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Ocean turbulent mixing is a key process affecting the uptake and redistribution of heat, carbon, nutrients, oxygen and other dissolved gasses. Vertical turbulent diffusivity sets the rates of water mass transformations and ocean mixing, and is intrinsically an average quantity over process time scales. Estimates based on microstructure profiling, however, are typically obtained as averages over individual profiles. How representative such averaged diffusivities are, remains unexplored in the quiescent Arctic Ocean. Here, we compare upper ocean vertical diffusivities in winter, derived from the 7Be tracer‐based approach to those estimated from direct turbulence measurements during the year‐long Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) expedition, 2019–2020. We found that diffusivity estimates from both methods agree within their respective measurement uncertainties. Diffusivity estimates obtained from dissipation rate profiles are sensitive to the averaging method applied, and the processing and analysis of similar data sets must take this sensitivity into account. Our findings indicate low characteristic diffusivities around 10−6 m2 s−1 and correspondingly low vertical heat fluxes. Plain Language Summary: Ocean turbulent mixing plays an important role in the uptake and redistribution of heat, carbon, nutrients, oxygen and other properties. For example, this process delivers nutrients to the sunlit surface ocean where they are utilized to produce plants (phytoplankton) for the ecosystem food web. However, strong changes in density within the upper Arctic Ocean hinder vertical transport of nutrients, such that nutrient fluxes are generally smaller than those observed elsewhere in the world ocean. Furthermore, low vertical transport rates isolate the surface ocean from heat input from below which helps protect the ice from melting. Here, we compare the strength of upper ocean mixing, an important parameter for the calculation of vertical transport, derived from two independent methods during the MOSAiC (Multidisciplinary drifting Observatory for the Study of Arctic Climate) ice drift experiment, 2019–2020. This comparison allows us to better quantify the vertical diffusivity, and in turn also the vertical transport of for example, heat and nutrients in the ocean. Key Points: Arctic Ocean vertical diffusivity (Kz) in the upper halocline in winter is O(10−6) m2 s−1Diffusivity estimates from 7Be measurements and ocean microstructure profiling agree within a factor of 2Kz estimates from turbulent dissipation rate profiles are sensitive to the averaging method [ABSTRACT FROM AUTHOR]

On a global scale the ratio of fixed nitrogen (N) and phosphate (P) is characterized by a deficit of N with regard to the classical Redfield ratio of N: P = 16 : 1 reflecting the impact of N loss occurring in the oceanic oxygen minimum zones. The northern Benguela upwelling system (NBUS) is known for losses of N and the accumulation of P in sub- and anoxic bottom waters and sediments of the Namibian shelf resulting in low N: P ratios in the water column. To study the impact of the N: P anomalies on the regional carbon cycle and their consequences for the export of nutrients from the NBUS into the oligotrophic subtropical gyre of the South Atlantic, we measured dissolved inorganic carbon (CT), total alkalinity (AT), oxygen (O2) and nutrient concentrations in February 2011. The results indicate increased P concentrations over the Namibian shelf due to P efflux from sediments resulting in a C :N: P : -O2 ratio of 106 : 16 : 1.6 : 138. N reduction further increase C :N and reduce N: P ratios in those regions where O2 concentrations in bottom waters are < 20 μmol kg-1. However, off the shelf along the continental margin, the mean C :N: P : -O2 ratio is again close to the Redfield stoichiometry. Additional nutrient data measured during two cruises in 2008 and 2009 imply that the amount of excess P, which is created in the bottom waters on the shelf, and its export into the subtropical gyre after upwelling varies through time. The results further reveal an inter-annual variability of excess N within the South Atlantic Central Water (SACW) that flows from the north into the NBUS, with highest N values observed in 2008. It is postulated that the N excess in SACWoccurred due to the impact of remineralized organic matter produced by N2 fixation and that the magnitude of excess P formation and its export is governed by inputs of excess N along with SACW flowing into the NBUS. Factors controlling N2 fixation north of the BUS need to be addressed in future studies to better understand the role of the NBUS as a P source and N sink in the coupled C:N: P cycles. [ABSTRACT FROM AUTHOR]

Ocean turbulent mixing is a key process in the global climate system, regulating ocean circulation and the uptake and redistribution of heat, carbon, nutrients, oxygen and other tracers. In polar oceans, turbulent heat transport additionally affects the sea ice mass balance. Due to the inaccessibility of polar regions, direct observations of turbulent mixing are sparse in the Arctic Ocean. During the year-long drift expedition "Multidisciplinary drifting Observatory for the Study of Arctic Climate" (MOSAiC) from September 2019 to September 2020, we obtained an unprecedented data set of vertical profiles of turbulent dissipation rate and water column properties, including oxygen concentration and fluorescence. Nearly 1,700 profiles, covering the upper ocean down to approximately 400 m, were collected in sets of 3 or more consecutive profiles every day, and complemented with several intensive sampling periods. This data set allows for the systematic assessment of upper ocean mixing in the Arctic, and the quantification of turbulent heat and nutrient fluxes, and can help to better constrain turbulence parameterizations in ocean circulation models., (© 2022. The Author(s).)

