22 results on '"Montúfar R"'
Search Results
2. Long-term change in the lowland forests of the Yasuní National Park, western Amazon
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Spater, M., Montoya, Encarnación, Montúfar, R., Luzuriaga, C., Cañellas-Boltà, Núria, Trapote, Maria del Carmen, Smedley, R., Wolff, G., Marchant, R., Spater, M., Montoya, Encarnación, Montúfar, R., Luzuriaga, C., Cañellas-Boltà, Núria, Trapote, Maria del Carmen, Smedley, R., Wolff, G., and Marchant, R.
- Abstract
Uncertainty remains regarding the origin of the high biodiversity found within lowland forests of the Amazon Basin, particularly with regards to legacy impacts of human populations, natural disturbance and ecosystem stability. Current research is challenging the idea of Amazonian forests as untarnished, mature ecosystems, suggesting instead that a more complex patchwork of forests exists in varying stages of recovery from previous perturbations. Uncovering the source, duration and extent of past disturbance is key to understanding modern patterns of biodiversity and is vital to inform vegetation and climate modeling, and direct conservation. The Yasuní National Park, located in northeastern Ecuador, holds some of the highest levels of plant and animal diversity on the planet and is also home to several indigenous groups. Despite the ecological and cultural importance of Yasuní, few palaeoecological studies exist within the region. Here we present the pollen and charcoal analyses of a record taken from a Mauritia flexuosa palm swamp spanning the last 3400 years. While rainforest elements were constant throughout the record, a replacement of the dominant taxa Iriartea by Mauritia as well as the rise in Araceae and Euterpe occurred over the last 1500 years. We interpret this change as a transition from seasonally flooded forest to a palm swamp and suggest it was driven by shifts in local hydrology. The importance of local hydrology is further highlighted when comparing results with a nearby 6000 year old sedimentary record that exhibits a similar transition from floodplain forest to palm swamp. These cores document late Holocene forest history and river migration or flooding, which in addition to the ecological consequences, could have influenced patterns of human occupation, as human presence is evidenced in local archaeological works nearby.
- Published
- 2023
3. Productivity and management of Phytelephas aequatorialis (Arecaceae) in Ecuador
- Author
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Brokamp, G., Borgtoft Pedersen, H., Montúfar, R., Jácome, J., Weigend, M., and Balslev, H.
- Published
- 2014
- Full Text
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4. The high dynamism of Western Amazonian lowlands: a long-term view of the vegetation communities of Yasuní National Park (Ecuador)
- Author
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Montoya, Encarnación, Montúfar, R., Luzuriaga, Carmen X., and Rull, Valentí
- Subjects
Quaternary ,Tropical - Abstract
Since the first pollen diagram presented in 1916 by von Post, the study of the vegetation long-term (>50 years) dynamics through the use of palynology has spread worldwide. However, this increment in the number of analyses has been patchy, with locations densely studied and other areas with still limited knowledge, as it is the case of the tropics. For instance, South American tropics and specially the lowlands (Amazonia sensu lato), represents a region largely understudied, thus limiting obtaining accurate information of the plant communities¿ dynamics of such an ecologically and economic important area. Some of the reasons for this low density of available studies are the difficulty of arriving and exploring the study area or the finding of suitable locations. Among the problems for finding suitable records, western Amazonia has been highlighted as a very geomorphologically active location, preventing the development of long, continuous, sediments spanning several thousand years without a sedimentary gap or hiatus. Here we present a Holocene sequence of western northern Amazonian lowlands, in the Ecuadorian Yasuní National Park. The sequence (PATAM25_B16, 0º41¿07.1¿¿S-76º25¿58¿¿W, 217 m asl), spans the last 6000 years, and pollen, non-pollen palynomorphs, and charcoal analyses have been performed. The beginning of the record is characterised by the presence of some disturbance indicators such as Cecropia, and Asteraceae and Anacardiaceae. Around 5000 years ago, the forest was characterised by high abundances of Urticales, Araliaceae, Virola, Sterculia and Mimosa. Other rainforest elements became important around 3000 years ago, including Acalypha, Alchornea and Malpighiaceae. Finally, the modern forest composition was established during the last millennium, with important contributions from Hyeronima, Geonoma/Euterpe, Iriartea, Ficus, and more recently, Machaerium and Mauritia. The results show the continuous presence of a rainforest, but with a high dynamism changing the abundance of the dominant taxa several times during the last 6000 years. In this sense, the forest with a higher evenness is the present-day one, established during the last millennium. It is suggested that the changes in the vegetation were primarily driven by geomorphological activity including changes in the drainage system, as well as human occurrence, which could have been only sporadic in the study area. Today, the study site is inhabited by Waorani indigenous, and it is subjected to oil extraction activities. The high dynamism of the forest and the unidirectional trends of the taxa shown in this record highlight the importance of studying in more details the trends of the current vegetation in order to secure the present and future ecosystem services of such unique location. Project refs.: 2014 BP-B-00094 and IJCI-2015-24273.
