420 results on '"Mistchenko AS"'
Search Results
2. Long-term antibody response following SPUTNIK V primary vaccination in healthcare workers with and without history of SARS-CoV-2 infection: Prospective cohort study from a hospital in Argentina
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Gentile, A., Castellano, V.E., Pacchiotti, A., Weinberger, N., Diana Menéndez, S., del Pino, M., Carciofi, G., Lamy, P., and Mistchenko, A.S.
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- 2022
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3. The Lambda Variant in Argentina: Analyzing the Evolution and Spread of SARS-CoV-2 Lineage C.37
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Mercedes Soledad Nabaes Jodar, Carolina Torres, Laura Mojsiejczuk, Dolores Acuña, Laura Elena Valinotto, Stephanie Goya, Monica Natale, Silvina Lusso, Sofia Alexay, Ariel Amadio, Matias Irazoqui, Franco Fernandez, Maria Elina Acevedo, Cristina Alvarez Lopez, Andres Angelletti, Paula Aulicino, Elisa Bolatti, Bettina Brusés, Marco Cacciahue, Ana Cavatorta, Agustina Cerri, Andres Cordero, Humberto Debat, Maria Jose Dus Santos, Maria Florencia Eberhardt, Regina Ercole, Carlos Espul, Marisa Farber, Fabián Fay, Ailen Fernandez, Florencia Ferrini, Laura Formichelli, Santiago Ceballos, Fernando Gallego, Adriana Giri, Maria Gismondi, Raul Maximiliano Acevedo, Ivan Gramundi, María Eugenia Ibañez, Guido Konig, Viviana Leiva, Melina Lorenzini Campos, Horacio Lucero, Nathalie Marquez, Melina Mazzeo, Alicia Susana Mistchenko, Luciana Montoto, Marianne Muñoz, Victoria Nadalich, Cristina Nardi, Belén Ortiz, Luis Pianciola, Carolina Pintos, Andrea Puebla, Carolina Rastellini, Alejandro Ezequiel Rojas, Javier Sfalcin, Ariel Suarez, Clara Theaux, Guillermo Thomas, Estefania Tittarelli, Rosana Toro, Vanina Villanova, Gretel Wenk, Cecilia Ziehm, Maria Carla Zimmermann, Sebastian Zunino, Proyecto PAIS, and Mariana Viegas
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SARS-CoV-2 ,Lambda ,variants ,evolution ,South America ,phylodynamic ,Microbiology ,QR1-502 - Abstract
The second wave of COVID-19 occurred in South America in early 2021 and was mainly driven by Gamma and Lambda variants. In this study, we aimed to describe the emergence and local genomic diversity of the SARS-CoV-2 Lambda variant in Argentina, from its initial entry into the country until its detection ceased. Molecular surveillance was conducted on 9356 samples from Argentina between October 2020 and April 2022, and sequencing, phylogenetic, and phylogeographic analyses were performed. Our findings revealed that the Lambda variant was first detected in Argentina in January 2021 and steadily increased in frequency until it peaked in April 2021, with continued detection throughout the year. Phylodynamic analyses showed that at least 18 introductions of the Lambda variant into the country occurred, with nine of them having evidence of onward local transmission. The spatial–-temporal reconstruction showed that Argentine clades were associated with Lambda sequences from Latin America and suggested an initial diversification in the Metropolitan Area of Buenos Aires before spreading to other regions in Argentina. Genetic analyses of genome sequences allowed us to describe the mutational patterns of the Argentine Lambda sequences and detect the emergence of rare mutations in an immunocompromised patient. Our study highlights the importance of genomic surveillance in identifying the introduction and geographical distribution of the SARS-CoV-2 Lambda variant, as well as in monitoring the emergence of mutations that could be involved in the evolutionary leaps that characterize variants of concern.
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- 2023
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4. Pre-vaccine rotavirus surveillance in Buenos Aires, Argentina. Characterization of an emergent G1P[8] strain associated to fatal cases in 2014
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Mandile, Marcelo G., Argüelles, Marcelo H., Temprana, Carlos F., Peri Ibáñez, Estefanía S., Silvestre, Dalila, Musto, Alejandra, Rodríguez Pérez, Alberto, Mistchenko, Alicia, Glikmann, Graciela, and Castello, Alejandro A.
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- 2020
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5. Acute Flaccid Myelitis Associated with Enterovirus D68 in Children, Argentina, 2016
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Carolina M. Carballo, Marcela García Erro, Nora Sordelli, Gabriel Vazquez, Alicia S. Mistchenko, Claudia Cejas, Manlio Rodriguez, Daniel M. Cisterna, Maria Cecilia Freire, Maria M. Contrini, and Eduardo L. Lopez
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enterovirus ,infectious disease outbreaks ,myelitis ,children ,acute flaccid myelitis ,Argentina ,Medicine ,Infectious and parasitic diseases ,RC109-216 - Abstract
After a 2014 outbreak of severe respiratory illness caused by enterovirus D68 in the United States, sporadic cases of acute flaccid myelitis have been reported worldwide. We describe a cluster of acute flaccid myelitis cases in Argentina in 2016, adding data to the evidence of association between enterovirus D68 and this polio-like illness.
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- 2019
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6. Nepticulidae from the Volga and Ural Region
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Van Nieukerken, Erik J, Zolotuhin, Vadim V, Mistchenko, Andrey, and BioStor
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- 2004
7. Measles Resurgence in Argentina: 1997-8 Outbreak
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Bilkis, M. D., Barrero, P. R., and Mistchenko, A. S.
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- 2000
8. The Lambda Variant in Argentina: Analyzing the Evolution and Spread of SARS-CoV-2 Lineage C.37
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Nabaes Jodar, Mercedes Soledad, primary, Torres, Carolina, additional, Mojsiejczuk, Laura, additional, Acuña, Dolores, additional, Valinotto, Laura Elena, additional, Goya, Stephanie, additional, Natale, Monica, additional, Lusso, Silvina, additional, Alexay, Sofia, additional, Amadio, Ariel, additional, Irazoqui, Matias, additional, Fernandez, Franco, additional, Acevedo, Maria Elina, additional, Alvarez Lopez, Cristina, additional, Angelletti, Andres, additional, Aulicino, Paula, additional, Bolatti, Elisa, additional, Brusés, Bettina, additional, Cacciahue, Marco, additional, Cavatorta, Ana, additional, Cerri, Agustina, additional, Cordero, Andres, additional, Debat, Humberto, additional, Dus Santos, Maria Jose, additional, Eberhardt, Maria Florencia, additional, Ercole, Regina, additional, Espul, Carlos, additional, Farber, Marisa, additional, Fay, Fabián, additional, Fernandez, Ailen, additional, Ferrini, Florencia, additional, Formichelli, Laura, additional, Ceballos, Santiago, additional, Gallego, Fernando, additional, Giri, Adriana, additional, Gismondi, Maria, additional, Acevedo, Raul Maximiliano, additional, Gramundi, Ivan, additional, Ibañez, María Eugenia, additional, Konig, Guido, additional, Leiva, Viviana, additional, Lorenzini Campos, Melina, additional, Lucero, Horacio, additional, Marquez, Nathalie, additional, Mazzeo, Melina, additional, Mistchenko, Alicia Susana, additional, Montoto, Luciana, additional, Muñoz, Marianne, additional, Nadalich, Victoria, additional, Nardi, Cristina, additional, Ortiz, Belén, additional, Pianciola, Luis, additional, Pintos, Carolina, additional, Puebla, Andrea, additional, Rastellini, Carolina, additional, Rojas, Alejandro Ezequiel, additional, Sfalcin, Javier, additional, Suarez, Ariel, additional, Theaux, Clara, additional, Thomas, Guillermo, additional, Tittarelli, Estefania, additional, Toro, Rosana, additional, Villanova, Vanina, additional, Wenk, Gretel, additional, Ziehm, Cecilia, additional, Zimmermann, Maria Carla, additional, Zunino, Sebastian, additional, PAIS, Proyecto, additional, and Viegas, Mariana, additional
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- 2023
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9. Sixteen years of evolution of human respiratory syncytial virus subgroup A in Buenos Aires, Argentina: GA2 the prevalent genotype through the years
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Viegas, M., Goya, S., and Mistchenko, A.S.
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- 2016
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10. Phylogenetic and molecular analyses of human parainfluenza type 3 virus in Buenos Aires, Argentina, between 2009 and 2013: The emergence of new genetic lineages
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Goya, Stephanie, Mistchenko, Alicia Susana, and Viegas, Mariana
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- 2016
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11. COVID-19 in Children: Correlation Between Epidemiologic, Clinical Characteristics, and RT-qPCR Cycle Threshold Values
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Angela, Gentile, María Del Valle, Juarez, María Florencia, Lucion, María Natalia, Pejito, Sofia, Alexay, Ana Sofia, Orqueda, Lucia Romero, Bollon, and Alicia, Mistchenko
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Microbiology (medical) ,COVID-19 Testing ,Cross-Sectional Studies ,Infectious Diseases ,Adolescent ,SARS-CoV-2 ,Pediatrics, Perinatology and Child Health ,COVID-19 ,Humans ,Viral Load ,Child - Abstract
Initially, the impact of SARS-CoV-2 infection on children was unknown. Standard COVID-19 diagnosis is confirmed using real-time qPCR. Cycle threshold (Ct) values of RT-qPCR are inversely proportional to viral load and the test indirectly quantifies viral RNA copy numbers. The objective of this study was to determine the correlation between epidemiology, clinical characteristics, severity of confirmed COVID-19 cases, and Ct values.An observational, analytical, cross-sectional study. All children with COVID-19 under 18 years old admitted to the Ricardo Gutiérrez Children's Hospital between March 1, 2020, and February 28, 2021, were included. SARS-CoV-2 infection was confirmed using RT-qPCR.Median age of patients was 7 years. Ct values were estimated in 419 cases, median Ct value was 23.5 [interquartile range (IQR): 18.9-30.9]. Levels were significantly lower in symptomatic than asymptomatic patients (Ct: 22.1; IQR: 18.4-22.1), in children2 years of age (Ct: 20.6; IQR: 17.3-27.3) and when sample collection was4 days after symptom onset (Ct: 21.1; IQR: 18.1-27.5). In children2 years of age, Ct values were significantly lower in symptomatic (Ct: 22.6; IQR: 18.7-29.3) than asymptomatic (Ct: 31.2; IQR: 24.5-33.3) patients.Children younger than 2 years with COVID-19 have lower values of Ct-as a proxy for higher viral load-than older children. Symptomatic children over 2 years of age had lower Ct values compared with asymptomatic children.
