123 results on '"Michael D. Bartberger"'
Search Results
2. Systematic Study of the Glutathione Reactivity of N-Phenylacrylamides: 2. Effects of Acrylamide Substitution
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Adam Birkholz, David J. Kopecky, Laurie P. Volak, Michael D. Bartberger, Yuping Chen, Christopher M. Tegley, Tara Arvedson, John D. McCarter, Christopher Fotsch, and Victor J. Cee
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Drug Discovery ,Molecular Medicine - Published
- 2020
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3. Enantioselective synthesis of highly oxygenated acyclic quaternary center-containing building blocks via palladium-catalyzed decarboxylative allylic alkylation of cyclic siloxyketones†
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Toshihiko Iwayama, Aurapat Ngamnithiporn, Michael D. Bartberger, and Brian M. Stoltz
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chemistry.chemical_classification ,Enantioselective synthesis ,chemistry.chemical_element ,General Chemistry ,Combinatorial chemistry ,Catalysis ,Stereocenter ,Tsuji–Trost reaction ,Chemistry ,chemistry ,Yield (chemistry) ,Reactivity (chemistry) ,Lactone ,Palladium - Abstract
The development of a palladium-catalyzed enantioselective decarboxylative allylic alkylation of cyclic siloxyketones to produce enantioenriched silicon-tethered heterocycles is reported. The reaction proceeds smoothly to provide products bearing a quaternary stereocenter in excellent yields (up to 91% yield) with high levels of enantioselectivity (up to 94% ee). We further utilized the unique reactivity of the siloxy functionality to access chiral, highly oxygenated acyclic quaternary building blocks. In addition, we subsequently demonstrated the utility of these compounds through the synthesis of a lactone bearing vicinal quaternary-trisubstituted stereocenters., The development of a palladium-catalyzed enantioselective decarboxylative allylic alkylation of cyclic siloxyketones to produce enantioenriched silicon-tethered heterocycles is reported.
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- 2020
4. Ir-Catalyzed Asymmetric Allylic Alkylation of Dialkyl Malonates Enabling the Construction of Enantioenriched All-Carbon Quaternary Centers
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Farbod A. Moghadam, Elliot F. Hicks, Zachary P. Sercel, Alexander Q. Cusumano, Michael D. Bartberger, and Brian M. Stoltz
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Allyl Compounds ,Colloid and Surface Chemistry ,Alkylation ,Stereoisomerism ,General Chemistry ,Biochemistry ,Article ,Carbon ,Catalysis ,Malonates - Abstract
An enantioselective iridium-catalyzed allylic alkylation of malonates with trisubstituted allylic electrophiles to form all-carbon quaternary stereocenters is reported. This reaction proceeds at ambient temperature and enables the preparation of a wide range of enantioenriched products in up to 93% yield and 97% ee. The quaternary products can be readily converted to several valuable building blocks such as vicinal quaternary products and β-quaternary acids.
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- 2022
5. Iridium-catalyzed asymmetric trans-selective hydrogenation of 1,3-disubstituted isoquinolines
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Alexia N. Kim, Aurapat Ngamnithiporn, Michael D. Bartberger, and Brian M. Stoltz
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General Chemistry - Abstract
The development of the first asymmetric trans-selective hydrogenation of 1,3-disubstituted isoquinolines is reported. Utilizing [Ir(cod)Cl]₂ and a commercially available chiral Josiphos ligand, a variety of differentially substituted isoquinolines are hydrogenated to produce enantioenriched trans-tetrahydroisoquinolines in good yield with high levels of enantioselectivity. Directing group studies demonstrate that the hydroxymethyl functionality at the C1 position is critical for hydrogenation to favor the trans-diastereomer. Preliminary mechanistic studies reveal that non-coordinating chlorinated solvents and halide additives are crucial to enable trans-selectivity.
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- 2022
6. Abstract 6258: The discovery and preclinical characterization of the potent covalent KRASG12C inhibitor UCT-001024
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Tristin E. Rose, Brendan M. O'Boyle, Justin A. Hilf, Emma L. Baker-Tripp, Zhengao Feng, Kevin Yang, Michael D. Bartberger, Oliver C. Losón, Neil A. O'Brien, Martina S. McDermott, Naeimeh Kamranpour, Weiping Jia, Tong Luo, Raul Ayala, John Glasby, Brian M. Stoltz, and Dennis J. Slamon
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Cancer Research ,Oncology - Abstract
Small molecule inhibitors of KRASG12C have garnered substantial interest as a targeted therapy for lung, colon and pancreatic cancers bearing this mutation. Data from multiple clinical programs have shown strong efficacy in lung tumors but diminished and differential efficacy for other tumor sites including lung-derived brain metastases. We undertook a series of in vitro and in vivo studies to evaluate clinically staged KRASG12C inhibitors in an effort to elucidate pharmacological factors underlying these clinical differences and identified potency, permeability/efflux, and clearance as impediments to efficacy, particularly in the context of brain metastases. Adagrasib is reportedly efficacious in patients with brain metastases. Our preclinical experimentation suggests that distinguished potency and pharmacokinetics are critical to therapeutic benefit, particularly in the context of brain metastases. Using both structure- and ligand-based design approaches, we identified a development candidate UCT-001024, which is a covalent KRASG12C inhibitor that demonstrates superior target-engagement kinetics and cellular potency in vitro. UCT-001024 also demonstrates improved plasma and whole brain unbound clearance, and in vivo potency in ectopic xenograft models and a brain-tropic NSCLC metastasis model relative to adagrasib. Additionally, UCT-001024 shows a favorable DDI profile and ion channel safety in an in vitro iPSC-derived cardiomyocyte cardiac proarrhythmia assay. Citation Format: Tristin E. Rose, Brendan M. O'Boyle, Justin A. Hilf, Emma L. Baker-Tripp, Zhengao Feng, Kevin Yang, Michael D. Bartberger, Oliver C. Losón, Neil A. O'Brien, Martina S. McDermott, Naeimeh Kamranpour, Weiping Jia, Tong Luo, Raul Ayala, John Glasby, Brian M. Stoltz, Dennis J. Slamon. The discovery and preclinical characterization of the potent covalent KRASG12C inhibitor UCT-001024 [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2023; Part 1 (Regular and Invited Abstracts); 2023 Apr 14-19; Orlando, FL. Philadelphia (PA): AACR; Cancer Res 2023;83(7_Suppl):Abstract nr 6258.
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- 2023
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7. Iridium-catalyzed asymmetric
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Alexia N, Kim, Aurapat, Ngamnithiporn, Michael D, Bartberger, and Brian M, Stoltz
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The development of the first asymmetric
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- 2021
8. Discovery of a Covalent Inhibitor of KRASG12C (AMG 510) for the Treatment of Solid Tumors
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Brian A. Lanman, Jennifer R. Allen, John G. Allen, Albert K. Amegadzie, Kate S. Ashton, Shon K. Booker, Jian Jeffrey Chen, Ning Chen, Michael J. Frohn, Guy Goodman, David J. Kopecky, Longbin Liu, Patricia Lopez, Jonathan D. Low, Vu Ma, Ana E. Minatti, Thomas T. Nguyen, Nobuko Nishimura, Alexander J. Pickrell, Anthony B. Reed, Youngsook Shin, Aaron C. Siegmund, Nuria A. Tamayo, Christopher M. Tegley, Mary C. Walton, Hui-Ling Wang, Ryan P. Wurz, May Xue, Kevin C. Yang, Pragathi Achanta, Michael D. Bartberger, Jude Canon, L. Steven Hollis, John D. McCarter, Christopher Mohr, Karen Rex, Anne Y. Saiki, Tisha San Miguel, Laurie P. Volak, Kevin H. Wang, Douglas A. Whittington, Stephan G. Zech, J. Russell Lipford, and Victor J. Cee
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Drug Discovery ,Molecular Medicine - Published
- 2019
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9. Enantioselective total synthesis of (-)-myrifabral A and B
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Anthony Chen, Michael D. Bartberger, Brian M. Stoltz, and Tyler J. Fulton
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Cyclohexane ,010405 organic chemistry ,Chemistry ,Lactol ,Enantioselective synthesis ,Iminium ,Total synthesis ,General Chemistry ,010402 general chemistry ,Metathesis ,01 natural sciences ,Medicinal chemistry ,0104 chemical sciences ,Catalysis ,Tsuji–Trost reaction ,chemistry.chemical_compound - Abstract
A catalytic enantioselective approach to the Myrioneuron alkaloids (−)-myrifabral A and (−)-myrifabral B is described. The synthesis was enabled by a palladium-catalyzed enantioselective allylic alkylation, that generates the C(10) all-carbon quaternary center. A key N-acyl iminium ion cyclization forged the cyclohexane fused tricyclic core, while vinyl boronate cross metathesis and oxidation afforded the lactol ring of (−)-myrifabral A. Adaptation of previously reported conditions allowed for the conversion of (−)-myrifabral A to (−)-myrifabral B., A catalytic enantioselective approach to the Myrioneuron alkaloids (−)-myrifabral A and (−)-myrifabral B is described.
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- 2021
10. Enantioselective Total Synthesis of (–)-Myrifabral A and B
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Michael D. Bartberger, Anthony Chen, Brian M. Stoltz, and Tyler J. Fulton
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chemistry.chemical_compound ,Tsuji–Trost reaction ,chemistry ,Cyclohexane ,Lactol ,Enantioselective synthesis ,Total synthesis ,Iminium ,Ring (chemistry) ,Metathesis ,Medicinal chemistry - Abstract
A catalytic enantioselective approach to the myrioneuron alkaloids (–)-myrifabral A and (–)-myrifabral B is described. The synthesis was enabled by a palladium-catalyzed enantioselective allylic alkylation, that generates the C(10) all-carbon quaternary center. A key N-acyl iminium ion cyclization forged the cyclohexane fused tricyclic core, while vinyl boronate cross metathesis and oxidation afforded the lactol ring of (–)-myrifabral A. Adaptation of previously reported conditions allowed for the conversion of (–)-myrifabral A to (–)-myrifabral B.