- Published
- 2019
5. Vegetation, humans and sea-level rise interactions during the Holocene: the case of the Orinoco Delta
- Author
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Montoya, Encarnación, Pedra-Méndez, Jordi, García-Falcó, Esther, Stauffer, Fred W, Montúfar, R., Giralt, Santiago, Gómez-Paccard, Miriam, and Rull, Valentí
- Subjects
Holocene ,Orinoco - Abstract
Coastal wetlands have been proposed as highly threatened by the ongoing and future climatic change, including projected sea-level changes as an additional forcing factor compared to more inland locations. The limited knowledge generated to date in this topic has been primarily focused in those areas attaining a high population density in the present-day, and rarely deals with long-term (>50 years) dynamics. Here we present the first Holocene palaeoecological study carried in the Orinoco Delta, in NE Venezuela. The record presented here, PATAM18_A12 (9º 30’ N - 62º 41’W, 13 m bsl), contains sediments from the last 6200 years and is located in a river-shore swamp dominated by the palm Mauritia flexuosa. This palm is very abundant in the region, and forms both extensive monospecific and mixed vegetation communities along the river courses. Current human occupation is almost restricted to small settlements of the Warao indigenous culture (known as the boat people), closely related to the use of M. flexuosa (which they refer to as the “tree of life”), and other palm species present in the zone. The results show the occurrence of three well-distinguished palynological zones: (i) from 6200 to 5200 cal yr BP, characterised by mangrove and other taxa related to salinity, low (negative) values of magnetic susceptibility and magnetic grain size, absence of transported clays, and the highest macrocharcoal particles abundance; (ii) from 5200 to 2950 cal yr BP, marked by a replacement of the mangrove vegetation by a more inland mixed-swamp forest community with low levels of charcoal, and (iii) from 2950 cal yr BP to present-day, characterised by the establishment of the current vegetation community, dominated by M. flexuosa, and an increasing trend in the charcoal curve since the last 700 years. Climatic changes have been proposed as the key driver influencing the vegetation succession recorded. The stabilisation of the sea-level that occurred during the mid-Holocene would have favoured the transgression of the coastal line, with the migration of the mangrove vegetation seawards. Around 2800 years ago, the decrease of the ENSO variability registered in the close Cariaco record likely influenced the expansion of the Mauritia palm community. It is suggested that in our location, the inhabiting human populations were differently influenced by these environmental changes. First, the disappearance of the coastal resources could have favoured the land abandonment, whereas the increase in the abundance of the palm might be influential for the arrival of other inland cultures that were previously used to manage Mauritia. This sequence shows the importance of the ecosystem services for the location inhabitants, highlighting the abandonment of the mid-Holocene culture coeval with the disappearance of its ecosystem. These results also provide information about the sensitivity or resilience in facing external stressors of both humans and vegetation, and will be valuable tools for managing the future of this ecosystem. Project refs.: 2014 BP-B-00094 and IJCI-2015-24273.