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- 2022
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12. Burden of Respiratory Syncytial Virus Disease and Mortality Risk Factors in Argentina: 18 Years of Active Surveillance in a Children’s Hospital
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Gentile, Angela, Lucion, María Florencia, Juarez, María del Valle, Areso, María Soledad, Bakir, Julia, Viegas, Mariana, and Mistchenko, Alicia
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- 2019
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13. Peculiarities of the foreign dental students’ teaching the topic “Oral cavity physiology”
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Mistchenko, Igor’ Vitaliyevich, Tkachenko, Elena Viktorovna, Zhukova, Marina Yuriyevna, Kokovskaya, Oksana Valeriyevna, Jha, Sahil Kumar, Mistchenko, Igor’ Vitaliyevich, Tkachenko, Elena Viktorovna, Zhukova, Marina Yuriyevna, Kokovskaya, Oksana Valeriyevna, and Jha, Sahil Kumar
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Assessing the typological belonging taking into consideration represents informative research area in the theoretical and applied branches of Science. Ethnic, gender, age and mixed typological aspects such as gender-age, ethno-gender-age, temperament, interhemispherical asymmetry individual profile, control locus, behavioral strategies, character accentuations and constitution types are the most known and used in research among them. Students represent separate age category, if the examined are foreigners – ethno-age typological aspect is taken into consideration, if male and female foreign students are in the research groups – they say and they write about ethno-gender-age typological aspect.
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- 2023
14. More expressed intra- and interdisciplinary integration applying during the educative process with the foreign applicants
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Mistchenko, I. V., Zhukova, M. Y., Tkachenko, O. V., Mistchenko, I. V., Zhukova, M. Y., and Tkachenko, O. V.
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Foreign applicants prefer using the intra-disciplinary and inter-disciplinary integration much more often and in much more significant extent comparatively to the domestic ones. Conjugative reflexes between separate organism systems, particularly between the cardiovascular and the respiratory one must be taken into obligatory consideration. The authors paid and pay much attention at our lessons in the foreign groups to describing the common defensive system including non-specific and specific humoral and cellular mechanisms, inflammation system, kallikrein-kinine system, antioxidative system, vascular-platelet (primary, microcirculative) hemostasis, coagulational (secondary, blood coagulation) hemostasis, primary and secondary anticoagulants, fibrinolytic system, particularly in Dentistry. The representation about hypothalamic-hypophyseal-suprarenal system was widened till hypothalamic-hypophyseal-suprarenal-gonadal-pancreatic. The article contains description of interconnections between hemostasis, inflammation, pain reactions as well as the ones of vascular tone regulating, neuroendocrine-immune interactions, in part, cytokines and cytomedines role in the organism under physiological and pathological conditions.
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- 2023
15. Evolutionary dynamics of respiratory syncytial virus in Buenos Aires: Viral diversity, migration, and subgroup replacement
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Stephanie Goya, Maria Florencia Lucion, Meghan H Shilts, María del Valle Juárez, Angela Gentile, Alicia S Mistchenko, Mariana Viegas, and Suman R Das
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Virology ,Microbiology - Abstract
Globally, the human respiratory syncytial virus (RSV) is one of the major causes of lower respiratory tract infections (LRTIs) in children. The scarcity of complete genome data limits our understanding of RSV spatiotemporal distribution, evolution, and viral variant emergence. Nasopharyngeal samples collected from hospitalized pediatric patients from Buenos Aires tested positive for RSV LRTI during four consecutive outbreaks (2014–2017) were randomly subsampled for RSV complete genome sequencing. Phylodynamic studies and viral population characterization of genomic variability, diversity, and migration of viruses to and from Argentina during the study period were performed. Our sequencing effort resulted in one of the largest collections of RSV genomes from a given location (141 RSV-A and 135 RSV-B) published so far. RSV-B was dominant during the 2014–2016 outbreaks (60 per cent of cases) but was abruptly replaced by RSV-A in 2017, with RSV-A accounting for 90 per cent of sequenced samples. A significant decrease in RSV genomic diversity—represented by both a reduction in genetic lineages detected and the predominance of viral variants defined by signature amino acids—was observed in Buenos Aires in 2016, the year prior to the RSV subgroup predominance replacement. Multiple introductions to Buenos Aires were detected, some with persistent detection over seasons, and also, RSV was observed to migrate from Buenos Aires to other countries. Our results suggest that the decrease in viral diversity may have allowed the dramatic predominance switch from RSV-B to RSV-A in 2017. The immune pressure generated against circulating viruses with limited diversity during a given outbreak may have created a fertile ground for an antigenically divergent RSV variant to be introduced and successfully spread in the subsequent outbreak. Overall, our RSV genomic analysis of intra- and inter-outbreak diversity provides an opportunity to better understand the epochal evolutionary dynamics of RSV.
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- 2023
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16. Evolutionary dynamics of respiratory syncytial virus in Buenos Aires: viral diversity, migration, and subgroup replacement
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Goya, Stephanie, primary, Lucion, Maria Florencia, additional, Shilts, Meghan H, additional, del Valle Juárez, María, additional, Gentile, Angela, additional, Mistchenko, Alicia S, additional, Viegas, Mariana, additional, and Das, Suman R, additional
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- 2023
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17. An optimized methodology for whole genome sequencing of RNA respiratory viruses from nasopharyngeal aspirates.
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Stephanie Goya, Laura E Valinotto, Estefania Tittarelli, Gabriel L Rojo, Mercedes S Nabaes Jodar, Alexander L Greninger, Jonathan J Zaiat, Marcelo A Marti, Alicia S Mistchenko, and Mariana Viegas
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Medicine ,Science - Abstract
Over the last decade, the number of viral genome sequences deposited in available databases has grown exponentially. However, sequencing methodology vary widely and many published works have relied on viral enrichment by viral culture or nucleic acid amplification with specific primers rather than through unbiased techniques such as metagenomics. The genome of RNA viruses is highly variable and these enrichment methodologies may be difficult to achieve or may bias the results. In order to obtain genomic sequences of human respiratory syncytial virus (HRSV) from positive nasopharyngeal aspirates diverse methodologies were evaluated and compared. A total of 29 nearly complete and complete viral genomes were obtained. The best performance was achieved with a DNase I treatment to the RNA directly extracted from the nasopharyngeal aspirate (NPA), sequence-independent single-primer amplification (SISPA) and library preparation performed with Nextera XT DNA Library Prep Kit with manual normalization. An average of 633,789 and 1,674,845 filtered reads per library were obtained with MiSeq and NextSeq 500 platforms, respectively. The higher output of NextSeq 500 was accompanied by the increasing of duplicated reads percentage generated during SISPA (from an average of 1.5% duplicated viral reads in MiSeq to an average of 74% in NextSeq 500). HRSV genome recovery was not affected by the presence or absence of duplicated reads but the computational demand during the analysis was increased. Considering that only samples with viral load ≥ E+06 copies/ml NPA were tested, no correlation between sample viral loads and number of total filtered reads was observed, nor with the mapped viral reads. The HRSV genomes showed a mean coverage of 98.46% with the best methodology. In addition, genomes of human metapneumovirus (HMPV), human rhinovirus (HRV) and human parainfluenza virus types 1-3 (HPIV1-3) were also obtained with the selected optimal methodology.
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- 2018
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18. Influenza virus: 16 years' experience of clinical epidemiologic patterns and associated infection factors in hospitalized children in Argentina.
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Angela Gentile, Maria Florencia Lucion, Maria Del Valle Juarez, Ana Clara Martinez, Viviana Romanin, Julia Bakir, Mariana Viegas, and Alicia Mistchenko
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Medicine ,Science - Abstract
Influenza is an important cause of acute lower respiratory tract infection (aLRTI), hospitalization, and mortality in children. This study aimed to describe the clinical and epidemiologic patterns and infection factors associated with influenza, and compare case features of influenza A and B.In a prospective, cross-sectional study, patients admitted for aLRTI, between 2000 and 2015, were tested for respiratory syncytial virus, adenovirus, influenza, or parainfluenza, and confirmed by fluorescent antibody (FA) or real-time polymerase chain reaction (RT-PCR) assay of nasopharyngeal aspirates.Of 14,044 patients, 37.7% (5290) had FA- or RT-PCR-confirmed samples that identified influenza in 2.8% (394/14,044; 91.4% [360] influenza A, 8.6% [34] influenza B) of cases. Influenza frequency followed a seasonal epidemic pattern (May-July, the lowest average temperature months). The median age of cases was 12 months (interquartile range: 6-21 months); 56.1% (221/394) of cases were male. Consolidated pneumonia was the most frequent clinical presentation (56.9%; 224/394). Roughly half (49.7%; 196/394) of all cases had previous respiratory admissions; 9.4% (37/394) were re-admissions; 61.5% (241/392) had comorbidities; 26.2% (102/389) had complications; 7.8% (30/384) had nosocomial infections. The average case fatality rate was 2.1% (8/389). Chronic neurologic disease was significantly higher in influenza B cases compared to influenza A cases (p = 0.030). The independent predictors for influenza were: age ≥6 months, odds ratio (OR): 1.88 (95% confidence interval [CI]: 1.44-2.45); p
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- 2018
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19. Severe acute respiratory syndrome coronavirus 2019. Seroepidemiology study in Argentinian slum
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Silvana, Figar, Vanina, Pagotto, Lorena, Luna, Julieta, Salto, Magdalena, Wagner Manslau, Alicia S, Mistchenko, Andrea, Gamarnik, Ana María, Gómez Saldaño, and Fernán, González Bernaldo de Quirós
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SARS-CoV-2 ,covid 19 ,seroepidemiologic studies ,COVID-19 ,Infectious and parasitic diseases ,RC109-216 ,RC581-607 ,Antibodies, Viral ,poverty areas ,Humans ,RNA, Viral ,Medicine ,Immunologic diseases. Allergy - Abstract
Most countries in Latin America have already reported thousands of confirmed cases and vulnerable populations are the most affected by the coronavirus disease 2019 (COVID-19) pandemic. Preventive measures such as hygiene, social distancing, and isolation, essential to stop the spread of coronavirus, are difficult to accomplish for vulnerable populations due to their living conditions. Seroepidemiological surveys are assets to measure the transmission for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Until July 1st, the incidence rate of SARS-CoV-2 infection in Barrio Padre Mugica, one of the largest slums in Buenos Aires City, was 5.9%. This study aimed to establish the prevalence of SARS-CoV-2 antibodies immunoglobulin G (IgG) immediately after the outbreak, and to identify neighbourhood, household and individual factors associated with seroconversion. The prevalence based on IgG was 53.4% (95% CI 52.8% to 54.1%). For each polymerase chain reaction (RT-qPCR) confirmed case, nine people tested IgG positive, indicating a high rate of undetected (probably asymptomatic) infections. Hence, the high rate of undiagnosed people suggests that clinical criteria and epidemiological nexus should be considered. The high seroprevalence observed in the context of an intense epidemic in a vulnerable area might serve as a reference to other countries. This study contributes to future decision making by understanding population immunity against SARS-CoV2 and its relation to living conditions and foccus that comprehensive biosocial, household-level interventions are needed.Muchos países de América Latina han informado miles de casos confirmados y las poblaciones vulnerables son las más afectadas por la pandemia de la enfermedad por coronavirus 2019 (COVID-19). Las medidas preventivas como la higiene, el distanciamiento social y el aislamiento, fundamentales para frenar la propagación del coronavirus, son difíciles de lograr en estas poblaciones debido a sus condiciones de vida. Los estudios seroepidemiológicos son de gran utilidad para medir la transmisión del síndrome respiratorio agudo severo coronavirus 2 (SARS-CoV-2). Hasta el 1 de julio, la tasa de incidencia de la infección por SARS-CoV-2 en el Barrio Padre Mugica, uno de los barrios marginales más grandes de la ciudad de Buenos Aires, era del 5.9%. Este estudio tuvo como objetivo estimar la prevalencia de anticuerpos inmunoglobulina G (IgG) para SARS-CoV-2 inmediatamente después del brote, e identificar factores del barrio, hogar e individuales asociados con la seroconversión. La prevalencia basada en IgG fue del 53.4% (IC del 95%: 52.8% a 54.1%). Para cada caso confirmado por reacción en cadena de la polimerasa (RT-qPCR), nueve personas dieron positivo en IgG, lo que indica una alta tasa de infecciones no detectadas y probablemente asintomáticas. La alta tasa de personas no diagnosticadas sugiere que se deben considerar los criterios clínicos y el nexo epidemiológico. La alta seroprevalencia observada en el contexto de una intensa epidemia en una zona vulnerable podría servir de referencia a otros países. Este estudio contribuye a la toma de decisiones futuras al comprender la inmunidad de la población contra el SARS-CoV2 en su relación con las condiciones de vida y por su enfoque en la necesidad de intervenciones integrales a nivel del hogar.