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- 2020
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11. Iridium-Catalyzed Enantioselective and Diastereoselective Hydrogenation of 1,3-Disubstituted Isoquinolines
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Scott C. Virgil, Alexia N. Kim, Michael D. Bartberger, Christian U. Grünanger, Brian M. Stoltz, Aurapat Ngamnithiporn, Martin T. Daiger, and Eric R. Welin
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General method ,010405 organic chemistry ,Asymmetric hydrogenation ,Enantioselective synthesis ,chemistry.chemical_element ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Combinatorial chemistry ,Catalysis ,Article ,0104 chemical sciences ,chemistry.chemical_compound ,chemistry ,Hydroxymethyl ,Iridium - Abstract
The development of a general method utilizing a hydroxymethyl directing group for asymmetric hydrogenation of 1,3-disubstituted isoquinolines to provide chiral 1,2,3,4-tetrahydroisoquinolines is reported. The reaction, which utilizes [Ir(cod)Cl]₂ and a commercially available chiral xyliphos ligand, proceeds in good yield with high levels of enantioselectivity and diastereoselectivity (up to 95% ee and >20:1 dr) on a range of differentially substituted isoquinolines. Directing-group studies demonstrate that the hydroxymethyl functional group at the C1 position is more efficient at enabling hydrogenation in comparison to other substituents, although high levels of enantioselectivity were conserved across a variety of polar and nonpolar functional groups. By utilization of the generated chiral β-amino alcohol as a functional handle, the synthetic utility is further highlighted via the synthesis of 1,2-fused oxazolidine, oxazolidinone, and morpholinone tetrahydroisoquinolines in one step. Additionally, a non-natural analogue of the tetrahydroprotoberberine alkaloids was successfully synthesized.
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- 2020
12. Mechanistic Insights into the Racemization of Fused Cyclopropyl Isoxazolines
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Seb Caille, John T. Colyer, Stephen Osgood, Kevin Crossley, Michael D. Bartberger, Kyle Quasdorf, and Adam B Birkholz
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Quantitative Biology::Biomolecules ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,Quantitative Biology::Quantitative Methods ,Enantiopure drug ,Computational chemistry ,Mechanism (philosophy) ,Physical and Theoretical Chemistry ,Racemization - Abstract
Experimental and computational studies of the unexpected racemization of enantiopure fused cyclopropyl isoxazolines are reported. These studies offer insights into the mechanism of racemization, quantify the position of the transition state on the dipolar-diradical continuum, and establish a relationship between the structure and stability of this class of compounds. Experimental and computed energy barriers for racemization are also presented.
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- 2019
13. Discovery of AM-6494: A Potent and Orally Efficacious β-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitor with in Vivo Selectivity over BACE2
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Paul H. Wen, Stephen J. Wood, Qingyian Liu, Aaron C. Siegmund, Liping H. Pettus, Adrian Nanez, Matthew P. Bourbeau, Jennifer R. Allen, Michael D. Bartberger, Douglas A. Whittington, Jodi Bradley, James R. Manning, Kui Chen, Dean Hickman, and Michael E. Johnson
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Cyclopropanes ,Male ,Models, Molecular ,Thiazines ,Pharmacology ,01 natural sciences ,Rats, Sprague-Dawley ,03 medical and health sciences ,Mice ,In vivo ,Alzheimer Disease ,mental disorders ,Drug Discovery ,Amyloid precursor protein ,medicine ,Animals ,Aspartic Acid Endopeptidases ,Humans ,Enzyme Inhibitors ,IC50 ,030304 developmental biology ,Hypopigmentation ,Melanosome ,chemistry.chemical_classification ,0303 health sciences ,Amyloid beta-Peptides ,biology ,Chemistry ,Brain ,Peptide Fragments ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,Enzyme ,Pharmacodynamics ,biology.protein ,Molecular Medicine ,medicine.symptom ,Amyloid Precursor Protein Secretases ,Selectivity - Abstract
β-Site amyloid precursor protein cleaving enzyme 1 (BACE1) is an aspartyl protease that plays a key role in the production of amyloid β (Aβ) in the brain and has been extensively pursued as a target for the treatment of Alzheimer's disease (AD). BACE2, an aspartyl protease that is structurally related to BACE1, has been recently reported to be involved in melanosome maturation and pigmentation. Herein, we describe the development of a series of cyclopropylthiazines as potent and orally efficacious BACE1 inhibitors. Lead optimization led to the identification of 20, a molecule with biochemical IC50 BACE2/BACE1 ratio of 47. Administration of 20 resulted in no skin/fur color change in a 13-day mouse hypopigmentation study and demonstrated robust and sustained reduction of CSF and brain Aβ40 levels in rat and monkey pharmacodynamic models. On the basis of a compelling data package, 20 (AM-6494) was advanced to preclinical development.
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- 2019
14. Incorporation of a chiral gem-disubstituted nitrogen heterocycle yields an oxazolidinone antibiotic with reduced mitochondrial toxicity
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O'boyle Brendan M, Peter Jorth, Philip L. Bulterys, Michael D. Bartberger, Alexander W. Sun, Scott C. Virgil, Brian M. Stoltz, and Jeff F. Miller
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endocrine system diseases ,medicine.drug_class ,Clinical Biochemistry ,Antibiotics ,Pharmaceutical Science ,Mitochondrion ,01 natural sciences ,Biochemistry ,Article ,Mitochondrial Proteins ,chemistry.chemical_compound ,Structure-Activity Relationship ,Heterocyclic Compounds ,Morpholine ,Drug Discovery ,medicine ,Humans ,Molecular Biology ,biology ,Dose-Response Relationship, Drug ,Molecular Structure ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Linezolid ,medicine.disease ,biology.organism_classification ,Combinatorial chemistry ,Small molecule ,In vitro ,0104 chemical sciences ,Anti-Bacterial Agents ,Mitochondria ,010404 medicinal & biomolecular chemistry ,Mitochondrial toxicity ,Molecular Medicine ,Bacteria - Abstract
gem-Disubstituted N-heterocycles are rarely found in drugs, despite their potential to improve the drug-like properties of small molecule pharmaceuticals. Linezolid, a morpholine heterocycle-containing oxazolidinone antibiotic, exhibits significant side effects associated with human mitochondrial protein synthesis inhibition. We synthesized a gem-disubstituted linezolid analogue that when compared to linezolid, maintains comparable (albeit slightly diminished) activity against bacteria, comparable in vitro physicochemical properties, and a decrease in undesired mitochondrial protein synthesis (MPS) inhibition. This research contributes to the structure-activity-relationship data surrounding oxazolidinone MPS inhibition, and may inspire investigations into the utility of gem-disubstituted N-heterocycles in medicinal chemistry.
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- 2019
15. Development of 2-aminooxazoline 3-azaxanthene β-amyloid cleaving enzyme (BACE) inhibitors with improved selectivity against Cathepsin D
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Michael D. Bartberger, Vijay Keshav Gore, Mark R. Fielden, Ryan White, Qingyian Liu, E. Allen Sickmier, Stephen J. Wood, Jonathan D. Low, Jonathan Werner, Yuan Cheng, Dean Hickman, Hugo M. Vargas, Douglas A. Whittington, Ana Elena Minatti, and Kui Chen
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0301 basic medicine ,Pharmaceutical Science ,Cathepsin D ,Pharmacology ,Biology ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,β amyloid ,mental disorders ,Drug Discovery ,Hydrolase ,chemistry.chemical_classification ,Cardiovascular safety ,Organic Chemistry ,Retinal ,stomatognathic diseases ,Chemistry ,030104 developmental biology ,Retinal toxicity ,Enzyme ,chemistry ,Molecular Medicine ,Selectivity - Abstract
As part of an ongoing effort at Amgen to develop a disease-modifying therapy for Alzheimer's disease, we have previously used the aminooxazoline xanthene (AOX) scaffold to generate potent and orally efficacious BACE1 inhibitors. While AOX-BACE1 inhibitors demonstrated acceptable cardiovascular safety margins, a retinal pathological finding in rat toxicological studies demanded further investigation. It has been widely postulated that such retinal toxicity might be related to off-target inhibition of Cathepsin D (CatD), a closely related aspartyl protease. We report the development of AOX-BACE1 inhibitors with improved selectivity against CatD by following a structure- and property-based approach. Our efforts culminated in the discovery of a picolinamide-substituted 3-aza-AOX-BACE1 inhibitor absent of retinal effects in an early screening rat toxicology study.
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- 2017
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16. Enantioselective Pd-Catalyzed Decarboxylative Allylic Alkylation of Thiopyranones. Access to Acyclic, Stereogenic α-Quaternary Ketones
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Scott C. Virgil, Michael D. Bartberger, Eric J. Alexy, and Brian M. Stoltz
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Alkylation ,Molecular Structure ,010405 organic chemistry ,Organic Chemistry ,Enantioselective synthesis ,chemistry.chemical_element ,Stereoisomerism ,Ketones ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Catalysis ,Article ,0104 chemical sciences ,Stereocenter ,Tsuji–Trost reaction ,chemistry ,Organic chemistry ,Physical and Theoretical Chemistry ,Enantiomeric excess ,Palladium - Abstract
A catalytic, enantioselective decarboxylative allylic alkylation of 4-thiopyranones is reported. The α-quaternary 4-thiopyranones produced are challenging to access by standard enolate alkylation owing to facile ring-opening β-sulfur elimination. In addition, reduction of the carbon–sulfur bonds provides access to elusive acyclic α-quaternary ketones. The alkylated products are obtained in up to 92% yield and 94% enantiomeric excess.