- Published
- 2019
6. Evaluation of palm swamps palaeocology related to past climatic and human practices variability: The study case of the Orinoco Delta
- Author
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Montoya, Encarnación, Pedra-Méndez, J., García-Falcó, Esther, Stauffer, F.W., Montúfar, R., Giralt, Santiago, Gómez-Paccard, Miriam, and Rull, Valentí
- Abstract
PROJECT AIMS: The paucity of palaeoecological data is acute in the Neotropics, where the low number of good quality records (with reliable dating and continuous sedimentation) prevents the development of a regional understanding of the vegetation and climate dynamics. Within the Neotropics, low wetlands are particularly poorly known due to the scarcity of potential archives. We present here an ongoing project designed to improve the understanding of wetland forests' responses to changes in climatic and human variability by studying their long-term dynamics. The project will focus on specific scales for maximising the accuracy of the outputs: I) the geographic area (northern South American wetlands), and ii) the time period (last 6 kyr). The region has been chosen because of the occurrence of globally important big wetland areas dominated by the palm Mauritania flexuosa and the perceived threats to the fluvial-linked systems. Within this broad area, two specific locations have been chosen that represent the northern limit of M. flexuosa current distribution. Time frame has been selected to allow: i) the comparison between intervals with and without human activity, and ii) covering the establishment of Mauritania which will allow a better understanding of the current trends (communities in expansion or reduction). The knowledge of past interactions between wetlands, seasonality changes and human practices will provide new insights into how this poorly understood community could face future projections of climatic and land use changes. In addition, emphasis will be placed on studying what influenced the composition of modern plant communities, to analyse their sensitivity to external drivers and to identify the occurrence of irreversible tipping points or thresholds in the recent past. The research will be addressed by using a combination of indicators (proxies) of past environmental change in sedimentary sequences, including: vegetation (pollen), erosion/run-off/sedimentation (palaeomagnetism, XRD), and human impacts (non-pollen palynomorphs, charcoal particles). Funding project reference: 2014 BP-B-00094.
- Published
- 2017
7. First Report of Phytophthora palmivora Causing Bud Rot on Palmito (Bactris gasipaes) in Ecuador
- Author
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Ordoñez, M. E., primary, Jácome, D. A., additional, Keil, C. B., additional, Montúfar, R. J., additional, and Evans, T. A., additional
- Published
- 2016
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8. THU0145 Low Agreement Between Clinical Practice and Centralized Lecture Using the Sharp/Van DER Heijde Score in Patients with Early RA. Results from the Gladar Multinational Cohort
- Author
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Massardo, L., primary, PonsEstel, B., additional, Pineda, C., additional, Soriano, E., additional, Cardiel, M., additional, Galarza, C., additional, Levy, R., additional, Sacnum, M., additional, Caballero, C.V., additional, Acevedo, E., additional, Bianchi, W., additional, González, H., additional, Montúfar, R., additional, Pinto, R., additional, Ramírez, L.A., additional, and Zerbini, C., additional
- Published
- 2015
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9. Nurse-based restoration of degraded tropical forests with tussock grasses: Experimental support from the Andean cloud forest
- Author
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Anthelme, F., Gómez Aparicio, Lorena, Montúfar, R., Anthelme, F., Gómez Aparicio, Lorena, and Montúfar, R.