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- 2021
20. Analysis of COL7A1 pathogenic variants in a large cohort of dystrophic epidermolysis bullosa patients from Argentina reveals a new genotype-phenotype correlation
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Mónica Inés Natale, Graciela Beatriz Manzur, Silvina Beatriz Lusso, Eliana Cella, María Elsa Giovo, Romina Andrada, Juana Goitia, María Florencia Fernández, Patricia Silvia Della Giovanna, María José Guillamondegui, Mariángeles Domínguez, Olga Gutiérrez, Agustín Izquierdo, Heliana Hernández Herrera, Luz Graciela Velázquez Perdomo, Alicia Susana Mistchenko, and Laura Elena Valinotto
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Collagen Type VII ,Phenotype ,Mutation ,Genetics ,Argentina ,Humans ,Genetics (clinical) ,Genetic Association Studies ,Epidermolysis Bullosa Dystrophica - Abstract
Dystrophic epidermolysis bullosa (DEB) is a clinically heterogeneous heritable skin disorder, characterized by blistering of the skin and mucous membranes following minor trauma. Dominant (DDEB) and recessive (RDEB) forms are caused by pathogenic variants in COL7A1 gene. Argentina's population has a heterogeneous genetic background, and little is known about the molecular basis of DEB in our country or in native South American populations. In this study, we present the prevalence and geographical distribution of pathogenic variants found in 181 patients from 136 unrelated families (31 DDEB and 105 RDEB). We detected 95 different variants, 59 of them were previously reported in the literature and 36 were novel, nine of which were detected in more than one family. The most prevalent pathogenic variants were identified in exon 73 in DDEB patients and in exon 3 in RDEB patients. We also report a new phenotype-genotype correlation found in 10 unrelated families presenting mild blistering and severe mucosal involvement. Molecular studies in populations with an unexplored genetic background like ours revealed a diversity of pathogenic variants, and we hope that these findings will contribute to the definition of targets for new gene therapies.
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- 2022
21. Molecular typing of adenoviruses in pediatric respiratory infections in Buenos Aires, Argentina (1999–2010)
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Barrero, P.R., Valinotto, L.E., Tittarelli, E., and Mistchenko, A.S.
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- 2012
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22. Analysis ofCOL7A1pathogenic variants in a large cohort of dystrophic epidermolysis bullosa patients from Argentina reveals a new genotype–phenotype correlation
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Natale, Mónica Inés, primary, Manzur, Graciela Beatriz, additional, Lusso, Silvina Beatriz, additional, Cella, Eliana, additional, Giovo, María Elsa, additional, Andrada, Romina, additional, Goitia, Juana, additional, Fernández, María Florencia, additional, Della Giovanna, Patricia Silvia, additional, Guillamondegui, María José, additional, Domínguez, Mariángeles, additional, Gutiérrez, Olga, additional, Izquierdo, Agustín, additional, Hernández Herrera, Heliana, additional, Velázquez Perdomo, Luz Graciela, additional, Mistchenko, Alicia Susana, additional, and Valinotto, Laura Elena, additional
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- 2022
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23. COVID-19 in Children: Correlation Between Epidemiologic, Clinical Characteristics, and RT-qPCR Cycle Threshold Values
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Gentile, Angela, primary, Juarez, María del Valle, additional, Lucion, María Florencia, additional, Pejito, María Natalia, additional, Alexay, Sofia, additional, Orqueda, Ana Sofia, additional, Bollon, Lucia Romero, additional, and Mistchenko, Alicia, additional
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- 2022
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24. Impacto del COVID-19 en la circulación de virus respiratorios en un hospital pediátrico: una ausencia esperada
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Lucion, M. Florencia, Juárez, M. del Valle, Pejit, M. Natalia, Orqueda, Ana S., Bollón, Lucía Romero, Mistchenko, Alicia S., and Gentile, Ángela
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vigilancia epidemiológica ,COVID-19 ,virus ,bronquiolitis ,infecciones respiratorias - Abstract
RESUMEN Introducción . Los virus respiratorios son la principal causa de infección respiratoria aguda baja (IRAB) en la población pediátrica. En marzo de 2020, la Organización Mundial de la Salud declaró el estado de pandemia de la enfermedad por el nuevo coronavirus 2019 (COVID-19) con un impacto global elevado. El objetivo de este estudio fue describir el impacto de la pandemia de COVID-19 en las internaciones por IRAB en el Hospital de Niños Ricardo Gutiérrez (HNRG) y la circulación viral. Métodos . Estudio observacional, retrospectivo y descriptivo de pacientes internados por IRAB, comparando los años 2019 y 2020. Resultados . En 2020, la tasa de hospitalización por IRAB se redujo un 73 % en el HNRG (575,1/10 000 en 2019 y 155,3/10 000 en2020). En 2019 se internaron 517 pacientes con IRAB; en 174 se identificaron los virus: sincicial respiratorio (71,2 %), adenovirus (AV) (10,3 %), parainfluenza (PIF) (9,7 %) e influenza (FLU) (8,6 %). En 2020, se hospitalizaron 94 pacientes con IRAB. Hasta la semana epidemiológica (SE) 13 se registraron casos de IRAB por PIF y AV; en la SE 29 un caso de bronquiolitis por AV y rinovirus (RV), seguido de casos aislados de RV; no hubo IRAB por VSR ni por FLU. Se registraron 9 casos de IRAB por COVID-19: 2 bronquiolitis moderadas y 7 neumonías focales; con un adolescente fallecido por neumonía por COVID-19 con comorbilidades. En 2020, los casos presentaron mayor edad, más comorbilidades e internaciones previas en comparación con el 2019. La neumonía focal fue la presentación clínica predominante. Conclusión. En 2020, la tasa de hospitalización por IRAB se redujo significativamente en comparación con el año anterior, con ausencia de circulación de virus respiratorios estacionales en la población asistida en nuestro centro.
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- 2022
25. RSV reemergence in Argentina since the SARS-CoV-2 pandemic
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Dolores, Acuña, Stephanie, Goya, Mercedes S, Nabaes Jodar, Érica, Grandis, Mistchenko, Alicia S, and Mariana, Viegas
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- 2022
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26. Dengue Virus 1 Outbreak in Buenos Aires, Argentina, 2016
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Estefanía Tittarelli, Silvina B. Lusso, Stephanie Goya, Gabriel L. Rojo, Mónica I. Natale, Mariana Viegas, Alicia S. Mistchenko, and Laura E. Valinotto
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Dengue virus ,phylogeny ,Argentina ,genotype V ,2016 outbreak ,Buenos Aires ,Medicine ,Infectious and parasitic diseases ,RC109-216 - Abstract
The largest outbreak of dengue in Buenos Aires, Argentina, occurred during 2016. Phylogenetic, phylodynamic, and phylogeographic analyses of 82 samples from dengue patients revealed co-circulation of 2 genotype V dengue virus lineages, suggesting that this virus has become endemic to the Buenos Aires metropolitan area.