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- 2017
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17. The development of a structurally distinct series of BACE1 inhibitors via the (Z)-fluoro-olefin amide bioisosteric replacement
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Wenyuan Qian, Michael J. Frohn, Michael D. Bartberger, Stephen J. Wood, Albert Amegadzie, Aaron C. Siegmund, Ning Chen, Jennifer R. Allen, Dean Hickman, Helming Tan, Paul H. Wen, Longbin Liu, Matthew P. Bourbeau, and Douglas A. Whittington
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Hydrocarbons, Fluorinated ,Clinical Biochemistry ,Molecular Conformation ,Pharmaceutical Science ,Alkenes ,01 natural sciences ,Biochemistry ,Structure-Activity Relationship ,chemistry.chemical_compound ,Drug Development ,Amide ,Drug Discovery ,Aspartic Acid Endopeptidases ,Humans ,Structure–activity relationship ,Enzyme Inhibitors ,Molecular Biology ,ADME ,Olefin fiber ,Dose-Response Relationship, Drug ,010405 organic chemistry ,Organic Chemistry ,Stereoisomerism ,Amides ,Combinatorial chemistry ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,HEK293 Cells ,chemistry ,Molecular Medicine ,Bioisostere ,Amyloid Precursor Protein Secretases - Abstract
The (Z)-fluoro-olefin amide bioisosteric replacement is an effective tool for addressing various shortcomings of the parent amide. In an effort to fine tune ADME properties of BACE1 preclinical candidate AM-6494, a series of structurally distinct (Z)-fluoro-olefin containing analogs was developed that culminated in compound 15. Herein, we detail design considerations, synthetic challenges, structure activity relationship (SAR) studies, and in vivo properties of an advanced compound in this novel series of BACE1 inhibitors.
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- 2020
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18. Discovery of TRPM8 Antagonist ( S)-6-(((3-Fluoro-4-(trifluoromethoxy)phenyl)(3-fluoropyridin-2-yl)methyl)carbamoyl)nicotinic Acid (AMG 333), a Clinical Candidate for the Treatment of Migraine
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Jeffrey Clarine, Qingyian Liu, Beth D. Youngblood, Chester Chenguang Yuan, Michelle Horner, James Brown, Jian J. Chen, Michael D. Bartberger, Vu Van Ma, Matthew R. Kaller, Carl D. Davis, Maosheng Zhang, Thomas T. Nguyen, Narender R. Gavva, Scott Harried, Sonya G. Lehto, Jennifer R. Allen, Holger Monenschein, Daniel B. Horne, Vijay Keshav Gore, Wenge Zhong, and Kaustav Biswas
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0301 basic medicine ,Male ,Models, Molecular ,Migraine Disorders ,TRPM Cation Channels ,Pyrimidinones ,Pharmacology ,Niacin ,Pathogenesis ,Rats, Sprague-Dawley ,03 medical and health sciences ,0302 clinical medicine ,Seizures ,Drug Discovery ,TRPM8 ,medicine ,Animals ,Humans ,Molecular Structure ,Drug discovery ,Chemistry ,Antagonist ,medicine.disease ,Rats ,Clinical trial ,Calcium Channel Agonists ,030104 developmental biology ,Nicotinic agonist ,medicine.anatomical_structure ,Migraine ,030220 oncology & carcinogenesis ,Peripheral nervous system ,Microsomes, Liver ,Molecular Medicine ,Anticonvulsants - Abstract
Transient-receptor-potential melastatin 8 (TRPM8), the predominant mammalian cold-temperature thermosensor, is a nonselective cation channel expressed in a subpopulation of sensory neurons in the peripheral nervous system, including nerve circuitry implicated in migraine pathogenesis: the trigeminal and pterygopalatine ganglia. Genomewide association studies have identified an association between TRPM8 and reduced risk of migraine. This disclosure focuses on medicinal-chemistry efforts to improve the druglike properties of initial leads, particularly removal of CYP3A4-induction liability and improvement of pharmacokinetic properties. A novel series of biarylmethanamide TRPM8 antagonists was developed, and a subset of leads were evaluated in preclinical toxicology studies to identify a clinical candidate with an acceptable preclinical safety profile leading to clinical candidate AMG 333, a potent and highly selective antagonist of TRPM8 that was evaluated in human clinical trials.
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- 2018
19. Discovery of the imidazole-derived GPR40 agonist AM-3189
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Jian Luo, Jinqian Liu, Jane Zhang, Jonathan B. Houze, Todd J. Kohn, Run Zhuang, Simon Wong, Michael D. Bartberger, Zhihua Ma, Daniel C.-H. Lin, Yingcai Wang, George Tonn, Jiwen Jim Liu, Frank Li, Liusheng Zhu, An-Rong Li, Julio C. Medina, and Rajiv Sharma
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0301 basic medicine ,Agonist ,medicine.drug_class ,Clinical Biochemistry ,Pharmaceutical Science ,Pharmacology ,Biochemistry ,Receptors, G-Protein-Coupled ,Mice ,Structure-Activity Relationship ,03 medical and health sciences ,chemistry.chemical_compound ,Dogs ,Pharmacokinetics ,In vivo ,Free fatty acid receptor 1 ,Drug Discovery ,medicine ,Animals ,Humans ,Imidazole ,Structure–activity relationship ,Molecular Biology ,G protein-coupled receptor ,Dose-Response Relationship, Drug ,Molecular Structure ,Chemistry ,Drug discovery ,Organic Chemistry ,Imidazoles ,Rats ,Macaca fascicularis ,030104 developmental biology ,Molecular Medicine - Abstract
As a follow-up to the GPR40 agonist AMG 837, which was evaluated in clinical trials for the treatment of type II diabetes, further optimization led to the discovery of AM-3189 (13k). AM-3189 is representative of a new class of compounds with minimal CNS penetration, superior pharmacokinetic properties and in vivo efficacy comparable to AMG 837.
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- 2016
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20. Discovery and Structure-Guided Optimization of Diarylmethanesulfonamide Disrupters of Glucokinase–Glucokinase Regulatory Protein (GK–GKRP) Binding: Strategic Use of a N → S (nN → σ*S–X) Interaction for Conformational Constraint
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Michael D. Bartberger, Michael Croghan, Carolyn Moyer, David Lloyd, Rod Cupples, Seifu Tadesse, Nobuko Nishimura, Ke Kong, Gwyneth Van, Christopher H. Fotsch, Randall W. Hungate, David J. St. Jean, Kevin Yang, Kate Ashton, Mark H. Norman, Samer Chmait, Longbin Liu, Lewis D. Pennington, Fang-Tsao Hong, Matthew P. Bourbeau, Clarence Hale, Jiandong Zhang, Aaron C. Siegmund, Jie Chen, Christopher M. Tegley, Steven R. Jordan, Kristin L. Andrews, Klaus Michelsen, Guomin Yao, Glenn Sivits, Andreas Reichelt, and Joan Helmering
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Blood Glucose ,Male ,Models, Molecular ,Cytoplasm ,Stereochemistry ,Active Transport, Cell Nucleus ,Molecular Conformation ,Stereoisomerism ,Thiophenes ,Plasma protein binding ,Crystallography, X-Ray ,Rats, Sprague-Dawley ,Mice ,Structure-Activity Relationship ,chemistry.chemical_compound ,Glucokinase ,Drug Discovery ,medicine ,Animals ,Hypoglycemic Agents ,Structure–activity relationship ,Lone pair ,Adaptor Proteins, Signal Transducing ,Cell Nucleus ,Sulfonamides ,Glucokinase regulatory protein ,biology ,Chemistry ,medicine.anatomical_structure ,Microsomes, Liver ,biology.protein ,Molecular Medicine ,Nucleus ,Lead compound ,Protein Binding - Abstract
The HTS-based discovery and structure-guided optimization of a novel series of GKRP-selective GK-GKRP disrupters are revealed. Diarylmethanesulfonamide hit 6 (hGK-hGKRP IC50 = 1.2 μM) was optimized to lead compound 32 (AMG-0696; hGK-hGKRP IC50 = 0.0038 μM). A stabilizing interaction between a nitrogen atom lone pair and an aromatic sulfur system (nN → σ*S-X) in 32 was exploited to conformationally constrain a biaryl linkage and allow contact with key residues in GKRP. Lead compound 32 was shown to induce GK translocation from the nucleus to the cytoplasm in rats (IHC score = 0; 10 mg/kg po, 6 h) and blood glucose reduction in mice (POC = -45%; 100 mg/kg po, 3 h). X-ray analyses of 32 and several precursors bound to GKRP were also obtained. This novel disrupter of GK-GKRP binding enables further exploration of GKRP as a potential therapeutic target for type II diabetes and highlights the value of exploiting unconventional nonbonded interactions in drug design.
