195 results on '"Mikhail MA"'
Search Results
2. The influence of magnesium dichloride as support on molecular weights of the polyethylenes produced by Ziegler-Natta catalyst
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Tatiana Mikenas, A. Sholma, Vladimir A. Zakharov, and Mikhail Matsko
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ziegler-natta catalysts ,magnesium dichloride ,titanium-magnesium catalysts composition and structure ,ethylene polymerization ,molecular weight characteristics of polyethylene ,Polymers and polymer manufacture ,TP1080-1185 - Abstract
The paper presents data on the effect exerted by magnesium dichloride in Ziegler-Natta catalysts on the activity and molecular weight of polyethylene (PE) produced by ethylene polymerization in the absence or presence of hydrogen. It was found that ethylene polymerization in the absence of hydrogen over titanium-magnesium catalysts (TMCs) with different ratio of titanium chloride and magnesium dichloride (Ti/Mg = 0.5 and 0.07), oxidation state of titanium (TiCl3 or TiCl4) and structural characteristics of the catalysts leads to the formation of PE with a close molecular weight. At the same time, PE obtained over a δ-TiCl3 catalyst has a much (threefold) higher molecular weight. The introduction of hydrogen during polymerization for decreasing the molecular weight of PE is accompanied by a sharp drop in activity of the δ-TiCl3 catalyst, in distinction to the highly active supported TMC containing 3 wt. % Ti. Data about the effect of hydrogen content during polymerization on the molecular weight of PE were used to calculate the ratio of rate constants for polymer chain transfer with hydrogen (KtrH) and polymer chain propagation reaction (Кр). This value was close for TMCs of different composition containing magnesium dichloride. In the case of δ-TiCl3, the KtrH/Кр value was approximately two times lower compared to TMCs.
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- 2024
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3. Exciton migration in two-dimensional materials
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Mikhail Malakhov, Giovanni Cistaro, Fernando Martín, and Antonio Picón
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Astrophysics ,QB460-466 ,Physics ,QC1-999 - Abstract
Abstract Excitons play an essential role in the optical response of two-dimensional materials. These are bound states showing up in the band gaps of many-body systems and are conceived as quasiparticles formed by an electron and a hole. By performing real-time simulations in hBN, we show that an ultrashort (few-fs) UV pulse can produce a coherent superposition of excitonic states that induces an oscillatory motion of electrons and holes between different valleys in reciprocal space, leading to a sizeable exciton migration in real space. We also show that an ultrafast spectroscopy scheme based on the absorption of an attosecond pulse in combination with the UV pulse can be used to read out the laser-induced coherences, hence to extract the characteristic time for exciton migration. This work opens the door towards ultrafast electronics and valleytronics adding time as a control knob and exploiting electron coherence at the early times of excitation.
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- 2024
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4. Characterization of increased mortality of Drosophila melanogaster exposed to sucrose-fermenting yeast
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Mikhail Martchenko Shilman, Thomas Henderson, and Wai Gee
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Saccharomyces cerevisiae ,Fruit flies ,Sucrose ,Agriculture ,Biology (General) ,QH301-705.5 - Abstract
Adult fruit flies are strongly attracted to odors emitted by the microbial fermentation of sugars in fruits. Such microbes, particularly yeasts, also serve as an essential nutritional source for fruit flies and influence their reproduction and fecundity. Despite being known as natural symbionts, it was previously observed that sucrose-fermenting Saccharomyces cerevisiae can be lethal to Drosophila melanogaster. This study characterizes the conditions that affect the lethality of S. cerevisiae in fruit flies. We showed that the insecticidal activity of yeast was equal in five tested S. cerevisiae strains. Another yeast, Pichia anomala, killed fruit flies, although to a lesser degree than S. cerevisiae. Higher concentrations of yeast resulted in faster killing of fruit flies, although the killing rate was capped at two days of continuous exposure. Both sexes were similarly sensitive to yeast at 30, whereas males were less sensitive to yeast at 25 degrees Celsius. Higher sucrose amounts in food slightly decreased the sensitivity of male but not female flies to yeast. This study characterizes a relatively uncharted side of the intricate interaction between fruit flies and yeast and highlights the possibility for manipulation aimed at mitigating the agricultural impact of these pests.
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- 2024
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5. Extracellular vesicle mimetics as delivery vehicles for oligonucleotide-based therapeutics and plasmid DNA
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Anastasiya Oshchepkova, Ivan Chernikov, Svetlana Miroshnichenko, Olga Patutina, Oleg Markov, Innokenty Savin, Yaroslav Staroseletz, Mariya Meschaninova, Pavel Puchkov, Sergey Zhukov, Maxim Kupryushkin, Mikhail Maslov, Aleksandra Sen’kova, Valentin Vlassov, Elena Chernolovskaya, and Marina Zenkova
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extracellular vesicle mimetics ,cytochalasin B ,multidrug resistance ,melanoma ,siRNA ,antisense oligonucleotide (ASO) ,Biotechnology ,TP248.13-248.65 - Abstract
IntroductionSmall membrane particles called extracellular vesicles (EVs) transport biologically active cargo between cells, providing intercellular communication. The clinical application of EVs is limited due to the lack of scalable and cost-effective approaches for their production and purification, as well as effective loading strategies.MethodsHere we used EV mimetics produced by cell treatment with the actin-destabilizing agent cytochalasin B as an alternative to EVs for the delivery of therapeutic nucleic acids.ResultsCytochalasin-B-inducible nanovesicles (CINVs) delivered a fully modified N-(methanesulfonyl)- or mesyl (µ-) antisense oligonucleotide to B16 melanoma cells, selectively decreasing the level of target microRNA-21 with effectiveness comparable to that observed upon Lipofectamine 2000-mediated delivery. The efficiency of the CINV-mediated delivery of plasmid DNA encoding EGFP varied depending on the type of recipient cells. Surprisingly, under experimental conditions, CINVs were unable to deliver both modified and natural short RNA duplexes—small interfering RNA and immunostimulatory RNA—probably due to their poor loading into CINVs.DiscussionCINVs demonstrated unique properties for the delivery of therapeutic nucleic acids, especially for antisense oligonucleotide-based therapy.
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- 2024
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6. Two-Dimensional Scanning of Circularly Polarized Beams via Array-Fed Fabry–Perot Cavity Antennas
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Mikhail Madji, Edoardo Negri, Walter Fuscaldo, Davide Comite, Alessandro Galli, and Paolo Burghignoli
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Fabry–Perot cavity antennas ,circular polarization ,phased arrays ,leaky-wave antennas ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
In this paper, we present an array-fed Fabry–Perot cavity antenna (FPCA) based on a partially reflecting sheet (PRS) capable of generating a circularly polarized (CP), highly directive, far-field radiation pattern in the 27–28.5 GHz frequency range. The PRS, the cavity, and the array of feeders serve to different purposes in this original structure. The PRS is engineered to produce a circular polarization from a linearly polarized source placed inside the cavity. The cavity is optimized to obtain a directive conical beam from the dipole-like pattern of the simple source, and allows for a frequency scan of the beam along the elevation plane. The array of feeders is designed to obtain a pencil beam whose azimuthal pointing direction can be controlled by properly phasing the sources. The radiation performance is studied with a specific application of the reciprocity theorem in a full-wave solver along with the pattern multiplication principle. A number of array-pattern configurations in terms of operation frequency and phase shift are investigated and presented to show the potential of the proposed solution in terms of design flexibility and radiation performance.
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- 2024
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7. Theory of angular momentum transfer from light to molecules
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Mikhail Maslov, Georgios M. Koutentakis, Mateja Hrast, Oliver H. Heckl, and Mikhail Lemeshko
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Physics ,QC1-999 - Abstract
We present a theory describing the interaction of structured light, such as light carrying orbital angular momentum, with molecules. The light-matter interaction Hamiltonian we derive is expressed through couplings between spherical gradients of the electric field and the (transition) electric multipole moments of a particle of any nontrivial rotation point group. Our model can therefore accommodate an arbitrary complexity of the molecular and electric field structure, and it can be straightforwardly extended to atoms or nanostructures. Applying this framework to rovibrational spectroscopy of molecules, we uncover the general mechanism of angular momentum exchange between the spin and orbital angular momenta of light, molecular rotation, and its center-of-mass motion. We show that the nonzero vorticity of Laguerre-Gaussian beams can strongly enhance certain rovibrational transitions that are considered forbidden in the case of nonhelical light. We discuss the experimental requirements for the observation of these forbidden transitions in state-of-the-art spatially resolved spectroscopy measurements.