- Abstract
© 2014 British Ecological Society. The degradation of the Andean cloud forest raises strong biological conservation issues and threatens the sustainability of a crucial water resource. The idea that nurse-based restoration can accelerate the recovery of these forests is underexplored, despite its promise as a restoration technique. Recent conceptual models predict that facilitation among plants may be an important mechanism, but there is a lack of strong empirical support. We gathered experimental data to test this prediction and explore the relevance of using nurse-based forest restoration in these environments. A 20-month factorial experimental design in the Andean tropical cloud forest was established. We measured the survival and estimated the biomass production of transplanted seedlings of a keystone canopy forest species, Ceroxylon echinulatum (Arecaceae), in a deforested area in the presence/absence of herbivory, a potential nurse plant (the tussock grass Setaria sphacelata, Poaceae) and artificial shade. The joint effects of deforestation and herbivory led to the death of all seedlings, whereas most seedlings survived in the adjacent forest, which was used as the control. The presence of nurse plants led to significantly higher survival and growth of Ceroxylon seedlings throughout the experiment, regardless of herbivore presence. The nurse effects were explained by a reduction of the relative abiotic stress experienced by the seedlings outside the forest, that is, the consistently decreasing maximum vapour pressure deficit. Furthermore, nurse tussocks delayed and reduced the effects of herbivory by offering physical protection and a refuge for seedlings against detection by herbivores. However, the effects of herbivory and abiotic stress on facilitation were not additive. Synthesis and applications. Facilitation in degraded cloud forest can be intense as soon as the beneficiary plants are driven away from their physiological optimum (relative abiotic stress)
- Published
- 2014
10. Productivity and management ofPhytelephas aequatorialis(Arecaceae) in Ecuador
- Author
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Brokamp, G., primary, Borgtoft Pedersen, H., additional, Montúfar, R., additional, Jácome, J., additional, Weigend, M., additional, and Balslev, H., additional
- Published
- 2014
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11. Diurnal pattern of clock gene expression in the hypothalamus of the newborn rabbit
- Author
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Caldelas, I., primary, Tejadilla, D., additional, González, B., additional, Montúfar, R., additional, and Hudson, R., additional
- Published
- 2007
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12. CHARACTERIZATION OF ANTIPHOSPHOLIPID ANTIBODY SYNDROME (APS) IN EL SALVADOR
- Author
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Montúfar, R, Castellanos, C, Rodríguez, J, Aragon, R, Castillejos, G, and Rodríguez, Y
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- 2006
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13. Bactris gasipaes Kunth var. gasipaes complete plastome and phylogenetic analysis.
- Author
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Buitrago Acosta MC, Montúfar R, Guyot R, Mariac C, Tranbarger TJ, Restrepo S, and Couvreur TLP
- Abstract
Bactris gasipaes var. gasipaes (Arecaceae, Palmae) is an economically and socially important plant species for populations across tropical South and Central America. It has been domesticated from its wild variety, B. gasipaes var. chichagui , since pre-Columbian times. In this study, we sequenced the plastome of the cultivated variety, B. gasipaes Kunth var. gasipaes and compared it with the published plastome of the wild variety. The chloroplast sequence obtained was 156,580 bp. The cultivated chloroplast sequence was conserved compared to the wild type sequence with 99.8% of nucleotide identity. We did, however, identify multiple Single Nucleotide Variants (SNVs), insertions, microsatellites and a resolved region of missing nucleotides. A SNV in one of the core barcode markers ( matK ) was detected between the wild and cultivated accessions. Phylogenetic analysis was carried out across the Arecaceae family and compared to previous reports, resulting in an identical topology. This study is a step forward in understanding the genome evolution of this species., Competing Interests: No potential conflict of interest was reported by the author(s)., (© 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.)
- Published
- 2022
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14. Three Amazonian palms as underestimated and little-known sources of nutrients, bioactive compounds and edible insects.
- Author
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Jaramillo-Vivanco T, Balslev H, Montúfar R, Cámara RM, Giampieri F, Battino M, Cámara M, and Alvarez-Suarez JM
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- Animals, Fruit, Nutrients, Plant Breeding, Arecaceae, Edible Insects
- Abstract
Mauritia flexuosa, Bactris gasipaes, and Oenocarpus bataua are among the main palms in the Amazon used for food and medicinal purposes. The food most commonly derived from these are fruits, oil, and the larvae of the insect Rhynchophorus palmarum reared in their trunks. Palm fruits are used for oil extraction as they are rich in saturated fatty acids, fiber, pro-vitamin A, carotenoids, tocopherols, macro and microelements, and polyphenols. Furthermore, the larvae of R. palmarum are rich in lipids, vitamin E, and proteins. This review analyzes the chemical composition of the fruit and oil of these palm species, as well as the R. palmarum larvae that breed in them. Our aim is to present information that is not widely known in order to demonstrate the potential of these palms as sources of plant-based and animal food with high nutritional and functional values., (Copyright © 2021 Elsevier Ltd. All rights reserved.)
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- 2022
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15. Phylogenomic relationships and historical biogeography in the South American vegetable ivory palms (Phytelepheae).