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- 2015
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21. Small Molecule Disruptors of the Glucokinase–Glucokinase Regulatory Protein Interaction: 5. A Novel Aryl Sulfone Series, Optimization Through Conformational Analysis
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Kevin Yang, Rod Cupples, Gwyneth Van, Nobuko Nishimura, Longbin Liu, David J. St. Jean, Clarence Hale, Glenn Sivits, Jie Chen, Nuria A. Tamayo, Steven R. Jordan, Fang-Tsao Hong, Mark H. Norman, Michael D. Bartberger, Yunxin Bo, Christopher H. Fotsch, Samer Chmait, Seifu Tadesse, and David Lloyd
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Models, Molecular ,Stereochemistry ,Molecular Conformation ,Aminopyridines ,Crystallography, X-Ray ,Sulfone ,Rats, Sprague-Dawley ,Small Molecule Libraries ,Structure-Activity Relationship ,chemistry.chemical_compound ,Glucokinase ,Drug Discovery ,Animals ,Hypoglycemic Agents ,Structure–activity relationship ,Glucose homeostasis ,Sulfones ,Thiazole ,Molecular Structure ,Glucokinase regulatory protein ,biology ,Aryl ,Small molecule ,Rats ,Glucose ,Liver ,chemistry ,Biochemistry ,biology.protein ,Molecular Medicine ,Carrier Proteins - Abstract
The glucokinase-glucokinase regulatory protein (GK-GKRP) complex plays an important role in controlling glucose homeostasis in the liver. We have recently disclosed a series of arylpiperazines as in vitro and in vivo disruptors of the GK-GKRP complex with efficacy in rodent models of type 2 diabetes mellitus (T2DM). Herein, we describe a new class of aryl sulfones as disruptors of the GK-GKRP complex, where the central piperazine scaffold has been replaced by an aromatic group. Conformational analysis and exploration of the structure-activity relationships of this new class of compounds led to the identification of potent GK-GKRP disruptors. Further optimization of this novel series delivered thiazole sulfone 93, which was able to disrupt the GK-GKRP interaction in vitro and in vivo and, by doing so, increases cytoplasmic levels of unbound GK.
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- 2015
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22. A Survey of the Role of Noncovalent Sulfur Interactions in Drug Design
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Kap-Sun Yeung, Nicholas A. Meanwell, Brett R. Beno, Lewis D. Pennington, and Michael D. Bartberger
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Models, Molecular ,Hydrogen bond ,Stereochemistry ,Intermolecular force ,Sulfur metabolism ,Proteins ,chemistry.chemical_element ,Hydrogen Bonding ,Sulfur ,chemistry.chemical_compound ,Atomic orbital ,chemistry ,Chemical physics ,Drug Design ,Intramolecular force ,Drug Discovery ,Humans ,Molecular Medicine ,Molecule ,Organic synthesis - Abstract
Electron deficient, bivalent sulfur atoms have two areas of positive electrostatic potential, a consequence of the low-lying σ* orbitals of the C-S bond that are available for interaction with electron donors including oxygen and nitrogen atoms and, possibly, π-systems. Intramolecular interactions are by far the most common manifestation of this effect, which offers a means of modulating the conformational preferences of a molecule. Although a well-documented phenomenon, a priori applications in drug design are relatively sparse and this interaction, which is often isosteric with an intramolecular hydrogen-bonding interaction, appears to be underappreciated by the medicinal chemistry community. In this Perspective, we discuss the theoretical basis for sulfur σ* orbital interactions and illustrate their importance in the context of drug design and organic synthesis. The role of sulfur interactions in protein structure and function is discussed and although relatively rare, intermolecular interactions between ligand C-S σ* orbitals and proteins are illustrated.
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- 2015
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23. Correction to Fragment-Linking Approach Using
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John B, Jordan, Douglas A, Whittington, Michael D, Bartberger, E Allen, Sickmier, Kui, Chen, Ryan D, White, Yuan, Cheng, and Ted, Judd
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- 2017
24. Recent Advances in the Development of Acetyl-CoA Carboxylase (ACC) Inhibitors for the Treatment of Metabolic Disease
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Michael D. Bartberger and Matthew P. Bourbeau
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Drug ,Human disease ,Research groups ,Chemistry ,In vivo ,media_common.quotation_subject ,Drug Discovery ,Acetyl-CoA carboxylase ,Molecular Medicine ,Pharmacology ,Metabolic disease ,media_common ,Pyruvate carboxylase - Abstract
The development of acetyl-CoA carboxylase (ACC) inhibitors for the treatment of metabolic disease has been pursued by the pharmaceutical industry for some time. A number of recent disclosures describing potent ACC inhibitors have been reported by multiple research groups. Unlike many prior publications in this area, more recent publications contain a significant amount of in vivo efficacy data generated by long-term experiments in rodent models of metabolic disease. Additionally, one compound has been advanced to human clinical studies. The results from these studies should allow researchers to better gauge the potential utility of ACC inhibition for the treatment of human disease.
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- 2014
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25. Reductive Amination Without the Aldehyde: Use of a Ketolactol as an Aldehyde Surrogate
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Alan M. Allgeier, Denise Lyn Andersen, Pingli Liu, Michael D. Bartberger, Robert D. Larsen, Thomas Storz, Emilio E. Bunel, and Jason S. Tedrow
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chemistry.chemical_classification ,Mass transfer coefficient ,Lactol ,Continuous stirred-tank reactor ,Iminium ,General Chemistry ,Reductive amination ,Aldehyde ,Catalysis ,chemistry.chemical_compound ,chemistry ,Computational chemistry ,Organic chemistry ,Amine gas treating - Abstract
To overcome stability issues associated with the use of an aldehyde in a catalytic reductive amination reaction, a cyclic ketolactol (ω-hydroxylactone) was employed as an aldehyde surrogate to form a γ-aminoacid. The reaction proceeded most favorably over a Pt/C catalyst. The thermodynamics of each step were evaluated using density functional theory calculations, which correctly predicted the dominance of the ring-closed lactol reactant, yet suggested a preference for a ring-opened iminium intermediate upon the initial, slightly endoergic addition of amine substrate. Exoergic hydrogenation of this intermediate provided the thermodynamic driving force for the overall transformation. During development, the reaction was observed to depend significantly on the volumetric gas to liquid mass transfer coefficient (kLa) and this parameter was optimized to ensure successful scale up in a 400 L stirred tank reactor.
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- 2014
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26. Discovery of Potent and Simplified Piperidinone-Based Inhibitors of the MDM2–p53 Interaction
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Jiang Zhu, Tao Osgood, Xin Huang, Anne Y. Saiki, John Eksterowicz, Jiwen Jim Liu, Yosup Rew, Xiaoning Zhao, Qiuping Ye, Steven H. Olson, Julio C. Medina, Michael W. Gribble, David Chow, Jiasheng Fu, Ming Yu, Zhihong Li, Daqing Sun, Jude Canon, Dustin McMinn, Paul L. Shaffer, Xuelei Yan, Yingcai Wang, Brian M. Fox, Mei-Chu Lo, Jonathan D. Oliner, Dongyin Yu, Ada Chen, Michael D. Bartberger, and Jing Zhou
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Antitumor activity ,chemistry.chemical_compound ,Pharmacokinetics ,Chemistry ,Stereochemistry ,In vivo ,Organic Chemistry ,Drug Discovery ,Substituent ,Mdm2 p53 ,Biochemistry ,Combinatorial chemistry - Abstract
Continued optimization of the N-substituent in the piperidinone series provided potent piperidinone-pyridine inhibitors 6, 7, 14, and 15 with improved pharmacokinetic properties in rats. Reducing structure complexity of the N-alkyl substituent led to the discovery of 23, a potent and simplified inhibitor of MDM2. Compound 23 exhibits excellent pharmacokinetic properties and substantial in vivo antitumor activity in the SJSA-1 osteosarcoma xenograft mouse model.
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- 2014
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27. Synthesis and structure–activity relationship of trisubstituted thiazoles as Cdc7 kinase inhibitors
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Kathleen S. Keegan, Hong Shu, Michael D. Bartberger, Julie M. Bailis, Guomin Yao, Jennifer Dao, Matthew R. Kaller, Andreas Reichelt, John G. Allen, and Margaret F. Weidner
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Male ,Cell Cycle Proteins ,Chemistry Techniques, Synthetic ,Protein Serine-Threonine Kinases ,Inhibitory Concentration 50 ,Mice ,Structure-Activity Relationship ,Catalytic Domain ,Cell Line, Tumor ,Drug Discovery ,Animals ,Humans ,Structure–activity relationship ,Viability assay ,Phosphorylation ,Kinase activity ,Protein kinase A ,Protein Kinase Inhibitors ,Pharmacology ,DNA synthesis ,Chemistry ,Kinase ,Organic Chemistry ,DNA replication ,Minichromosome Maintenance Complex Component 2 ,General Medicine ,HCT116 Cells ,Xenograft Model Antitumor Assays ,Rats ,Molecular Docking Simulation ,Thiazoles ,Biochemistry ,Cancer cell ,Female - Abstract
The Cell division cycle 7 (Cdc7) protein kinase is essential for DNA replication and maintenance of genome stability. We systematically explored thiazole-based compounds as inhibitors of Cdc7 kinase activity in cancer cells. Our studies resulted in the identification of a potent, selective Cdc7 inhibitor that decreased phosphorylation of the direct substrate MCM2 in vitro and in vivo, and inhibited DNA synthesis and cell viability in vitro.