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- 2024
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8. Biodiversity of aquatic organisms in the Mekong Delta, Vietnam
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Dmitriy Seleznev, Cu Nguyen Dinh, Truong Ba Hai, Evgeniia Karpova, Duong Thi Kim Chi, Dmitriy Kosolapov, Natalya Kosolapova, Mikhail Malin, Inga Malina, Le Quang Man, Alexander Prokin, Irina Prusova, Andrey Sharov, Svetlana Statkevich, Alexander Tsvetkov, Yuriy Udodenko, Viktor Zakonnov, Svetlana Zhdanova, Alexander Krylov, and Alexei V. Tiunov
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database ,Mekong Delta ,southern Vietnam ,aquatic ,Biology (General) ,QH301-705.5 - Abstract
The Mekong River is the 10th largest river in the world. It is recognised as the most productive river in Southeast Asia and economically essential to the region, with an estimated 60-65 million people living in the lower Mekong Basin. The Mekong Delta within Vietnam is considered a highly vulnerable ecosystem under threat from increasing anthropogenic pressure, such as dam construction and, as a consequence, the Delta is sinking and altering the natural hydrological cycle. Dams also lead to eutrophication and pollution of downstream water from regulated water flux and water stagnation. Another threat is climate change coupled with the lower rainfall, which could lead to an increased risk of drought in the Mekong Delta Basin. Thus, these project data represent an important baseline reference. The ecological health of the Mekong Delta’s environment, as indicated by the quality and availability of its water and biological resources, largely determines the economic and social development of the region, which produces about half of the agriculture and aquaculture products of Vietnam.This paper reports quantitative data on the biodiversity of six groups of aquatic organisms: bottom and pelagic fish, macrozoobenthos, microorganisms, phyto- and zooplankton in the Mekong Delta within Vietnam, as well as data on the physicochemical parameters of water and bottom sediments. The data were collected during 2018-2022 as part of the Ecolan E-3.4 programme within the framework of the research plan of the Joint Russian-Vietnamese Tropical Research and Technological Center. All presented datasets are published for the first time.
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- 2023
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9. A deep population reference panel of tandem repeat variation
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Helyaneh Ziaei Jam, Yang Li, Ross DeVito, Nima Mousavi, Nichole Ma, Ibra Lujumba, Yagoub Adam, Mikhail Maksimov, Bonnie Huang, Egor Dolzhenko, Yunjiang Qiu, Fredrick Elishama Kakembo, Habi Joseph, Blessing Onyido, Jumoke Adeyemi, Mehrdad Bakhtiari, Jonghun Park, Sara Javadzadeh, Daudi Jjingo, Ezekiel Adebiyi, Vineet Bafna, and Melissa Gymrek
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Science - Abstract
Abstract Tandem repeats (TRs) represent one of the largest sources of genetic variation in humans and are implicated in a range of phenotypes. Here we present a deep characterization of TR variation based on high coverage whole genome sequencing from 3550 diverse individuals from the 1000 Genomes Project and H3Africa cohorts. We develop a method, EnsembleTR, to integrate genotypes from four separate methods resulting in high-quality genotypes at more than 1.7 million TR loci. Our catalog reveals novel sequence features influencing TR heterozygosity, identifies population-specific trinucleotide expansions, and finds hundreds of novel eQTL signals. Finally, we generate a phased haplotype panel which can be used to impute most TRs from nearby single nucleotide polymorphisms (SNPs) with high accuracy. Overall, the TR genotypes and reference haplotype panel generated here will serve as valuable resources for future genome-wide and population-wide studies of TRs and their role in human phenotypes.
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- 2023
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10. Toward the System Size Dependence of Anisotropic Flow in Heavy-Ion Collisions at sNN= 2–5 GeV
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Mikhail Mamaev and Arkadiy Taranenko
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heavy-ion collisions ,anisotropic flow ,BM@N ,Nuclotron ,NICA ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Abstract
The study of the high-density equation of state (EOS) and the search for a possible phase transition in dense baryonic matter is the main goal of beam energy scan programs with relativistic heavy ions at energies sNN= 2–5 GeV. The most stringent constraints currently available on the high-density EOS of symmetric nuclear matter come from the present measurements of directed (v1) and elliptic flow (v2) signals of protons in Au + Au collisions. In this energy range, the anisotropic flow is strongly affected by the presence of cold spectators due to the sizable passage time. The system size dependence of anisotropic flow may help to study the participant–spectator contribution and improve our knowledge of the EOS of symmetric nuclear matter. In this work, we discuss the layout of the upgraded BM@N experiment and the anticipated performance for differential anisotropic flow measurements of identified hadrons at Nuclotron energies: sNN= 2.3–3.5 GeV.
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- 2023
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11. The Leaky-Wave Perspective for Array-Fed Fabry–Perot Cavity and Bull’s-Eye Antennas
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Mikhail Madji, Edoardo Negri, Walter Fuscaldo, Davide Comite, Alessandro Galli, and Paolo Burghignoli
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leaky-wave antennas ,planar antennas ,phased arrays ,Fabry–Perot cavity antennas ,bull’s eye antenna ,orbital angular momentum ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Two-dimensional leaky-wave antennas (LWAs) are a class of planar, traveling-wave radiators with attractive features of a low profile, ease of feeding, frequency reconfigurability of the radiation pattern, and polarization agility. Their use in conjunction with array feeders has been the subject of various investigations in recent decades, thanks to the additional degrees of freedom provided by the presence of multiple independent sources. Here, we provide a review of some of the most recent and promising array-fed two-dimensional (2-D) LWAs, selecting a couple of the most significant structures in application, namely Fabry–Perot cavity antennas and bull’s-eye antennas, and discussing some of their recently proposed advanced features.
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- 2024
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12. Difference Schemes for Differential Equations with a Polynomial Right-Hand Side, Defining Birational Correspondences
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Mikhail Malykh, Edik Ayryan, Lyubov Lapshenkova, and Leonid Sevastianov
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finite difference method ,dynamical systems ,computer algebra ,birational map ,Cremona transformation ,Mathematics ,QA1-939 - Abstract
This paper explores the numerical intergator of ODE based on combination of Appelroth’s quadratization of dynamical systems with polynomial right-hand sides and Kahan’s discretization method. Utilizing Appelroth’s technique, we reduce any system of ordinary differential equations with a polynomial right-hand side to a quadratic form, enabling the application of Kahan’s method. In this way, we get a difference scheme defining the one-to-one correspondence between the initial and final positions of the system (Cremona map). It provides important information about the Kahan method for differential equations with a quadratic right-hand side, because we obtain dynamical systems with a quadratic right-hand side that have movable branch points. We analyze algebraic properties of solutions obtained through this approach, showing that (1) the Kahan scheme describes the branch points as poles, significantly deviating from the behavior of the exact solution of the problem near these points, and (2) it disrupts algebraic invariant variety, in particular integral relations describing the relationship between old and Appelroth’s variables. This study advances numerical methods, emphasizing the possibility of designing difference schemes whose algebraic properties differ significantly from those of the initial dynamical system.
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- 2024
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13. On the Selection of Weights for Difference Schemes to Approximate Systems of Differential Equations
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Viktor Kadrov, Mikhail Malykh, and Alexander Zorin
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finite difference method ,dynamical systems ,computer algebra ,Mathematics ,QA1-939 - Abstract
We consider the problem of determining the weights of difference schemes whose form is specified by a particular symbolic expression. The order of approximation of the differential equation is equal to a given number. To solve it, it was propose to proceed from considering systems of differential equations of a general form to one scalar equation. This method provides us with some values for the weights, which we propose to test using Richardson’s method. The method was shown to work in the case of low-order schemes. However, when transitioning from the scalar problem to the vector and nonlinear problems, the reduction of the order of the scheme, whose weights are selected for the scalar problem, occurs in different families of schemes. This was first discovered when studying the Shanks scheme, which belongs to the family of explicit Runge–Kutta schemes. This does not deteriorate the proposed strategy itself concerning the simplification of the weight-determination problem, which should include a clause on mandatory testing of the order using the Richardson method.
