79 results on '"Modave F"'
Search Results
2. Computation for Science and Engineering.
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Magoc?, T., Freudenthal, E., and Modave, F.
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- 2010
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3. Decision making for robust resilient systems
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Alo, R., primary, de Korvin, A., additional, and Modave, F., additional
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- 2003
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4. Asymmetric paternalism: Description of the phenomenon, explanation based on decisions under uncertainty, and possible applications to education.
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Kosheleva, O. and Modave, F.
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- 2008
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5. Interval-based multi-criteria decision making: Strategies to order intervals.
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Magoc, T., Ceberio, M., and Modave, F.
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- 2008
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6. Selecting the most representative sample is NP-hard: Need for expert (fuzzy) knowledge.
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Gamez, J.E., Modave, F., and Kosheleva, O.
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- 2008
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7. On Probability of Making a Given Decision: A Theoretically Justified Transition From Interval to Fuzzy Uncertainty.
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Van Nam Huynh, Nakamori, Y., and Modave, F.
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- 2007
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8. Comparing Attacks: An Approach Based on Interval Computation and Fuzzy Integration.
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Ceberio, M., Modave, F., and Xiaojing Wang
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- 2005
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9. Using 1D radar observations to detect a space explosion core among the explosion fragments: sequential and distributed algorithms.
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Debroux, P., Boehm, J., Modave, F., Kreinovich, V., Xiang, G., Beck, J., Tupelly, K., Kandathi, R., Longpre, L., and Villaverde, K.
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- 2004
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10. Qualitative multicriteria decision making based on the Sugeno integral.
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Iourinski, D. and Modave, F.
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- 2003
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11. The use of fuzzy measures as a data fusion tool in geographic information systems: case study.
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Campos, C., Keller, G.R., Kreinovich, V., Longpre, L., Modave, F., Starks, S.A., and Torres, R.
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- 2003
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12. Fuzzy functions to select an optimal action in decision theory.
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Alo, R., de Korvin, A., and Modave, F.
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- 2002
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13. Fuzzy measures and integrals as aggregation operators: solving the commensurability problem.
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Modave, F. and Kreinovich, V.
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- 2002
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14. A measurement theory perspective for MCDM.
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Modave, F. and Eklund, P.
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- 2001
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15. Relating decision under uncertainty and multicriteria decision making models
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Dubois, D., primary, Grabisch, M., additional, Modave, F., additional, and Prade, H., additional
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- 2000
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16. Explore Care Pathways of Colorectal Cancer Patients with Social Network Analysis
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Huo T, Tj, George, Guo Y, Zhe He, Prosperi M, Modave F, and Bian J
17. Examining healthcare utilization patterns of elderly middle-aged adults in the United States
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Zayas, C. E., He, Z., Yuan, J., Maldonado-Molina, M., William Hogan, Modave, F., Guo, Y., and Bian, J.
18. Computable Eligibility Criteria through Ontology-driven Data Access: A Case Study of Hepatitis C Virus Trials
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Zhang, H., He, Z., He, X., Guo, Y., Nelson, D. R., Modave, F., Yonghui Wu, Hogan, W., Prosperi, M., and Bian, J.
19. Fuzzy measures and integrals as aggregation operators: solving the commensurability problem
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Modave, F., primary and Kreinovich, V., additional
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20. Comparison of Computer Attacks: An Application of Interval-based Fuzzy Integration
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Modave, F., primary, Ceberio, M., additional, Wang, X., additional, Xiang, G., additional, Garay, O., additional, Ramirez, R., additional, and Tejeda, R., additional
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21. The use of fuzzy measures as a data fusion tool in geographic information systems: case study
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Campos, C., primary, Keller, G.R., additional, Kreinovich, V., additional, Longpre, L., additional, Modave, F., additional, Starks, S.A., additional, and Torres, R., additional
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22. Fuzzy functions to select an optimal action in decision theory
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Alo, R., primary, de Korvin, A., additional, and Modave, F., additional
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23. A measurement theory perspective for MCDM
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Modave, F., primary and Eklund, P., additional
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24. Decision making for robust resilient systems.
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Alo, R., de Korvin, A., and Modave, F.
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- 2003
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25. Evaluating ChatGPT's moral competence in health care-related ethical problems.
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Rashid AA, Skelly RA, Valdes CA, Patel PP, Solberg LB, Giordano CR, and Modave F
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Objectives: Artificial intelligence tools such as Chat Generative Pre-trained Transformer (ChatGPT) have been used for many health care-related applications; however, there is a lack of research on their capabilities for evaluating morally and/or ethically complex medical decisions. The objective of this study was to assess the moral competence of ChatGPT., Materials and Methods: This cross-sectional study was performed between May 2023 and July 2023 using scenarios from the Moral Competence Test (MCT). Numerical responses were collected from ChatGPT 3.5 and 4.0 to assess individual and overall stage scores, including C-index and overall moral stage preference. Descriptive analysis and 2-sided Student's t -test were used for all continuous data., Results: A total of 100 iterations of the MCT were performed and moral preference was found to be higher in the latter Kohlberg-derived arguments. ChatGPT 4.0 was found to have a higher overall moral stage preference (2.325 versus 1.755) when compared to ChatGPT 3.5. ChatGPT 4.0 was also found to have a statistically higher C-index score in comparison to ChatGPT 3.5 (29.03 ± 11.10 versus 19.32 ± 10.95, P =. 0000275)., Discussion: ChatGPT 3.5 and 4.0 trended towards higher moral preference for the latter stages of Kohlberg's theory for both dilemmas with C-indices suggesting medium moral competence. However, both models showed moderate variation in C-index scores indicating inconsistency and further training is recommended., Conclusion: ChatGPT demonstrates medium moral competence and can evaluate arguments based on Kohlberg's theory of moral development. These findings suggest that future revisions of ChatGPT and other large language models could assist physicians in the decision-making process when encountering complex ethical scenarios., Competing Interests: The authors declare no conflicts of interest., (© The Author(s) 2024. Published by Oxford University Press on behalf of the American Medical Informatics Association.)
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- 2024
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26. Development of a Probabilistic Boolean network (PBN) to model intraoperative blood pressure management.