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- 2017
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27. Agreement between diagnostic methods for SARS-CoV-2 infection in children seen at the Emergency Department of a children's hospital
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Patricia, Stach, Ana M, Nieva, Alicia S, Mistchenko, Viviana A, Osta, Ezequiel, Monteverde, Miriam, Peralta, Mariana, Nana, Andrea L, Borrego, María C, Álvarez, and Jorge A, Fiorentino
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COVID-19 Testing ,SARS-CoV-2 ,COVID-19 ,Humans ,Child ,Emergency Service, Hospital ,Hospitals, Pediatric ,Sensitivity and Specificity ,United States - Abstract
Rapid antigen tests (RAgTs) for SARS-CoV-2 are considered adequate for diagnosis at the point of care. Our objective was to establish the agreement between reverse transcription-quantitative polymerase chain reaction (RT-qPCR) and RAgTs in the pediatric population.All patients aged 1 month to 17 years and 11 months seen at the Emergency Fever Unit of a children's hospital between 6-11-2021 and 10-3-2021 were recruited. The Panbio COVID-19 Ag® test (Abbott Diagnostic) was compared to the reference method RT-qPCR (as per the protocol suggested by the United States Centers for Disease Control and Prevention).A total of 6491 patients were included. The prevalence of COVID-19 was 2.8%. Symptoms were observed in 92.1%. Sensitivity, specificity, and the kappa index of agreement for the RAgT were 71.0%, 99.9%, and 0.813, respectively. The kappa index and the RAgT sensitivity were significantly higher in the group aged 13-17 years (0.89 and 82.4%, respectively) compared to the groups aged 0-5 and 6-12 years. This may be due to the lower viral load observed in patients younger than 12 years.Although RAgTs shorten the time to result and improve the isolation strategy for COVID-19 patients, their sensitivity in children younger than 12 years or asymptomatic children is not within the recommended ranges, especially during periods of low disease prevalence.Introducción. Los inmunoensayos de detección rápida de antígenos (TRA) del SARS-CoV-2, son considerados adecuados para el diagnóstico en el punto de atención. El objetivo fue conocer la concordancia entre la reacción en cadena de la polimerasa en tiempo real con transcriptasa inversa (RT-qPCR, por su sigla en inglés) y los TRA en población pediátrica. Población y métodos. Se reclutaron todos los pacientes entre 1 mes y 17 años 11 meses de edad atendidos en la Unidad Febril de Urgencia de un hospital pediátrico entre el 11 de junio y el 3 de octubre de 2021. Se utilizó el TRA Panbio COVID-19 Ag® (Abbott Diagnostic) y, como método de referencia, la RT-qPCR (según el protocolo de los Centros para el Control y la Prevención de Enfermedades). Resultados. Se incluyeron 6491 pacientes. La prevalencia de COVID-19 fue del 2,8 %. El 92,1 % de los sujetos presentaron síntomas. La sensibilidad, la especificidad y el índice kappa de concordancia para el TRA fueron del 71,0 %, 99,9 % y 0,813, respectivamente. El índice kappa y la sensibilidad del TRA fueron significativamente mayores en el grupo de 13 a 17 años (0,89 y 82,4 %, respectivamente) cuando se los comparó con los grupos de 0 a 5 y de 6 a 12 años. Esto podría deberse a la menor carga viral observada en los pacientes menores de 12 años. Conclusión. Si bien los TRA permiten acortar el tiempo de obtención de los resultados y mejorar la estrategia de aislamiento de pacientes con COVID-19, la sensibilidad en niños menores de 12 años o asintomáticos no se encontraría dentro de los rangos recomendados, sobre todo en períodos de baja prevalencia de la enfermedad.
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- 2022
28. RSV reemergence in Argentina since the SARS-CoV-2 pandemic
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Acuña Dolores, Goya Stephanie, Nabaes Jodar Mercedes S, Grandis Érica, Alicia S Mistchenko, and Viegas Mariana
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Infectious Diseases ,Genotype ,SARS-CoV-2 ,Virology ,Respiratory Syncytial Virus, Human ,Argentina ,COVID-19 ,Humans ,Infant ,Respiratory Syncytial Virus Infections ,Child ,Pandemics ,Phylogeny - Abstract
The community mitigation measures taken because of the COVID-19 pandemic had side effects on the circulation of the most frequent respiratory viruses during 2020. In the case of respiratory syncytial virus (RSV), an important paediatric pathogen, a decrease in the number of cases and delayed outbreaks was previously described.The genetic characteristics of the RSV circulating strains in paediatric patients in Buenos Aires, Argentina before and during the COVID-19 pandemic were studied. RSV (+) samples taken from hospitalised patients with respiratory tract infections (2018- 2021) were analysed through G gene sequencing and evolutionary analyses.No RSV hospitalised paediatric patients were registered in Buenos Aires during 2020; however, RSV reemerged in 2021 with a lower number of cases and a delayed outbreak, peaking in July-August. A total of 147 G gene sequences were analysed. RSV-B (N = 85) predominated during 2018 and 2021 whereas in 2019 RSV-A were more prevalent (N = 62). All RSV-A sequences were ON1-like strains, and all RSV-B were BA-like. Phylogenetic analyses showed that the same genetic lineages circulated before and after 2020, but RSVs from 2021 corresponded to new viral introductions rather than cryptic circulation of the previous genetic clusters in Buenos Aires during 2020.Following the reopening of borders, the reemergence of RSV in Argentina brought new viral introductions from other countries. Therefore, it is important to continue a deep global molecular surveillance to characterise RSV strains in post-pandemic circulation with an impact in future vaccine implementation.
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- 2022
29. Respiratory syncytial virus and influenza surveillance in schoolchildren seen at a children's hospital over 2 months of the second semester of 2021
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Ana S, Orqueda, María F, Lucion, María de V, Juárez, Raquel, Barquez, Patricia, Stach, Ana, Nievas, Luisina F, Losi, Ramiro F, Suárez, Lucía, Romero Bollón, María N, Pejito, Alicia S, Mistchenko, and Ángela, Gentile
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Cross-Sectional Studies ,Adolescent ,SARS-CoV-2 ,Child, Preschool ,Respiratory Syncytial Virus, Human ,Influenza, Human ,COVID-19 ,Humans ,Respiratory Syncytial Virus Infections ,Child ,Hospitals, Pediatric ,Pandemics - Abstract
Reporting of respiratory infections reduced during the COVID-19 pandemic. The objective was to estimate the prevalence of respiratory syncytial virus(RSV) and influenza in schoolchildren seen at a children's hospital during the return to school.Cross-sectional study of patients aged 3-18 years suspected of COVID-19 with a negative test for SARS-CoV-2 between August and October 2021. Participants were stratified by level of education. PCR was used to detect RSV and influenza.A total of 619 children were included: 234 in pre-school, 224 in primary and 161 in secondary school; 25.5% (158) tested positive for RSV (36.3% in the pre-school level versus 21% in primary and 16% in secondary school). Infection among adolescents was associated with school contact with symptomatic cases (OR 2.5; 95%CI 1-6.80; p = 0.04). No case of influenza was detected.RSV was isolated in one fourth of the study population, with a higher frequency in pre-school; among adolescents, it was associated with school contact with symptomatic cases. No case of influenza was detected.Introducción. Durante la pandemia de COVID-19, disminuyeron las notificaciones de infecciones respiratorias. El objetivo fue estimar la prevalencia de virus sincicial respiratorio (VSR) e influenza en niños escolarizados asistidos en un hospital pediátrico durante el retorno a la presencialidad. Métodos. Estudio transversal de casos sospechosos de COVID-19, de 3-18 años, con prueba negativa para SARS-CoV-2, entre agosto y octubre de 2021. Se estratificó por nivel educativo. Se utilizó PCR para detectar VSR e influenza. Resultados. Se incluyeron 619 niños: 234 del nivel inicial, 224 del primario y 161 del secundario; 25,5 % (158) fueron positivos para VSR (36,3 % del nivel inicial versus 21 % del primario y 16 % del secundario); en adolescentes se asoció la infección al contacto escolar con caso sintomático (OR 2,5; IC95%: 1-6,80; p = 0,04). No se aisló virus influenza. Conclusión. VSR se aisló en un cuarto de la población estudiada, con mayor frecuencia en el nivel inicial; en adolescentes, se asoció con contacto escolar sintomático. No se detectaron casos de influenza.
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- 2021
30. Wild-type Measles Virus in Brain Tissue of Children with Subacute Sclerosing Panencephalitis, Argentina
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Paola Roxana Barrero, Jorge Grippo, Mariana Viegas, and Alicia Susana Mistchenko
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Argentina ,Medicine ,Infectious and parasitic diseases ,RC109-216 - Abstract
We studied eight children who had measles at 6 to 10 months of age during the 1998 Argentine measles outbreak and in whom subacute sclerosing panencephalitis developed 4 years later. We report the genetic characterization of brain tissue–associated measles virus samples from three patients. Phylogenetic relationships clustered these viruses with the wild-type D6 genotype isolated during the 1998 outbreak. The children received measles vaccine; however, vaccinal strains were not found.
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- 2003
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31. Toward unified molecular surveillance of RSV: A proposal for genotype definition
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Alicia Mistchenko, Inne Nauwelaers, Alfonsina Trento, Peter J. M. Openshaw, Mariana Viegas, Stephanie Goya, Monica Galiano, Maria Zambon, National Institute for Health Research, Asthma UK, Imperial College Healthcare NHS Trust- BRC Funding, GlaxoSmithKline Services Unlimited, and Medical Research Council (MRC)
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SELECTION ,human orthopneumovirus ,lineages ,Epidemiology ,RESPIRATORY SYNCYTIAL VIRUS ,030312 virology ,Genome ,Genotype ,Phylogeny ,0303 health sciences ,BUENOS-AIRES ,Phylogenetic tree ,global molecular surveillance ,ALIGNMENT ,Infectious Diseases ,CIRCULATION PATTERNS ,GenBank ,GENETIC DIVERSITY ,Original Article ,average genetic distance ,Life Sciences & Biomedicine ,Pulmonary and Respiratory Medicine ,Computational biology ,Genome, Viral ,Respiratory Syncytial Virus Infections ,Biology ,1117 Public Health and Health Services ,Evolution, Molecular ,03 medical and health sciences ,Viral Proteins ,genotypes ,Virology ,G-PROTEIN ,subgenotypes ,Humans ,SUBGROUP ,Genotyping ,Gene ,Sequence clustering ,Science & Technology ,phylogenetic analysis ,Public Health, Environmental and Occupational Health ,1103 Clinical Sciences ,Original Articles ,EVOLUTION ,Hypervariable region ,GROUP-A ,Respiratory Syncytial Virus, Human ,human respiratory syncytial virus - Abstract
BACKGROUND: Human respiratory syncytial virus (RSV) is classified into antigenic subgroups A and B. Thirteen genotypes have been defined for RSV-A and 20 for RSV-B, without any consensus on genotype definition. METHODS: We evaluated clustering of RSV sequences published in GenBank until February 2018 to define genotypes by using maximum likelihood and Bayesian phylogenetic analyses and average p-distances. RESULTS: We compared the patterns of sequence clustering of complete genomes; the three surface glycoproteins genes (SH, G, and F, single and concatenated); the ectodomain and the 2nd hypervariable region of G gene. Although complete genome analysis achieved the best resolution, the F, G, and G-ectodomain phylogenies showed similar topologies with statistical support comparable to complete genome. Based on the widespread geographic representation and large number of available G-ectodomain sequences, this region was chosen as the minimum region suitable for RSV genotyping. A genotype was defined as a monophyletic cluster of sequences with high statistical support (≥80% bootstrap and ≥0.8 posterior probability), with an intragenotype p-distance ≤0.03 for both subgroups and an intergenotype p-distance ≥0.09 for RSV-A and ≥0.05 for RSV-B. In this work, the number of genotypes was reduced from 13 to three for RSV-A (GA1-GA3) and from 20 to seven for RSV-B (GB1-GB7). Within these, two additional levels of classification were defined: subgenotypes and lineages. Signature amino acid substitutions to complement this classification were also identified. CONCLUSIONS: We propose an objective protocol for RSV genotyping suitable for adoption as an international standard to support the global expansion of RSV molecular surveillance. ispartof: INFLUENZA AND OTHER RESPIRATORY VIRUSES vol:14 issue:3 pages:274-285 ispartof: location:England status: published
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- 2020
32. Secondary dengue virus infections during the 2009 outbreak in Buenos Aires
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Tittarelli, E., Barrero, P. R., Mistchenko, A. S., and Valinotto, L. E.