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- 2024
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14. Spin squeezing with itinerant dipoles: A case for shallow lattices
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David Wellnitz, Mikhail Mamaev, Thomas Bilitewski, and Ana Maria Rey
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Physics ,QC1-999 - Abstract
Entangled spin squeezed states generated via dipolar interactions in lattice models provide unique opportunities for quantum enhanced sensing and are now within reach of current experiments. A critical question in this context is which parameter regimes offer the best prospects under realistic conditions. Light scattering in deep lattices can induce significant decoherence and strong Stark shifts, while shallow lattices face motional decoherence as a fundamental obstacle. Here we analyze the interplay between motion and spin squeezing in itinerant fermionic dipoles in one dimensional chains using exact matrix product state simulations. We demonstrate that shallow lattices can achieve more than 5 dB of squeezing, outperforming deep lattices by up to more than 3 dB, even in the presence of low filling, loss, and decoherence. We relate this finding to SU(2)-symmetric superexchange interactions, which keep spins aligned and protect collective correlations. We show that the optimal regime is achieved for small repulsive off-site interactions, with a trade-off between maximal squeezing and optimal squeezing time.
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- 2024
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15. Molecular modeling and phylogenetic analyses highlight the role of amino acid 347 of the N1 subtype neuraminidase in influenza virus host range and interspecies adaptation
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Stefano Elli, Giuseppina Raffaini, Marco Guerrini, Sergei Kosakovsky Pond, and Mikhail Matrosovich
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influenza ,neuraminidase ,substrate specificity ,MD simulation ,natural selection ,H5N1 ,Microbiology ,QR1-502 - Abstract
The N1 neuraminidases (NAs) of avian and pandemic human influenza viruses contain tyrosine and asparagine, respectively, at position 347 on the rim of the catalytic site; the biological significance of this difference is not clear. Here, we used molecular dynamics simulation to model the effects of amino acid 347 on N1 NA interactions with sialyllacto-N-tetraoses 6’SLN-LC and 3’SLN-LC, which represent NA substrates in humans and birds, respectively. Our analysis predicted that Y347 plays an important role in the NA preference for the avian-type substrates. The Y347N substitution facilitates hydrolysis of human-type substrates by resolving steric conflicts of the Neu5Ac2–6Gal moiety with the bulky side chain of Y347, decreasing the free energy of substrate binding, and increasing the solvation of the Neu5Ac2–6Gal bond. Y347 was conserved in all N1 NA sequences of avian influenza viruses in the GISAID EpiFlu database with two exceptions. First, the Y347F substitution was present in the NA of a specific H6N1 poultry virus lineage and was associated with the substitutions G228S and/or E190V/L in the receptor-binding site (RBS) of the hemagglutinin (HA). Second, the highly pathogenic avian H5N1 viruses of the Gs/Gd lineage contained sporadic variants with the NA substitutions Y347H/D, which were frequently associated with substitutions in the HA RBS. The Y347N substitution occurred following the introductions of avian precursors into humans and pigs with N/D347 conserved during virus circulation in these hosts. Comparative evolutionary analysis of site 347 revealed episodic positive selection across the entire tree and negative selection within most host-specific groups of viruses, suggesting that substitutions at NA position 347 occurred during host switches and remained under pervasive purifying selection thereafter. Our results elucidate the role of amino acid 347 in NA recognition of sialoglycan substrates and emphasize the significance of substitutions at position 347 as a marker of host range and adaptive evolution of influenza viruses.
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- 2023
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16. Sociology of the Lesson: Discourse Organization of Successful Teaching Practices
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Pavel Sergomanov, Mikhail Maltsev, Nadezhda Bysik, Vadim Beketov, and Rustam Baiburin
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sociology of school life ,school ,ethnographic methods in education studies ,successful teaching practices ,discourse analysis ,Education (General) ,L7-991 - Abstract
In this article, we analyze successful teaching practices (practices that ensure students’ academic progress and well-being) in their social projection, using videos of the lessons as the material for analysis. Unlike traditional assessments of pedagogical skills (compliance with norms and professional standards), the article focuses on the sociological dimension of a teacher’s work — how the social aspect of the lesson is arranged, what practices teachers use to improve student results, how the class is organized as a social community. We recorded videos of lessons (N = 74) conducted by 11 teachers in the 5th-8th grades in 4 non-selective academically successful secondary schools in 3 regional centers of Russia. We used it as the material for the analysis of successful teaching practices. To analyze the data, we used critical converse analyses in the vein of Norman Fairclough, which involves the division of a communicative event into linguistic, processing and social levels. Successful teaching practice at the linguistic level can be characterized by the use of markers of control and care, as well as switching modes of responsibility attribution («I»/«We»/«You»/«you»). At the processing level, the following is stated: a) the use of metaphors and student assessment systems that regulate the situational context; b) labeling the symbolic boundaries of the lesson, which normalizes the educational process. At the social level, we conclude that one of the main conditions for the success of teacher practices is the control over the structural integrity of the lesson. The results of the article can be used in professional development programs for teachers.
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- 2023
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17. Rapid shift in greenhouse forcing of emerging arctic peatlands
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Torben R. Christensen, Johan Scheller, Maria Scheel, Daniel Alexander Rudd, Marcin Jackowicz-Korczynski, Mikhail Mastepanov, and Efrén López-Blanco
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Medicine ,Science - Abstract
Abstract In this study, we hypothesised that the actual development stage (i.e., current age of the ecosystem) is a determining factor for the magnitude of methane production and emissions in young, northern high-latitude peatlands. We demonstrate that the earliest development of peat soil imposes a sink-to-source shift in the greenhouse warming potential of emerging peatlands in response to climate change that holds feedback mechanisms of importance for short-term (
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- 2023
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18. Feasibility Studies for the Measurement of Open-Charm Mesons at ALICE-3 Using Decay Channels with Neutral Mesons and Photons in the Final State
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Mikhail Malaev and Victor Riabov
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relativistic heavy-ion collisions ,open charm ,heavy flavor ,particle reconstruction ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Abstract
ALICE-3 is being designed as a next-generation heavy-ion experiment to be operated at the high-luminosity Large Hadron Collider. With luminosities higher by a factor of fifty, ALICE-3 will be able to study5 properties of quark–gluon matter with probes and precision which were previously unavailable due to small cross sections, high background levels, and insufficient detector sensitivity. In particular, the properties of hot and dense QCD matter will be studied by measuring production cross sections, flow coefficients, azimuthal angular correlations and nuclear modification factors for open-charm hadrons. In this contribution, we present the results of feasibility studies for the measurement of ground and excited states of open-charm mesons in decay channels D0 → K− + π+ + π0, D*(2007)0 → D0 + γ and D*(2010)± → D0 + π± in pp, p-Pb and Pb-Pb collisions at LHC energies using the ALICE-3 experimental setup. We formulate the main requirements for the selection of particles and their combinations to ensure reliable signal extraction in a wide transverse momentum range and estimate the minimum size of the required data samples. The results obtained are also compared to previous findings for the open-charm measurements in different decay channels.