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Gunaratne C, Ison R, Price CC, Modave F, and Tighe P
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- Humans, Blood Pressure, Algorithms
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Background: Blood pressure is a vital sign for organ perfusion that anesthesiologists measure and modulate during surgery. However, current decision-making processes rely heavily on clinicians' experience, which can lead to variability in treatment across surgeries. With the advent of machine learning, we can now create models to predict the outcomes of interventions and guide perioperative decision-making. The first step in this process involves translating the clinical decision-making process into a framework understood by an algorithm. Probabilistic Boolean networks (PBNs) provide an information-rich approach to this problem. A PBN trends toward a steady state, and its decisions are easily understood via its Boolean predictor functions. We hypothesize that a PBN can be developed that corrects hemodynamic instability in patients by selecting clinical interventions to maintain blood pressure within a given range., Methods: Data on patients over the age of 65 undergoing surgery with general anesthesia from 2018 to 2020 were drawn from the UF Health PRECEDE data set with IRB approval (IRB201700747). Parameters examined included heart rate, blood pressure, and frequency of medications given 15 min after anesthetic induction and 15 min before awakening. The medication frequency data were truncated into a 66/33 split for the training and validation set used in the PBN. The model was coded using Python 3 and evaluated by comparing the frequency of medications chosen by the program to the values in the testing set via linear regression analysis., Results: The network developed successfully models a hemodynamically unstable patient and corrects the imbalance by administering medications. This is evidenced by the model achieving a stable, steady state matrix in all iterations. However, the model's ability to emulate clinical drug selection was variable. It was successful with its use of vasodilator selection but struggled with the appropriate selection of vasopressors., Conclusions: The PBN has demonstrated the ability to choose appropriate interventions based on a patient's current vitals. Additional work must be done to have the network emulate the frequency at which drugs are selected from in clinical practice. In its current state, the model provides an understanding of how a PBN behaves in the context of correcting hemodynamic instability and can aid in developing more robust models in the future., Competing Interests: Declaration of competing interest The authors declare no conflicts of interest., (Copyright © 2024. Published by Elsevier B.V.)
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- 2024
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27. Classifying early infant feeding status from clinical notes using natural language processing and machine learning.
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Lemas DJ, Du X, Rouhizadeh M, Lewis B, Frank S, Wright L, Spirache A, Gonzalez L, Cheves R, Magalhães M, Zapata R, Reddy R, Xu K, Parker L, Harle C, Young B, Louis-Jaques A, Zhang B, Thompson L, Hogan WR, and Modave F
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- Female, Humans, Infant, Software, Electronic Health Records, Mothers, Natural Language Processing, Machine Learning
- Abstract
The objective of this study is to develop and evaluate natural language processing (NLP) and machine learning models to predict infant feeding status from clinical notes in the Epic electronic health records system. The primary outcome was the classification of infant feeding status from clinical notes using Medical Subject Headings (MeSH) terms. Annotation of notes was completed using TeamTat to uniquely classify clinical notes according to infant feeding status. We trained 6 machine learning models to classify infant feeding status: logistic regression, random forest, XGBoost gradient descent, k-nearest neighbors, and support-vector classifier. Model comparison was evaluated based on overall accuracy, precision, recall, and F1 score. Our modeling corpus included an even number of clinical notes that was a balanced sample across each class. We manually reviewed 999 notes that represented 746 mother-infant dyads with a mean gestational age of 38.9 weeks and a mean maternal age of 26.6 years. The most frequent feeding status classification present for this study was exclusive breastfeeding [n = 183 (18.3%)], followed by exclusive formula bottle feeding [n = 146 (14.6%)], and exclusive feeding of expressed mother's milk [n = 102 (10.2%)], with mixed feeding being the least frequent [n = 23 (2.3%)]. Our final analysis evaluated the classification of clinical notes as breast, formula/bottle, and missing. The machine learning models were trained on these three classes after performing balancing and down sampling. The XGBoost model outperformed all others by achieving an accuracy of 90.1%, a macro-averaged precision of 90.3%, a macro-averaged recall of 90.1%, and a macro-averaged F1 score of 90.1%. Our results demonstrate that natural language processing can be applied to clinical notes stored in the electronic health records to classify infant feeding status. Early identification of breastfeeding status using NLP on unstructured electronic health records data can be used to inform precision public health interventions focused on improving lactation support for postpartum patients., (© 2024. The Author(s).)
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- 2024
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28. Telehealth Implementation Response to COVID-19 in the OneFlorida+ Clinical Research Network: Perspectives of Clinicians and Health Systems Leaders.
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Theis RP, Dorbu JI, Mavrodieva ME, Guerrero RA, Wright SE, Donahoo WT, Modave F, Carrasquillo O, and Shenkman EA
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- Humans, Pandemics, Data Accuracy, Government Programs, COVID-19 epidemiology, Telemedicine
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Introduction: The COVID-19 pandemic forced health systems worldwide to make rapid adjustments to patient care. Nationwide stay-at-home mandates and public health concerns increased demand for telehealth to maintain patients' continuity of care. These circumstances permitted observation of telehealth implementation in real-world settings at a large scale. This study aimed to understand clinician and health system leader (HSL) experiences in expanding, implementing, and sustaining telehealth during COVID-19 in the OneFlorida+ clinical research network. Methods: We conducted semistructured videoconference interviews with 5 primary care providers, 7 specialist providers, and 12 HSLs across 7 OneFlorida+ health systems and settings. Interviews were audiorecorded, transcribed, and summarized using deductive team-based template coding. We then used matrix analysis to organize the qualitative data and identify inductive themes. Results: Rapid telehealth implementation occurred even among sites with low readiness, facilitated by responsive planning, shifts in resource allocation, and training. Common hurdles in routine telehealth use, including technical and reimbursement issues, were also barriers to telehealth implementation. Acceptability of telehealth was influenced by benefits such as the providers' ability to view a patient's home environment and the availability of tools to enhance patient education. Lower acceptability stemmed from the inability to conduct physical examinations during the shutdown. Conclusions: This study identified a broad range of barriers, facilitators, and strategies for implementing telehealth within large clinical research networks. The findings can contribute to optimizing the effectiveness of telehealth implementation in similar settings, and point toward promising directions for telehealth provider training to improve acceptability and promote sustainability.
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- 2024
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29. Racial disparities in septic shock mortality: a retrospective cohort study.