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- 2016
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33. Burden of Respiratory Syncytial Virus Disease and Mortality Risk Factors in Argentina: 18 Years of Active Surveillance in a Children’s Hospital
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Angela Gentile, Maria Del Valle Juarez, Maria Soledad Areso, Mariana Viegas, Maria Florencia Lucion, Julia Bakir, and Alicia Mistchenko
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Male ,Pediatrics ,CASE FATALITY RATE ,Cross-sectional study ,RESPIRATORY SYNCYTIAL VIRUS ,purl.org/becyt/ford/1 [https] ,0302 clinical medicine ,Cost of Illness ,Risk Factors ,Epidemiology ,Case fatality rate ,Odds Ratio ,EPIDEMIOLOGY ,Prospective Studies ,030212 general & internal medicine ,Prospective cohort study ,Respiratory Tract Infections ,Age Factors ,Hospitalization ,Infectious Diseases ,Acute Disease ,Epidemiological Monitoring ,Female ,CIENCIAS NATURALES Y EXACTAS ,Microbiology (medical) ,medicine.medical_specialty ,Argentina ,MEDLINE ,Respiratory Syncytial Virus Infections ,Ciencias Biológicas ,03 medical and health sciences ,PEDIATRICS ,030225 pediatrics ,medicine ,Humans ,Mortality ,BRONCHIOLITIS ,purl.org/becyt/ford/1.6 [https] ,business.industry ,Infant ,Odds ratio ,medicine.disease ,Cross-Sectional Studies ,Logistic Models ,Bronchiolitis ,Respiratory Syncytial Virus, Human ,Pediatrics, Perinatology and Child Health ,business ,Virología - Abstract
Background: Respiratory syncytial virus is the leading cause of acute lower respiratory infection in children. We aimed to describe the clinical-epidemiologic pattern and risk factors for mortality associated with RSV infection. Methods: This is a prospective, cross-sectional study of acute lower respiratory infection in children admitted to the Children’s Hospital during 2000 to 2017. Viral diagnosis was made by fluorescent antibody techniques or real-time-polymerase chain reaction. We compared clinical-epidemiologic characteristics of RSV infection in nonfatal versus fatal cases. Multiple logistic regression was used to identify independent predictors of mortality. Results: Of 15,451 patients with acute lower respiratory infection, 13,033 were tested for respiratory viruses and 5831 (45%) were positive: RSV 81.3% (4738), influenza 7.6% (440), parainfluenza 6.9% (402) and adenovirus 4.3% (251). RSV had a seasonal epidemic pattern coinciding with months of lowest average temperature. RSV cases show a case fatality rate of 1.7% (82/4687). Fatal cases had a higher proportion of prematurity (P < 0.01), perinatal respiratory history (P < 0.01), malnourishment (P < 0.01), congenital heart disease (P < 0.01), chronic neurologic disease (P < 0.01) and pneumonia at clinical presentation (P = 0.014). No significant difference between genders was observed. Most deaths occurred among children who had complications: respiratory distress (80.5%), nosocomial infections (45.7%), sepsis (31.7%) and atelectasis (13.4%). Independent predictors of RSV mortality were moderate-to-severe malnourishment, odds ratio (OR): 3.69 [95% confidence interval (CI): 1.98–6.87; P < 0.0001]; chronic neurologic disease, OR: 4.14 (95% CI: 2.12–8.08; P < 0.0001); congenital heart disease, OR: 4.18 (95% CI: 2.39–7.32; P< 0.0001); and the age less than 6 months, OR: 1.99 (95% CI: 1.24–3.18; P = 0.004). Conclusions: RSV showed an epidemic pattern affecting mostly young children. Malnourishment, chronic neurologic disease, congenital heart disease and the age less than 6 months were the independent risk factors for RSV mortality. Fil: Gentile, Angela. Gobierno de la Ciudad de Buenos Aires. Hospital General de Niños "Ricardo Gutiérrez"; Argentina Fil: Lucion, Maria Florencia. Gobierno de la Ciudad de Buenos Aires. Hospital General de Niños "Ricardo Gutiérrez"; Argentina Fil: Juarez, Maria del Valle. Gobierno de la Ciudad de Buenos Aires. Hospital General de Niños "Ricardo Gutiérrez"; Argentina Fil: Areso, María Soledad. Gobierno de la Ciudad de Buenos Aires. Hospital General de Niños "Ricardo Gutiérrez"; Argentina Fil: Bakir, Julia. Gobierno de la Ciudad de Buenos Aires. Hospital General de Niños "Ricardo Gutiérrez"; Argentina Fil: Viegas, Mariana. Gobierno de la Ciudad de Buenos Aires. Hospital General de Niños "Ricardo Gutiérrez". Laboratorio de Virología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Mistchenko, Alicia Susana. Gobierno de la Ciudad de Buenos Aires. Hospital General de Niños "Ricardo Gutiérrez". Laboratorio de Virología; Argentina
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- 2019
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34. Encefalomielitis aguda diseminada por Mycoplasma pneumoniae en un niño previamente sano
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Cristian García Roig, Vilma Savy, Alicia Mistchenko, María Cecilia Freire, María E. Cadario, Mónica Garea, Alejandro Ellis, Juan Antonio Sciarrotta, and Antonio Cairnie
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Microbiology (medical) ,Pathology ,medicine.medical_specialty ,Mycoplasma pneumoniae ,Encefalomielitis aguda diseminada ,Immunofluorescence ,medicine.disease_cause ,Microbiology ,Biopsia cerebral ,law.invention ,03 medical and health sciences ,Cerebrospinal fluid ,law ,Clarithromycin ,Acute disseminated encephalomyelitis ,medicine ,Polymerase chain reaction ,0303 health sciences ,medicine.diagnostic_test ,biology ,030306 microbiology ,business.industry ,Brain biopsy ,General Medicine ,medicine.disease ,biology.protein ,Antibody ,business ,medicine.drug - Abstract
Se presenta el caso de un niño de 5 años sin antecedentes de enfermedad, que se internó en terapia intensiva por convulsiones tónico-clónicas focalizadas en la cara y en el hemicuerpo derecho, con documentación de temperatura axilar de 37,4°C. Se descartó la presencia de gérmenes comunes y la etiología viral a través de estudios de muestras de líquido cefalorraquídeo (LCR). Se sospechó la presencia de Mycoplasma pneumoniae por comprobarse inmunofluorescencia positiva en suero para anticuerpos de clase IgM. El diagnóstico se confirmó mediante la detección del ADN de dicho patógeno sobre la biopsia cerebral efectuada por el método de la reacción en cadena de la polimerasa (PCR) y una histología compatible con encefalomielitis aguda diseminada. El paciente recibió tratamiento con claritromicina y su evolución fue favorable. Al menos dentro de nuestros conocimientos, este es el primer caso en el que se detectó ADN de M. pneumoniae en una biopsia cerebral por el método de PCR. We present here the case of a previously healthy 5 year-old boy hospitalized in an intensive care unit due to tonic-clonic seizures focused on the face and right side of the body, and axillary temperature of 37.4 °C. Common bacterial and viral etiology was ruled out through studies of cerebrospinal fluid (CSF) samples. Mycoplasma pneumoniae was suspected by a positive immunofluorescence serum test for IgM class antibodies. Finally, with a brain biopsy, M. pneumoniae was confirmed by polymerase chain reaction (PCR) and acute disseminated encephalomyelitis by pathological anatomy. The patient was treated with clarithromycin and had an uneventful evolution. At least to our knowledge, this is the first case in which M. pneumoniae DNA was detected by PCR in a brain biopsy.
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- 2019
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35. Surveillance of SARS-CoV-2 variants in Argentina: detection of Alpha, Gamma, Lambda, Epsilon and Zeta in locally transmitted and imported cases
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Ignacio Bourlot, Clara Theaux, Mariana Viegas, Carolina Cristina, Maria Colmeiro, Ailen Fernandez, Natalia Labarta, Sofia Di Bella, Manuel Arca, Laura Noelia Mojsiejczuk, Andrea Falaschi, Maria E Jofre, Stephanie Goya, María Florencia Eberhardt, Erica Luczak, Alejandro Castello, Marilina Rahhal, Franco Daniel Fernandez, Ariel Suarez, Dolores Acuna, Martin Zubieta, Andrés Ignacio Cordero, Jorgelina Suarez, Guido Alberto König, Monica Natale, Cecilia Camussone, Alejandra Musto, Andrea F. Puebla, Alicia Mistchenko, Silvina Lusso, Marcia Pozzati, Claudia Rechimont, Jonathan Zaiat, Andrea Gatelli, Belen Monaco, Rocio Larreche, Paula Sujanski, Gabriela Barbas, Regina Ercole, Sofia Alexay, Guillermo Thomas, Carla Medina, Marianne Munoz, Marcelo Mandile, Maria B Zaffanella, Estefania Tittarelli, Matias Irazoqui, Maria Elina Acevedo, Jose Jaramillo, Luciana Montoto, Ariel Fernando Amadio, Mercedes Soledad Nabaes Jodar, Melina Mazzeo, Yesica Espasandin, Viviana Leiva, Maria Laura Alvarez, Facundo Fernandez Moll, Maria A Lacaze, Sebastian Zunino, Osvaldo Cesar Uez, Leticia Siri, Carlos Espul, Darío Fernández Do Porto, Cecilia Ziehm, Cintia Streitenberger, Julieta Spina, Laura Valinotto, Sandra Goni, Humberto Julio Debat, Viviana Mugna, Marco Cacciahue, Gonzalo Castro, Agustina Bonnet, Maria Ines Gismondi, Cristina López, Sofia Bengoa, Carolina Ceriani, Viviana Ré, Luis Pianciola, María José Dus Santos, Paula C. Aulicino, Federico Remes Lenicov, Gustavo Levin, Andres Angelletti, Patricia Angeleri, Vanesa Seery, Carlos Cimino, Nathalie Marquez, Juan M Talia, Marina Ticeira, Rosana Toro, Gabriela Rompato, Ana Bertone, Belén Pisano, Guillermo Ojeda, Carla Massone, Ezequiel Sosa, Carolina Pintos, Carolina Torres, and Julian Cipelli
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Sanger sequencing ,Limited access ,symbols.namesake ,Geography ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Capital city ,symbols ,Coding region ,Lambda ,Cartography ,Rapid response - Abstract
Molecular surveillance of SARS-CoV-2 variants was performed on a total of 2,406 samples from the capital city and nine provinces of Argentina, during 30 epidemiological weeks (EW) that covered the end of the first wave and the beginning of the ongoing second wave of the COVID-19 pandemic in the country (EW 44/2020 to EW 20/2021). The surveillance strategy was mainly based on Sanger sequencing of a Spike coding region that allows the simultaneous identification of signature mutations associated with worldwide circulating variants. In addition, whole SARS-CoV-2 genome sequences were obtained from 456 samples. The main variants found were Gamma, Lambda and Alpha, and to a lesser extent, Zeta and Epsilon. Whereas Gamma dominated in different regions of the country, both Gamma and Lambda prevailed in the most populated area, the metropolitan region of Buenos Aires (MABA), although showing a heterogeneous distribution along this region. This cost-effective surveillance protocol allowed for a rapid response in a limited access to resources scenario, added information on the expansion of the Lambda variant in South America and contributed to the implementation of public health measures to control the disease spread in Argentina.