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- 2023
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19. 154 Universal synthetic spike-in controls for accurate adaptive immune receptor profiling
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Alex Chenchik, Mikhail Makhanov, Tianbing Liu, Dongfang Hu, and Paul Diehl
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2023
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20. 165 Microsampling for RNA biomarker profiling in blood
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Alex Chenchik, Mikhail Makhanov, and Lester Kobzik
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2023
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21. Using in silico tools to predict flame retardant metabolites for more informative exposomics-based approaches
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Breanne Kincaid, Przemyslaw Piechota, Emily Golden, Mikhail Maertens, Thomas Hartung, and Alexandra Maertens
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in silico spectra ,metabolite prediction ,exposomics ,flame retardant (FR) ,metabolomics ,hazard assessment ,Toxicology. Poisons ,RA1190-1270 - Abstract
Introduction: The positive identification of xenobiotics and their metabolites in human biosamples is an integral aspect of exposomics research, yet challenges in compound annotation and identification continue to limit the feasibility of comprehensive identification of total chemical exposure. Nonetheless, the adoption of in silico tools such as metabolite prediction software, QSAR-ready structural conversion workflows, and molecular standards databases can aid in identifying novel compounds in untargeted mass spectral investigations, permitting the assessment of a more expansive pool of compounds for human health hazard. This strategy is particularly applicable when it comes to flame retardant chemicals. The population is ubiquitously exposed to flame retardants, and evidence implicates some of these compounds as developmental neurotoxicants, endocrine disruptors, reproductive toxicants, immunotoxicants, and carcinogens. However, many flame retardants are poorly characterized, have not been linked to a definitive mode of toxic action, and are known to share metabolic breakdown products which may themselves harbor toxicity. As U.S. regulatory bodies begin to pursue a subclass- based risk assessment of organohalogen flame retardants, little consideration has been paid to the role of potentially toxic metabolites, or to expanding the identification of parent flame retardants and their metabolic breakdown products in human biosamples to better inform the human health hazards imposed by these compounds.Methods: The purpose of this study is to utilize publicly available in silico tools to 1) characterize the structural and metabolic fates of proposed flame retardant classes, 2) predict first pass metabolites, 3) ascertain whether metabolic products segregate among parent flame retardant classification patterns, and 4) assess the existing coverage in of these compounds in mass spectral database.Results: We found that flame retardant classes as currently defined by the National Academies of Science, Engineering and Medicine (NASEM) are structurally diverse, with highly variable predicted pharmacokinetic properties and metabolic fates among member compounds. The vast majority of flame retardants (96%) and their predicted metabolites (99%) are not present in spectral databases, posing a challenge for identifying these compounds in human biosamples. However, we also demonstrate the utility of publicly available in silico methods in generating a fit for purpose synthetic spectral library for flame retardants and their metabolites that have yet to be identified in human biosamples.Discussion: In conclusion, exposomics studies making use of fit-for-purpose synthetic spectral databases will better resolve internal exposure and windows of vulnerability associated with complex exposures to flame retardant chemicals and perturbed neurodevelopmental, reproductive, and other associated apical human health impacts.
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- 2023
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22. Vegetation type is an important predictor of the arctic summer land surface energy budget
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Jacqueline Oehri, Gabriela Schaepman-Strub, Jin-Soo Kim, Raleigh Grysko, Heather Kropp, Inge Grünberg, Vitalii Zemlianskii, Oliver Sonnentag, Eugénie S. Euskirchen, Merin Reji Chacko, Giovanni Muscari, Peter D. Blanken, Joshua F. Dean, Alcide di Sarra, Richard J. Harding, Ireneusz Sobota, Lars Kutzbach, Elena Plekhanova, Aku Riihelä, Julia Boike, Nathaniel B. Miller, Jason Beringer, Efrén López-Blanco, Paul C. Stoy, Ryan C. Sullivan, Marek Kejna, Frans-Jan W. Parmentier, John A. Gamon, Mikhail Mastepanov, Christian Wille, Marcin Jackowicz-Korczynski, Dirk N. Karger, William L. Quinton, Jaakko Putkonen, Dirk van As, Torben R. Christensen, Maria Z. Hakuba, Robert S. Stone, Stefan Metzger, Baptiste Vandecrux, Gerald V. Frost, Martin Wild, Birger Hansen, Daniela Meloni, Florent Domine, Mariska te Beest, Torsten Sachs, Aram Kalhori, Adrian V. Rocha, Scott N. Williamson, Sara Morris, Adam L. Atchley, Richard Essery, Benjamin R. K. Runkle, David Holl, Laura D. Riihimaki, Hiroki Iwata, Edward A. G. Schuur, Christopher J. Cox, Andrey A. Grachev, Joseph P. McFadden, Robert S. Fausto, Mathias Göckede, Masahito Ueyama, Norbert Pirk, Gijs de Boer, M. Syndonia Bret-Harte, Matti Leppäranta, Konrad Steffen, Thomas Friborg, Atsumu Ohmura, Colin W. Edgar, Johan Olofsson, and Scott D. Chambers
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Science - Abstract
An international team of researchers finds high potential for improving climate projections by a more comprehensive treatment of largely ignored Arctic vegetation types, underscoring the importance of Arctic energy exchange measuring stations.
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- 2022
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23. Winters are changing: snow effects on Arctic and alpine tundra ecosystems1
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Christian Rixen, Toke Thomas Høye, Petr Macek, Rien Aerts, Juha M. Alatalo, Jill T. Anderson, Pieter A. Arnold, Isabel C Barrio, Jarle W. Bjerke, Mats P. Björkman, Daan Blok, Gesche Blume-Werry, Julia Boike, Stef Bokhorst, Michele Carbognani, Casper T. Christiansen, Peter Convey, Elisabeth J. Cooper, J. Hans C. Cornelissen, Stephen J. Coulson, Ellen Dorrepaal, Bo Elberling, Sarah C. Elmendorf, Cassandra Elphinstone, T’ai G.W. Forte, Esther R. Frei, Sonya R. Geange, Friederike Gehrmann, Casey Gibson, Paul Grogan, Aud Helen Halbritter, John Harte, Gregory H.R. Henry, David W. Inouye, Rebecca E. Irwin, Gus Jespersen, Ingibjörg Svala Jónsdóttir, Ji Young Jung, David H. Klinges, Gaku Kudo, Juho Lämsä, Hanna Lee, Jonas J. Lembrechts, Signe Lett, Joshua Scott Lynn, Hjalte M.R. Mann, Mikhail Mastepanov, Jennifer Morse, Isla H. Myers-Smith, Johan Olofsson, Riku Paavola, Alessandro Petraglia, Gareth K. Phoenix, Philipp Semenchuk, Matthias B. Siewert, Rachel Slatyer, Marko J. Spasojevic, Katharine Suding, Patrick Sullivan, Kimberly L. Thompson, Maria Väisänen, Vigdis Vandvik, Susanna Venn, Josefine Walz, Robert Way, Jeffrey M. Welker, Sonja Wipf, and Shengwei Zong
- Subjects
review ,tundra ,ground temperatures ,snow experiments ,ITEX ,synthèse ,Environmental sciences ,GE1-350 ,Environmental engineering ,TA170-171 - Abstract
Snow is an important driver of ecosystem processes in cold biomes. Snow accumulation determines ground temperature, light conditions, and moisture availability during winter. It also affects the growing season’s start and end, and plant access to moisture and nutrients. Here, we review the current knowledge of the snow cover’s role for vegetation, plant-animal interactions, permafrost conditions, microbial processes, and biogeochemical cycling. We also compare studies of natural snow gradients with snow experimental manipulation studies to assess time scale difference of these approaches. The number of tundra snow studies has increased considerably in recent years, yet we still lack a comprehensive overview of how altered snow conditions will affect these ecosystems. Specifically, we found a mismatch in the timing of snowmelt when comparing studies of natural snow gradients with snow manipulations. We found that snowmelt timing achieved by snow addition and snow removal manipulations (average 7.9 days advance and 5.5 days delay, respectively) were substantially lower than the temporal variation over natural spatial gradients within a given year (mean range 56 days) or among years (mean range 32 days). Differences between snow study approaches need to be accounted for when projecting snow dynamics and their impact on ecosystems in future climates.