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Black LP, Hopson C, Puskarich MA, Modave F, Booker SQ, DeVos E, Fernandez R, Garvan C, and Guirgis FW
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Background: Patients with septic shock have the highest risk of death from sepsis, however, racial disparities in mortality outcomes in this cohort have not been rigorously investigated. Our objective was to describe the association between race/ethnicity and mortality in patients with septic shock., Methods: Our study is a retrospective cohort study of adult patients in the OneFlorida Data Trust (Florida, United States of America) admitted with septic shock between January 2012 and July 2018 . We identified patients as having septic shock if they received vasopressors during their hospital encounter and had either an explicit International Classification of Disease (ICD) code for sepsis, or had an infection ICD code and received intravenous antibiotics. Our primary outcome was 90-day mortality. Our secondary outcome was in-hospital mortality. Multiple logistic regression with Least Absolute Shrinkage and Selection Operator (LASSO) for variable selection was used to assess associations., Findings: There were 13,932 patients with septic shock in our cohort. The mean age was 61 years (SD 16), 68% of the cohort identified as White (n = 9419), 28% identified as Black (n = 3936), 2% (n = 294) identified as Hispanic ethnicity, and 2% as other races not specified in the previous groups (n = 283). In our logistic regression model for 90-day mortality, patients identified as Black had 1.57 times the odds of mortality (95% CI 1.07-2.29, p = 0.02) compared to White patients. Other significant predictors included mechanical ventilation (OR 3.66, 95% CI 3.35-4.00, p < 0.01), liver disease (OR 1.75, 95% CI 1.59-1.93, p < 0.01), laboratory components of the Sequential Organ Failure Assessment score (OR 1.18, 95% CI 1.16-1.21, p < 0.01), lactate (OR 1.10, 95% CI 1.08-1.12, p < 0.01), congestive heart failure (OR 1.19, 95% CI 1.10-1.30, p < 0.01), human immunodeficiency virus (OR 1.35, 95% CI 1.04-1.75, p = 0.03), age (OR 1.04, 95% CI 1.04-1.04, p < 0.01), and the interaction between age and race (OR 0.99, 95% CI 0.99-1.00, p < 0.01). Among younger patients (<45 years), patients identified as Black accounted for a higher proportion of the deaths. Results were similar in the in-hospital mortality model., Interpretation: In this retrospective study of septic shock patients, we found that patients identified as Black had higher odds of mortality compared to patients identified as non-Hispanic White. Our findings suggest that the greatest disparities in mortality are among younger Black patients with septic shock., Funding: National Institutes of Health National Center for Advancing Translational Sciences (1KL2TR001429); National Institute of Health National Institute of General Medical Sciences (1K23GM144802)., Competing Interests: Lauren Page Black, MD, MPH: Discloses that funding for this work was provided by the National Institutes of Health. Specifically, National Center for Advancing Translational Sciences (1KL2TR001429) supported the cost of data access fees, OneFlorida Data Trust fees, statistical support, and salary support for Dr. Black. National Institute of General Medical Sciences (1K23GM144802) supported salary support for LPB, statistical support, publication fees. Dr. Black's grants support her travel to conferences to present results from her research. Faheem W. Guirgis, MD: Discloses funding from NIH/NIGMS (R01GM133815). He also discloses consulting fees from Abbott Pharmaceuticals for sepsis diagnostics consulting. All other authors declare no competing interests., (© 2023 The Authors.)
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- 2023
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30. Machine learning-based prediction models for home discharge in patients with COVID-19: Development and evaluation using electronic health records.
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Zapata RD, Huang S, Morris E, Wang C, Harle C, Magoc T, Mardini M, Loftus T, and Modave F
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- Adult, Humans, Middle Aged, Retrospective Studies, Electronic Health Records, Bayes Theorem, Machine Learning, Patient Discharge, COVID-19 epidemiology
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Objective: This study aimed to develop and validate predictive models using electronic health records (EHR) data to determine whether hospitalized COVID-19-positive patients would be admitted to alternative medical care or discharged home., Methods: We conducted a retrospective cohort study using deidentified data from the University of Florida Health Integrated Data Repository. The study included 1,578 adult patients (≥18 years) who tested positive for COVID-19 while hospitalized, comprising 960 (60.8%) female patients with a mean (SD) age of 51.86 (18.49) years and 618 (39.2%) male patients with a mean (SD) age of 54.35 (18.48) years. Machine learning (ML) model training involved cross-validation to assess their performance in predicting patient disposition., Results: We developed and validated six supervised ML-based prediction models (logistic regression, Gaussian Naïve Bayes, k-nearest neighbors, decision trees, random forest, and support vector machine classifier) to predict patient discharge status. The models were evaluated based on the area under the receiver operating characteristic curve (ROC-AUC), precision, accuracy, F1 score, and Brier score. The random forest classifier exhibited the highest performance, achieving an accuracy of 0.84 and an AUC of 0.72. Logistic regression (accuracy: 0.85, AUC: 0.71), k-nearest neighbor (accuracy: 0.84, AUC: 0.63), decision tree (accuracy: 0.84, AUC: 0.61), Gaussian Naïve Bayes (accuracy: 0.84, AUC: 0.66), and support vector machine classifier (accuracy: 0.84, AUC: 0.67) also demonstrated valuable predictive capabilities., Significance: This study's findings are crucial for efficiently allocating healthcare resources during pandemics like COVID-19. By harnessing ML techniques and EHR data, we can create predictive tools to identify patients at greater risk of severe symptoms based on their medical histories. The models developed here serve as a foundation for expanding the toolkit available to healthcare professionals and organizations. Additionally, explainable ML methods, such as Shapley Additive Explanations, aid in uncovering underlying data features that inform healthcare decision-making processes., Competing Interests: The authors have declared that no competing interests exist, (Copyright: © 2023 Zapata et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2023
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31. Clinical Decision Support Systems for Palliative Care Management: A Scoping Review.
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Santos FCD, Snigurska UA, Keenan GM, Lucero RJ, and Modave F
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- Humans, Palliative Care, Referral and Consultation, Decision Support Systems, Clinical, Hospice and Palliative Care Nursing
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Context: With the expansion of palliative care services in clinical settings, clinical decision support systems (CDSSs) have become increasingly crucial for assisting bedside nurses and other clinicians in improving the quality of care to patients with life-limiting health conditions., Objectives: To characterize palliative care CDSSs and explore end-users' actions taken, adherence recommendations, and clinical decision time., Methods: The CINAHL, Embase, and PubMed databases were searched from inception to September 2022. The review was developed following the preferred reporting items for systematic reviews and meta-analyses extension for scoping reviews guidelines. Qualified studies were described in tables and assessed the level of evidence., Results: A total of 284 abstracts were screened, and 12 studies comprised the final sample. The CDSSs selected focused on identifying patients who could benefit from palliative care based on their health status, making referrals to palliative care services, and managing medications and symptom control. Despite the variability of palliative CDSSs, all studies reported that CDSSs assisted clinicians in becoming more informed about palliative care options leading to better decisions and improved patient outcomes. Seven studies explored the impact of CDSSs on end-user adherence. Three studies revealed high adherence to recommendations while four had low adherence. Lack of feature customization and trust in guideline-based in the initial stages of feasibility and usability testing were evident, limiting the usefulness for nurses and other clinicians., Conclusion: This study demonstrated that implementing palliative care CDSSs can assist nurses and other clinicians in improving the quality of care for palliative patients. The studies' different methodological approaches and variations in palliative CDSSs made it challenging to compare and validate the applicability under which CDSSs are effective. Further research utilizing rigorous methods to evaluate the impact of clinical decision support features and guideline-based actions on clinicians' adherence and efficiency is recommended., (Copyright © 2023 American Academy of Hospice and Palliative Medicine. Published by Elsevier Inc. All rights reserved.)
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- 2023
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32. Study protocol for a type III hybrid effectiveness-implementation trial to evaluate scaling interoperable clinical decision support for patient-centered chronic pain management in primary care.
