34 results on '"Meusnier, Isabelle"'
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2. The unconventional resistance protein PTR recognizes the Magnaporthe oryzaeeffector AVR-Pita in an allele-specific manner
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Xiao, Gui, Laksanavilat, Nutthalak, Cesari, Stella, Lambou, Karine, Baudin, Maël, Jalilian, Ahmad, Telebanco-Yanoria, Mary Jeanie, Chalvon, Veronique, Meusnier, Isabelle, Fournier, Elisabeth, Tharreau, Didier, Zhou, Bo, Wu, Jun, and Kroj, Thomas
- Abstract
Blast disease caused by the fungus Magnaporthe oryzaeis one of the most devastating rice diseases. Disease resistance genes such as Pi-taor Pi-ta2are critical in protecting rice production from blast. Published work reports that Pi-tacodes for a nucleotide-binding and leucine-rich repeat domain protein (NLR) that recognizes the fungal protease-like effector AVR-Pita by direct binding. However, this model was challenged by the recent discovery that Pi-ta2 resistance, which also relies on AVR-Pita detection, is conferred by the unconventional resistance gene Ptr, which codes for a membrane protein with a cytoplasmic armadillo repeat domain. Here, using NLR Pi-taand PtrRNAi knockdown and CRISPR/Cas9 knockout mutant rice lines, we found that AVR-Pita recognition relies solely on Ptrand that the NLR Pi-tahas no role in it, indicating that it is not the Pi-taresistance gene. Different alleles of Ptrconfer different recognition specificities. The A allele of Ptr(PtrA) detects all natural sequence variants of the effector and confers Pi-ta2 resistance, while the B allele of Ptr(PtrB) recognizes a restricted set of AVR-Pitaalleles and, thereby, confers Pi-ta resistance. Analysis of the natural diversity in AVR-Pitaand of mutant and transgenic strains identified one specific polymorphism in the effector sequence that controls escape from PtrB-mediated resistance. Taken together, our work establishes that the M. oryzaeeffector AVR-Pita is detected in an allele-specific manner by the unconventional rice resistance protein Ptr and that the NLR Pi-ta has no function in Pi-ta resistance and the recognition of AVR-Pita.
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- 2024
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3. Adaptive evolution in virulence effectors of the rice blast fungus Pyricularia oryzae
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Le Naour—Vernet, Marie, primary, Charriat, Florian, additional, Gracy, Jérôme, additional, Cros-Arteil, Sandrine, additional, Ravel, Sébastien, additional, Veillet, Florian, additional, Meusnier, Isabelle, additional, Padilla, André, additional, Kroj, Thomas, additional, Cesari, Stella, additional, and Gladieux, Pierre, additional
- Published
- 2023
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4. Specific recognition of two MAX effectors by integrated HMA domains in plant immune receptors involves distinct binding surfaces
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Guo, Liwei, Cesari, Stella, de Guillen, Karine, Chalvon, Véronique, Mammri, Léa, Ma, Mengqi, Meusnier, Isabelle, Bonnot, François, Padilla, André, Peng, You-Liang, Liu, Junfeng, and Kroj, Thomas
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- 2018
5. The RLCK subfamily VII‐4 controls pattern‐triggered immunity and basal resistance to bacterial and fungal pathogens in rice
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Jalilian, Ahmad, primary, Bagheri, Abdolreza, additional, Chalvon, Véronique, additional, Meusnier, Isabelle, additional, Kroj, Thomas, additional, and Kakhki, Amin Mirshamsi, additional
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- 2023
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6. Evolution of the rice blast pathogen on spatially structured rice landraces maintains multiple generalist fungal lineages
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Ali, Sajid, primary, Gladieux, Pierre, additional, Ravel, Sebastien, additional, Adreit, Henri, additional, Meusnier, Isabelle, additional, Milazzo, Joelle, additional, Cros‐Arteil, Sandrine, additional, Bonnot, François, additional, Jin, Baihui, additional, Dumartinet, Thomas, additional, Charriat, Florian, additional, Lassagne, Alexandre, additional, He, Xiahong, additional, Tharreau, Didier, additional, Huang, Huichuan, additional, Morel, Jean‐Benoît, additional, and Fournier, Elisabeth, additional
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- 2023
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7. Adaptive evolution in virulence effectors of the rice blast fungusPyricularia oryzae
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Le Naour--Vernet, Marie, primary, Charriat, Florian, additional, Gracy, Jérôme, additional, Cros-Arteil, Sandrine, additional, Ravel, Sébastien, additional, Veillet, Florian, additional, Meusnier, Isabelle, additional, Padilla, André, additional, Kroj, Thomas, additional, Cesari, Stella, additional, and Gladieux, Pierre, additional
- Published
- 2023
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8. Adaptive evolution in virulence effectors of the rice blast fungus Pyricularia oryzae
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Le Naour-Vernet, Marie, Charriat, Florian, Gracy, Jérôme, Cros-Arteil, Sandrine, Ravel, Sébastien, Meusnier, Isabelle, Padilla, André, Kroj, Thomas, Cesari, Stella, Gladieux, Pierre, Le Naour-Vernet, Marie, Charriat, Florian, Gracy, Jérôme, Cros-Arteil, Sandrine, Ravel, Sébastien, Meusnier, Isabelle, Padilla, André, Kroj, Thomas, Cesari, Stella, and Gladieux, Pierre
- Abstract
Plant pathogens secrete proteins called effectors that target host cellular processes to promote disease. Recently, structure-based clustering has identified several families of fungal effectors that share a conserved three-dimensional structure despite remarkably variable amino-acid sequences and surface properties. To explore the selective forces that underlie the sequence variability of structurallyanalogous effectors, we focused on MAX effectors, a structural family of effectors that are major determinants of virulence in the rice blast fungus Pyricularia oryzae. Using structureinformed gene annotation, we identified 58 to 78 MAX effector genes per genome in a set of 120 isolates representing seven host-associated lineages. The expression of MAX effector genes was primarily restricted to the early biotrophic phase of infection and strongly influenced by the host plant. Pangenome analyses of MAX effectors demonstrated extensive presence/absence polymorphism and identified several candidate gene loss events possibly involved in host range adaptation. MAX effectors displayed high levels of standing variation and high rates of non-synonymous substitutions, pointing to widespread positive selection shaping their molecular diversity. Our work demonstrates that MAX effectors represent a highly dynamic compartment of the genome of P. oryzae, and suggests that MAX effectors are key players in molecular coevolutionary interactions with plant hosts.