- Published
- 2022
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24. Regulation of molecular weight, molecular weight distribution and branching distribution in polyethylene, produced by supported catalysts bearing bis(imino)pyridyl Fe(II) and N,N-α-diimine Ni(II) complexes
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Nina Semikolenova, Valentina Panchenko, Mikhail Matsko, and Vladimir Zakharov
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ethylene polymerization ,supported catalysts ,bis(imino)pyridyl complex of fe ,diimine complex of ni ,molecular weight distribution ,Polymers and polymer manufacture ,TP1080-1185 - Abstract
For preparation of highly active supported catalyst with bis(imino)pyridyl Fe(II) complexes (Fe1, Fe2) and N,N-α-diimine complex of Ni (Ni3), silica modified with alumina (SiO2 (Al)) was used as a support. Data on the possibility to regulate molecular weight (MW) and molecular weight distribution (MWD) of polyethylene (PE), produced over the supported catalyst Fe1/SiO2 (Al)+TIBA by variation of polymerization temperature and the addition of hydrogen and hexene-1, are obtained. The prepared PE samples were characterized by Mw values varied from 80 to 350 kg/mol and various MMD (Mw/Mn=4.6-11.7).By grafting on SiO2(Al) of two different iron bis(imino)pyridyl complexes, producing PE with diverse MW, bi-component catalyst was prepared. This catalyst generates linear PE with broad and bimodal MWD (Mw/Mn=33). Fixation on SiO2(Al) of α-diimine Ni(II) pre-catalyst (Ni3), yielding high molecular weight branched PE at the ethylene homopolymerization, and bis(imino)pyridyl Fe(II) complex (Fe2) that forms lower molecular weight linear PE, affords formation of a new bi-component catalyst. The catalyst produces PE with broad MWD and high content of branches concentrated in high molecular weight PE fraction.
- Published
- 2022
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25. Towards Flexible and Low-Power Wireless Smart Sensors: Reconfigurable Analog-to-Feature Conversion for Healthcare Applications
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Mikhail Manokhin, Paul Chollet, and Patricia Desgreys
- Subjects
analog-to-feature converter ,low power ,wireless smart sensors ,non-uniform wavelet sampling ,feature selection ,arrhythmia detection ,Chemical technology ,TP1-1185 - Abstract
Analog-to-feature (A2F) conversion based on non-uniform wavelet sampling (NUWS) has demonstrated the ability to reduce energy consumption in wireless sensors while employed for electrocardiogram (ECG) anomaly detection. The technique involves extracting only relevant features for a given task directly from analog signals and conducting classification in the digital domain. Building on this approach, we extended the application of the proposed generic A2F converter to address a human activity recognition (HAR) task. The performed simulations include the training and evaluation of neural network (NN) classifiers built for each application. The corresponding results enabled the definition of valuable features and the hardware specifications for the ongoing complete circuit design. One of the principal elements constituting the developed converter, the integrator brought from the state-of-the-art design, was modified and simulated at the circuit level to meet our requirements. The revised value of its power consumption served to estimate the energy spent by the communication chain with the A2F converter. It consumes at least 20 and 5 times less than the chain employing the Nyquist approach in arrhythmia detection and HAR tasks, respectively. This fact highlights the potential of A2F conversion with NUWS in achieving flexible and energy-efficient sensor systems for diverse applications.
- Published
- 2024
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26. Finite Difference Models of Dynamical Systems with Quadratic Right-Hand Side
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Mikhail Malykh, Mark Gambaryan, Oleg Kroytor, and Alexander Zorin
- Subjects
finite difference method ,dynamical systems ,Cremona transformations ,Mathematics ,QA1-939 - Abstract
Difference schemes that approximate dynamic systems are considered discrete models of the same phenomena that are described by continuous dynamic systems. Difference schemes with t-symmetry and midpoint and trapezoid schemes are considered. It is shown that these schemes are dual to each other, and, from this fact, we derive theorems on the inheritance of quadratic integrals by these schemes (Cooper’s theorem and its dual theorem on the trapezoidal scheme). Using examples of nonlinear oscillators, it is shown that these schemes poses challenges for theoretical research and practical application due to the problem of extra roots: these schemes do not allow one to unambiguously determine the final values from the initial values and vice versa. Therefore, we consider difference schemes in which the transitions from layer to layer in time are carried out using birational transformations (Cremona transformations). Such schemes are called reversible. It is shown that reversible schemes with t-symmetry can be easily constructed for any dynamical system with a quadratic right-hand side. As an example of such a dynamic system, a top fixed at its center of gravity is considered in detail. In this case, the discrete theory repeats the continuous theory completely: (1) the points of the approximate solution lie on some elliptic curve, which at Δt→0 turns into an integral curve; (2) the difference scheme can be represented using quadrature; and (3) the approximate solution can be represented using an elliptic function of a discrete argument. The last section considers the general case. The integral curves are replaced with closures of the orbits of the corresponding Cremona transformation as sets in the projective space over R. The problem of the dimension of this set is discussed.
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- 2024
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27. Thermal Conductivity Gas Sensors for High-Temperature Applications
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Nikolay Samotaev, Boris Podlepetsky, Mikhail Mashinin, Igor Ivanov, Ivan Obraztsov, Konstantin Oblov, and Pavel Dzhumaev
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thermal conductivity ,ceramic ,platinum wire ,micromachining ,laser micromilling ,Mechanical engineering and machinery ,TJ1-1570 - Abstract
This paper describes a fast and flexible microfabrication method for thermal conductivity gas sensors useful in high-temperature applications. The key parts of the sensor, the microheater and the package, were fabricated from glass-coated platinum wire and the combination of laser micromilling (ablation) of already-sintered monolithic ceramic materials and thick-film screen-printing technologies. The final thermal conductivity gas sensor was fabricated in the form of a complete MEMS device in a metal ceramic package, which could be used as a compact miniaturized surface-mounted device for soldering to standard PCB. Functional test results of the manufactured sensor are presented, demonstrating their full suitability for gas sensing applications and indicating that the obtained parameters are at a level comparable to those of standard industrially produced sensors. The results of the design and optimization principles of applied methods are discussed with regard to possible wider applications in thermal gas sensor prototyping in the future. The advantage of the developed sensors is their ability to operate in air environments under high temperatures of 900 °C and above. The sensor element material and package metallization were insensitive to oxidation compared with classical sensor-solution-based metal–glass packages and silicone MEMS membranes, which exhibit mechanical stress at temperatures above 700 °C.
- Published
- 2024
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28. Catchment-scale thawing and greening decreases long-term nitrogen export in NE Greenland
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Shannon L Speir, Jennifer L Tank, Ada Pastor, Marc F Muller, Mikhail Mastepanov, and Tenna Riis
- Subjects
climate change ,permafrost ,rivers ,ecosystem succession ,nutrient availability ,Environmental technology. Sanitary engineering ,TD1-1066 ,Environmental sciences ,GE1-350 ,Science ,Physics ,QC1-999 - Abstract
Climate change is expected to alter nitrogen (N) export from Arctic rivers, with potential implications for fragile coastal ecosystems and fisheries. Yet, the directionality of change is poorly understood, as increased mobilization of N in a ‘thawing’ Arctic is countered by higher rates of vegetative uptake in a ‘greening’ Arctic, particularly in the understudied region of Greenland. We use an unprecedented dataset of long-term ( n = 18 years) river chemistry, streamflow, and catchment-scale changes in snow and vegetation to document changing riverine N loss in Greenland. We documented decreasing inorganic and organic N loads, linked to decreasing snow stores, warming soils, and enhanced plant uptake. Higher variability in N export across years also points to the increasing role of high flow events in driving downstream N loss. This alteration in N cycling may significantly reduce both inorganic and organic N transport across the terrestrial-aquatic boundary during the open water season in a rapidly warming Greenland.
- Published
- 2024
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29. Flat Spectra of Energetic Particles in Interplanetary Shock Precursors
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Mikhail Malkov, Joe Giacalone, and Fan Guo
- Subjects
Interplanetary shocks ,Interplanetary particle acceleration ,Astrophysics ,QB460-466 - Abstract
The observed energy spectra of accelerated particles at interplanetary shocks often do not match the diffusive shock acceleration (DSA) theory predictions. In some cases, the particle flux forms a plateau over a wide range of energies, extending upstream of the shock for up to seven flux e -folds before submerging into the background spectrum. Remarkably, at and downstream of the shock we have studied in detail, the flux falls off in energy as ϵ ^−1 , consistent with the DSA prediction for a strong shock. The upstream plateau suggests a particle transport mechanism different from those traditionally employed in DSA models. We show that a standard (linear) DSA solution based on a widely accepted diffusive particle transport with an underlying resonant wave–particle interaction is inconsistent with the plateau in the particle flux. To resolve this contradiction, we modify the DSA theory in two ways. First, we include a dependence of the particle diffusivity κ on the particle flux F (nonlinear particle transport). Second, we invoke short-scale magnetic perturbations that are self-consistently generated by, but not resonant with, accelerated particles. They lead to the particle diffusivity increasing with the particle energy as ∝ ϵ ^3/2 that simultaneously decreases with the particle flux as 1/ F . The combination of these two trends results in the flat spectrum upstream. We speculate that nonmonotonic spatial variations of the upstream spectrum, apart from being time-dependent, may also result from non-DSA acceleration mechanisms at work upstream, such as stochastic Fermi or magnetic pumping acceleration.
