aneurysm (odds ratio [OR], 2.11; 95% confidence interval [CI], 1.30–3.44) or a ruptured middle cerebral artery aneurysm (OR, 1.86; 95% CI, 1.35–2.55) were at the greatest risk for having MIA. Larger size of the index aneurysm (OR per 1 mm, 1.03; 95% CI, 1.01–1.06) was also positively correlated with aneurysm multiplicity. Males were less likely than females to have MIA (OR, 0.79; 95% CI, 0.61–1.01). Conclusions In patients with aSAH, the location of the ruptured index aneurysm is correlated with the probability of finding bystander aneurysms, and is predictive of the sites at which bystander aneurysms are most likely to be found.

Published
2017

26. Creating 2DE databases for the World Wide Web.

Author

Hoogl C, Mostaguir K, and Appel RD

Subjects
Information Storage and Retrieval methods, Proteins analysis, Software, User-Computer Interface, Databases, Protein, Electrophoresis, Gel, Two-Dimensional, Internet
Abstract

With the development of the Internet, a growing number of two-dimensional electrophoresis (2DE) databases have become available (60 in 2009, for a total of 425 image maps). By linking the two components constituting 2DE databases, gel images and protein information, the active hypertext links provide a powerful tool for data integration, in addition to navigation from one database to another.This chapter shows how to prepare the necessary files to build a federated 2DE database in order to make it available over the Internet and how to further update it.

Published
2009
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