Fungi are ubiquitous in the ocean and hypothesized to be important members of marine ecosystems, but their roles in the marine carbon cycle are poorly understood. Here, we use 13 C DNA stable isotope probing coupled with phylogenetic analyses to investigate carbon assimilation within diverse communities of planktonic and benthic fungi in the Benguela Upwelling System (Namibia). Across the redox stratified water column and in the underlying sediments, assimilation of 13 C-labeled carbon from diatom extracellular polymeric substances ( 13 C-dEPS) by fungi correlated with the expression of fungal genes encoding carbohydrate-active enzymes. Phylogenetic analysis of genes from 13 C-labeled metagenomes revealed saprotrophic lineages related to the facultative yeast Malassezia were the main fungal foragers of pelagic dEPS. In contrast, fungi living in the underlying sulfidic sediments assimilated more 13 C-labeled carbon from chemosynthetic bacteria compared to dEPS. This coincided with a unique seafloor fungal community and dissolved organic matter composition compared to the water column, and a 100-fold increased fungal abundance within the subseafloor sulfide-nitrate transition zone. The subseafloor fungi feeding on 13 C-labeled chemolithoautotrophs under anoxic conditions were affiliated with Chytridiomycota and Mucoromycota that encode cellulolytic and proteolytic enzymes, revealing polysaccharide and protein-degrading fungi that can anaerobically decompose chemosynthetic necromass. These subseafloor fungi, therefore, appear to be specialized in organic matter that is produced in the sediments. Our findings reveal that the phylogenetic diversity of fungi across redox stratified marine ecosystems translates into functionally relevant mechanisms helping to structure carbon flow from primary producers in marine microbiomes from the surface ocean to the subseafloor., (© 2021. The Author(s).)

The genomes of the Asgard superphylum of Archaea hold clues pertaining to the nature of the host cell that acquired the mitochondrion at the origin of eukaryotes 1-4 . Representatives of the Asgard candidate phylum Candidatus Lokiarchaeota (Lokiarchaeon) have the capacity for acetogenesis and fermentation 5-7 , but how their metabolic activity responds to environmental conditions is poorly understood. Here, we show that in anoxic Namibian shelf sediments, Lokiarchaeon gene expression levels are higher than those of bacterial phyla and increase with depth below the seafloor. Lokiarchaeon gene expression was significantly different across a hypoxic-sulfidic redox gradient, whereby genes involved in growth, fermentation and H 2 -dependent carbon fixation had the highest expression under the most reducing (sulfidic) conditions. Quantitative stable isotope probing revealed that anaerobic utilization of CO 2 and diatomaceous extracellular polymeric substances by Lokiarchaeon was higher than the bacterial average, consistent with higher expression of Lokiarchaeon genes, including those involved in transport and fermentation of sugars and amino acids. The quantitative stable isotope probing and gene expression data demonstrate homoacetogenic activity of Candidatus Lokiarchaeota, whereby fermentative H 2 production from organic substrates is coupled with the Wood-Ljungdahl carbon fixation pathway 8 . The high energetic efficiency provided by homoacetogenesis 8 helps to explain the elevated metabolic activity of Lokiarchaeon in this anoxic, energy-limited setting.

Changes in the complexity of planktonic food webs may be expected in future aquatic systems due to increases in sea surface temperature and an enhanced stratification of the water column. Under these conditions, the growth of unpalatable, filamentous, N 2 -fixing cyanobacterial blooms, and their effect on planktonic food webs will become increasingly important. The planktonic food web structure in aquatic ecosystems at times of filamentous cyanobacterial blooms is currently unresolved, with discordant lines of evidence suggesting that herbivores dominate the mesozooplankton or that mesozooplankton organisms are mainly carnivorous. Here, we use a set of proxies derived from amino acid nitrogen stable isotopes from two mesozooplankton size fractions to identify changes in the nitrogen source and the planktonic food web structure across different microplankton communities. A transition from herbivory to carnivory in mesozooplankton between more eutrophic, near-coastal sites and more oligotrophic, offshore sites was accompanied by an increasing diversity of microplankton communities with aging filamentous cyanobacterial blooms. Our analyses of 124 biotic and abiotic variables using multivariate statistics confirmed salinity as a major driver for the biomass distribution of non-N 2 -fixing microplankton species such as dinoflagellates. However, we provide strong evidence that stratification, N 2 fixation, and the stage of the cyanobacterial blooms regulated much of the microplankton diversity and the mean trophic position and size of the metabolic nitrogen pool in mesozooplankton. Our empirical, macroscale data set consistently unifies contrasting results of the dominant feeding mode in mesozooplankton during blooms of unpalatable, filamentous, N 2 -fixing cyanobacteria by identifying the at times important role of heterotrophic microbial food webs. Thus, carnivory, rather than herbivory, dominates in mesozooplankton during aging and decaying cyanobacterial blooms with hitherto uncharacterized consequences for the biogeochemical functions of mesozooplankton., (© 2019 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.)

In the Benguela upwelling system, the environmental conditions are determined to a large extent by central water masses advected from remote areas onto the shelf. The origin, spreading pathways and fate of those water masses are investigated with a regional ocean model that is analysed using Eulerian passive tracers and on the basis of Lagrangian trajectories. Two major water masses influencing the Benguela upwelling system are identified: tropical South Atlantic Central Water (SACW) and subtropical Eastern South Atlantic Central Water (ESACW). The spreading of tropical waters into the subtropical Benguela upwelling system is mediated by equatorial currents and their continuation in the Southeast Atlantic. This tropical-subtropical connection has been attributed to signal propagation in the equatorial and coastal waveguides. However, there exists an additional spreading path for tropical central water in the open ocean. This mass transport fluctuates on a seasonal scale around an averaged meridional transport in Sverdrup balance. The inter-annual variability of the advection of tropical waters is related to Benguela Niños, as evidenced by the 2010/2011 event. The northern Benguela upwelling system is a transition zone between SACW and ESACW since they encounter each other at about 20°S. Both water masses have seasonal variable shares in the upwelled water there. To summarise the main pathways of central water mass transport, an enhanced scheme for the subsurface circulation in the Southeast Atlantic is presented., Competing Interests: The authors have declared that no competing interests exist.