- Published
- 2024
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30. ДЕЯТЕЛЬНОСТНО-КОМПЕТЕНТНОСТНЫЙ ПОДХОД В ФОРМИРОВАНИИ ФИЗИЧЕСКОЙ КУЛЬТУРЫ ЛИЧНОСТИ
- Author
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Alexander Kudrya, Mikhail Malashenko, and Dmitry Solodovnyk
- Subjects
физическое совершенство ,физическое здоровье ,формирование физической культуры личности ,компетентность ,уровень компетентности ,общий набор формируемых компетенций ,physical perfection ,physical health ,physical culture forming identity ,competence ,competence level ,formed a common set of competencies ,Economics as a science ,HB71-74 - Abstract
The article discusses the technological structure is a qualitative, systematic and dynamic state, characterized by a certain level of knowledge and intellectual ability, motivation and value orientations, social and spiritual values, physical perfection extrapolated through the emotional and volitional manifestations in culture, lifestyle, spiritual and physical health.
- Published
- 2022
31. Electro-optic characterization of synthesized infrared-visible light fields
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Enrico Ridente, Mikhail Mamaikin, Najd Altwaijry, Dmitry Zimin, Matthias F. Kling, Vladimir Pervak, Matthew Weidman, Ferenc Krausz, and Nicholas Karpowicz
- Subjects
Science - Abstract
A continuum spanning from 300 and 3000 nm is used to synthesize a single-cycle field transient and measure its waveform through electro-optic sampling, speeding up this sensitive technique so that it can access the electric field of visible light.
- Published
- 2022
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32. Earlier snowmelt may lead to late season declines in plant productivity and carbon sequestration in Arctic tundra ecosystems
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Donatella Zona, Peter M. Lafleur, Koen Hufkens, Barbara Bailey, Beniamino Gioli, George Burba, Jordan P. Goodrich, Anna K. Liljedahl, Eugénie S. Euskirchen, Jennifer D. Watts, Mary Farina, John S. Kimball, Martin Heimann, Mathias Göckede, Martijn Pallandt, Torben R. Christensen, Mikhail Mastepanov, Efrén López-Blanco, Marcin Jackowicz-Korczynski, Albertus J. Dolman, Luca Belelli Marchesini, Roisin Commane, Steven C. Wofsy, Charles E. Miller, David A. Lipson, Josh Hashemi, Kyle A. Arndt, Lars Kutzbach, David Holl, Julia Boike, Christian Wille, Torsten Sachs, Aram Kalhori, Xia Song, Xiaofeng Xu, Elyn R. Humphreys, Charles D. Koven, Oliver Sonnentag, Gesa Meyer, Gabriel H. Gosselin, Philip Marsh, and Walter C. Oechel
- Subjects
Medicine ,Science - Abstract
Abstract Arctic warming is affecting snow cover and soil hydrology, with consequences for carbon sequestration in tundra ecosystems. The scarcity of observations in the Arctic has limited our understanding of the impact of covarying environmental drivers on the carbon balance of tundra ecosystems. In this study, we address some of these uncertainties through a novel record of 119 site-years of summer data from eddy covariance towers representing dominant tundra vegetation types located on continuous permafrost in the Arctic. Here we found that earlier snowmelt was associated with more tundra net CO2 sequestration and higher gross primary productivity (GPP) only in June and July, but with lower net carbon sequestration and lower GPP in August. Although higher evapotranspiration (ET) can result in soil drying with the progression of the summer, we did not find significantly lower soil moisture with earlier snowmelt, nor evidence that water stress affected GPP in the late growing season. Our results suggest that the expected increased CO2 sequestration arising from Arctic warming and the associated increase in growing season length may not materialize if tundra ecosystems are not able to continue sequestering CO2 later in the season.
- Published
- 2022
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33. Changes in gene body methylation do not correlate with changes in gene expression in Anthozoa or Hexapoda
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Groves Dixon and Mikhail Matz
- Subjects
Epigenetics ,DNA methylation ,Gene regulation ,Plasticity ,Transcriptomics ,Gene body methylation ,Biotechnology ,TP248.13-248.65 ,Genetics ,QH426-470 - Abstract
Abstract Background As human activity alters the planet, there is a pressing need to understand how organisms adapt to environmental change. Of growing interest in this area is the role of epigenetic modifications, such as DNA methylation, in tailoring gene expression to fit novel conditions. Here, we reanalyzed nine invertebrate (Anthozoa and Hexapoda) datasets to validate a key prediction of this hypothesis: changes in DNA methylation in response to some condition correlate with changes in gene expression. Results In accord with previous observations, baseline levels of gene body methylation (GBM) positively correlated with transcription, and negatively correlated with transcriptional variation between conditions. Correlations between changes in GBM and transcription, however, were negligible. There was also no consistent negative correlation between methylation and transcription at the level of gene body methylation class (either highly- or lowly-methylated), anticipated under the previously described “seesaw hypothesis”. Conclusion Our results do not support the direct involvement of GBM in regulating dynamic transcriptional responses in invertebrates. If changes in DNA methylation regulate invertebrate transcription, the mechanism must involve additional factors or regulatory influences.
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- 2022
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34. On a Possible Approach to Risk Prediction of Recurrence of Atrial Fibrillation аfter Catheter Ablation According to Data from the Pre-procedure Period
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Iskren Garvanski, Mikhail Matveev, Vessela Krasteva, Todor Stoyanov, and Iana Simova
- Subjects
atrial fibrillation ,catheter ablation ,post-procedural recurrence of atrial ,fibrillation ,Biology (General) ,QH301-705.5 - Abstract
The aim of the study is to identify and evaluate predictors of recurrent paroxysms of atrial fibrillation (AF) paroxysms based on data from the preprocedural period among personal indices, history, comorbidities, ultrasound examination, and morphological components of f-waves, such as spectral amplitude and frequency. 39 patients with antral pulmonary vein isolation using radiofrequency or cryoenergy were included. Spectral analysis of f-waves was performed by fast Fourier transform of the ECG signal after suppression of the T-wave and QRS-complex. The performed U-test for the difference between the amplitude and frequency indicators in the groups without and with recurrence of AF shows a significant difference between the amplitude values in the two studied groups of patients. Through a stepwise discriminant analysis of a total of 14 indicators, 5 reliably separated groups without and with recurrence were determined: Echo LV-EF, spectral amplitude of f-waves, heart failure, Stroke/TIA, diabetes. The discriminator synthesized on these indicеs classified among the 39 patient – 25 without relapse (group 1) and 14 with relapse (group 2), 3 patients wrong from group 1 to group 2 (false positive), or 12%, and 1 patient was wrong from group 2 to group 1 (false negative), or 7.1%. These results give grounds to accept the hypothesis that it is possible to develop a decision rule for determining the degree of risk of post-procedural recurrence of AF from pre-procedural period data.
- Published
- 2022
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35. Phenotypic effects of mutations observed in the neuraminidase of human origin H5N1 influenza A viruses.