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- 2014
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28. Selective and Potent Morpholinone Inhibitors of the MDM2–p53 Protein–Protein Interaction
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Ada Chen, Steven H. Olson, Alexander M. Long, John Eksterowicz, Michael D. Bartberger, Jing Zhou, Yosup Rew, Lawrence R. McGee, Mei-Chu Lo, Anne Y. Saiki, Dongyin Yu, Jason Duquette, Xuelei Yan, Ana Z. Gonzalez, Hilary Plake Beck, Jonathan B. Houze, Yun Ling, Mcintosh Joel, Jonathan D. Oliner, Sarah Wortman, Jude Canon, Daqing Sun, Dustin McMinn, Brian M. Fox, Paul L. Shaffer, Xiaoning Zhao, Tao Osgood, Lixia Jin, Xin Huang, Zhihong Li, David Chow, Qiuping Ye, Yihong Li, Jiasheng Fu, Peter Yakowec, and Julio C. Medina
- Subjects
Models, Molecular ,Stereochemistry ,Morpholines ,Molecular Conformation ,Antineoplastic Agents ,Acetates ,Crystallography, X-Ray ,Protein–protein interaction ,Mice ,Structure-Activity Relationship ,Cell Line, Tumor ,Drug Discovery ,Animals ,Humans ,Potency ,Structure–activity relationship ,Mdm2 p53 ,IC50 ,biology ,Chemistry ,Drug discovery ,Proto-Oncogene Proteins c-mdm2 ,Xenograft Model Antitumor Assays ,Rats ,Cell culture ,biology.protein ,Molecular Medicine ,Mdm2 ,Indicators and Reagents ,Tumor Suppressor Protein p53 - Abstract
We previously reported the discovery of AMG 232, a highly potent and selective piperidinone inhibitor of the MDM2-p53 interaction. Our continued search for potent and diverse analogues led to the discovery of novel morpholinone MDM2 inhibitors. This change to a morpholinone core has a significant impact on both potency and metabolic stability compared to the piperidinone series. Within this morpholinone series, AM-8735 emerged as an inhibitor with remarkable biochemical potency (HTRF IC50 = 0.4 nM) and cellular potency (SJSA-1 EdU IC50 = 25 nM), as well as pharmacokinetic properties. Compound 4 also shows excellent antitumor activity in the SJSA-1 osteosarcoma xenograft model with an ED50 of 41 mg/kg. Lead optimization toward the discovery of this inhibitor as well as key differences between the morpholinone and the piperidinone series will be described herein.
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- 2014
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29. Piperazine Oxadiazole Inhibitors of Acetyl-CoA Carboxylase
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James Meyer, Kevin Salyers, Minghan Wang, Matthew P. Bourbeau, Yang Xu, Melissa Graham, Christopher H. Fotsch, John G. Allen, Wei Gu, Michael D. Bartberger, Mark R. Fielden, Murielle M. Véniant, Ki-Won Kim, James Busby, Aaron C. Siegmund, Renee Komorowski, and Hong Shu
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Mice, Obese ,Oxadiazole ,Pharmacology ,Piperazines ,Mice ,Structure-Activity Relationship ,chemistry.chemical_compound ,Pharmacokinetics ,In vivo ,Drug Discovery ,Animals ,Humans ,Structure–activity relationship ,Enzyme Inhibitors ,Mice, Knockout ,Oxadiazoles ,Dose-Response Relationship, Drug ,Molecular Structure ,Chemistry ,Acetyl-CoA carboxylase ,Metabolism ,Diet ,Pyruvate carboxylase ,Mice, Inbred C57BL ,Piperazine ,Biochemistry ,Molecular Medicine ,Acetyl-CoA Carboxylase - Abstract
Acetyl-CoA carboxylase (ACC) is a target of interest for the treatment of metabolic syndrome. Starting from a biphenyloxadiazole screening hit, a series of piperazine oxadiazole ACC inhibitors was developed. Initial pharmacokinetic liabilities of the piperazine oxadiazoles were overcome by blocking predicted sites of metabolism, resulting in compounds with suitable properties for further in vivo studies. Compound 26 was shown to inhibit malonyl-CoA production in an in vivo pharmacodynamic assay and was advanced to a long-term efficacy study. Prolonged dosing with compound 26 resulted in impaired glucose tolerance in diet-induced obese (DIO) C57BL6 mice, an unexpected finding.
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- 2013
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30. Discovery of 2-methylpyridine-based biaryl amides as γ-secretase modulators for the treatment of Alzheimer’s disease
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Qingyian Liu, Kaustav Biswas, Frank Koegler, Tiffany L. Correll, Toni Williamson, Jodi Bradley, Jennifer R. Allen, Leeanne Zalameda, Darren L. Reid, Michael D. Bartberger, Joe Zhu, Stephen J. Wood, Randy Hungate, Yichin Liu, Frank Chavez, Robert M. Rzasa, Jianhua Zhang, John D. McCarter, Thomas Nixey, Paul H. Wen, Li Zhu, Shannon Rumfelt, Yi Luo, Safura Babu-Khan, Stephen Hitchcock, Ning Chen, Mqhele Ncube, Wenyuan Qian, Frenel Fils Demorin, Dean Hickman, Christopher M. Tegley, Jian J. Chen, Albert Amegadzie, Charles W. Dean, and Chester Chenguang Yuan
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Enzyme complex ,Clinical Biochemistry ,Cell ,Pharmaceutical Science ,Pharmacology ,Cleavage (embryo) ,Biochemistry ,Rats, Sprague-Dawley ,Cerebrospinal fluid ,Alzheimer Disease ,Oral administration ,Drug Discovery ,medicine ,Animals ,Humans ,Potency ,Molecular Biology ,Cell potency ,chemistry.chemical_classification ,Organic Chemistry ,Amides ,Rats ,HEK293 Cells ,Enzyme ,medicine.anatomical_structure ,chemistry ,Picolines ,Molecular Medicine ,Amyloid Precursor Protein Secretases - Abstract
γ-Secretase modulators (GSMs) are potentially disease-modifying treatments for Alzheimer's disease. They selectively lower pathogenic Aβ42 levels by shifting the enzyme cleavage sites without inhibiting γ-secretase activity, possibly avoiding known adverse effects observed with complete inhibition of the enzyme complex. A cell-based HTS effort identified the sulfonamide 1 as a GSM lead. Lead optimization studies identified compound 25 with improved cell potency, PKDM properties, and it lowered Aβ42 levels in the cerebrospinal fluid (CSF) of Sprague-Dawley rats following oral administration. Further optimization of 25 to improve cellular potency is described.
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- 2013
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31. Baseline resolution of isomers by traveling wave ion mobility mass spectrometry: investigating the effects of polarizable drift gases and ionic charge distribution
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Iain D. G. Campuzano, Gilberto F. de Sá, Gustavo H.M.F. Souza, Priscila M. Lalli, Yuri E. Corilo, Michael D. Bartberger, Michael McCullagh, Maria Francesca Riccio, Maíra Fasciotti, Romeu J. Daroda, and Marcos N. Eberlin
- Subjects
Chemistry ,Ion-mobility spectrometry ,Analytical chemistry ,Charge density ,Electronic structure ,Molecular physics ,Ion ,symbols.namesake ,Polarizability ,symbols ,Molecule ,Density functional theory ,van der Waals force ,Spectroscopy - Abstract
We have studied the behavior of isomers and analogues by traveling wave ion mobility mass spectrometry (TWIM-MS) using drift-gases with varying masses and polarizabilities. Despite the reduced length of the cell (18 cm), a pair of constitutional isomers, N-butylaniline and para-butylaniline, with theoretical collision cross-section values in helium (ΩHe) differing by as little as 1.2 A2 (1.5%) but possessing contrasting charge distribution, showed baseline peak-to-peak resolution (Rp-p) for their protonated molecules, using carbon dioxide (CO2), nitrous oxide (N2O) and ethene (C2H4) as the TWIM drift-gas. Near baseline Rp-p was also obtained in CO2 for a group of protonated haloanilines (para-chloroaniline, para-bromoaniline and para-iodoaniline) which display contrasting masses and theoretical ΩHe, which differ by as much as 15.7 A2 (19.5%) but similar charge distributions. The deprotonated isomeric pair of trans-oleic acid and cis-oleic acid possessing nearly identical theoretical ΩHe and ΩN2 as well as similar charge distributions, remained unresolved. Interestingly, an inversion of drift-times were observed for the 1,3-dialkylimidazolium ions when comparing He, N2 and N2O. Using density functional theory as a means of examining the ions electronic structure, and He and N2-based trajectory method algorithm, we discuss the effect of the long-range charge induced dipole attractive and short-range Van der Waals forces involved in the TWIM separation in drift-gases of differing polarizabilities. We therefore propose that examining the electronic structure of the ions under investigation may potentially indicate whether the use of more polarizable drift-gases could improve separation and the overall success of TWIM-MS analysis. Copyright © 2013 John Wiley & Sons, Ltd.
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- 2013
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32. The chemical biology of HNO signaling
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Christopher L. Bianco, Michael D. Bartberger, Jon M. Fukuto, and John P. Toscano
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0301 basic medicine ,Biological signaling ,Biophysics ,Chemical biology ,Nitric Oxide ,Biochemistry ,Antioxidants ,Article ,03 medical and health sciences ,chemistry.chemical_compound ,Molecule ,Animals ,Humans ,Reactivity (chemistry) ,Sulfhydryl Compounds ,Selenoproteins ,Molecular Biology ,Nitrogen oxides ,Heart Failure ,030102 biochemistry & molecular biology ,Nitroxyl ,Aldehyde Dehydrogenase ,Nitric oxide metabolism ,Combinatorial chemistry ,030104 developmental biology ,chemistry ,Nitrogen Oxides ,Protein Binding ,Signal Transduction - Abstract
Nitroxyl (HNO) is a simple molecule with significant potential as a pharmacological agent. For example, its use in the possible treatment of heart failure has received recent attention due to its unique therapeutic properties. Recent progress has been made on the elucidation of the mechanisms associated with its biological signaling. Importantly, the biochemical mechanisms described for HNO bioactivity are consistent with its unique and novel chemical properties/reactivity. To date, much of the biology of HNO can be associated with interactions and modification of important regulatory thiol proteins. Herein will be provided a description of HNO chemistry and how this chemistry translates to some of its reported biological effects.
- Published
- 2016
33. Stacking with No Planarity?
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Michael D. Bartberger and Hakan Gunaydin
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0301 basic medicine ,Computer science ,Organic Chemistry ,Stacking ,computer.software_genre ,Biochemistry ,humanities ,Planarity testing ,03 medical and health sciences ,Crystallography ,030104 developmental biology ,Drug Discovery ,Side chain ,Molecule ,Data mining ,computer - Abstract
This viewpoint describes the results obtained from matched molecular pair analyses and quantum mechanics calculations that show unsaturated rings found in drug-like molecules may be replaced with their saturated counterparts without losing potency even if they are engaged in stacking interactions with the side chains of aromatic residues.