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- 2021
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36. Dengue beyond the tropics: a time-series study comprising 2015-2016 versus 2019-2020 at a children's hospital in the City of Buenos Aires
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Griselda, Berberian, Guadalupe, Pérez, Andrea, Mangano, Daniela, Borgnia, Ana, Buchovsky, Marina, Costa, Cintia, Fabbri, Victoria, Luppo, Alicia S, Mistchenko, Verónica, Deschutter, Claudia, Botana, Soledad, Martiren, Martín, Brizuela, Ana P, Arias, and María T, Rosanova
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Dengue ,Adolescent ,Humans ,Severe Dengue ,Exanthema ,Child ,Hospitals, Pediatric ,Disease Outbreaks - Abstract
Dengue is a public health problem worldwide. It was originally confined to tropical and subtropical areas, but it is now present in other regions, such as Argentina. Epidemic outbreaks have been observed in the City of Buenos Aires since 2008, with few reports in children.To analyze and compare the clinical, epidemiological, laboratory, and evolutionary characteristics of the latest 2 dengue outbreaks outside the endemic area.Time-series study. Patients under 18 years of age with probable or confirmed dengue and evaluated in a children's hospital of the City of Buenos Aires during the periods 2015-2016 and 2019-2020 were included.A total of 239 patients were included; 29 (12%) had a history of travel. Their median age was 132 months (interquartile range: 102- 156). All had a fever. Other symptoms included headache in 170 (71%), myalgia in 129 (54%), and rash in 122 (51%). Forty patients (17%) had comorbidities. Warning signs were observed in 79 patients (33%); 14 (6%) developed severe dengue; 115 (45%) were hospitalized; none died. DENV-1 was the most common serotype. A history of travel and hospitalization prevailed in the first period; severe dengue and prior infection, in the second period.No patient died due to dengue in either study period. Statistically significant differences were observed in the frequency of hospitalization; a history of travel was more common in the 2015-2016 period and severe dengue, in the 2019-2020 period.Introducción. El dengue es un problema de salud pública a nivel mundial. Confinado en sus orígenes a las zonas tropicales y subtropicales, en la actualidad se presenta en otras regiones como Argentina. Desde el año 2008 se presenta con brotes epidémicos en la Ciudad Autónoma de Buenos Aires, con escasos reportes en niños.Analizar y comparar las características clínicas, epidemiológicas, de laboratorio y evolutivas de los dos últimos brotes de dengue fuera del área endémica. Población y métodos. Estudio de series temporales. Se incluyeron pacientes menores de 18 años con dengue probable o confirmado, evaluados en un hospital pediátrico de la Ciudad de Buenos Aires durante los períodos 2015-2016 y 2019-2020.Se incluyeron 239 pacientes, 29 (12 %) con antecedente de viaje. La mediana de edad fue de 132 meses (rango intercuartílico: 102-156). Todos tuvieron fiebre. Otros síntomas fueron: cefalea en 170 (71 %), mialgias en 129 (54 %) y exantema en 122 (51 %). Cuarenta pacientes (17 %) tenían comorbilidades. Presentaron signos de alarma 79 pacientes (33 %) y 14 (6 %) tenían dengue grave. Requirieron internación 115 pacientes (45 %) y ninguno falleció. El serotipo DENV-1 fue el más frecuente. El antecedente de viaje y la necesidad de internación predominaron en el primer período; el dengue grave y la infección previa, en el segundo.Ningún paciente falleció de dengue en los períodos estudiados. Se observaron diferencias estadísticamente significativas en la frecuencia de internación; el antecedente de viaje fue más frecuente en el período 2015-2016 y el dengue grave, en el 2019-2020.
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- 2021
37. Epidemiology of Enteric Adenovirus Infection in Prospectively Monitored Argentine Families
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Mistchenko, A. S., Huberman, K. H., Gomez, J. A., and Grinstein, S.
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- 1992
38. Impact of COVID-19 on the circulation of respiratory viruses in a children's hospital: an expected absence
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M Florencia, Lucion, M, Del Valle Juárez, M Natalia, Pejito, Ana S, Orqueda, Lucía, Romero Bollón, Alicia S, Mistchenko, and Ángela, Gentile
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Adolescent ,Viruses ,COVID-19 ,Humans ,Child ,Hospitals, Pediatric ,Pandemics ,Retrospective Studies - Abstract
Respiratory viruses are the main cause of acute lower respiratory tract infection (ALRTI) in the pediatric population. In March 2020, the World Health Organization declared that the new coronavirus disease 2019 (COVID-19) had reached the pandemic status. Our objective was to describe the impact of COVID-19 pandemic on hospitalizations due to ALRTI at Hospital de Niños Ricardo Gutiérrez (HNRG) and virus circulation.Observational, retrospective, and descriptive study of patients hospitalized due to ALRTI comparing 2019 and 2020.In 2020, the rate of hospitalization due to ALRTI decreased by 73%. In 2019, 517 patients with ALRTI were hospitalized; the following viruses were identified in 174: respiratory syncytial virus (RSV) (71.2%), adenovirus (AV) (10.3%), parainfluenza virus (PIV) (9.7%), and influenza virus (FLU) (8.6%). In 2020, 94 patients with ALRTI were hospitalized. Until epidemiological week (EW) 13, cases of ALRTI due to PIV and AV were recorded; in EW 29, there was 1 case of bronchiolitis due to AV and rhinovirus (RV), followed by isolated cases of RV; no ALRTI due to RSV or FLU was recorded. In total, 9 cases of ALRTI due to COVID-19 were recorded: 2 moderate bronchiolitis and 7 focal pneumonia; 1 adolescent with comorbidities died due to COVID-19 pneumonia. In 2020, patients were older and had more comorbidities and prior hospitalizations compared to 2019. Focal pneumonia prevailed.In 2020, the rate of hospitalization due to ALRTI decreased significantly compared to 2019, with the absence of seasonal respiratory virus circulation in the pediatric population.Introducción. Los virus respiratorios son la principal causa de infección respiratoria aguda baja (IRAB) en la población pediátrica. En marzo de 2020, la Organización Mundial de la Salud declaró el estado de pandemia de la enfermedad por el nuevo coronavirus 2019 (COVID-19) con un impacto global elevado. El objetivo de este estudio fue describir el impacto de la pandemia de COVID-19 en las internaciones por IRAB en el Hospital de Niños Ricardo Gutiérrez (HNRG) y la circulación viral. Métodos. Estudio observacional, retrospectivo y descriptivo de pacientes internados por IRAB, comparando los años 2019 y 2020. Resultados. En 2020, la tasa de hospitalización por IRAB se redujo un 73 % en el HNRG (575,1/10 000 en 2019 y 155,3/10 000 en 2020). En 2019 se internaron 517 pacientes con IRAB; en 174 se identificaron los virus: sincicial respiratorio (71,2%), adenovirus (AV) (10,3%), parainfluenza (PIF) (9,7 %) e influenza (FLU) (8,6 %). En 2020, se hospitalizaron 94 pacientes con IRAB. Hasta la semana epidemiológica (SE) 13 se registraron casos de IRAB por PIF y AV; en la SE 29 un caso de bronquiolitis por AV y rinovirus (RV), seguido de casos aislados de RV; no hubo IRAB por VSR ni por FLU. Se registraron 9 casos de IRAB por COVID-19: 2 bronquiolitis moderadas y 7 neumonías focales; con un adolescente fallecido por neumonía por COVID-19 con comorbilidades. En 2020, los casos presentaron mayor edad, más comorbilidades e internaciones previas en comparación con el 2019. La neumonía focal fue la presentación clínica predominante. Conclusión. En 2020, la tasa de hospitalización por IRAB se redujo significativamente en comparación con el año anterior, con ausencia de circulación de virus respiratorios estacionales en la población asistida en nuestro centro.
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- 2021
39. Genetic analysis of Dengue virus type 3 isolated in Buenos Aires, Argentina
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Barrero, Paola Roxana and Mistchenko, Alicia Susana
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- 2008
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40. Dengue virus 1 in Buenos Aires from 1999 to 2010: towards local spread.
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Estefanía Tittarelli, Alicia S Mistchenko, and Paola R Barrero
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Medicine ,Science - Abstract
Dengue virus (DENV) is a public health problem representing the most important arthropod-borne viral disease in humans. In Argentina, Northern provinces have reported autochthonous cases since 1997, though these outbreaks have originated in bordering countries, where co-circulation of more than one serotype has been reported. In the last decade, imported dengue cases have been reported in Buenos Aires, the urban area of Argentina with the highest population density. In 2009, a dengue outbreak affected Buenos Aires and, for the first time, local transmission was detected. All cases of this outbreak were caused by DENV-1. In this report, we present the full-length sequences of 27 DENV-1 isolates, corresponding to imported cases of 1999-2000, as well as local and imported cases of the 2009 and 2010 outbreaks. We analyzed their phylogenetic and phylodynamic relationships and their global and local spread. Additionally, we characterized their genomic and phenotypic features. All cases belonged to DENV-1 genotype V. The most recent ancestor for this genotype was dated ∼1934, whereas that for the 2009 outbreak was dated ∼2007. The mean rates of nucleotide substitution were 4.98E-4 and 8.53E-4 subs./site/yr, respectively. We inferred an introduction from Paraguay in 1999-2000 and mainly from Venezuela during 2009-2010. Overall, the number of synonymous substitutions per synonymous site significantly exceeded the number of non-synonymous substitutions per site and 12 positively selected sites were detected. These analyses could contribute to a better understanding regarding spread and evolution of this pathogen in the Southern Cone of South America.