- Author
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David Scheibner, Ahmed H Salaheldin, Ola Bagato, Luca M Zaeck, Ahmed Mostafa, Ulrike Blohm, Christin Müller, Ahmed F Eweas, Kati Franzke, Axel Karger, Alexander Schäfer, Marcel Gischke, Donata Hoffmann, Solène Lerolle, Xuguang Li, Hatem S Abd El-Hamid, Jutta Veits, Angele Breithaupt, Geert-Jan Boons, Mikhail Matrosovich, Stefan Finke, Stephan Pleschka, Thomas C Mettenleiter, Robert P de Vries, and Elsayed M Abdelwhab
- Subjects
Immunologic diseases. Allergy ,RC581-607 ,Biology (General) ,QH301-705.5 - Abstract
Global spread and regional endemicity of H5Nx Goose/Guangdong avian influenza viruses (AIV) pose a continuous threat for poultry production and zoonotic, potentially pre-pandemic, transmission to humans. Little is known about the role of mutations in the viral neuraminidase (NA) that accompanied bird-to-human transmission to support AIV infection of mammals. Here, after detailed analysis of the NA sequence of human H5N1 viruses, we studied the role of A46D, L204M, S319F and S430G mutations in virus fitness in vitro and in vivo. Although H5N1 AIV carrying avian- or human-like NAs had similar replication efficiency in avian cells, human-like NA enhanced virus replication in human airway epithelia. The L204M substitution consistently reduced NA activity of H5N1 and nine other influenza viruses carrying NA of groups 1 and 2, indicating a universal effect. Compared to the avian ancestor, human-like H5N1 virus has less NA incorporated in the virion, reduced levels of viral NA RNA replication and NA expression. We also demonstrate increased accumulation of NA at the plasma membrane, reduced virus release and enhanced cell-to-cell spread. Furthermore, NA mutations increased virus binding to human-type receptors. While not affecting high virulence of H5N1 in chickens, the studied NA mutations modulated virulence and replication of H5N1 AIV in mice and to a lesser extent in ferrets. Together, mutations in the NA of human H5N1 viruses play different roles in infection of mammals without affecting virulence or transmission in chickens. These results are important to understand the genetic determinants for replication of AIV in mammals and should assist in the prediction of AIV with zoonotic potential.
- Published
- 2023
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36. Suppressing small-scale self-focusing of high-power femtosecond pulses
- Author
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Mikhail Martyanov, Vladislav Ginzburg, Alexey Balakin, Sergey Skobelev, Dmitry Silin, Anton Kochetkov, Ivan Yakovlev, Alexey Kuzmin, Sergey Mironov, Ilya Shaikin, Sergey Stukachev, Andrey Shaykin, Efim Khazanov, and Alexander Litvak
- Subjects
B-integral ,cubic Kerr nonlinearity ,filamentation instability ,high-power femtosecond laser ,nonlinear post-compression ,Applied optics. Photonics ,TA1501-1820 - Abstract
It was shown experimentally that for a 65-fs 17-J pulse, the effect of filamentation instability, also known as small-scale self-focusing, is much weaker than that predicted by stationary and nonstationary theoretical models for high B-integral values. Although this discrepancy has been left unexplained at the moment, in practice no signs of filamentation may allow a breakthrough in nonlinear pulse post-compression at high laser energy.
- Published
- 2023
- Full Text
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37. eXawatt Center for Extreme Light Studies
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Efim Khazanov, Andrey Shaykin, Igor Kostyukov, Vladislav Ginzburg, Ivan Mukhin, Ivan Yakovlev, Alexander Soloviev, Ivan Kuznetsov, Sergey Mironov, Artem Korzhimanov, Denis Bulanov, Ilya Shaikin, Anton Kochetkov, Alexey Kuzmin, Mikhail Martyanov, Vladimir Lozhkarev, Mikhail Starodubtsev, Alexander Litvak, and Alexander Sergeev
- Subjects
high-power femtosecond lasers ,interaction of ultrarelativistic field with matter ,Applied optics. Photonics ,TA1501-1820 - Abstract
The eXawatt Center for Extreme Light Studies project aimed to create a large scientific infrastructure based on lasers with giant peak power. The project relies on the significant progress achieved in the last decade. The planned infrastructure will incorporate a unique light source with a pulse power of 600 PW using optical parametric chirped pulse amplification in large-aperture KD2PO4, deuterated potassium dihydrogen phosphate crystals. The interaction of such laser radiation with matter represents a completely new fundamental physics. The direct study of the space–time structure of vacuums and other unknown phenomena at the frontier of high-energy physics and the physics of superstrong fields will be challenged. Expected applications will include the development of compact particle accelerators, the generation of ultrashort pulses of hard X-ray and gamma radiation for material science enabling one to probe material samples with unprecedented spatial and temporal resolution, the development of new radiation and particle sources, etc. The paper is translation from Russian [Kvantovaya Elektronika 53, 95 (2023)].
- Published
- 2023
- Full Text
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38. A mobile observatory powered by sun and wind for near real time measurements of atmospheric, glacial, terrestrial, limnic and coastal oceanic conditions in remote off-grid areas
- Author
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Søren Rysgaard, Kim Bjerge, Wieter Boone, Egon Frandsen, Michael Graversen, Toke Thomas Høye, Bjarne Jensen, Geoffrey Johnen, Marcin Antoni Jackowicz-Korczynski, Jeffrey Taylor Kerby, Simon Kortegaard, Mikhail Mastepanov, Claus Melvad, Peter Schmidt Mikkelsen, Keld Mortensen, Carsten Nørgaard, Ebbe Poulsen, Tenna Riis, Lotte Sørensen, and Torben Røjle Christensen
- Subjects
Remote ,Arctic ,Environment ,Observatory ,Autonomous ,Near-real time ,Science (General) ,Q1-390 - Abstract
Climate change is rapidly altering the Arctic environment. Although long-term environmental observations have been made at a few locations in the Arctic, the incomplete coverage from ground stations is a main limitation to observations in these remote areas. Here we present a wind and sun powered multi-purpose mobile observatory (ARC-MO) that enables near real time measurements of air, ice, land, rivers, and marine parameters in remote off-grid areas. Two test units were constructed and placed in Northeast Greenland where they have collected data from cabled and wireless instruments deployed in the environment since late summer 2021. The two units can communicate locally via WiFi (units placed 25 km apart) and transmit near-real time data globally over satellite. Data are streamed live and accessible from (https://gios.org). The cost of one mobile observatory unit is c. 304.000€. These test units demonstrate the possibility for integrative and automated environmental data collection in remote coastal areas and could serve as models for a proposed global observatory system.
- Published
- 2022
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39. Combinatorics of triangular partitions
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François Bergeron and Mikhail Mazin
- Subjects
catalan combinatorics ,triangular partitions ,symmetric functions ,Mathematics ,QA1-939 - Published
- 2022
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40. On a Novel Approach to Correcting Temperature Dependencies in Magnetic Observatory Data
- Author
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Dmitry Kudin, Anatoly Soloviev, Mikhail Matveev, and Olga Shevaldysheva
- Subjects
magnetic observatories ,temperature correction ,quasi-definitive data ,INTERMAGNET ,absolute measurements ,variometer ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
High-quality geomagnetic measurements are widely used in both fundamental research of the magnetic field and numerous industrial applications. However, vector data measured by fluxgate sensors show a dependency on temperature due to sensitive coil core material and components of the sensor electronics. Here, we propose a new method for detecting and eliminating temperature dependence in magnetic observatory data. The method is designed to correct temperature drifts in variation vector magnetometer measurements when preparing quasi-definitive data according to an INTERMAGNET standard. A special feature of the method is the semi-automatic adjustment of localization intervals for temperature correction, which prevents boundary jumps and discontinuities in the course of sequential data processing over long intervals. The conservative nature of the approach implies the minimization of the original data amount subjected to correction. The described method is successfully applied in the routine monthly preparation of quasi-definitive data of the Saint Petersburg Observatory (IAGA-code SPG) and can be efficiently introduced at other magnetic observatories worldwide.
- Published
- 2023
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41. Correction: Verkhovskii et al. The Influence of Magnetic Composite Capsule Structure and Size on Their Trapping Efficiency in the Flow. Molecules 2022, 27, 6073
- Author
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Roman Verkhovskii, Alexey Ermakov, Oleg Grishin, Mikhail A. Makarkin, Ilya Kozhevnikov, Mikhail Makhortov, Anastasiia Kozlova, Samia Salem, Valery Tuchin, and Daniil Bratashov
- Subjects
n/a ,Organic chemistry ,QD241-441 - Abstract
In the original publication [...]