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- 2023
9. Evolution of the rice blast pathogen on spatially structured rice landraces maintains multiple generalist fungal lineages
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Ali, Sajid, Gladieux, Pierre, Ravel, Sébastien, Adreit, Henri, Meusnier, Isabelle, Milazzo, Joëlle, Cros-Arteil, Sandrine, Bonnot, François, Jin, Baihui, Dumartinet, Thomas, Charriat, Florian, Lassagne, Alexandre, He, Xiahong, Tharreau, Didier, Huang, Huichuan, Morel, Jean-Benoit, Fournier, Elisabeth, Ali, Sajid, Gladieux, Pierre, Ravel, Sébastien, Adreit, Henri, Meusnier, Isabelle, Milazzo, Joëlle, Cros-Arteil, Sandrine, Bonnot, François, Jin, Baihui, Dumartinet, Thomas, Charriat, Florian, Lassagne, Alexandre, He, Xiahong, Tharreau, Didier, Huang, Huichuan, Morel, Jean-Benoit, and Fournier, Elisabeth
- Abstract
Traditional agrosystems, where humans, crops and microbes have coevolved over long periods, can serve as models to understand the ecoevolutionary determinants of disease dynamics and help the engineering of durably resistant agrosystems. Here, we investigated the genetic and phenotypic relationship between rice (Oryza sativa) landraces and their rice blast pathogen (Pyricularia oryzae) in the traditional Yuanyang terraces of flooded rice paddies in China, where rice landraces have been grown and bred over centuries without significant disease outbreaks. Analyses of genetic subdivision revealed that indica rice plants clustered according to landrace names. Three new diverse lineages of rice blast specific to the Yuanyang terraces coexisted with lineages previously detected at the worldwide scale. Population subdivision in the pathogen population did not mirror pattern of population subdivision in the host. Measuring the pathogenicity of rice blast isolates on landraces revealed generalist life history traits. Our results suggest that the implementation of disease control strategies based on the emergence or maintenance of a generalist lifestyle in pathogens may sustainably reduce the burden of disease in crops.
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- 2023
10. Coevolution with Spatially Structured Rice Landraces Maintains Multiple Generalist Lineages in the Rice Blast Pathogen
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Ali, Sajid, primary, Gladieux, Pierre, additional, Ravel, Sebastien, additional, Adreit, Henri, additional, Meusnier, Isabelle, additional, Milazzo, Joelle, additional, Cros-Arteil, Sandrine, additional, Bonnot, François, additional, Jin, Baihui, additional, Dumartinet, Thomas, additional, Charriat, Florian, additional, Lassagne, Alexandre, additional, He, Xiahong, additional, Tharreau, Didier, additional, Huang, Huichuan, additional, Morel, Jean-Benoît, additional, and Fournier, Elisabeth, additional
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- 2021
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11. Testing advances in molecular discrimination among Chinook salmon life histories: evidence from a blind test
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Banks, Michael A., Jacobson, David P., Meusnier, Isabelle, Greig, Carolyn A., Rashbrook, Vanessa K., Ardren, William R., Smith, Christian T., Bernier-Latmani, Jeremiah, Van Sickle, John, and OʼMalley, Kathleen G.
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- 2014
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12. A universal DNA mini-barcode for biodiversity analysis
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Hebert Paul DN, Hickey Donal A, Landry Jean-François, Singer Gregory AC, Meusnier Isabelle, and Hajibabaei Mehrdad
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Biotechnology ,TP248.13-248.65 ,Genetics ,QH426-470 - Abstract
Abstract Background The goal of DNA barcoding is to develop a species-specific sequence library for all eukaryotes. A 650 bp fragment of the cytochrome c oxidase 1 (CO1) gene has been used successfully for species-level identification in several animal groups. It may be difficult in practice, however, to retrieve a 650 bp fragment from archival specimens, (because of DNA degradation) or from environmental samples (where universal primers are needed). Results We used a bioinformatics analysis using all CO1 barcode sequences from GenBank and calculated the probability of having species-specific barcodes for varied size fragments. This analysis established the potential of much smaller fragments, mini-barcodes, for identifying unknown specimens. We then developed a universal primer set for the amplification of mini-barcodes. We further successfully tested the utility of this primer set on a comprehensive set of taxa from all major eukaryotic groups as well as archival specimens. Conclusion In this study we address the important issue of minimum amount of sequence information required for identifying species in DNA barcoding. We establish a novel approach based on a much shorter barcode sequence and demonstrate its effectiveness in archival specimens. This approach will significantly broaden the application of DNA barcoding in biodiversity studies.