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- 2014
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41. New data on trophic relations between eulophid parasitic wasps (Hymenoptera, Eulophidae) and lepidopterans in Ul’yanovsk Province
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Yefremova, Z. A. and Mistchenko, A. V.
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- 2009
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42. SARS-CoV-2 Antibody Response Following SPUTNIK V Vaccination in Healthcare Workers From a Hospital in Argentina: Preliminary Results
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Anabella Pacchiotti, Natacha Weinberger, Vanesa Castellano, Alicia Mistchenko, Patricia Lamy, Sofia María Diana Menendez, Georgina Carciofi, Mariela del Pino, and Angela Gentile
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History ,medicine.medical_specialty ,Polymers and Plastics ,biology ,business.industry ,Industrial and Manufacturing Engineering ,Vaccination ,Immunization ,Informed consent ,Internal medicine ,Health care ,medicine ,Chi-square test ,biology.protein ,Seroprevalence ,Business and International Management ,Antibody ,business ,Cohort study - Abstract
Background: In December 2020, Sputnik V was the first vaccine incorporated to the National Strategic COVID-19 Immunization Plan in Argentina. An interim phase three analysis carried out in the Russian Federation had shown 98% of Sputnik V vaccinees developed specific antibodies to SARS-CoV-2. To date, data on immunogenicity in Argentina are scarce. The objective of this study was to assess the immune response following vaccination with two doses of Sputnik V in health-care workers (HCW) at a Children’s Hospital. Methods: A prospective, cohort study in HCWs immunized with two doses of Sputnik V between February and May 2021. The following variables were assessed: age, gender, profession, risk factors for severe COVID-19 or mortality, immunosuppressive therapy and history of COVID-19 infection. Blood samples were drawn on the day of the first dose and 21-40 days after the second. Anti-Spike IgG was measured using an ELISA assay and antibody levels classified into five semi-quantitative categories: non-reactive, < 1/100, ≥1/100-< 1/1000, ≥1/1000
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- 2021
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43. Surveillance of SARS-CoV-2 variants in Argentina: detection of Alpha, Gamma, Lambda, Epsilon and Zeta in locally transmitted and imported cases
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Carolina, Torres, primary, Laura, Mojsiejczuk, additional, Dolores, Acuña, additional, Sofía, Alexay, additional, Ariel, Amadio, additional, Paula, Aulicino, additional, Humberto, Debat, additional, Franco, Fernández, additional, Stephanie, Goya, additional, Guido, König, additional, Mercedes, Nabaes Jodar, additional, Luis, Pianciola, additional, Sofía, Bengoa, additional, Marco, Cacciahue, additional, Cecilia, Camussone, additional, José, Dus Santos María, additional, Florencia, Eberhardt María, additional, Ailen, Fernandez, additional, Inés, Gismondi María, additional, Matías, Irazoqui, additional, Silvina, Lusso, additional, Nathalie, Marquez, additional, Marianne, Muñoz, additional, Mónica, Natale, additional, Belén, Pisano, additional, Andrea, Puebla, additional, Viviana, Re, additional, Ezequiel, Sosa, additional, Jonathan, Zaiat, additional, Sebastián, Zunino, additional, Darío, Do porto, additional, Elina, Acevedo María, additional, Cristina, Alvarez Lopez, additional, Laura, Álvarez María, additional, Patricia, Angeleri, additional, Andrés, Angelletti, additional, Manuel, Arca, additional, Gabriela, Barbas, additional, Ana, Bertone, additional, Agustina, Bonnet, additional, Ignacio, Bourlot, additional, Alejandro, Castello, additional, Gonzalo, Castro, additional, Carolina, Ceriani, additional, Carlos, Cimino, additional, Julián, Cipelli, additional, María, Colmeiro, additional, Andrés, Cordero, additional, Carolina, Cristina, additional, Sofia, Di Bella, additional, Regina, Ercole, additional, Yesica, Espasandin, additional, Carlos, Espul, additional, Andrea, Falaschi, additional, Facundo, Fernandez Moll, additional, Andrea, Gatelli, additional, Sandra, Goñi, additional, Estela, Jofré María, additional, José, Jaramillo, additional, Natalia, Labarta, additional, Agustina, Lacaze María, additional, Rocio, Larreche, additional, Viviana, Leiva, additional, Gustavo, Levin, additional, Erica, Luczak, additional, Marcelo, Mandile, additional, Carla, Massone, additional, Melina, Mazzeo, additional, Carla, Medina, additional, Belén, Monaco, additional, Luciana, Montoto, additional, Viviana, Mugna, additional, Alejandra, Musto, additional, Guillermo, Ojeda, additional, Carolina, Pintos, additional, Marcia, Pozzati, additional, Marilina, Rahhal, additional, Claudia, Rechimont, additional, Federico, Remes Lenicov, additional, Gabriela, Rompato, additional, Vanesa, Seery, additional, Leticia, Siri, additional, Julieta, Spina, additional, Cintia, Streitenberger, additional, Ariel, Suárez, additional, Jorgelina, Suárez, additional, Paula, Sujanski, additional, Manuel, Talia Juan, additional, Clara, Theaux, additional, Guillermo, Thomas, additional, Marina, Ticeira, additional, Estefanía, Tittarelli, additional, Rosana, Toro, additional, Osvaldo, Uez, additional, Belén, Zaffanella María, additional, Cecilia, Ziehm, additional, Martin, Zubieta, additional, Alicia, Mistchenko, additional, Laura, Valinotto, additional, and Mariana, Viegas, additional
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- 2021
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44. Analysis of COL7A1 pathogenic variants in a large cohort of dystrophic epidermolysis bullosa patients from Argentina reveals a new genotype–phenotype correlation.
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Natale, Mónica Inés, Manzur, Graciela Beatriz, Lusso, Silvina Beatriz, Cella, Eliana, Giovo, María Elsa, Andrada, Romina, Goitia, Juana, Fernández, María Florencia, Della Giovanna, Patricia Silvia, Guillamondegui, María José, Domínguez, Mariángeles, Gutiérrez, Olga, Izquierdo, Agustín, Hernández Herrera, Heliana, Velázquez Perdomo, Luz Graciela, Mistchenko, Alicia Susana, and Valinotto, Laura Elena
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Dystrophic epidermolysis bullosa (DEB) is a clinically heterogeneous heritable skin disorder, characterized by blistering of the skin and mucous membranes following minor trauma. Dominant (DDEB) and recessive (RDEB) forms are caused by pathogenic variants in COL7A1 gene. Argentina's population has a heterogeneous genetic background, and little is known about the molecular basis of DEB in our country or in native South American populations. In this study, we present the prevalence and geographical distribution of pathogenic variants found in 181 patients from 136 unrelated families (31 DDEB and 105 RDEB). We detected 95 different variants, 59 of them were previously reported in the literature and 36 were novel, nine of which were detected in more than one family. The most prevalent pathogenic variants were identified in exon 73 in DDEB patients and in exon 3 in RDEB patients. We also report a new phenotype–genotype correlation found in 10 unrelated families presenting mild blistering and severe mucosal involvement. Molecular studies in populations with an unexplored genetic background like ours revealed a diversity of pathogenic variants, and we hope that these findings will contribute to the definition of targets for new gene therapies. [ABSTRACT FROM AUTHOR]
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- 2022
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45. Phylogenetic and phylodynamic analyses of human metapneumovirus in Buenos Aires (Argentina) for a three-year period (2009-2011).
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Ana Julia Velez Rueda, Alicia Susana Mistchenko, and Mariana Viegas
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Medicine ,Science - Abstract
Human metapneumovirus, which belongs to the Paramyxoviridae family and has been classified as a member of the Pneumovirus genus, is genetically and clinically similar to other family members such as human respiratory syncytial virus. A total of 1146 nasopharyngeal aspirates from pediatric patients with moderate and severe acute lower respiratory tract infections, hospitalized at the Ricardo Gutierrez Childreńs Hospital (Buenos Aires, Argentina), were tested by real time RT-PCR for human metapneumovirus. Results showed that 168 (14.65%) were positive. Thirty-six of these 168 samples were randomly selected to characterize positive cases molecularly. The phylogenetic analysis of the sequences of the G and F genes showed that genotypes A2 and B2 cocirculated during 2009 and 2010 and that only genotype A2 circulated in 2011 in Argentina. Genotype A2 prevailed during the study period, a fact supported by a higher effective population size (Neτ) and higher diversity as compared to that of genotype B2 (10.9% (SE 1.3%) vs. 1.7% (SE 0.4%), respectively). The phylogeographic analysis of the G protein gene sequences showed that this virus has no geographical restrictions and can travel globally harbored in hosts. The selection pressure analysis of the F protein showed that although this protein has regions with polymorphisms, it has vast structural and functional constraints. In addition, the predicted B-linear epitopes and the sites recognized by previously described monoclonal antibodies were conserved in all Argentine sequences. This points out this protein as a potential candidate to be the target of future humanized antibodies or vaccines.