- Author
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Escobar S, Helmstetter AJ, Montúfar R, Couvreur TLP, and Balslev H
- Subjects
- Brazil, Phylogeny, Phylogeography, Arecaceae genetics, Vegetables
- Abstract
The palm tribe Phytelepheae form a clade of three genera and eight species whose phylogenetic relationships and historical biogeography are not fully understood. Based on morphological similarities and phylogenetic relatedness, it has been suggested that Phytelephas seemannii and Phytelephas schottii are synonyms of Phytelephas macrocarpa, implying the existence of only six species within the Phytelepheae. In addition, uncertainty in their phylogenetic relationships in turn results in blurred biogeographic history. We inferred the phylogenomic relationships in the Phytelepheae by target-capturing 176 nuclear genes and estimated divergence times by using four fossils for time calibration. We lastly explored the biogeographic history of the tribe by inferring its ancestral range evolution. Our phylogenomic trees showed that P. seemannii and P. schottii are not closely related with P. macrocarpa, and therefore, support the existence of eight species in the Phytelepheae. The ancestor of the tribe was widely-distributed in the Chocó, Magdalena, and Amazonia during the Miocene at 19.25 Ma. Early diversification in Phytelephas at 5.27 Ma could have occurred by trans-Andean vicariance after the western Andes uplifted rapidly at ∼ 10 Ma. Our results show the utility of phylogenomic approaches to shed light on species relationships and their biogeographic history., (Copyright © 2021 Elsevier Inc. All rights reserved.)
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- 2022
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16. Impact of COVID-19 Pandemic on Rheumatology Practice in Latin America.
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Fernández-Ávila DG, Barahona-Correa J, Romero-Alvernia D, Kowalski S, Sapag A, Cachafeiro-Vilar A, Meléndez B, Santiago-Pastelín C, Palleiro D, Arrieta D, Reyes G, Pons-Estel GJ, Then-Báez J, Ugarte-Gil MF, Cardiel MH, Colman N, Chávez N, Burgos PI, Montúfar R, Sandino S, Fuentes-Silva YJ, and Soriano ER
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- COVID-19 Testing, Cross-Sectional Studies, Female, Humans, Latin America epidemiology, Middle Aged, Pandemics, SARS-CoV-2, Surveys and Questionnaires, COVID-19, Rheumatology
- Abstract
Objective: To describe the effect of the coronavirus disease 2019 (COVID-19) pandemic on Latin American rheumatologists from a professional, economic, and occupational point of view., Methods: We conducted an observational cross-sectional study using an online survey sent to rheumatologists of each non-English-speaking country member of the Pan American League of Rheumatology Associations (PANLAR). A specific questionnaire was developed., Results: Our survey included 1097 rheumatologists from 19 Latin American countries. Median (IQR) age of respondents was 48 (40-59) years and 618 (56.3%) were female. Duration of practice since graduation as a rheumatologist was 17 years, and 585 (53.3%) were aged < 50 years. Most rheumatologists worked in private practice (81.8%) and almost half worked in institutional outpatient centers (55%) and inpatient care (49.9%). The median number of weekly hours (IQR) of face-to-face practice before the pandemic was 27 (15-40) hours, but was reduced to 10 (5-20) hours during the pandemic. Telehealth was used by 866 (78.9%) respondents during the pandemic. Most common methods of communication were video calls (555; 50.6%), telephone calls (499; 45.5%), and WhatsApp voice calls (423; 38.6%). A reduction in monthly wages was reported by 946 (86.2%) respondents. Consultation fees also were reduced and 88 (8%) rheumatologists stated they had lost their jobs. A reduction in patient adherence to medication was reported by nearly 50% of respondents. Eighty-one (7.4%) rheumatologists received a COVID-19 diagnosis and 7 (8.6%) of them were hospitalized., Conclusion: The COVID-19 pandemic has reshaped rheumatology practice in Latin America and has had a profound effect on rheumatologists' behaviors and clinical practice., (© 2021 The Journal of Rheumatology.)
- Published
- 2021
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17. Current status of the rheumatologists' workforce in Latin America: a PANLAR collaborative study.