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- 2008
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13. Une base de données dédiée aux insectes nuisibles rencontrés dans les collections patrimoniales
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Fohrer, Fabien, primary, Martinez, Michel, additional, and Meusnier, Isabelle, additional
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- 2017
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14. Pathogen effectors and plant immunity determine specialization of the blast fungus to rice subspecies
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Liao, Jingjing, primary, Huang, Huichuan, additional, Meusnier, Isabelle, additional, Adreit, Henri, additional, Ducasse, Aurélie, additional, Bonnot, François, additional, Pan, Lei, additional, He, Xiahong, additional, Kroj, Thomas, additional, Fournier, Elisabeth, additional, Tharreau, Didier, additional, Gladieux, Pierre, additional, and Morel, Jean-Benoit, additional
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- 2016
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15. Pathogen effectors and plant immunity determine specialization of the blast fungus to rice subspecies
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Liao, Jingjing, Huang, Huichuan, Meusnier, Isabelle, Adreit, Henri, Ducasse, Aurélie, Bonnot, François, Pan, Lei, He, Xiahong, Kroj, Thomas, Fournier, Elisabeth, Tharreau, Didier, Gladieux, Pierre, Morel, Jean-Benoit, Liao, Jingjing, Huang, Huichuan, Meusnier, Isabelle, Adreit, Henri, Ducasse, Aurélie, Bonnot, François, Pan, Lei, He, Xiahong, Kroj, Thomas, Fournier, Elisabeth, Tharreau, Didier, Gladieux, Pierre, and Morel, Jean-Benoit
- Abstract
Understanding how fungi specialize on their plant host is crucial for developing sustainable disease control. A traditional, centuries-old rice agro-system of the Yuanyang terraces was used as a model to show that virulence effectors of the rice blast fungus Magnaporthe oryzaeh play a key role in its specialization on locally grown indica or japonica local rice subspecies. Our results have indicated that major differences in several components of basal immunity and effector-triggered immunity of the japonica and indica rice varieties are associated with specialization of M. oryzae. These differences thus play a key role in determining M. oryzae host specificity and may limit the spread of the pathogen within the Yuanyang agro-system. Specifically, the AVR-Pia effector has been identified as a possible determinant of the specialization of M. oryzae to local japonica rice.
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- 2016
16. Author response: Pathogen effectors and plant immunity determine specialization of the blast fungus to rice subspecies
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Liao, Jingjing, primary, Huang, Huichuan, primary, Meusnier, Isabelle, additional, Adreit, Henri, additional, Ducasse, Aurélie, additional, Bonnot, François, additional, Pan, Lei, additional, He, Xiahong, additional, Kroj, Thomas, additional, Fournier, Elisabeth, additional, Tharreau, Didier, additional, Gladieux, Pierre, additional, and Morel, Jean-Benoit, additional
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- 2016
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17. Specific recognition of two MAX effectors by integrated HMA domains in plant immune receptors involves distinct binding surfaces.
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Liwei Guo, Mengqi Ma, You-Liang Peng, Junfeng Liu, Cesari, Stella, Chalvon, Véronique, Meusnier, Isabelle, Kroj, Thomas, Bonnot, François, de Guillen, Karine, Mammri, Léa, and Padilla, André
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PLANT immunology ,PYRICULARIA oryzae ,RICE ,LEUCINE ,NUCLEOTIDES - Abstract
The structurally conserved but sequence-unrelated MAX (Magnaporthe oryzae avirulence and ToxB-like) effectors AVR1-CO39 and AVR-PikD from the blast fungus M. oryzae are recognized by the rice nucleotide-binding domain and leucine-rich repeat proteins (NLRs) RGA5 and Pikp-1, respectively. This involves, in both cases, direct interaction of the effector with a heavy metal-associated (HMA) integrated domain (ID) in the NLR. Here, we solved the crystal structures of a C-terminal fragment of RGA5 carrying the HMA ID (RGA5_S), alone, and in complex with AVR1-CO39 and compared it to the structure of the Pikp1
HMA /AVR-PikD complex. In both complexes, HMA ID/MAX effector interactions involve antiparallel alignment of β-sheets from each partner. However, effector-binding occurs at different surfaces in Pikp1HMA and RGA5HMA , indicating that these interactions evolved independently by convergence of these two MAX effectors to the same type of plant target proteins. Interestingly, the effector-binding surface in RGA5HMA overlaps with the surface that mediates RGA5HMA self-interaction. Mutations in the HMA-binding interface of AVR1-CO39 perturb RGA5HMA -binding, in vitro and in vivo, and affect the recognition of M. oryzae in a rice cultivar containing Pi-CO39. Our study provides detailed insight into the mechanisms of effector recognition by NLRs, which has substantial implications for future engineering of NLRs to expand their recognition specificities. In addition, we propose, as a hypothesis for the understanding of effector diversity, that in the structurally conserved MAX effectors the molecular mechanism of host target protein-binding is conserved rather than the host target proteins themselves. [ABSTRACT FROM AUTHOR]- Published
- 2018
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18. Alfalfa breeding benefits from genomics of Medicago truncatula
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Julier, Bernadette, Meusnier, Isabelle, Unité de Recherche Pluridisciplinaire Prairies et Plantes Fourragères (P3F), and Institut National de la Recherche Agronomique (INRA)
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marker ,model species ,breeding ,[SDV]Life Sciences [q-bio] ,fungi ,[SDE]Environmental Sciences ,food and beverages ,candidate gene ,medicago sativa ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,medicago truncatula ,biochemical phenomena, metabolism, and nutrition - Abstract
International programs aim at developing knowledge and tools in the model species Medicago truncatula. Genetic resources, DNA sequences, markers, genetic and physical maps are now publicly available. These efforts contribute to improve breeding schemes of crop species such as alfalfa. However, transfer of information from M. truncatula to alfalfa is not straightforward. The article reviews the gain given by the model species to better analyze genetic determinism of breeding traits in alfalfa. It also shows that investments in alfalfa genomics (DNA sequences, SNP development) are needed to benefit from the model species.