- Published
- 2023
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42. Topic Modeling of Russian-Language Texts Using the Parts-of-Speech Composition of Topics (on the Example of Volunteer Movement Semantics in Social Media)
- Author
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Anna Maltseva, Natalia Shilkina, Olesia Makhnytkina, Evgenii Evseev, and Mikhail Matveev
- Subjects
probabilistic topic model ,topic modeling ,social media ,volunteer movement ,vector space model ,latent dirichlet allocation ,Telecommunication ,TK5101-6720 - Abstract
The article presents a new approach to topic modeling of texts - this is topic modeling based on part-of-speech topics. We do not consider parts of the speech as a gnoseological concept that reflects the way in which language is formally classified. We believe that parts of speech are within the language competence of the person and are used in the process of communication, performing a certain function in the communication process. The essence of topic modeling is seen as the creation of semantic models of the text corpus. The goal is to study the speech representation of modern movements and communities. The hypothesis is that the forums of a social movement reflect its characteristics, the nature, and activities of this movement. Three groups of the Russian social media VKontakte were chosen as an empirical object: ""All for the Victory!"", ""Center of (City) Volunteers of St. Petersburg,"" ""Volunteers of St. Petersburg."" Topic modeling was carried out using the latent Dirichlet allocation (LDA) method, implemented in the Gensim package along with the Mallet implementation. Model quality validation was carried out using the coherence coefficient. The described approach to the analysis of web texts of volunteer semantics based on the part-of-speech composition of topics made it possible to identify signs that characterize group identity, emotionality, and joint activities of Russian volunteers.
- Published
- 2021
- Full Text
- View/download PDF
43. Reconstruction of Photon Conversions in the MPD Experiment
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Evgeny Kryshen, Dmitry Ivanishchev, Dmitry Kotov, Mikhail Malaev, Victor Riabov, and Yuriy Ryabov
- Subjects
photon conversions ,thermal photons ,MPD experiment ,NICA ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Abstract
Spectra of thermal photons carry important information on the temperature of the hot and dense medium produced in heavy ion collisions. Photons can be measured via their conversion into electron-positron pairs in the detector material. In this contribution, challenges in the photon reconstruction are discussed and feasibility studies on photon conversion measurements in the future multipurpose detector (MPD) experiment at NICA are presented. The obtained results indicate good prospects for thermal photon measurements.
- Published
- 2021
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44. GIS for location planning of banks’ physical networks
- Author
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Daniil Maximenko and Mikhail Maximenko
- Subjects
location factors ,banks’ physical network ,isochrones map ,agricultural business ,spatial analysis ,Regional economics. Space in economics ,HT388 ,Regional planning ,HT390-395 - Abstract
Spatial aspects are often crucial for agriculture-related companies. This paper presents how methods of spatial analysis can help to elaborate regional network planning strategy for a large agricultural bank. Corporate reporting microdata, a novel source for the research of Russian business, were processed and visualized with geographical information system (GIS). The overlay of agribusiness clusters and bank accessibility zones revealed uneven patterns of its current branch network. This approach was applicable as a first step for the location choice strategy. The results allowed us to propose a new office location in order to cover territories for the further development of the bank.
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- 2021
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45. Resonance Reconstruction in the MPD
- Author
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Dmitry Ivanishchev, Dmitry Kotov, Mikhail Malaev, Victor Riabov, and Yury Ryabov
- Subjects
resonances ,hadron gas ,heavy-ion collisions ,MPD ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Abstract
The study of hadronic resonance production is an essential part of the physical programs of many heavy-ion experiments. Detailed measurement of the resonance properties is also foreseen in the future Multi-Purpose Detector (MPD) experiment at the NICA collider. In this report, we focus on the experimental challenges for the reconstruction of resonances in heavy-ion experiments and examine the MPD capabilities for the reconstruction of ρ(770)0, K*(892)0,±, φ(1020), Λ(1520), Σ(1385)± and Ξ(1530)0.
- Published
- 2021
- Full Text
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46. An automated protocol for modelling peptide substrates to proteases
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Rodrigo Ochoa, Mikhail Magnitov, Roman A. Laskowski, Pilar Cossio, and Janet M. Thornton
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Proteases ,Peptides ,Promiscuity ,Bioinformatics ,Structure ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Biology (General) ,QH301-705.5 - Abstract
Abstract Background Proteases are key drivers in many biological processes, in part due to their specificity towards their substrates. However, depending on the family and molecular function, they can also display substrate promiscuity which can also be essential. Databases compiling specificity matrices derived from experimental assays have provided valuable insights into protease substrate recognition. Despite this, there are still gaps in our knowledge of the structural determinants. Here, we compile a set of protease crystal structures with bound peptide-like ligands to create a protocol for modelling substrates bound to protease structures, and for studying observables associated to the binding recognition. Results As an application, we modelled a subset of protease–peptide complexes for which experimental cleavage data are available to compare with informational entropies obtained from protease–specificity matrices. The modelled complexes were subjected to conformational sampling using the Backrub method in Rosetta, and multiple observables from the simulations were calculated and compared per peptide position. We found that some of the calculated structural observables, such as the relative accessible surface area and the interaction energy, can help characterize a protease’s substrate recognition, giving insights for the potential prediction of novel substrates by combining additional approaches. Conclusion Overall, our approach provides a repository of protease structures with annotated data, and an open source computational protocol to reproduce the modelling and dynamic analysis of the protease–peptide complexes.
- Published
- 2020
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47. Identification of Bithionol, Dichlorophen, and Miconazole as Antibacterial Agents against Acinetobacter calcoaceticus
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Tiffany H. Khaw, S.N. Michael Wong, Genevieve Herle, Jean Patrick Gonzalez Dahua, Adhitya Logan, Saleem Alameh, Mikhail Martchenko Shilman, and Anastasia Levitin
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Chemistry ,QD1-999 - Published
- 2020
- Full Text
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48. Investigation of G-network with bypasses of queueing systems by positive customers at a non-stationary regime
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Victor Naumenko, Dmitry Kopats, Mikhail Matalytski, and Andrey Pankov
- Subjects
Applied mathematics. Quantitative methods ,T57-57.97 - Published
- 2020
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49. Repurposing Clinically Approved Drugs for the Treatment of Bacillus cereus, a Surrogate for Bacillus anthracis
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Masami Amakawa, Soneli Gunawardana, Alexy Jabbour, Alan Hernandez, Chase Pasos, Saleem Alameh, Mikhail Martchenko Shilman, and Anastasia Levitin
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Chemistry ,QD1-999 - Published
- 2020
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50. Identification of glucocorticoid receptor in Drosophila melanogaster
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Gloria Bartolo, Leandra O. Gonzalez, Saleem Alameh, C. Alexander Valencia, and Mikhail Martchenko Shilman
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Glucocorticoid receptor ,Drosophila melanogaster ,Fruit fly ,Estrogen receptor ,Cortisol ,Cortisone ,Microbiology ,QR1-502 - Abstract
Abstract Background Vertebrate glucocorticoid receptor (GR) is an evolutionary-conserved cortisol-regulated nuclear receptor that controls key metabolic and developmental pathways. Upon binding to cortisol, GR acts as an immunosuppressive transcription factor. Drosophila melanogaster, a model organism to study innate immunity, can also be immunosuppressed by glucocorticoids. However, while the genome of fruit fly harbors 18 nuclear receptor genes, the functional homolog of vertebrate GR has not been identified. Results In this study, we demonstrated that while D. melanogaster is susceptible to Saccharomyces cerevisiae oral infection, the oral exposure to cortisol analogs, cortisone acetate or estrogen, increases fly sensitivity to yeast challenge. To understand the mechanism of this steroid-induced immunosuppression, we identified the closest genetic GR homolog as D. melanogaster Estrogen Related Receptor (ERR) gene. We discovered that Drosophila ERR is necessary for cortisone acetate- and estrogen-mediated increase in sensitivity to fungal infection: while ERR mutant flies are as sensitive to the fungal challenge as the wildtype flies, the yeast-sensitivity of ERR mutants is not increased by these steroids. Interestingly, the fungal cortisone analog, ergosterol, did not increase the susceptibility of Drosophila to yeast infection. The immunosuppressive effect of steroids on the sensitivity of flies to fungi is evolutionary conserved in insects, as we show that estrogen significantly increases the yeast-sensitivity of Culex quinquefasciatus mosquitoes, whose genome contains a close ortholog of the fly ERR gene. Conclusions This study identifies a D. melanogaster gene that structurally resembles vertebrate GR and is functionally necessary for the steroid-mediated immunosuppression to fungal infections.
- Published
- 2020
- Full Text
- View/download PDF
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