- Author
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Fernández-Ávila DG, Patino-Hernandez D, Kowalskii S, Vargas-Caselles A, Sapag AM, Cachafeiro-Vilar A, Meléndez-Muñoz L, Santiago-Pastelín C, Graf C, Rossetto C, Palleiro D, Trincado D, Fernández-Ávila D, Arrieta D, Reyes G, Then Baez J, Ugarte-Gil MF, Cardiel M, Colman N, Chávez N, Burgos PI, Montúfar R, Sandino S, Fuentes-Silva Y, and Soriano ER
- Subjects
- Cross-Sectional Studies, Humans, Latin America, Middle Aged, Venezuela, Workforce, Rheumatologists, Rheumatology
- Abstract
Introduction: Studies conducted by various scientific societies have shown that the demand for specialized rheumatology care is greater than the projected growth of the workforce. Our research aims to assess the current status of the rheumatology workforce in Latin America., Method: This is a descriptive, cross-sectional study. A survey was created on the RedCap platform. Data were analyzed with STATA 15® Software. We present descriptive analyses. The rate of inhabitants per rheumatologist was calculated using the number of rheumatologists practicing in each country and the inhabitants for year 2020., Results: Our sample was composed by 19 PANLAR member countries in Latin America. Latin America has one rheumatologist per 106,838 inhabitants. The highest rate of rheumatologist per inhabitants was found in Uruguay (1 per 27,426 inhabitants), and the lowest was found in Nicaragua (1 per 640,648 inhabitants). Mean age was 51.59 (SD12.70), ranging between 28 and 96 years of age. Mean monthly compensation was USD $2382.6 (SD$1462.5). The country with lowest salary was Venezuela ($197), whereas the highest was Costa Rica ($4500)., Conclusions: There is a high variability in rheumatologists' workforce characteristics in Latin America. These results could lead to policies aiming to increase the availability and income of rheumatologists, in order to increase opportunity and quality of care of patients living with rheumatic diseases. Key Points • The rheumatologists' workforce varies significantly among Latin American countries. • The supply of rheumatologists is insufficient for meeting the increasing need for specialists in this field.
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- 2021
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18. Palm seed and fruit lipid composition: phylogenetic and ecological perspectives.
- Author
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Guerin C, Serret J, Montúfar R, Vaissayre V, Bastos-Siqueira A, Durand-Gasselin T, Tregear J, Morcillo F, and Dussert S
- Subjects
- Fatty Acids, Humans, Lipids, Phylogeny, Plant Oils, Seeds, Arecaceae, Fruit
- Abstract
Background and Aims: Palms are vital to worldwide human nutrition, in particular as major sources of vegetable oils. However, our knowledge of seed and fruit lipid diversity in the family Arecaceae is limited. We therefore aimed to explore relationships between seed and fruit lipid content, fatty acid composition in the respective tissues, phylogenetic factors and biogeographical parameters., Methods: Oil content and fatty acid composition were characterized in seeds and fruits of 174 and 144 palm species respectively. Distribution, linear regression and multivariate analyses allowed an evaluation of the chemotaxonomic value of these traits and their potential relationship with ecological factors., Key Results: A considerable intra-family diversity for lipid traits was revealed. Species with the most lipid-rich seeds belonged to the tribe Cocoseae, while species accumulating oil in the mesocarp occurred in all subfamilies and two-thirds of the tribes studied. Seed and fruit lipid contents were not correlated. Fatty acid composition of mesocarp oil was highly variable within tribes. By contrast, within-tribe diversity for seed lipid traits was low, whereas between-tribe variability was high. Consequently, multivariate analyses of seed lipid traits produced groupings of species belonging to the same tribe. Medium-chain fatty acids predominated in seeds of most palm species, but they were also accumulated in the mesocarp in some cases. Seed unsaturated fatty acid content correlated with temperature at the coldest latitude of natural occurrence., Conclusion: Several previously uncharacterized palms were identified as potential new sources of vegetable oils for comestible or non-food use. Seed lipid traits reflect genetic drift that occurred during the radiation of the family and therefore are highly relevant to palm chemotaxonomy. Our data also suggest that seed unsaturated fatty acids may provide an adaptive advantage in the coldest environments colonized by palms by maintaining storage lipids in liquid form for efficient mobilization during germination., (© The Author(s) 2019. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2020
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19. Perceptions of agrodiversity and seed-saving practices in the northern Andes of Ecuador.