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Salloum RG, Bilello L, Bian J, Diiulio J, Paz LG, Gurka MJ, Gutierrez M, Hurley RW, Jones RE, Martinez-Wittinghan F, Marcial L, Masri G, McDonnell C, Militello LG, Modave F, Nguyen K, Rhodes B, Siler K, Willis D, and Harle CA
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- Analgesics, Opioid adverse effects, Humans, Pain Management, Patient-Centered Care, Primary Health Care, Chronic Pain drug therapy, Decision Support Systems, Clinical
- Abstract
Background: The US continues to face public health crises related to both chronic pain and opioid overdoses. Thirty percent of Americans suffer from chronic noncancer pain at an estimated yearly cost of over $600 billion. Most patients with chronic pain turn to primary care clinicians who must choose from myriad treatment options based on relative risks and benefits, patient history, available resources, symptoms, and goals. Recently, with attention to opioid-related risks, prescribing has declined. However, clinical experts have countered with concerns that some patients for whom opioid-related benefits outweigh risks may be inappropriately discontinued from opioids. Unfortunately, primary care clinicians lack usable tools to help them partner with their patients in choosing pain treatment options that best balance risks and benefits in the context of patient history, resources, symptoms, and goals. Thus, primary care clinicians and patients would benefit from patient-centered clinical decision support (CDS) for this shared decision-making process., Methods: The objective of this 3-year project is to study the adaptation and implementation of an existing interoperable CDS tool for pain treatment shared decision making, with tailored implementation support, in new clinical settings in the OneFlorida Clinical Research Consortium. Our central hypothesis is that tailored implementation support will increase CDS adoption and shared decision making. We further hypothesize that increases in shared decision making will lead to improved patient outcomes, specifically pain and physical function. The CDS implementation will be guided by the Exploration, Preparation, Implementation, Sustainment (EPIS) framework. The evaluation will be organized by the Reach, Effectiveness, Adoption, Implementation, and Maintenance (RE-AIM) framework. We will adapt and tailor PainManager, an open source interoperable CDS tool, for implementation in primary care clinics affiliated with the OneFlorida Clinical Research Consortium. We will evaluate the effect of tailored implementation support on PainManager's adoption for pain treatment shared decision making. This evaluation will establish the feasibility and obtain preliminary data in preparation for a multi-site pragmatic trial targeting the effectiveness of PainManager and tailored implementation support on shared decision making and patient-reported pain and physical function., Discussion: This research will generate evidence on strategies for implementing interoperable CDS in new clinical settings across different types of electronic health records (EHRs). The study will also inform tailored implementation strategies to be further tested in a subsequent hybrid effectiveness-implementation trial. Together, these efforts will lead to important new technology and evidence that patients, clinicians, and health systems can use to improve care for millions of Americans who suffer from pain and other chronic conditions., Trial Registration: ClinicalTrials.gov, NCT05256394 , Registered 25 February 2022., (© 2022. The Author(s).)
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- 2022
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33. Telehealth and racial disparities in colorectal cancer screening: A pilot study of how virtual clinician characteristics influence screening intentions.
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Cooks EJ, Duke KA, Neil JM, Vilaro MJ, Wilson-Howard D, Modave F, George TJ, Odedina FT, Lok BC, Carek P, Laber EB, Davidian M, and Krieger JL
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Introduction: Racial disparities in colorectal cancer (CRC) can be addressed through increased adherence to screening guidelines. In real-life encounters, patients may be more willing to follow screening recommendations delivered by a race concordant clinician. The growth of telehealth to deliver care provides an opportunity to explore whether these effects translate to a virtual setting. The primary purpose of this pilot study is to explore the relationships between virtual clinician (VC) characteristics and CRC screening intentions after engagement with a telehealth intervention leveraging technology to deliver tailored CRC prevention messaging., Methods: Using a posttest-only design with three factors (VC race-matching, VC gender, intervention type), participants ( N = 2267) were randomised to one of eight intervention treatments. Participants self-reported perceptions and behavioral intentions., Results: The benefits of matching participants with a racially similar VC trended positive but did not reach statistical significance. Specifically, race-matching positively influenced screening intentions for Black participants but not for Whites ( b = 0.29, p = 0.10). Importantly, perceptions of credibility, attractiveness, and message relevance significantly influenced screening intentions and the relationship with race-matching., Conclusions: To reduce racial CRC screening disparities, investments are needed to identify patient-focused interventions to address structural barriers to screening. This study suggests that telehealth interventions that match Black patients with a Black VC can enhance perceptions of credibility and message relevance, which may then improve screening intentions. Future research is needed to examine how to increase VC credibility and attractiveness, as well as message relevance without race-matching., Competing Interests: No financial disclosures were reported by the authors of this paper., (© The Author(s) 2022.)
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- 2022
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34. Development of a Credible Virtual Clinician Promoting Colorectal Cancer Screening via Telehealth Apps for and by Black Men: Qualitative Study.
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Wilson-Howard D, Vilaro MJ, Neil JM, Cooks EJ, Griffin LN, Ashley TT, Tavassoli F, Zalake MS, Lok BC, Odedina FT, Modave F, Carek PJ, George TJ, and Krieger JL
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Background: Traditionally, promotion of colorectal cancer (CRC) screening among Black men was delivered by community health workers, patient navigators, and decision aids (printed text or video media) at clinics and in the community setting. A novel approach to increase CRC screening of Black men includes developing and utilizing a patient-centered, tailored message delivered via virtual human technology in the privacy of one's home., Objective: The objective of this study was to incorporate the perceptions of Black men in the development of a virtual clinician (VC) designed to deliver precision messages promoting the fecal immunochemical test (FIT) kit for CRC screening among Black men in a future clinical trial., Methods: Focus groups of Black men were recruited to understand their perceptions of a Black male VC. Specifically, these men identified source characteristics that would enhance the credibility of the VC. The modality, agency, interactivity, and navigability (MAIN) model, which examines how interface features affect the user's psychology through four affordances (modality, agency, interactivity, and navigability), was used to assess the presumed credibility of the VC and likability of the app from the focus group transcripts. Each affordance triggers heuristic cues that stimulate a positive or a negative perception of trustworthiness, believability, and understandability, thereby increasing source credibility., Results: In total, 25 Black men were recruited from the community and contributed to the development of 3 iterations of a Black male VC over an 18-month time span. Feedback from the men enhanced the visual appearance of the VC, including its movement, clothing, facial expressions, and environmental surroundings. Heuristics, including social presence, novelty, and authority, were all recognized by the final version of the VC, and creditably was established. The VC was named Agent Leveraging Empathy for eXams (ALEX) and referred to as "brother-doctor," and participants stated "wanting to interact with ALEX over their regular doctor.", Conclusions: Involving Black men in the development of a digital health care intervention is critical. This population is burdened by cancer health disparities, and incorporating their perceptions in telehealth interventions will create awareness of the need to develop targeted messages for Black men., (©Danyell Wilson-Howard, Melissa J Vilaro, Jordan M Neil, Eric J Cooks, Lauren N Griffin, Taylor T Ashley, Fatemeh Tavassoli, Mohan S Zalake, Benjamin C Lok, Folakemi T Odedina, Francois Modave, Peter J Carek, Thomas J George, Janice L Krieger. Originally published in JMIR Formative Research (https://formative.jmir.org), 24.12.2021.)
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- 2021
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35. A Mobile App to Support Self-management of Chronic Kidney Disease: Development Study.