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- 2013
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46. Respiratory syncytial virus in preterm infants: 19 years of active epidemiological surveillance in a children’s hospital
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Stephanie Goya, Angela Gentile, Anabella Pacchiotti, Maria Del Valle Juarez, Alicia Mistchenko, Maria Soledad Areso, Julia Bakir, Mariana Viegas, María F Lucion, and Vanesa Castellano
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medicine.medical_specialty ,Pediatrics ,Heart disease ,Respiratory Syncytial Virus Infections ,Disease ,Risk Factors ,Intensive care ,Case fatality rate ,Epidemiology ,medicine ,Humans ,Prospective Studies ,Child ,Respiratory tract infections ,business.industry ,Respiratory disease ,Infant, Newborn ,Infant ,Hospitals, Pediatric ,medicine.disease ,Hospitalization ,Cross-Sectional Studies ,Bronchopulmonary dysplasia ,Respiratory Syncytial Virus, Human ,Pediatrics, Perinatology and Child Health ,business ,Infant, Premature - Abstract
Respiratory syncytial virus (RSV) is the leading cause of acute lower respiratory tract infection (ALRTI) in pediatrics. Preterm infants are at a higher risk for complications. We aimed to describe and compare the clinical and epidemiological characteristics associated with ALRTI due to RSV in preterm and term infants and to establish the predictors of fatality among preterm infants.Prospective, cross-sectional study of patients admitted due to ALRTI in the 2000-2018 period. Viral diagnosis was done by indirect immunofluorescence or reverse transcription polymerase chain reaction in nasopharyngeal aspirates. Clinical and epidemiological characteristics were recorded. A multiple logistic regression model established the predictors of fatality among preterm infants.A total of 16 018 ALRTI cases were included; 13 545 (84.6 %) were tested; 6047 (45 %) were positive; RSV was prevalent in 81.1 % (4907), with a seasonal epidemic pattern; 14 % (686) were preterm infants. Comorbidities, perinatal respiratory history, congenital heart disease, malnutrition, chronic respiratory disease, bronchopulmonary dysplasia, prior hospitalization due to ALRTI, and chronic neurological disease (p0.001) were more common among preterm infants; they required more intensive care and a longer length of stay, and had a higher fatality rate (p0.01). Congenital heart disease was an independent predictor of fatality due to RSV among preterm infants (OR: 3.67 [1.25-10.8], p = 0.01).RSV showed an epidemic pattern and affected more preterm infants with certain comorbidities, with a higher morbidity and mortality, compared to term infants. RSV fatality among preterm infants was associated with congenital heart disease.Introducción. El virus sincicial respiratorio (VSR) es el principal agente causal de la infección respiratoria aguda baja (IRAB) en pediatría. Los niños prematuros tienen mayor riesgo de complicaciones asociadas con esta infección. Los objetivos fueron describir y comparar las características clínicas y epidemiológicas asociadas a IRAB por VSR en niños/as nacidos pretérmino y a término, y establecer predictores de letalidad en los prematuros. Métodos. Estudio prospectivo, transversal, de pacientes ingresados por IRAB, en el período 2000-2018. El diagnóstico virológico se realizó mediante inmunofluorescencia indirecta o reacción en cadena de la polimerasa con transcriptasa inversa de aspirados nasofaríngeos. Se registraron las características clínicoepidemiológicas. Se desarrolló un modelo de regresión logística múltiple para establecer los predictores de letalidad en prematuros. Resultados. Se incluyeron 16 018 casos de IRAB; 13 545 (el 84,6 %) fueron estudiados; 6047 (el 45 %) positivos; VSR predominó en el 81,1 % (4907); mostró un patrón epidémico estacional; el 14 % (686) fueron prematuros. Los prematuros mostraron mayor frecuencia de comorbilidades, antecedentes respiratorios perinatales, cardiopatía congénita, desnutrición, enfermedad respiratoria crónica, displasia broncopulmonar, hospitalización previa por IRAB y enfermedad neurológica crónica (p0,001); requirieron más cuidados intensivos, mayor tiempo de internación y mayor tasa de letalidad (p0,01). La cardiopatía congénita fue predictor independiente de letalidad por VSR en prematuros [OR 3,67 (1,25-10,8), p = 0,01]. Conclusión. VSR mostró un patrón epidémico, afectó a prematuros con ciertas comorbilidades con mayor morbimortalidad que los de término. La letalidad por VSR en prematuros se asoció con la cardiopatía congénita.
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- 2020
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47. Community-level SARS-CoV-2 Seroprevalence Survey in urban slum dwellers of Buenos Aires City, Argentina: a participatory research
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Alicia Mistchenko, Fernán Gonzalez Bernaldo de Quirós, Julieta Salto, Lorena Luna, Magdalena Wagner Manslau, Silvana Figar, Ana María Gómez Saldaño, Andrea V. Gamarnik, and Vanina Pagotto
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Geography ,Transmission (medicine) ,Risk of infection ,Multilevel model ,medicine ,Seroprevalence ,Disease ,medicine.symptom ,Asymptomatic ,Slum ,Herd immunity ,Demography - Abstract
BackgroundBy July 1st, the incidence rate of RT-qPCR SARS-CoV-2 infection was 5.9% in Barrio Padre Mugica, one of the largest slums in Buenos Aires City. This study aimed to establish the seroprevalence of SARS-CoV-2 three months after the first case was reported.MethodsBetween June 10th and July 1st, a cross-sectional design was carried out on people over 14 years old, selected from a probabilistic sample of households. A finger prick sample was tested by ELISA to detect IgG-class antibodies against SARS-CoV-2. Multilevel model was applied to understand sector, household and individual conditions associated with seroconvert.ResultsPrevalence based on IgG was 53.4% (95%IC 52.8% to 54.1%). Among the IgG positive cases, 15% reported having compatible symptoms at some point in the past two months. There is evidence of within-household clustering effect (rho=0.52; 95% IC 0.36-0.67); living with a PCR-confirmed case doubled the chance of being SARS-CoV2 IgG positive (OR 2.13; 95% IC 1.17-3.85). The highest risk of infection was found in one of the most deprived areas of the slum, the “Bajo autopista” sector.DiscussionHigh seroprevalence is shown, for each symptomatic RT-qPCR-confirmed diagnosis, 9 people were IgG positive, indicating a high rate of undetected (probable asymptomatic) infections. Given that transmission among family members is a leading driver of the disease’s spread, it is unsurprising that crowded housing situations in slums are directly associated with higher risk of infection and consequently high seroprevalence levels.This study contributes to the understanding of population immunity against SARS-CoV2, its relation to living conditions and viral spread, for future decision making.
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- 2020
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48. Clinical and epidemiological study of acute lower respiratory tract infections caused by adenovirus in hospitalized children. Nineteen years of active epidemiological surveillance
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Alicia Mistchenko, Angela Gentile, Maria Florencia Lucion, Julia Bakir, Maria Soledad Areso, Mariana Viegas, and Maria Del Valle Juarez
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Male ,medicine.medical_specialty ,Adolescent ,Adenoviridae Infections ,Argentina ,030204 cardiovascular system & hematology ,Logistic regression ,Severity of Illness Index ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,Interquartile range ,030225 pediatrics ,Internal medicine ,Epidemiology ,Case fatality rate ,medicine ,Humans ,Public Health Surveillance ,Prospective Studies ,Respiratory system ,Adenovirus infection ,Child ,Respiratory Tract Infections ,Respiratory tract infections ,business.industry ,Infant, Newborn ,Infant ,medicine.disease ,Hospitalization ,Pneumonia ,Cross-Sectional Studies ,Logistic Models ,Child, Preschool ,Pediatrics, Perinatology and Child Health ,Female ,business - Abstract
Acute lower respiratory tract infection (ALRTI) caused by adenovirus is a major cause of morbidity and mortality in children.To describe the clinical and epidemiological pattern and associated factors in hospitalized children.Cross-sectional study in children admitted due to ALRTI to Hospital de Niños "Ricardo Gutiérrez," in the Autonomous City of Buenos Aires, between 2000 and 2018. Viral diagnosis was done by indirect immunofluorescence in nasopharyngeal secretions. The clinical and epidemiological characteristics of adenovirus infection were compared to other respiratory viruses (respiratory syncytial virus, influenza, and parainfluenza). A multiple logistic regression was done to identify independent predictors of infection.Out of 16 018 patients with ALRTI, 13 545 were tested for respiratory viruses; 6047 (45 %) had a positive result. Adenovirus was the least common agent (4.4 % [265] of cases); it tended towards a reduction over the study period (peak in 2003) and circulated throughout the year (peak in July). In total, 63.8 % of patients were males; median age: 11 months (interquartile range: 6-20). The most common clinical presentation was pneumonia (63 %). Prior admissions due to respiratory conditions were seen in 50 %; 15.6 % were readmissions; 58.3 % had comorbidities. Ventilatory support was required by 19.2 % and complications were recorded in 44 %. The fatality rate was 7.7 %. Adenovirus infection was associated with age ≥ 12 months, male sex, clinical presentation of pneumonia, prior admissions due to respiratory conditions, and readmissions.Adenoviruses were less common than other respiratory viruses, although their morbidity and mortality were important.Introducción. La infección respiratoria aguda baja por adenovirus es una importante causa de morbimortalidad en niños. Objetivos: Describir el patrón clínicoepidemiológico y los factores asociados en niños hospitalizados. Métodos. Estudio transversal en niños ingresados por infección respiratoria aguda baja al Hospital de Niños Ricardo Gutiérrez, Buenos Aires, en 2000-2018. El diagnóstico viral se realizó mediante inmunofluorescencia indirecta en secreciones nasofaríngeas. Se compararon características clínico-epidemiológicas de infección por adenovirus con otros virus respiratorios (virus sincicial respiratorio, influenza y parainfluenza). Se utilizó regresión logística múltiple para identificar predictores independientes de infección. Resultados. De 16018 pacientes con infección respiratoria aguda baja, 13545 fueron testeados para virus respiratorios y 6047 (el 45 %) fueron positivos. Adenovirus fue el agente menos frecuente [el 4,4 % (265) de los casos]; presentó una tendencia en descenso durante todo el período estudiado (pico en 2003) y circuló durante todo el año (pico en julio). El 63,8 % eran varones; mediana de edad: 11 meses (rango intercuartílico: 6-20). La presentación clínica más frecuente fue neumonía (el 63 %). El 50 % tenía internaciones previas por causa respiratoria; el 15,6 % eran reingresos; el 58,3 % tenía comorbilidades. El 19,2 % requirió asistencia ventilatoria; el 44 % registró complicaciones. La letalidad fue del 7,7 %. La infección por adenovirus se asoció a edad ≥ 12 meses, sexo masculino, presentación clínica de neumonía, internaciones previas por causas respiratorias y reinternaciones. Conclusiones. Los adenovirus fueron detectados con menor frecuencia que los otros virus respiratorios, aunque presentaron un importante perfil de morbimortalidad.
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- 2020
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49. Cover
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Stephanie Goya, Mónica Galiano, Inne Nauwelaers, Alfonsina Trento, Peter J. Openshaw, Alicia S. Mistchenko, Maria Zambon, and Mariana Viegas
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Pulmonary and Respiratory Medicine ,Infectious Diseases ,Epidemiology ,Public Health, Environmental and Occupational Health - Published
- 2020
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50. Detection of interleukin 10 in cerebrospinal fluid of patients with subacute sclerosing panencephalitis
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Mistchenko, A. S., Fornari, M. C., Viegas, M., Barrero, P. R., and Diez, R. A.
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- 2005
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