- Author
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Montúfar R and Ayala M
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- Climate, Developing Countries, Ecuador, Female, Humans, Interviews as Topic, Male, Rural Population, Agriculture methods, Biodiversity, Crops, Agricultural supply & distribution, Food Supply statistics & numerical data, Intergenerational Relations
- Abstract
Background: As concerns about agrodiversity loss and its impact on food security increase, interest in seed-saving practices and motivations has risen, especially in regions characterized by ancestral farming. Agroecology practitioners in the northern Andes of Ecuador (n = 65) participated in this study to describe (1) the dynamics of intergenerational agrodiversity, (2) perceptions of relevance of the crops they grow, (3) criteria for characterizing the differences between conventional and non-conventional seeds, and (4) their seed-saving practices., Methods: This exploratory study incorporated a community-based participatory research approach using mixed methods. We conducted (1) a timeline mapping for exploring the dynamics of intergenerational agrodiversity and (2) structured interviews to explore the perception of relevance of crops grown to identify criteria for characterizing conventional and non-conventional seeds and for identifying seed-saving practices. We computed ranks and frequencies from free listing data derived from the interviews to detect the most salient patterns for crop diversity and seed-saving practices. A principal component analysis was performed to illustrate crops distribution within the study area., Results and Discussion: Based on the timeline-mapping tool, we found that participants perceive an intergenerational loss of agrodiversity. Data derived from free listing determined that salient crops differ in each location of the study area, mostly due to geographic (altitude, climate), market factors, and crop management limitations. Responses from open-ended interview questions revealed that farmers discriminate conventional from non-conventional seeds using yield, adaptation to local conditions, pest tolerance, taste, and crop management as criteria. Analysis of free listing data determined that the most salient reported practices related to seed saving were soil fertility management, seed selection, safe seed storage, tilling and rowing, and weeding., Conclusions: This study contributes to raising awareness of intergenerational agrodiversity loss and replacement with modern crops. We found the relevance of crops and practices is subject to cultural and environmental context, and few agricultural practices are exclusively used for seed saving. Further, farmers clearly discriminate conventional from non-conventional seeds based on advantages and disadvantages, cultural motivation, and produce destination. The community-based participatory approach resulted in positive engagement from participants and promoted commitment from farmers to preserve agrodiversity and support practices at the community level.
- Published
- 2019
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20. Long-fragment targeted capture for long-read sequencing of plastomes.
- Author
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Bethune K, Mariac C, Couderc M, Scarcelli N, Santoni S, Ardisson M, Martin JF, Montúfar R, Klein V, Sabot F, Vigouroux Y, and Couvreur TLP
- Abstract
Premise: Third-generation sequencing methods generate significantly longer reads than those produced using alternative sequencing methods. This provides increased possibilities for the study of biodiversity, phylogeography, and population genetics. We developed a protocol for in-solution enrichment hybridization capture of long DNA fragments applicable to complete plastid genomes., Methods and Results: The protocol uses cost-effective in-house probes developed via long-range PCR and was used in six non-model monocot species (Poaceae: African rice, pearl millet, fonio; and three palm species). DNA was extracted from fresh and silica gel-dried leaves. Our protocol successfully captured long-read plastome fragments (3151 bp median on average), with an enrichment rate ranging from 15% to 98%. DNA extracted from silica gel-dried leaves led to low-quality plastome assemblies when compared to DNA extracted from fresh tissue., Conclusions: Our protocol could also be generalized to capture long sequences from specific nuclear fragments.
- Published
- 2019
- Full Text
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21. Pan-American League of Associations for Rheumatology-Central American, Caribbean and Andean Rheumatology Association Consensus-Conference Endorsements and Recommendations on the Diagnosis and Treatment of Chikungunya-Related Inflammatory Arthropathies in Latin America.