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Markossian TW, Boyda J, Taylor J, Etingen B, Modave F, Price R, and Kramer HJ
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Background: Chronic kidney disease (CKD) is a common and costly condition that is usually accompanied by multiple comorbidities including type 2 diabetes, hypertension, and obesity. Proper management of CKD can delay or prevent kidney failure and help mitigate cardiovascular disease risk, which increases as kidney function declines. Smart device apps hold potential to enhance patient self-management of chronic conditions including CKD., Objective: The objective of this study was to develop a mobile app to facilitate self-management of nondialysis-dependent CKD., Methods: Our stakeholder team included 4 patients with stage 3-4 nondialysis-dependent CKD; a kidney transplant recipient; a caretaker; CKD care providers (pharmacists, a nurse, primary care physicians, a nephrologist, and a cardiologist); 2 health services and CKD researchers; a researcher in biomedical informatics, nutrition, and obesity; a system developer; and 2 programmers. Focus groups and in-person interviews with the patients and providers were conducted using a focus group and interview guide based on existing literature on CKD self-management and the mobile app quality criteria from the Mobile App Rating Scale. Qualitative analytic methods including the constant comparative method were used to analyze the focus group and interview data., Results: Patients and providers identified and discussed a list of requirements and preferences regarding the content, features, and technical aspects of the mobile app, which are unique for CKD self-management. Requirements and preferences centered along themes of communication between patients and caregivers, partnership in care, self-care activities, adherence to treatment regimens, and self-care self-efficacy. These identified themes informed the features and content of our mobile app. The mobile app user can enter health data including blood pressure, weight, and blood glucose levels. Symptoms and their severity can also be entered, and users are prompted to contact a physician as indicated by the symptom and its severity. Next, mobile app users can select biweekly goals from a set of predetermined goals with the option to enter customized goals. The user can also keep a list of medications and track medication use. Our app includes feedback mechanisms where in-range values for health data are depicted in green and out-of-range values are depicted in red. We ensured that data entered by patients could be downloaded into a user-friendly report, which could be emailed or uploaded to an electronic health record. The mobile app also includes a mechanism that allows either group or individualized video chat meetings with a provider to facilitate either group support, education, or even virtual clinic visits. The CKD app also includes educational material on CKD and its symptoms., Conclusions: Patients with CKD and CKD care providers believe that a mobile app can enhance CKD self-management by facilitating patient-provider communication and enabling self-care activities including treatment adherence., (©Talar W Markossian, Jason Boyda, Jennifer Taylor, Bella Etingen, François Modave, Ron Price, Holly J Kramer. Originally published in JMIR Human Factors (https://humanfactors.jmir.org), 15.12.2021.)
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- 2021
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36. Accessing Artificial Intelligence for Clinical Decision-Making.
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Giordano C, Brennan M, Mohamed B, Rashidi P, Modave F, and Tighe P
- Abstract
Advancements in computing and data from the near universal acceptance and implementation of electronic health records has been formative for the growth of personalized, automated, and immediate patient care models that were not previously possible. Artificial intelligence (AI) and its subfields of machine learning, reinforcement learning, and deep learning are well-suited to deal with such data. The authors in this paper review current applications of AI in clinical medicine and discuss the most likely future contributions that AI will provide to the healthcare industry. For instance, in response to the need to risk stratify patients, appropriately cultivated and curated data can assist decision-makers in stratifying preoperative patients into risk categories, as well as categorizing the severity of ailments and health for non-operative patients admitted to hospitals. Previous overt, traditional vital signs and laboratory values that are used to signal alarms for an acutely decompensating patient may be replaced by continuously monitoring and updating AI tools that can pick up early imperceptible patterns predicting subtle health deterioration. Furthermore, AI may help overcome challenges with multiple outcome optimization limitations or sequential decision-making protocols that limit individualized patient care. Despite these tremendously helpful advancements, the data sets that AI models train on and develop have the potential for misapplication and thereby create concerns for application bias. Subsequently, the mechanisms governing this disruptive innovation must be understood by clinical decision-makers to prevent unnecessary harm. This need will force physicians to change their educational infrastructure to facilitate understanding AI platforms, modeling, and limitations to best acclimate practice in the age of AI. By performing a thorough narrative review, this paper examines these specific AI applications, limitations, and requisites while reviewing a few examples of major data sets that are being cultivated and curated in the US., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The reviewer, TL, declared to the editor a past collaboration with the authors, and confirms the absence of ongoing collaborations at the time of the review., (Copyright © 2021 Giordano, Brennan, Mohamed, Rashidi, Modave and Tighe.)
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- 2021
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37. Impact of the Early Phase of the COVID-19 Pandemic on US Healthcare Workers: Results from the HERO Registry.
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Forrest CB, Xu H, Thomas LE, Webb LE, Cohen LW, Carey TS, Chuang CH, Daraiseh NM, Kaushal R, McClay JC, Modave F, Nauman E, Todd JV, Wallia A, Bruno C, Hernandez AF, and O'Brien EC
- Subjects
- Adult, Cross-Sectional Studies, Female, Health Personnel, Humans, Male, Registries, SARS-CoV-2, COVID-19, Pandemics
- Abstract
Background: The HERO registry was established to support research on the impact of the COVID-19 pandemic on US healthcare workers., Objective: Describe the COVID-19 pandemic experiences of and effects on individuals participating in the HERO registry., Design: Cross-sectional, self-administered registry enrollment survey conducted from April 10 to July 31, 2020., Setting: Participants worked in hospitals (74.4%), outpatient clinics (7.4%), and other settings (18.2%) located throughout the nation., Participants: A total of 14,600 healthcare workers., Main Measures: COVID-19 exposure, viral and antibody testing, diagnosis of COVID-19, job burnout, and physical and emotional distress., Key Results: Mean age was 42.0 years, 76.4% were female, 78.9% were White, 33.2% were nurses, 18.4% were physicians, and 30.3% worked in settings at high risk for COVID-19 exposure (e.g., ICUs, EDs, COVID-19 units). Overall, 43.7% reported a COVID-19 exposure and 91.3% were exposed at work. Just 3.8% in both high- and low-risk settings experienced COVID-19 illness. In regression analyses controlling for demographics, professional role, and work setting, the risk of COVID-19 illness was higher for Black/African-Americans (aOR 2.32, 99% CI 1.45, 3.70, p < 0.01) and Hispanic/Latinos (aOR 2.19, 99% CI 1.55, 3.08, p < 0.01) compared with Whites. Overall, 41% responded that they were experiencing job burnout. Responding about the day before they completed the survey, 53% of participants reported feeling tired a lot of the day, 51% stress, 41% trouble sleeping, 38% worry, 21% sadness, 19% physical pain, and 15% anger. On average, healthcare workers reported experiencing 2.4 of these 7 distress feelings a lot of the day., Conclusions: Healthcare workers are at high risk for COVID-19 exposure, but rates of COVID-19 illness were low. The greater risk of COVID-19 infection among race/ethnicity minorities reported in the general population is also seen in healthcare workers. The HERO registry will continue to monitor changes in healthcare worker well-being during the pandemic., Trial Registration: ClinicalTrials.gov identifier NCT04342806.
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- 2021
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38. Application of machine learning to the prediction of postoperative sepsis after appendectomy.