- Published
- 2016
34. Application of 1,1-ADEQUATE, HMBC, and Density Functional Theory To Determine Regioselectivity in the Halogenation of Pyridine N-Oxides
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Ying Chen, Michael D. Bartberger, and Tsang-Lin Hwang
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010405 organic chemistry ,Stereochemistry ,Chemical shift ,Organic Chemistry ,Substituent ,Halogenation ,Regioselectivity ,010402 general chemistry ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,chemistry.chemical_compound ,Deprotonation ,chemistry ,Computational chemistry ,Yield (chemistry) ,Structural isomer ,Density functional theory ,Physical and Theoretical Chemistry - Abstract
The 1,1-ADEQUATE spectrum clearly shows specific two-bond proton to carbon correlations to unequivocally distinguish the major and minor regioisomers of ortho-halogenated pyridines and to aid in assignment of the corresponding proton and carbon chemical shifts. M06-2X/6-31+G(d,p) free energies of the regioisomeric intermediates arising from deprotonation correctly predict the experimentally observed preference and thus can be used to tune the substituent pattern to yield a desired regiochemical outcome.
- Published
- 2016
35. An Efficient, Regioselective Amination of 3,5-Disubstituted Pyridine N-Oxides Using Saccharin as an Ammonium Surrogate
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Jason S. Tedrow, Robert P. Farrell, Michael D. Bartberger, Maria Victoria Silva Elipe, and Filisaty Vounatsos
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Molecular Structure ,Pyridines ,Chemistry ,Organic Chemistry ,Aminopyridines ,Regioselectivity ,Stereoisomerism ,Biochemistry ,Adduct ,Quaternary Ammonium Compounds ,chemistry.chemical_compound ,Saccharin ,Pyridine ,Combinatorial Chemistry Techniques ,Organic chemistry ,Ammonium ,Physical and Theoretical Chemistry ,psychological phenomena and processes ,Amination - Abstract
A process for the regioselective amination of unsymmetrical 3,5-substituted pyridine N-oxides has been developed utilizing cheap, readily available saccharin as an ammonium surrogate. High conversions of the corresponding saccharin adducts have been achieved under mild reaction conditions. In situ deprotection under acidic conditions allows for a one-pot process to substituted aminopyridines. High regioselectivities were obtained from a variety of 3,5-disubstituted pyridine N-oxides.
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- 2012
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36. Structure guided P1′ modifications of HEA derived β-secretase inhibitors for the treatment of Alzheimer’s disease
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Vinod F. Patel, Thomas T. Nguyen, Lewis D. Pennington, Daniel B. Horne, Michael D. Bartberger, Holger Monenschein, Stephen Hitchcock, and Wenge Zhong
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Clinical Biochemistry ,Pharmaceutical Science ,Cathepsin D ,Biochemistry ,Structure-Activity Relationship ,stomatognathic system ,Aspartate protease ,Alzheimer Disease ,Catalytic Domain ,Drug Discovery ,Ethylamines ,Humans ,Moiety ,Computer Simulation ,Protease Inhibitors ,Molecular Biology ,Binding Sites ,Chemistry ,Organic Chemistry ,Toxicity ,Microsomes, Liver ,Microsome ,β secretase ,Molecular Medicine ,Amine gas treating ,Amyloid Precursor Protein Secretases ,Selectivity - Abstract
The synthesis and SAR of a series of BACE-1 hydroxyethyl amine inhibitors containing substitutions on a spirocyclobutyl moiety is described. Selectivity against cathepsin D, a related aspartyl protease with potential off target toxicity, and improved microsomal stability is exemplified.
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- 2012
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37. A Potent and Orally Efficacious, Hydroxyethylamine-Based Inhibitor of β-Secretase
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Kui Chen, Daniel La, Michael D. Bartberger, Russell Graceffa, Thomas T. Nguyen, Tisha San Miguel, E. Allen Sickmier, Ryan Brown, Vivian S. W. Li, Stephen J. Wood, Lewis D. Pennington, James Brown, Jianhua Zhang, Craig E. Masse, Holger Monenschein, Patricia Lopez, Dean Hickman, Brian K. Albrecht, May Xue, Michael Croghan, Scott Harried, Safura Babu-Khan, Yuan Cheng, Yi Luo, Martin Citron, Matthew R. Kaller, Patricia Amarante, Wenge Zhong, Paul H. Wen, Bryant Yang, Robert C. Wahl, Matthew Weiss, Chuck Kriemen, Stephen Hitchcock, Vinod F. Patel, Ted Judd, and Toni Williamson
- Subjects
chemistry.chemical_classification ,Enzyme ,biology ,Chemistry ,Cerebral Spinal Fluid ,Organic Chemistry ,Drug Discovery ,β secretase ,Amyloid precursor protein ,biology.protein ,Potency ,Pharmacology ,Biochemistry - Abstract
β-Secretase inhibitors are potentially disease-modifying treatments for Alzheimer's disease. Previous efforts in our laboratory have resulted in hydroxyethylamine-derived inhibitors such as 1 with low nanomolar potency against β-site amyloid precursor protein cleaving enzyme (BACE). When dosed intravenously, compound 1 was also shown to significantly reduce Aβ40 levels in plasma, brain, and cerebral spinal fluid. Herein, we report further optimizations that led to the discovery of inhibitor 16 as a novel, potent, and orally efficacious BACE inhibitor.
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- 2012
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38. Design and Preparation of a Potent Series of Hydroxyethylamine Containing β-Secretase Inhibitors That Demonstrate Robust Reduction of Central β-Amyloid
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Yuan Cheng, Matthew R. Kaller, Steven W. Louie, Martin Citron, Lewis D. Pennington, Daniel S. La, Matthew Weiss, Stephen J. Wood, Wenge Zhong, Michael Croghan, Toni Williamson, Scott Harried, James Brown, Kui Chen, Tisha San Miguel, Ronke Imbeah-Ampiah, Holger Monenschein, Qiufen Xue, Hongbing Huang, Patricia Lopez, Claire Rattan, Thomas Dineen, Daniel B. Horne, E. Allen Sickmier, Dean Hickman, Safura Babu-Khan, Charles Kreiman, Vivian S. W. Li, Paul H. Wen, Michael D. Bartberger, Russell Graceffa, Robert C. Wahl, Thomas T. Nguyen, Bryant Yang, Ted Judd, Joel Esmay, Vinod F. Patel, and Stephen Hitchcock
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Male ,Models, Molecular ,Protein Conformation ,Administration, Oral ,Biological Availability ,Stereoisomerism ,Pharmacology ,Crystallography, X-Ray ,Rats, Sprague-Dawley ,Structure-Activity Relationship ,Dogs ,Pharmacokinetics ,Oral administration ,Drug Discovery ,Ethylamines ,Animals ,Aspartic Acid Endopeptidases ,Humans ,Structure–activity relationship ,ATP Binding Cassette Transporter, Subfamily B, Member 1 ,chemistry.chemical_classification ,Amyloid beta-Peptides ,Brain ,Dioxolanes ,Macaca mulatta ,Peptide Fragments ,Rats ,Bioavailability ,Protein Transport ,Enzyme ,chemistry ,Biochemistry ,Drug Design ,Microsomes, Liver ,Microsome ,Molecular Medicine ,Efflux ,Amyloid Precursor Protein Secretases - Abstract
A series of potent hydroxyethyl amine (HEA) derived inhibitors of β-site APP cleaving enzyme (BACE1) was optimized to address suboptimal pharmacokinetics and poor CNS partitioning. This work identified a series of benzodioxolane analogues that possessed improved metabolic stability and increased oral bioavailability. Subsequent efforts focused on improving CNS exposure by limiting susceptibility to Pgp-mediated efflux and identified an inhibitor which demonstrated robust and sustained reduction of CNS β-amyloid (Aβ) in Sprague-Dawley rats following oral administration.
- Published
- 2012
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39. Design and Synthesis of Potent, Orally Efficacious Hydroxyethylamine Derived β-Site Amyloid Precursor Protein Cleaving Enzyme (BACE1) Inhibitors
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Paul H. Wen, Robert C. Wahl, Michael Croghan, Ronke Imbeah-Ampiah, Paul Acton, Stephen J. Wood, Charles Kreiman, Vivian S. W. Li, Qiufen Xue, Lewis D. Pennington, Safura Babu-Khan, Daniel B. Horne, Thomas Dineen, Wenge Zhong, Scott Harried, Douglas A. Whittington, Dean Hickman, James Brown, Martin Citron, Matthew Weiss, Daniel S. La, Holger Monenschein, Bryant Yang, E. Allen Sickmier, Tisha San Miguel, Robert T. Dunn, Russell Graceffa, Patricia Lopez, Toni Williamson, Hongbing Huang, Yuan Cheng, Kui Chen, Matthew R. Kaller, Michael D. Bartberger, Steven W. Louie, Hugo M. Vargas, Stephen Hitchcock, Thomas T. Nguyen, Vinod F. Patel, Ted Judd, and Joel Esmay
- Subjects
Male ,Models, Molecular ,Protein Conformation ,Swine ,Administration, Oral ,Peptide ,In Vitro Techniques ,Pharmacology ,Crystallography, X-Ray ,Inhibitory postsynaptic potential ,Cell Line ,Rats, Sprague-Dawley ,Structure-Activity Relationship ,Dogs ,Pharmacokinetics ,mental disorders ,Drug Discovery ,Amyloid precursor protein ,Animals ,Aspartic Acid Endopeptidases ,Cytochrome P-450 CYP3A ,Cytochrome P-450 Enzyme Inhibitors ,Humans ,Spiro Compounds ,Dosing ,chemistry.chemical_classification ,Amyloid beta-Peptides ,Cardiovascular safety ,biology ,Brain ,Stereoisomerism ,Blood Proteins ,Peptide Fragments ,Rats ,Bioavailability ,Thiazoles ,Enzyme ,Biochemistry ,chemistry ,Drug Design ,Microsomes, Liver ,biology.protein ,Molecular Medicine ,Amyloid Precursor Protein Secretases ,Protein Binding - Abstract
We have previously shown that hydroxyethylamines can be potent inhibitors of the BACE1 enzyme and that the generation of BACE1 inhibitors with CYP 3A4 inhibitory activities in this scaffold affords compounds (e.g., 1) with sufficient bioavailability and pharmacokinetic profiles to reduce central amyloid-β peptide (Aβ) levels in wild-type rats following oral dosing. In this article, we describe further modifications of the P1-phenyl ring of the hydroxyethylamine series to afford potent, dual BACE1/CYP 3A4 inhibitors which demonstrate improved penetration into the CNS. Several of these compounds caused robust reduction of Aβ levels in rat CSF and brain following oral dosing, and compound 37 exhibited an improved cardiovascular safety profile relative to 1.