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- 2010
19. Xylophanes lolita Vaglia & Haxaire, n. sp
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Vaglia, Thierry, Haxaire, Jean, Kitching, Ian J., Meusnier, Isabelle, and Rougerie, Rodolphe
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Lepidoptera ,Xylophanes lolita ,Insecta ,Arthropoda ,Animalia ,Sphingidae ,Biodiversity ,Xylophanes ,Taxonomy - Abstract
Xylophanes lolita Vaglia & Haxaire n. sp. (Figs. 5 a, 5 b, 9 a���c) Type material: Holotype (Figs. 5 a, 5 b; in coll. TV, to be deposited in the Insectarium of Montr��al, genital prep. # 271104 a, VAG- 375 / SPTVA 739 -07): ��, Brazil, Minas Gerais, Pote, 540 m., 30.xi. 2004, leg. Roney Alves dos Santos. Paratype (BC-Hax0781/ SOWA 788 -06): 1 ��, same data as holotype but 16.xi. 2004. Description: This species is described on the basis of combined evidence derived from morphology and genetic data (Fig. 13, clade # 1; Table 2). Overall, it is very similar to X. loelia but is immediately distinguishable by its larger size, wing shape, and constant genital differences. Male (Figs. 5 a, 5 b). Head and body: Upperside of head, base of thorax and tegulae pale brown. Dorsal part of thorax and abdomen greyish-beige, with 11 longitudinal lines of unequal width; median thoracic line dark brown, thin, extending onto all abdominal segments, where it is bordered by a pair of thicker grey-brown lines, only slightly contrasting with the dorsal abdominal ground color. A pair of barely visible, black dots present immediately after these lines at the junction of each abdominal segment. Abdomen laterally with two pairs of alternately pale grey and brown lines; latero-ventrally orange-beige, with a pair of black dots on each segment; ventrally with five longitudinal lines, three cream coloured, interspaced with two pale brown lines. Thorax laterally orange-beige; ventrally pale brown, as are the legs and labial palpi. Forewing upperside: General coloration pale brown and beige. The wing is divided into four distinct areas. Basally pale brown, slightly greyish; costal margin, especially along the discal cell, deep brown. Median area pale beige, its distal part becoming brown when approaching the costa, though less contrasted than the latter. Discal spot round and black. Full complement of six oblique postmedian and two submarginal lines present. First postmedian line brown, arising above the inner margin, a few millimeters from the wing base, straight, clearly defined, curving slightly toward the apex, but not reaching it (unlike the next three). Second postmedian line more diffuse and less contrasted. Third postmedian line almost as dark as the first, whereas the fourth is identical to the second, though thinner. These four lines parallel and evenly spaced. Fifth postmedian line wider and darker than others, followed by a somewhat similar, though narrower, sixth line. Between the fifth and sixth postmedian lines, the wing background color is slightly orange, especially close to the inner margin of the wing. First submarginal line diffuse and poorly defined; second submarginal line evanescent, only clearly visible near tornus. Fifth and sixth postmedian lines and both submarginal lines reach the apex. Hindwing upperside: Basal area dark brown, almost black. Median band wide, beige reaching the apex, with an irregular anterior margin and a smooth, clearly defined, posterior margin; Submarginal band dark brown (though less dark that the basal area) extending from tornus to apex. Forewing underside: Like the upperside, divided in four distinct areas: from base to median area, pale brown to grey-brown; median area orange brown; apical part beige; submarginal part of outer margin grey-brown. Postmedian and submarginal oblique lines, as described for the upperside, are apparent. First postmedian line dark brown, thick basally and narrowing toward costal margin, where it is reduced to a very thin trace. The next three postmedian lines grey-brown, contrasting little with the orange brown colour of this part of the wing; third postmedian line with a large black somewhat triangular spot between veins Rs 3 and Rs 4; fourth postmedian line with a small black vein dot on M 1. Fifth postmedian line also grey-brown but wider that the preceding and bearing a row of distinct black vein dots on M 2 to CuA 2. Sixth postmedian line mostly visible between apex and vein M 3; shortly beyond this vein, it disappears into the orange-beige ground coloration of the wing. First submarginal line clearly visible, almost as contrasted as the first postmedian line; the second submarginal line reduced to a suffusion of brown scales. Hindwing underside: Basally grey-beige, progressively becoming pinkish-orange towards the postmedian area. Median area crossed by two longitudinal pale brown lines, distal of which is an interrupted line with black vein dots. Submarginal band, from tornus to apex, dark brown though paler on the veins and towards the apex. Female and pre-imaginal stages. Unknown. Male