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Bunn C, Kulshrestha S, Boyda J, Balasubramanian N, Birch S, Karabayir I, Baker M, Luchette F, Modave F, and Akbilgic O
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- Adult, Appendectomy methods, Area Under Curve, Disease Susceptibility, Factor Analysis, Statistical, Female, Humans, Male, Middle Aged, Models, Theoretical, Prognosis, Public Health Surveillance, ROC Curve, Appendectomy adverse effects, Machine Learning, Postoperative Complications diagnosis, Postoperative Complications etiology, Sepsis diagnosis, Sepsis etiology
- Abstract
Background: We applied various machine learning algorithms to a large national dataset to model the risk of postoperative sepsis after appendectomy to evaluate utility of such methods and identify factors associated with postoperative sepsis in these patients., Methods: The National Surgery Quality Improvement Program database was used to identify patients undergoing appendectomy between 2005 and 2017. Logistic regression, support vector machines, random forest decision trees, and extreme gradient boosting machines were used to model the occurrence of postoperative sepsis., Results: In the study, 223,214 appendectomies were identified; 2,143 (0.96%) were indicated as having postoperative sepsis. Logistic regression (area under the curve 0.70; 95% confidence interval, 0.68-0.73), random forest decision trees (area under the curve 0.70; 95% confidence interval, 0.68-0.73), and extreme gradient boosting (area under the curve 0.70; 95% confidence interval, 0.68-0.73) afforded similar performance, while support vector machines (area under the curve 0.51; 95% confidence interval, 0.50-0.52) had worse performance. Variable importance analyses identified preoperative congestive heart failure, transfusion, and acute renal failure as predictors of postoperative sepsis., Conclusion: Machine learning methods can be used to predict the development of sepsis after appendectomy with moderate accuracy. Such predictive modeling has potential to ultimately allow for preoperative recognition of patients at risk for developing postoperative sepsis after appendectomy thus facilitating early intervention and reducing morbidity., (Copyright © 2020 Elsevier Inc. All rights reserved.)
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- 2021
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39. Developing and Validating a Computable Phenotype for the Identification of Transgender and Gender Nonconforming Individuals and Subgroups.
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Guo Y, He X, Lyu T, Zhang H, Wu Y, Yang X, Chen Z, Markham MJ, Modave F, Xie M, Hogan W, Harle CA, Shenkman EA, and Bian J
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- Adolescent, Adult, Aged, Aged, 80 and over, Child, Child, Preschool, Female, Hormone Replacement Therapy methods, Humans, Infant, Male, Middle Aged, Phenotype, Reproducibility of Results, Sex Reassignment Procedures, Young Adult, Algorithms, Decision Support Techniques, Electronic Health Records, Gender Identity, Sexual and Gender Minorities psychology, Transgender Persons psychology
- Abstract
Transgender and gender nonconforming (TGNC) individuals face significant marginalization, stigma, and discrimination. Under-reporting of TGNC individuals is common since they are often unwilling to self-identify. Meanwhile, the rapid adoption of electronic health record (EHR) systems has made large-scale, longitudinal real-world clinical data available to research and provided a unique opportunity to identify TGNC individuals using their EHRs, contributing to a promising routine health surveillance approach. Built upon existing work, we developed and validated a computable phenotype (CP) algorithm for identifying TGNC individuals and their natal sex (i.e., male-to-female or female-to-male) using both structured EHR data and unstructured clinical notes. Our CP algorithm achieved a 0.955 F1-score on the training data and a perfect F1-score on the independent testing data. Consistent with the literature, we observed an increasing percentage of TGNC individuals and a disproportionate burden of adverse health outcomes, especially sexually transmitted infections and mental health distress, in this population., (©2020 AMIA - All rights reserved.)
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- 2021
40. mMotiv8: A smartphone-based contingency management intervention to promote smoking cessation.
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Dallery J, Stinson L, Bolívar H, Modave F, Salloum RG, Viramontes TM, and Rohilla P
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- Behavior Therapy, Humans, Motivation, Smoking, Smartphone, Smoking Cessation
- Abstract
Cigarette smoking is the leading preventable cause of death and illness in the United States. We tested the usability, acceptability, and efficacy of a smartphone-based contingency management treatment to promote cessation. We used a nonconcurrent multiple-baseline design. Participants (N = 14) provided breath carbon monoxide (CO) samples by using a CO meter that was connected to the user's smartphone. An app (mMotiv8) housed on participants' smartphones automatically captured pictures of the CO sampling procedure to validate the end user's identity, and it prompted submissions via a push message delivered to participants' smartphones. Participants earned a $10 incentive for daily abstinence, which was added to a reloadable debit card. Overall, 4% of the CO samples were negative during baseline, and 89% were negative during treatment. Self-reported usability and acceptability were high, and 85% of the prompted samples were submitted. A smartphone intervention could be scalable and reduce the health consequences and costs associated with cigarette smoking, particularly in rural and low-income populations., (© 2020 Society for the Experimental Analysis of Behavior.)
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- 2021
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41. Prodromal clinical, demographic, and socio-ecological correlates of asthma in adults: a 10-year statewide big data multi-domain analysis.
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Fishe JN, Bian J, Chen Z, Hu H, Min J, Modave F, and Prosperi M
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- Administrative Claims, Healthcare statistics & numerical data, Adult, Asthma epidemiology, Big Data, Case-Control Studies, Early Diagnosis, Female, Florida epidemiology, Humans, Longitudinal Studies, Male, Middle Aged, ROC Curve, Retrospective Studies, Risk Assessment methods, Risk Assessment statistics & numerical data, Risk Factors, Socioeconomic Factors, Asthma diagnosis, Machine Learning, Models, Biological
- Abstract
Objectives: To identify prodromal correlates of asthma as compared to chronic obstructive pulmonary disease and allied-conditions (COPDAC) using a multi domain analysis of socio-ecological, clinical, and demographic domains. Methods: This is a retrospective case-risk-control study using data from Florida's statewide Healthcare Cost and Utilization Project (HCUP). Patients were grouped into three groups: asthma, COPDAC (without asthma), and neither asthma nor COPDAC. To identify socio-ecological, clinical, demographic, and clinical predictors of asthma and COPDAC, we used univariate analysis, feature ranking by bootstrapped information gain ratio, multivariable logistic regression with LogitBoost selection, decision trees, and random forests. Results: A total of 141,729 patients met inclusion criteria, of whom 56,052 were diagnosed with asthma, 85,677 with COPDAC, and 84,737 with neither asthma nor COPDAC. The multi-domain approach proved superior in distinguishing asthma versus COPDAC and non-asthma/non-COPDAC controls (area under the curve (AUROC) 84%). The best domain to distinguish asthma from COPDAC without controls was prior clinical diagnoses (AUROC 82%). Ranking variables from all the domains found the most important predictors for the asthma versus COPDAC and controls were primarily socio-ecological variables, while for asthma versus COPDAC without controls, demographic and clinical variables such as age, CCI, and prior clinical diagnoses, scored better. Conclusions: In this large statewide study using a machine learning approach, we found that a multi-domain approach with demographics, clinical, and socio-ecological variables best predicted an asthma diagnosis. Future work should focus on integrating machine learning-generated predictive models into clinical practice to improve early detection of those common respiratory diseases.