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- 2012
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40. Fused Piperidines as a Novel Class of Potent and Orally Available Transient Receptor Potential Melastatin Type 8 (TRPM8) Antagonists
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Sonya G. Lehto, Weiya Wang, Narender R. Gavva, Hong Deng, Mark H. Norman, Lana Klionsky, Nobuko Nishimura, Brad Youngblood, Phi Tang, Vu Van Ma, Jiyun Chen, Vijay Keshav Gore, Michael D. Bartberger, Nuria A. Tamayo, Tiffany L. Correll, and Yunxin Bo
- Subjects
Male ,Administration, Oral ,TRPM Cation Channels ,CHO Cells ,Pyrimidinones ,In Vitro Techniques ,Pharmacology ,Rats, Sprague-Dawley ,Structure-Activity Relationship ,chemistry.chemical_compound ,Transient receptor potential channel ,Cricetulus ,Piperidines ,In vivo ,Oral administration ,Cricetinae ,Drug Discovery ,TRPM8 ,Animals ,Structure–activity relationship ,Analgesics ,Chemistry ,Tetrahydroisoquinoline ,Icilin ,Antagonist ,Stereoisomerism ,Rats ,Microsomes, Liver ,Molecular Medicine ,Calcium - Abstract
The transient receptor potential melastatin type 8 (TRPM8) is a nonselective cation channel primarily expressed in a subpopulation of sensory neurons that can be activated by a wide range of stimuli, including menthol, icilin, and cold temperatures (
- Published
- 2012
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41. From Fragment Screening to In Vivo Efficacy: Optimization of a Series of 2-Aminoquinolines as Potent Inhibitors of Beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1)
- Author
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Timothy Powers, Stephen J. Wood, Ted Judd, Vivian S. W. Li, James Brown, E. Allen Sickmier, Klaus Michelsen, David J. St. Jean, Yi Luo, Dean Hickman, Yuan Cheng, Kui Chen, Stephen Hitchcock, Steven W. Louie, Patricia Lopez, Brad Jordan, Thomas Nixey, Robert T. Fremeau, Michael D. Bartberger, Paul H. Wen, Robert C. Wahl, and Claire Rattan
- Subjects
Male ,Models, Molecular ,Molecular model ,Drug Evaluation, Preclinical ,Crystallography, X-Ray ,Cell Line ,Rats, Sprague-Dawley ,Structure-Activity Relationship ,In vivo ,Catalytic Domain ,mental disorders ,Drug Discovery ,Amyloid precursor protein ,Animals ,Aspartic Acid Endopeptidases ,Humans ,Potency ,Enzyme Inhibitors ,Aminoquinolines ,IC50 ,chemistry.chemical_classification ,Amyloid beta-Peptides ,Dose-Response Relationship, Drug ,Molecular Structure ,biology ,Ligand ,Brain ,Combinatorial chemistry ,Protein Structure, Tertiary ,Rats ,HEK293 Cells ,Enzyme ,Models, Chemical ,Biochemistry ,chemistry ,Biocatalysis ,biology.protein ,Molecular Medicine ,Amyloid Precursor Protein Secretases - Abstract
Using fragment-based screening of a focused fragment library, 2-aminoquinoline 1 was identified as an initial hit for BACE1. Further SAR development was supported by X-ray structures of BACE1 cocrystallized with various ligands and molecular modeling studies to expedite the discovery of potent compounds. These strategies enabled us to integrate the C-3 side chain on 2-aminoquinoline 1 extending deep into the P2' binding pocket of BACE1 and enhancing the ligand's potency. We were able to improve the BACE1 potency to subnanomolar range, over 10(6)-fold more potent than the initial hit (900 μM). Further elaboration of the physical properties of the lead compounds to those more consistent with good blood-brain barrier permeability led to inhibitors with greatly improved cellular activity and permeability. Compound 59 showed an IC(50) value of 11 nM on BACE1 and cellular activity of 80 nM. This compound was advanced into rat pharmacokinetic and pharmacodynamic studies and demonstrated significant reduction of Aβ levels in cerebrospinal fluid (CSF).
- Published
- 2011
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42. Discovery of a Potent, Orally Active 11β-Hydroxysteroid Dehydrogenase Type 1 Inhibitor for Clinical Study: Identification of (S)-2-((1S,2S,4R)-Bicyclo[2.2.1]heptan-2-ylamino)-5-isopropyl-5-methylthiazol-4(5H)-one (AMG 221)
- Author
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Clarence Hale, Martin Henriksson, Randall W. Hungate, Renee Komorowski, Kyung H. Gahm, Jiandong Zhang, Murielle M. Véniant, Janan Jona, Vivian S. W. Li, Andrew Hague, Maurice Emery, Christopher H. Fotsch, Steven R. Jordan, Smriti Joseph, David J. St. Jean, Lars Johansson, Minghan Wang, Rashid Syed, Jeffrey Adams, George A. Moniz, Rod Cupples, Ki Won Kim, Michael D. Bartberger, Jerk Vallgarda, Michelle Chen, and Meredith Williams
- Subjects
biology ,Bicyclic molecule ,Stereochemistry ,Chemistry ,Insulin ,medicine.medical_treatment ,Diastereomer ,In vitro ,11β-hydroxysteroid dehydrogenase type 1 ,In vivo ,Drug Discovery ,biology.protein ,medicine ,Molecular Medicine ,Epimer ,Isopropyl - Abstract
Thiazolones with an exo-norbornylamine at the 2-position and an isopropyl group on the 5-position are potent 11beta-HSD1 inhibitors. However, the C-5 center was prone to epimerization in vitro and in vivo, forming a less potent diastereomer. A methyl group was added to the C-5 position to eliminate epimerization, leading to the discovery of (S)-2-((1S,2S,4R)-bicyclo[2.2.1]heptan-2-ylamino)-5-isopropyl-5-methylthiazol-4(5H)-one (AMG 221). This compound decreased fed blood glucose and insulin levels and reduced body weight in diet-induced obesity mice.
- Published
- 2010
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43. Synthesis and conformational analysis of α,α-difluoroalkyl heteroaryl ethers
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Matthew R. Kaller, Stephen Hitchcock, Michael D. Bartberger, Wenge Zhong, Holger Monenschein, and Daniel B. Horne
- Subjects
Aryl ,Organic Chemistry ,Xenon difluoride ,Biochemistry ,Combinatorial chemistry ,Chloride ,chemistry.chemical_compound ,chemistry ,Drug Discovery ,Pyridine ,medicine ,Computational analysis ,Methylene ,medicine.drug - Abstract
We report the efficient synthesis of difluoroalkyl aryl ethers from the rearrangement of heteroaryl ketones and aldehydes, mediated by xenon difluoride and HF/pyridine in methylene chloride at room temperature. Computational analysis of difluoroalkylethers shows that there is potential to allow access to conformational space not accessible to the hydrogenated parent.
- Published
- 2009
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44. Development of a Practical Synthesis of a p38 MAP Kinase Inhibitor
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Annie Kasparian, Michael D. Bartberger, Robert D. Larsen, Philip Wheeler, Cecile Savarin, Tiffany L. Correll, Alan M. Allgeier, Charles Bernard, Oliver R. Thiel, Helming Tan, and Michal Achmatowicz
- Subjects
chemistry.chemical_compound ,biology ,Chemistry ,Stereochemistry ,Mitogen-activated protein kinase ,Organic Chemistry ,Vibrational circular dichroism ,biology.protein ,Physical and Theoretical Chemistry ,Phthalazine - Abstract
A practical synthesis of the phthalazine-based p38 MAP kinase inhibitor [(S)-2] was needed for an ongoing program. Vibrational circular dichroism provided the assignment of the absolute stereochemi...
- Published
- 2009
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45. C-Nitroso Donors of Nitric Oxide
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Harinath Chakrapani, Eric J. Toone, and Michael D. Bartberger
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Chemistry ,Organic Chemistry ,Kinetics ,Temperature ,Biological activity ,Nitroso ,Nitric Oxide ,Decomposition ,Medicinal chemistry ,Nitric oxide ,Homolysis ,chemistry.chemical_compound ,Solvents ,Animals ,Organic chemistry ,Reactivity (chemistry) ,Rabbits ,Aorta ,Bond cleavage ,Muscle Contraction ,Nitroso Compounds - Abstract
A complete understanding of the biological activity of nitric oxide (NO) is complicated by the different reactivity profiles of its various species and by the often complex decomposition behavior of the NO progenitors in common use. Here, we report that appropriately substituted C-nitroso compounds act solely as donors of neutral nitric oxide through a first-order homolytic C-N bond scission to release up to 88% nitric oxide in DMSO at 25 degrees C. The reaction produces a carbon radical, and the yield of nitric oxide is dependent on the availability of radical traps. C-Nitroso compounds are sources of biologically active neutral NO and display potent NO bioactivity in a rabbit aortic ring assay.