genitalia (Figs. 9 a���c). Overall, very similar to the other species of the complex. Uncus (Fig. 9 a) relatively short, with well developed and setose lateral setigerous lobes; posterior third narrowed and downcurved, apex curved and spatulate. Harpe (Fig. 9 b) short, basally very wide, bending and narrowing medially and becoming narrow and thinly upcurved apically; ventral part, especially basally, irregular and setose. Aedeagus (Fig. 9 c), as in most Xylophanes species, with a transverse apical process bearing two distinct lobes; right lobe short, recurved, of even width only tapering at the apex, with about 20 tiny even teeth along its ventral and lateral margins; left lobe poorly developed, reduced to a plate following the left lateral margin of the aedeagus, thinly serrate with only few short scattered teeth from medially to the apex, where the serrations are slightly longer. Distribution: This species is so far only known from Pote in Minas Gerais state, Brazil. It is likely to be restricted to this part of southeastern Brazil, which is known for its high level of endemism. Genetic variation: The COI sequences for the two available specimens are identical., Published as part of Vaglia, Thierry, Haxaire, Jean, Kitching, Ian J., Meusnier, Isabelle & Rougerie, Rodolphe, 2008, Morphology and DNA barcoding reveal three cryptic species within the Xylophanes neoptolemus and loelia species-groups (Lepidoptera: Sphingidae), pp. 18-36 in Zootaxa 1923 on pages 26-28, DOI: 10.5281/zenodo.184748
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- 2008
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20. Xylophanes balcazari Haxaire & Vaglia, n. sp
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Vaglia, Thierry, Haxaire, Jean, Kitching, Ian J., Meusnier, Isabelle, and Rougerie, Rodolphe
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Lepidoptera ,Xylophanes balcazari ,Insecta ,Arthropoda ,Animalia ,Sphingidae ,Biodiversity ,Xylophanes ,Taxonomy - Abstract
Xylophanes balcazari Haxaire & Vaglia n. sp. (Figs. 2 a, 2 b, 11 a���c) Type material: Holotype (Figs. 2 a, 2 b; in coll. JH, to be deposited in CNIN; BC-Hax0759/ SOWA 766 -06): ��, Mexico, Guerrero, road from La Salitrera to Vallecitos de Zaragoza, km. 45, 500 m., 15.viii. 1992, leg. D. Herbin & J. Haxaire. Paratypes (in coll. JH): 7 ���� (5 with DNA Barcodes���BC-Hax0763/ SOWA 770 -06, BC- Hax0764/ SOWA 771 -06, BC-Hax 4325 / SOWE 426 -07, BC-Hax 4326 / SOWE 427 -07, BC-Hax 4327 / SOWE 428 -07), same data as holotype (one male to be deposited in the BMNH); 1 �� Mexico, Michoac��n, road from Villa Victoria to Coalcoman, Los Laureles, 1538 m., 25.vi. 2008, leg. J. Haxaire, O. Paquit & G. Nogueira; 4 ����, Mexico, Michoac��n, Coalcoman, Puerto La Zarzamora, Cerro El Laurel, 1635m., 26.vi. 2008, leg. J. Haxaire, O. Paquit & G. Nogueira; 2 ����, Mexico, Michoac��n, Coalcoman, Puerto La Zarzamora, Cerro El Laurel, 1635 m., 27.vi. 2008, leg. J. Haxaire, O. Paquit & G. Nogueira; 2 ����, Mexico, Michoac��n, Coalcoman, Puerto La Zarzamora, Cerro El Laurel, 1635 m., 8.vii. 2008, leg. J. Haxaire, O. Paquit & G. Nogueira. Description: Male (Figs. 2 a, 2 b). Forewing length: 32 mm. Forewing upperside: General background color olive-beige. Discal spot small and black. Full complement of six oblique postmedian and two submarginal lines present, more or less easily distinguishable depending on specimen condition. First and fifth postmedian lines the most obvious, broader than the others. First postmedian line straight, stopping 2mm from costa, whereas the other lines all curve apically towards the wing apex. Area between first and fifth postmedian lines pale beige, crossed by the thin second, third and fourth postmedian lines; second postmedian line barely distinguishable except in its most apical part; third and fourth postmedian lines bend strongly beyond vein Rs 4, becoming blurred toward the apex of the wing, although they do clearly reach it. The strongly marked fifth postmedian line is slightly sinuous, convex from inner margin to vein M 1 and then slightly concave from there to apex. Between this band and the next, the wing becomes reddish. Fifth and sixth postmedian lines 5 and 6 separate and parallel from about 1mm from the inner margin, but converging toward the apex and fused beyond Rs 4. Submarginal area somewhat greyish, always dark; crossed by the barely visible, parallel first and second submarginal lines. Hindwing upperside: Basal area black, extending along inner margin toward tornus and merging into a dark brown band along the costa. Median area red, reaching neither tornus nor apex. Submarginal band brown, of almost equal width from tornus to apex. Tornal patch greyish, poorly contrasting. Forewing underside: Ground color reddish-yellow, with a thin suffusion of dark grey scales, giving the wing background a granular aspect. Basal area of the forewing grey-beige; first and fourth postmedian lines apparent; the first obvious, the fourth, though thinner, still distinct. Submarginal area pale grey, strongly