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- 2020
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42. MicroRNA predicts cognitive performance in healthy older adults.
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Gullett JM, Chen Z, O'Shea A, Akbar M, Bian J, Rani A, Porges EC, Foster TC, Woods AJ, Modave F, and Cohen RA
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- Aged, Aged, 80 and over, Biomarkers blood, Female, Humans, Machine Learning, Male, MicroRNAs physiology, Middle Aged, Predictive Value of Tests, Cognition, Cognitive Aging psychology, MicroRNAs blood, Neurodegenerative Diseases diagnosis, Neurodegenerative Diseases psychology
- Abstract
The expression of microRNA (miRNA) is influenced by ongoing biological processes, including aging, and has begun to play a role in the measurement of neurodegenerative processes in central nervous system. The purpose of this study is to utilize machine learning approaches to determine whether miRNA can be utilized as a blood-based biomarker of cognitive aging. A random forest regression combining miRNA with biological (brain volume), clinical (comorbid conditions), and demographic variables in 115 typically aging older adults explained the greatest level of variance in cognitive performance compared to the other machine learning models explored. Three miRNA (miR-140-5p, miR-197-3p, and miR-501-3p) were top-ranked predictors of multiple cognitive outcomes (Fluid, Crystallized, and Overall Cognition) and past studies of these miRNA link them to cellular senescence, inflammatory signals for atherosclerotic formation, and potential development of neurodegenerative disorders (e.g., Alzheimer's disease). Several novel miRNAs were also linked to age and multiple cognitive functions, findings which together warrant further exploration linking these miRNAs to brain-derived metrics of neurodegeneration in typically aging older adults., (Copyright © 2020 Elsevier Inc. All rights reserved.)
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- 2020
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43. Optimizing identification of resistant hypertension: Computable phenotype development and validation.
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McDonough CW, Babcock K, Chucri K, Crawford DC, Bian J, Modave F, Cooper-DeHoff RM, and Hogan WR
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- Adult, Algorithms, Female, Humans, Phenotype, Reproducibility of Results, Drug Resistance, Electronic Health Records, Hypertension diagnosis, Hypertension drug therapy, Hypertension epidemiology
- Abstract
Purpose: Computable phenotypes are constructed to utilize data within the electronic health record (EHR) to identify patients with specific characteristics; a necessary step for researching a complex disease state. We developed computable phenotypes for resistant hypertension (RHTN) and stable controlled hypertension (HTN) based on the National Patient-Centered Clinical Research Network (PCORnet) common data model (CDM). The computable phenotypes were validated through manual chart review., Methods: We adapted and refined existing computable phenotype algorithms for RHTN and stable controlled HTN to the PCORnet CDM in an adult HTN population from the OneFlorida Clinical Research Consortium (2015-2017). Two independent reviewers validated the computable phenotypes through manual chart review of 425 patient records. We assessed precision of our computable phenotypes through positive predictive value (PPV) and test validity through interrater reliability (IRR)., Results: Among the 156 730 HTN patients in our final dataset, the final computable phenotype algorithms identified 24 926 patients with RHTN and 19 100 with stable controlled HTN. The PPV for RHTN in patients randomly selected for validation of the final algorithm was 99.1% (n = 113, CI: 95.2%-99.9%). The PPV for stable controlled HTN in patients randomly selected for validation of the final algorithm was 96.5% (n = 113, CI: 91.2%-99.0%). IRR analysis revealed a raw percent agreement of 91% (152/167) with Cohen's kappa statistic = 0.87., Conclusions: We constructed and validated a RHTN computable phenotype algorithm and a stable controlled HTN computable phenotype algorithm. Both algorithms are based on the PCORnet CDM, allowing for future application to epidemiological and drug utilization based research., (© 2020 John Wiley & Sons Ltd.)
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- 2020
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44. Simple tests of cardiorespiratory fitness in a pediatric population.
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Bruggeman BS, Vincent HK, Chi X, Filipp SL, Mercado R, Modave F, Guo Y, Gurka MJ, and Bernier A
- Subjects
- Adolescent, Child, Cross-Sectional Studies, Female, Humans, Male, Predictive Value of Tests, Cardiorespiratory Fitness, Cardiovascular Physiological Phenomena, Exercise, Exercise Test methods, Oxygen Consumption
- Abstract
A progressive, treadmill-based VO2max is the gold standard of cardiorespiratory fitness determination but is rarely used in pediatric clinics due to time requirements and cost. Simpler and shorter fitness tests such as the Squat Test or Step Test may be feasible and clinically useful alternatives. However, performance comparisons of these tests to treadmill VO2max tests are lacking. The primary aim of this cross-sectional study was to assess the correlation between Squat and Step Test scores and VO2max in a pediatric population. As secondary outcomes, we calculated correlations between Rated Perceived Exertion Scale (RPE) scores, NIH PROMIS Physical Activity scores, and BMI z-score with VO2max, and we also evaluated the ability of each fitness test to discriminate low and high-risk patients based on the FITNESSGram. Forty children aged 10-17 completed these simple cardiorespiratory fitness tests. Statistically significant correlations were observed between VO2max and the Step Test (r = -0.549) and Squat Test (r = -0.429) scores, as well as participant BMI z-score (r = -0.458). RPE and PROMIS scores were not observed to be correlated with VO2max. Area Under the Receiver Operator Curve was relatively high for BMI z-scores and the Step Test (AUC = 0.813, 0.713 respectively), and lower for the Squat Test (AUC = 0.610) in discriminating risk according to FITNESSGram Scores. In this sample, the Step Test performed best overall. These tests were safe, feasible, and may add great value in assessing cardiorespiratory fitness in a clinical setting., Competing Interests: The authors have declared that no competing interests exist.
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- 2020
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45. Geospatial Analyses of Pain Intensity and Opioid Unit Doses Prescribed on the Day of Discharge Following Orthopedic Surgery.