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- 2009
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46. 2-Amino-1,3-thiazol-4(5H)-ones as Potent and Selective 11β-Hydroxysteroid Dehydrogenase Type 1 Inhibitors: Enzyme−Ligand Co-Crystal Structure and Demonstration of Pharmacodynamic Effects in C57Bl/6 Mice
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Meredith Williams, Sonja Gustafsson, Carlos Orihuela, Murielle M. Véniant, Minghan Wang, Evert Homan, Gunnar Palm, George A. Moniz, Aiwen Li, Victor M. Castro, Michael D. Bartberger, Jiandong Zhang, Christopher H. Fotsch, Dean Hickman, Guy Matsumoto, Michelle Chen, Steven R. Jordan, Clarence Hale, Renee Komorowski, Maurice Emery, Kenneth Mcrae, and Lars Johansson
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Male ,Models, Molecular ,Hydrocortisone ,Stereochemistry ,Adamantane ,Dehydrogenase ,Crystallography, X-Ray ,Ligands ,Chemical synthesis ,Mice ,Structure-Activity Relationship ,Oxidoreductase ,In vivo ,11-beta-Hydroxysteroid Dehydrogenase Type 1 ,Drug Discovery ,Animals ,Humans ,Hypoglycemic Agents ,Structure–activity relationship ,chemistry.chemical_classification ,Molecular Structure ,biology ,Chemistry ,Stereoisomerism ,Triazoles ,Rats ,Cortisone ,Mice, Inbred C57BL ,Thiazoles ,Enzyme ,Adipose Tissue ,Diabetes Mellitus, Type 2 ,Liver ,Biochemistry ,Enzyme inhibitor ,biology.protein ,Molecular Medicine ,hormones, hormone substitutes, and hormone antagonists ,Ex vivo - Abstract
11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1) has attracted considerable attention during the past few years as a potential target for the treatment of diseases associated with metabolic syndrome. In our ongoing work on 11beta-HSD1 inhibitors, a series of new 2-amino-1,3-thiazol-4(5 H)-ones were explored. By inserting various cycloalkylamines at the 2-position and alkyl groups or spirocycloalkyl groups at the 5-position of the thiazolone, several potent 11beta-HSD1 inhibitors were identified. An X-ray cocrystal structure of human 11beta-HSD1 with compound 6d (Ki=28 nM) revealed a large lipophilic pocket accessible by substitution off the 2-position of the thiazolone. To increase potency, analogues were prepared with larger lipophilic groups at this position. One of these compounds, the 3-noradamantyl analogue 8b, was a potent inhibitor of human 11beta-HSD1 (Ki=3 nM) and also inhibited 11beta-HSD1 activity in lean C57Bl/6 mice when evaluated in an ex vivo adipose and liver cortisone to cortisol conversion assay.
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- 2008
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47. The First Practical and Efficient One-Pot Synthesis of 6-Substituted 7-Azaindoles via a Reissert-Henze Reaction
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Michael D. Bartberger, Troy Soukup, Steven Sukits, Thomas Storz, and Chris Wilde
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chemistry.chemical_classification ,Addition elimination ,chemistry.chemical_compound ,chemistry ,Cyanide ,Organic Chemistry ,One-pot synthesis ,Acid salt ,Combinatorial chemistry ,Catalysis - Abstract
A variety of 6-substituted 7-azaindoles (30 examples) were obtained via selective O-methylation of 7-azaindole- N-oxide M-chlorobenzoic acid salt and subsequent, base-catalyzed one-pot reaction with a range of N-, O-, S-nucleophiles or cyanide.
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- 2008
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48. The discovery of 2-anilinothiazolones as 11β-HSD1 inhibitors
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Maurice Emery, Rod Cupples, David J. St. Jean, George A. Moniz, David Pyring, Randall W. Hungate, Chester Chenguang Yuan, Lars Johansson, Aiwen Li, Michelle Chen, Qingyian Liu, Meredith Williams, Steven R. Jordan, Lynn Cai, Lars Tedenborg, Minghan Wang, Christopher H. Fotsch, Nianhe Han, Michael D. Bartberger, Jiandong Zhang, Clarence Hale, Yaxiong Sun, and Ben C. Askew
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Stereochemistry ,Clinical Biochemistry ,Substituent ,Pharmaceutical Science ,CHO Cells ,Crystallography, X-Ray ,Biochemistry ,Chemical synthesis ,Structure-Activity Relationship ,chemistry.chemical_compound ,Cricetulus ,Cricetinae ,11-beta-Hydroxysteroid Dehydrogenase Type 1 ,Drug Discovery ,medicine ,Animals ,Humans ,Structure–activity relationship ,Molecular Biology ,chemistry.chemical_classification ,Molecular Structure ,biology ,Organic Chemistry ,Aromatic amine ,Active site ,Fluorine ,Human serum albumin ,Rats ,Thiazoles ,chemistry ,Enzyme inhibitor ,biology.protein ,Molecular Medicine ,Chlorine ,Isopropyl ,medicine.drug - Abstract
A series of 2-anilinothiazolones were prepared as inhibitors of 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1). The most potent compounds contained a 2-chloro or 2-fluoro group on the aniline ring with an isopropyl substituent on the 5-position of the thiazolone ring (compounds 2 and 3, respectively). The binding mode was determined through the X-ray co-crystal structure of the enzyme with compound 3. This compound was also approximately 70-fold selective over 11beta-HSD2 and was orally bioavailable in rat pharmacokinetic studies. However, compound 3 was >580-fold less active in the 11beta-HSD1 cell assay when tested in the presence of 3% human serum albumin.
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- 2007
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49. Accelerating effect of triazolyl and related heteroaryl substituents on SNAr reactions: evidence of hydrogen-bond stabilized transition states
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Hao Wang, Michael D. Bartberger, and Wenyuan Qian
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Models, Molecular ,Nucleophilic addition ,Molecular Structure ,Hydrogen bond ,Chemistry ,Substituent ,Electrons ,Hydrogen Bonding ,General Chemistry ,Triazoles ,Photochemistry ,Biochemistry ,Medicinal chemistry ,Catalysis ,Transition state ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Nucleophile ,Nucleophilic aromatic substitution ,Quantum Theory ,Solvent effects ,Amines ,Lone pair - Abstract
The remarkable accelerating effect of 1,2,3-triazolyl substituents on SNAr reactions has been investigated through systematic experiments and density functional theory calculations. The lone pair electrons of an ortho-triazolo substituent play a key role in lowering the activation energy for nucleophilic addition via formation of a preferential hydrogen bond with the amine nucleophile at the transition state for addition. In an extension of this finding, a series of related heteroaryl groups with similar electron pair donor properties have also been found to facilitate SNAr reactions. The experimentally determined solvent effect provides further support for this rationale, which was utilized to achieve an ortho-selective substitution on a difluoroarene substrate.
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- 2015
50. Structural resolution of 4-substituted proline diastereomers with ion mobility spectrometry via alkali metal ion cationization
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Iain D. G. Campuzano, Michael D. Bartberger, and Tawnya G. Flick
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Models, Molecular ,Proline ,Nitrogen ,Carboxylic acid ,Inorganic chemistry ,Molecular Conformation ,Protonation ,Pyrrolidine ,Mass Spectrometry ,Analytical Chemistry ,Ion ,Metal ,chemistry.chemical_compound ,Deprotonation ,Qualitative inorganic analysis ,chemistry.chemical_classification ,Metals, Alkali ,Stereoisomerism ,Crystallography ,Hydroxyproline ,chemistry ,visual_art ,visual_art.visual_art_medium ,Solvents ,Protons ,Chirality (chemistry) - Abstract
The chirality of substituents on an amino acid can significantly change its mode of binding to a metal ion, as shown here experimentally by traveling wave ion mobility spectrometry-mass spectrometry (TWIMS-MS) of different proline isomeric molecules complexed with alkali metal ions. Baseline separation of the cis- and trans- forms of both hydroxyproline and fluoroproline was achieved using TWIMS-MS via metal ion cationization (Li(+), Na(+), K(+), and Cs(+)). Density functional theory calculations indicate that differentiation of these diastereomers is a result of the stabilization of differing metal-complexed forms adopted by the diastereomers when cationized by an alkali metal cation, [M + X](+) where X = Li, Na, K, and Cs, versus the topologically similar structures of the protonated molecules, [M + H](+). Metal-cationized trans-proline variants exist in a linear salt-bridge form where the metal ion interacts with a deprotonated carboxylic acid and the proton is displaced onto the nitrogen atom of the pyrrolidine ring. In contrast, metal-cationized cis-proline variants adopt a compact structure where the carbonyl of the carboxylic acid, nitrogen atom, and if available, the hydroxyl and fluorine substituent solvate the metal ion. Experimentally, it was observed that the resolution between alkali metal-cationized cis- and trans-proline variants decreases as the size of the metal ion increases. Density functional theory demonstrates that this is due to the decreasing stability of the compact charge-solvated cis-proline structure with increased metal ion radius, likely a result of steric hindrance and/or weaker binding to the larger metal ion. Furthermore, the unique structures adopted by the alkali metal-cationized cis- and trans-proline variants results in these molecules having significantly different quantum mechanically calculated dipole moments, a factor that can be further exploited to improve the diastereomeric resolution when utilizing a drift gas with a higher polarizability constant.
- Published
- 2015
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