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Soil life revolves around microorganisms that are crucial for soil ecosystems and health. In megacities, the combined exposure of multiple pollutants exerts a significant impact on the structures and functions of soil microorganisms; however, there is a lack of empirical studies on this topic. Hence, we conducted a study including urban parks in Beijing, China. The results indicate that bacteria were abundant in the soils of Beijing parks, showing the same dominant groups but different rare groups. The dominant groups included Actinobacteria and Proteobacteria. Candidate phyla radiation bacteria, a large evolutionary radiation of bacterial lineages whose members remain mostly uncultivated, were the main specialists. Under the combined exposure of multiple pollutants, the structures of soil microbial communities in different parks were similar. Community change due to pollutants (31%) was greater than that due to natural factors (2.4%). Among multipollutants, organophosphate esters, led by dibutyl phosphate, had the highest influence on microbial abundance and distribution. An increase in dibutyl phosphate concentration decreased the abundance of Firmicutes, while the abundance of Synergistota was increased. The interactions among pollutants affecting the bacteria were different. Bis(2-chloroethyl) phosphate, nickel and benzo[g,h,i]perylene influenced microorganisms by working with organophosphate esters. High-molecular-weight polycyclic aromatic hydrocarbons, such as benzo[a]pyrene and benzo[g,h,i]perylene, mainly acted on the functional genes and thus affected multiple biogeochemical cycles. Benzo[a]anthracene, bis(2-chloroethyl) phosphate, and arsenic were the primary pollutants affecting metabolic pathways. Our research helps to better understand the impacts of urban environmental pollution on soil microorganisms.