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Tighe P, Modave F, Horodyski M, Marsik M, Lipori G, Fillingim R, Hu H, and Hagen J
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- Cross-Sectional Studies, Humans, Pain, Postoperative drug therapy, Patient Discharge, Practice Patterns, Physicians', Analgesics, Opioid therapeutic use, Orthopedic Procedures
- Abstract
Objective: Inappropriate opioid prescribing after surgery contributes to opioid use disorder and risk of opioid overdose. In this cross-sectional analysis of orthopedic surgical patients, we examined the role of patient location on postoperative pain intensity and opioids prescribed on hospital discharge., Methods: We used geospatial analyses to characterize spatial patterns of mean pain intensity on the day of discharge (PiDoD) and opioid units prescribed on the day of discharge (OuPoD), as well as the effect of regional social deprivation on these outcomes., Results: At a 500-km radius from the surgery site, the Global Moran's I for PiDoD (2.71 × 10-3, variance = 1.67 × 10-6, P = 0.012) and OuPoD (2.19 × 10-3, SD = 1.87, variance = 1.66 × 10-6, P = 0.03) suggested significant spatial autocorrelation within each outcome. Local indicators of spatial autocorrelation, including local Moran's I, Local Indicator of Spatial Autocorrelation cluster maps, and Getis-Ord Gi* statistics, further demonstrated significant, specific regions of clustering both OuPoD and PiDoD. These spatial patterns were associated with spatial regions of area deprivation., Conclusions: Our results suggest that the outcomes of pain intensity and opioid doses prescribed exhibit varying degrees of clustering of patient locations of residence, at both global and local levels. This indicates that a given patient's pain intensity on discharge is related to the pain intensity of nearby individuals. Similar interpretations exist for OuPoD, although the relative locations of hot spots of opioids dispensed in a geographic area appear to differ from those of hot spots of pain intensity on discharge., (© 2019 American Academy of Pain Medicine. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
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- 2020
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46. Planning for patient-reported outcome implementation: Development of decision tools and practical experience across four clinics.
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Nelson TA, Anderson B, Bian J, Boyd AD, Burton SV, Davis K, Guo Y, Harris BA, Hynes K, Kochendorfer KM, Liebovitz D, Martin K, Modave F, Moses J, Soulakis ND, Weinbrenner D, White SH, Rothrock NE, Valenta AL, and Starren JB
- Abstract
Introduction: Many institutions are attempting to implement patient-reported outcome (PRO) measures. Because PROs often change clinical workflows significantly for patients and providers, implementation choices can have major impact. While various implementation guides exist, a stepwise list of decision points covering the full implementation process and drawing explicitly on a sociotechnical conceptual framework does not exist., Methods: To facilitate real-world implementation of PROs in electronic health records (EHRs) for use in clinical practice, members of the EHR Access to Seamless Integration of Patient-Reported Outcomes Measurement Information System (PROMIS) Consortium developed structured PRO implementation planning tools. Each institution pilot tested the tools. Joint meetings led to the identification of critical sociotechnical success factors., Results: Three tools were developed and tested: (1) a PRO Planning Guide summarizes the empirical knowledge and guidance about PRO implementation in routine clinical care; (2) a Decision Log allows decision tracking; and (3) an Implementation Plan Template simplifies creation of a sharable implementation plan. Seven lessons learned during implementation underscore the iterative nature of planning and the importance of the clinician champion, as well as the need to understand aims, manage implementation barriers, minimize disruption, provide ample discussion time, and continuously engage key stakeholders., Conclusions: Highly structured planning tools, informed by a sociotechnical perspective, enabled the construction of clear, clinic-specific plans. By developing and testing three reusable tools (freely available for immediate use), our project addressed the need for consolidated guidance and created new materials for PRO implementation planning. We identified seven important lessons that, while common to technology implementation, are especially critical in PRO implementation., (© The Association for Clinical and Translational Science 2020.)
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- 2020
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47. Assessing the effect of data integration on predictive ability of cancer survival models.
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Guo Y, Bian J, Modave F, Li Q, George TJ, Prosperi M, and Shenkman E
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- Female, Humans, Male, Medicare statistics & numerical data, Prognosis, Survival Rate, United States, Breast Neoplasms, Models, Statistical, Neoplasms
- Abstract
Cancer is the second leading cause of death in the United States. To improve cancer prognosis and survival rates, a better understanding of multi-level contributory factors associated with cancer survival is needed. However, prior research on cancer survival has primarily focused on factors from the individual level due to limited availability of integrated datasets. In this study, we sought to examine how data integration impacts the performance of cancer survival prediction models. We linked data from four different sources and evaluated the performance of Cox proportional hazard models for breast, lung, and colorectal cancers under three common data integration scenarios. We showed that adding additional contextual-level predictors to survival models through linking multiple datasets improved model fit and performance. We also showed that different representations of the same variable or concept have differential impacts on model performance. When building statistical models for cancer outcomes, it is important to consider cross-level predictor interactions.
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- 2020
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48. The rapid growth of intelligent systems in health and health care.
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Bian J and Modave F
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- Big Data, Humans, Delivery of Health Care trends, Health Facilities statistics & numerical data, Health Facilities trends
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- 2020
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49. Development and application of a high throughput natural language processing architecture to convert all clinical documents in a clinical data warehouse into standardized medical vocabularies.
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Afshar M, Dligach D, Sharma B, Cai X, Boyda J, Birch S, Valdez D, Zelisko S, Joyce C, Modave F, and Price R
- Subjects
- Data Mining methods, Electronic Health Records, Humans, Patient Readmission, Machine Learning, Natural Language Processing, Unified Medical Language System, Vocabulary, Controlled
- Abstract
Objective: Natural language processing (NLP) engines such as the clinical Text Analysis and Knowledge Extraction System are a solution for processing notes for research, but optimizing their performance for a clinical data warehouse remains a challenge. We aim to develop a high throughput NLP architecture using the clinical Text Analysis and Knowledge Extraction System and present a predictive model use case., Materials and Methods: The CDW was comprised of 1 103 038 patients across 10 years. The architecture was constructed using the Hadoop data repository for source data and 3 large-scale symmetric processing servers for NLP. Each named entity mention in a clinical document was mapped to the Unified Medical Language System concept unique identifier (CUI)., Results: The NLP architecture processed 83 867 802 clinical documents in 13.33 days and produced 37 721 886 606 CUIs across 8 standardized medical vocabularies. Performance of the architecture exceeded 500 000 documents per hour across 30 parallel instances of the clinical Text Analysis and Knowledge Extraction System including 10 instances dedicated to documents greater than 20 000 bytes. In a use-case example for predicting 30-day hospital readmission, a CUI-based model had similar discrimination to n-grams with an area under the curve receiver operating characteristic of 0.75 (95% CI, 0.74-0.76)., Discussion and Conclusion: Our health system's high throughput NLP architecture may serve as a benchmark for large-scale clinical research using a CUI-based approach., (© The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com.)
- Published
- 2019
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50. Understanding Perceptions and Attitudes in Breast Cancer Discussions on Twitter.
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Modave F, Zhao Y, Krieger J, He Z, Guo Y, Huo J, Prosperi M, and Bian J
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- Attitude, Data Collection, Female, Humans, Breast Neoplasms, Social Media
- Abstract
Among American women, the rate of breast cancer is only second to lung cancer. An estimated 12.4% women will develop breast cancer over the course of their lifetime. The widespread use of social media across the socio-economic spectrum offers unparalleled ways to facilitate information sharing, in particular as it pertains to health. Social media is also used by many healthcare stakeholders, ranging from government agencies to healthcare industry, to disseminate health information and to engage patients. The purpose of this study is to investigate people's perceptions and attitudes related to breast cancer, especially those that are related to physical activities, on Twitter. To achieve this, we first identified and collected tweets related to breast cancer; and then used topic modeling and sentiment analysis techniques to understand discussion themes and quantify Twitter users' perceptions and emotions with respect tobreast cancer to answer 5 research questions.
- Published
- 2019
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