- Author
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Monge P, Vega JM, Sapag AM, Moreno I, Montúfar R, Khoury V, Camilo P, Rivera R, Rueda JC, Jaramillo-Arroyave D, Londoño J, Del Carmen Ruiz M, Fernández F, Quintero M, Fuentes-Silva Y, Aguilar JL, Vallejo-Flores C, Caballero-Uribe CV, Sandoval H, and Pineda C
- Subjects
- Arthritis, Infectious virology, Consensus, Humans, Latin America, Societies, Medical, Arthritis, Infectious diagnosis, Arthritis, Infectious therapy, Chikungunya Fever complications, Health Policy, Rheumatology
- Abstract
Background/objective: Although mortality rates related with chikungunya (CHIK) outbreaks in Latin America's (LA's) dengue-endemic rural and new urban regions are low, dealing with symptoms and sequelae can both produce a significant burden of disease and diminish quality of life-from many months to years-after the acute phase of the infection, with a significant impact on public and individual health.The aim of this work was to establish Pan-American League of Associations for Rheumatology-Central American, Caribbean and Andean Rheumatology Association (ACCAR) consensus-conference endorsements and recommendations on the diagnosis and treatment of CHIK-related inflammatory arthropathies transmitted by Aedes aegypti and Aedes albopictus in LA., Methods: Based on the Consensus Development Conference format, a panel of ACCAR rheumatologist voting members (n = 10) took part in this Pan-American League of Associations for Rheumatology initiative. Experts voted from a previous content analysis of the medical literature on CHIK, 4 subsequent topic conferences, and a workshop. Consensus represents the majority agreement (≥80%) achieved for each recommendation., Results: The experts' panel reached 4 overarching principles: (1) CHIK virus (CHIKV) is a re-emergent virus transmitted by 2 species of mosquitoes: A. aegypti and A. albopictus; (2) CHIKV caused massive outbreaks in LA; (3) chronic CHIKV infection produces an inflammatory joint disease that, in some cases, can last for several months to years, and (4) currently, there are no vaccines or antivirals licensed for CHIKV infections., Recommendations: Pan-American League of Associations for Rheumatology-ACCAR achieved 13 endorsements and recommendations on CHIK categorized in 3 groups: (1) epidemiology and clinical manifestations, (2) diagnosis, and (3) treatment, representing the consensus agreement from the panel's members.
- Published
- 2019
- Full Text
- View/download PDF
22. Genetic structuring in a Neotropical palm analyzed through an Andean orogenesis-scenario.
- Author
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Escobar S, Pintaud JC, Balslev H, Bernal R, Moraes Ramírez M, Millán B, and Montúfar R
- Abstract
Andean orogenesis has driven the development of very high plant diversity in the Neotropics through its impact on landscape evolution and climate. The analysis of the intraspecific patterns of genetic structure in plants would permit inferring the effects of Andean uplift on the evolution and diversification of Neotropical flora. In this study, using microsatellite markers and Bayesian clustering analyses, we report the presence of four genetic clusters for the palm Oenocarpus bataua var. bataua which are located within four biogeographic regions in northwestern South America: (a) Chocó rain forest, (b) Amotape-Huancabamba Zone, (c) northwestern Amazonian rain forest, and (d) southwestern Amazonian rain forest. We hypothesize that these clusters developed following three genetic diversification events mainly promoted by Andean orogenic events. Additionally, the distinct current climate dynamics among northwestern and southwestern Amazonia may maintain the genetic diversification detected in the western Amazon basin. Genetic exchange was identified between the clusters, including across the Andes region, discarding the possibility of any cluster to diversify as a distinct intraspecific variety. We identified a hot spot of genetic diversity in the northern Peruvian Amazon around the locality of Iquitos. We also detected a decrease in diversity with distance from this area in westward and southward direction within the Amazon basin and the eastern Andean foothills. Additionally, we confirmed the existence and divergence of O. bataua var. bataua from var. oligocarpus in northern South America, possibly expanding the distributional range of the latter variety beyond eastern Venezuela, to the central and eastern Andean cordilleras of Colombia. Based on our results, we suggest that Andean orogenesis is the main driver of genetic structuring and diversification in O. bataua within northwestern South America.
- Published
- 2018
- Full Text
- View/download PDF
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