dentate between M 2 and M 3. Hindwing underside: Basal area whitish, extending along the costa; submarginal area pale gray, running from apex to vein 2 A, where it merges into the basal area. Female and pre-imaginal stages. Unknown. Male genitalia (Figs. 11 a���c). Uncus (Fig. 11 a) relatively short and slightly produced dorsally; setigerous lobes distinct; distally somewhat quadrangular, its apex stout and weakly spatulate. Harpe (Fig. 11 b) narrow, twisted and strongly bent medially; its apex is somewhat laminated and sclerotized, with an uneven internal margin possibly bent on itself or invaginated; internal margin bearing numerous setae with protruding bases, whereas the ventral side is only slightly setose. Right lobe of the apical process of the aedeagus (Fig. 11 c) short and stout, dentate on its internal margin, with only a few, relatively long and unevenly distributed teeth present; left lobe poorly dentate, with very few and barely distinct small teeth. Distribution: This new species is apparently restricted so far to Guerrero and Michoac��n states in Mexico, but is likely also to be present in neighbouring states such as Colima and maybe Jalisco, where very similar and presumably favorable environments exist. It is remarkably isolated from the other Mexican representatives of the X. neoptolemus complex by large desert areas (especially in the Puebla state), and its biotope consists in forested areas with a strong Nearctic influence, clearly contrasting with Neotropical-like forests inhabited by X. cthulhu n. sp. (see below) in southern Mexico. Genetic variation: The COI sequences for six specimens collected at the same locality in Guerrero state are all identical (Fig. 13 group 2). Etymology: This species is dedicated to our colleague, Manuel A. Balc��zar-Lara (University of Colima, Mexico), for his invaluable assistance to JH in his studies of Mexican sphingids., Published as part of Vaglia, Thierry, Haxaire, Jean, Kitching, Ian J., Meusnier, Isabelle & Rougerie, Rodolphe, 2008, Morphology and DNA barcoding reveal three cryptic species within the Xylophanes neoptolemus and loelia species-groups (Lepidoptera: Sphingidae), pp. 18-36 in Zootaxa 1923 on pages 30-31, DOI: 10.5281/zenodo.184748
- Published
- 2008
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21. Xylophanes cthulhu Haxaire & Vaglia, n. sp
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Vaglia, Thierry, Haxaire, Jean, Kitching, Ian J., Meusnier, Isabelle, and Rougerie, Rodolphe
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Lepidoptera ,Insecta ,Arthropoda ,Animalia ,Sphingidae ,Biodiversity ,Xylophanes ,Xylophanes cthulhu ,Taxonomy - Abstract
Xylophanes cthulhu Haxaire & Vaglia n. sp. (Figs. 4 a, 4 b, 12 a���c) Type material: Holotype (Figs. 4 a, 4 b; deposited in coll. JH; BC-Hax 4328 / SOWE 429 -07): ��, Guatemala, Izabal department, track from Chocchoc to Cebol (Cevol), km. 2, Pueblo Cadenas, 76 m., 21.vii. 2004, leg. O. Paquit & J. Haxaire. Paratypes: 2 ����, same data as holotype (BC-Hax 4322 / SOWE 423 -07; BC-Hax 4324 / SOWE 425 -07); 1 �� (BC-Hax 4423 / SOWE 524 -07), Guatemala, Succhitepequez Dept., Reserve Tarrales, 1041 m., 7.v. 2007, leg. M. Lauras & D. Herbin; 1 ��, Guatemala, Baja Verapaz Dept., Reserve Santa Rosa, 1580 m., 23.v. 2007, leg. M. Lauras & D. Herbin; 1 �� (BC-Hax 4329 / SOWE 430 -07), Guatemala, Huehuetenango Dept., Soloma, near Cruz Maltin, Aldea Crinolina, 1900 m., 16.v. 2002, leg. J. Monzon Sierra; 1 �� (BC-Hax 4323 / SOWE 424 -07), Costa Rica, Guanacaste Prov., Area de Conservacion Guanacaste, Sector Pitilla, Estacion Biologica Pitilla, 800m., 4.v. 2005, leg. J. Barbut & A. L��v��que; 1 �� (BC-Hax0765/ SOWA 772 -06), genit. prep. #Hax 171, Mexico, Chiapas State, road from Ococingo to Palenque, track to Salto de Agua, km. 10, 50m., 21.viii. 1992, leg. J. Haxaire & D. Herbin; 1 �� (BC-Hax0768/ SOWA 775 -06), genit. prep. #Hax 169, Mexico, Chiapas State, Municipio Oxchuc, track to Pashtonticja, km. 4, 1600m., 20.viii. 1992, leg. J. Haxaire & D. Herbin; 2 ����, genit. prep. #Hax 168, Mexico, Veracruz State, road from Coatepec-Teocelo to Los Altos, track to Chilchotla, km. 4, 1350m., 3.viii. 1992, leg. J. Haxaire & D. Herbin; 2 ���� (BC-Hax0766/ SOWA 773 - 06; BC-Hax0767/SOWA- 774 -06), Mexico, Veracruz State, road from Coatepec-Teocelo to Los Altos, track to Chilchotla, km. 4, 1350m., 24.viii. 1992, leg. J. Haxaire & D. Herbin; 6 ���� and 1 ��, Mexico, Oaxaca, Sierra Juarez, 12-17.iii. 1992, leg. local collectors; 8 ����, Mexico, Veracruz, Dos Amates, 20.x. 2005, leg. local collectors; 1 ��, Mexico, Veracruz, Catemaco, 06.viii. 2004, leg. local collectors; 1 �� (BC-Hax0770/ SOWA 777 - 06), Nicaragua, Granada, Mombacho Volcano, alt. 800 m., 02.viii. 2000, leg. M. Laguerre; 3 ����, Nicaragua, Nueva Segovia, Rio Mazarite, 10-12.xi. 2000, leg. J.-M. Maes; 1 ��, Panama, Cocl��, Cerro Gaital, El Valle, 27.v. 1994, leg. N. Smith & D. Mitchell; 1 �� (BC-Hax0769/ SOWA 776 -06), Honduras, Yoro, Pijol Mountain, alt. 1500 m., 19.vii. 1995, leg. T. Porion; 2 ����, Panama, Panama Prov., Cerro Jofe, 900-1000m, 9-13.v. 2007, leg. J. Touroult; 1 ��, Panama, Chiriqu��, 1980, leg. Moinier; all the above paratypes held in the collections of JH and TV, except 2 ���� to be deposited in the CNIN and BMNH. In addition, 11 paratypes (6 ����, 5 ����) are designated from Costa Rica, Area de Conservacion Guanacaste: 1 ��, Sector Cacao, Gongora Bananal, alt. 600 m., 05.viii. 2004, leg. M. Pereira; 1 ��, Sector Pitilla, Ingas, alt. 580 m., 29.i. 2005, leg. M. Rios; 2 ���� and 2 ����, Sector Pitilla, Loaiciga, alt. 445 m., 10-26.i. 2005, leg. M. Rios; 2 ���� and 2 ����, Sector Pitilla, Pasmonpa, alt. 440 m., 10-29.i. 2005, leg. P. & M. Rios; 1 ��, Rincon Rainforest, Camino Rio Francia, alt. 410 m., 16.viii. 2004, leg. J.Perez. All of these 11 specimens are part of the dataset used in the DNA barcoding study by Hajibabaei et al. (2006); these specimens to be deposited in the Smithsonian Institution, Washington DC, USA, and specimen data as well as sequences are available from the public BOLD project ��� Sphingidae of the ACG 1 ��� (code MHASA) or GenBank (accession numbers DQ 276772 to DQ 276782). Description: This species is immediately distinguishable by its bright coloration and the acute and falcate apex of the forewings. It is widely distributed in Central America and was recorded as X. neoptolemus by Mooser (1940: 456) and Hoffmann (1943: 233) in their surveys of Mexican sphingids. Male (Figs. 4 a, 4 b). Head and body: Dorsal part of body olive-brown; labial palpi, area above eyes and tegulae finely marked with grey. Tegula with a median longitudinal gold line. median dorsal area of thorax greyish-beige, contrasting with patagia and tegulae. Upperside of abdomen with five thin longitudinal dark beige lines. Forewing length: 35 mm. Forewing upperside: General background color olive-brown; crossed by six postmedian and two submarginal lines as in the previously described species. First and fifth postmedian lines the most heavily contrasted, delimiting between them a cream-colored band in the median area of the wing. General coloration beyond fifth postmedian line remains constant, submarginal area not strongly differentiated from this postmedian part; this region crossed by three even lines (sixth postmedian and the two submarginal). Apex acute, slightly to strongly falcate, especially in specimens from Veracruz State, Mexico. Hindwing upperside: Basal area pure black, extending toward tornus, where it turns pale grey with a white inner edge. Median band bright red, somewhat pinkish in fresher specimens; tapering progressively toward apex of wing, almost reaching it. Forewing and hindwing undersides: Contrasted but with few distinct markings; ground colour reddish yellow, of uniform aspect. Basal area of forewing grey-beige; first and fourth postmedian lines apparent, first straight and strongly marked, fourth very narrow and only visible from inner edge to vein M 2, beyond which it is replaced by small black vein dots. Between these two lines, the wing is golden-yellow, contrasting with the reddish tone of the rest of the wing; orange submarginal area dentate between M 2 and M 3 in most specimens. First submarginal line also usually apparent, running from the inner margin to the apex. Female. Forewing length: 37mm. Identical to the males in terms of general wing pattern and color, both upperside and underside, differing only in the normal differences between sexes in the genus Xylophanes, i.e. larger wingspan, broader and more rounded wings, and thinner antennae. Male genitalia (Figs. 12 a���c). Uncus stout; setigerous lobes developed and distinctly protruding; distal projection bent ventrally, its apex is slightly spatulate and truncate. Harpe short, thick basally and tapering progressively into a thin and slightly upcurved apex. The latter, together with the internal margin of the harpe, only slightly sclerotized. Setae on the harpe few, scattered, and present mostly on the ventral side. Right lobe of apical process of the aedeagus very stout, with long and uneven teeth grouped in the apical portion of its internal margin; left lobe barely distinct, bearing about 10 minute teeth on its lateral part. Immature stages: A large number of rearing records for this species are reported on the ACG caterpillar inventory website (http://janzen.sas.upenn.edu/); when writing this article, more than 100 pictures of the caterpillar (penultimate and ultimate instars) and pupae of Xylophanes cthulhu were displayed on this site along with detailed collecting information, including food plant identifications. X. cthulhu is reported to feed exclusively on Rubiaceae of the genus Spermacoce L. (52 records on S. exilis, 6 on S. ocymifolia and 1 on S. remota). Parasitoids: From the numerous rearing records of X. cthulhu in ACG, this species is reported as the host of the parasitoid wasps, Cryptophion inaequalipes (Hymenoptera: Ichneumonidae, Campopleginae. The reported parasitoid actually represents a species complex and a provisional name, C. inaequalipes DHJ02, is currently attached to the specimens reared out of X. cthulhu caterpillars) and Charmedia chavarriai (Ichneumonidae, Ichneumoninae), as well as the tachinid fly, Drino incompta (Diptera: Tachinidae). Distribution. This species is widely distributed in Central America, inhabiting low to medium altitude forest areas from southern Mexico (Veracruz, Chiapas and Oaxaca states) to eastern Panama (Panama province). A possible contact zone with X. neoptolemus should be searched for in northern Colombia, where specimens of both species might be encountered. Genetic variation: The lack of genetic variation of this species is remarkable, with a single haplotype found throughout the range from Mexico (Chiapas) to Panama (Fig. 13, group 3)., Published as part of Vaglia, Thierry, Haxaire, Jean, Kitching, Ian J., Meusnier, Isabelle & Rougerie, Rodolphe, 2008, Morphology and DNA barcoding reveal three cryptic species within the Xylophanes neoptolemus and loelia species-groups (Lepidoptera: Sphingidae), pp. 18-36 in Zootaxa 1923 on pages 31-34, DOI: 10.5281/zenodo.184748, {"references":["Hajibabaei, M., Janzen, D. H., Burns, J. M., Hallwachs, W. & Hebert, P. D. N. (2006) DNA barcodes distinguish species of tropical Lepidoptera. Proceedings of the National Academy of Science USA, 103, 968 - 971."]}
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- 2008
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22. Xylophanes neoptolemus Cramer 1780
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Vaglia, Thierry, Haxaire, Jean, Kitching, Ian J., Meusnier, Isabelle, and Rougerie, Rodolphe
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Lepidoptera ,Insecta ,Arthropoda ,Animalia ,Sphingidae ,Biodiversity ,Xylophanes ,Taxonomy ,Xylophanes neoptolemus - Abstract
Xylophanes neoptolemus (Cramer, 1780) (Figs. 3 a, 3 b, 10 a���c) Chaerocampa trilineata (Walker, [1865]) Chaerocampa brasiliensis Schaufuss, 1870 Xylophanes trinitatis Closs, 1917 Taxonomic Notes: As noted above, we failed to locate any type material for Sphinx neoptolemus in any of the major European museums that might have been expected to house it. Furthermore, the quality of the original painting is insufficient to determine the species that Cramer had before him. Although there is no taxonomic problem per se regarding Sphinx neoptolemus itself in ��� Suriname ��� (even if this term is used in its broader Eighteenth Century interpretation, which could include the West Indies), it may not represent the taxon we treat here as Xylophanes neoptolemus but another species of Xylophanes altogether. Thus, we do not consider the painting to be useful as a representation of the type of Sphinx neoptolemus, although it is essentially consistent with our concept of this species. Therefore, with the express purpose of clarifying the taxonomic status of Sphinx neoptolemus and fixing the type locality, we hereby designate the following specimen as neotype (Figs. 3 a, 3 b; in coll. JH, to be deposited in the BMNH, BC-Hax 4339 / SOWE 440 -07): ��, Venezuela, Aragua State, Maracay, station Rancho Grande, 30-31.viii. 1983, leg. J. Haxaire & J.-Y. Rasplus. No specimens were available to us from Surinam and so we chose one from a locality that was as close as was practicable. Diagnostic features separating Xylophanes neoptolemus from its closest relatives, X. balcazari n. sp. and X. cthulhu n. sp., are given below in the descriptions of those two species and in the identification key. Chaerocampa trilineata (Fig. 1 a) was described from two specimens from ��� Venezuela ��� from the Dyson collection. In the original description, Walker ([1865]: 30) indicated that he had only males. However, we have located both specimens in the BMNH and found that one of the syntypes is actually a female. To stabilize the nomenclature, we hereby designate the male specimen (BMNH (E)# 274441) as the lectotype. The lectotype and its original labels are illustrated in Fig. 1 a. The pale blue-edged syntype label will be replaced with a purple-edged lectotype label. In addition to a pale blue-edged syntype label (which will be replaced with a pale blue-edged paralectotype label), circular locality label and a printed specimen register number label, the paralectotype female (BMNH (E)# 274442) has a hand-written label stating ��� trilineata Wlk. ��� and a label comprising the words ���CHAEROCAMPA TRILINEATA.��� cut from a copy of Walker���s catalogue. As noted above, we have been unable both to locate the holotype of C. brasiliensis and to determine the identity of the taxon. Therefore, we maintain C. brasiliensis as a synonym of X. neoptolemus pending discovery of type material. Xylophanes trinitatis was described from a holotype male from Trinidad, deposited in the ZSM. We have examined a color photograph of the holotype and this, together with the type locality, confirms its synonymy with X. neoptolemus. Distribution: Following the neotype designation above, our specimens from Venezuela and French Guiana represent Xylophanes neoptolemus (Fig. 13, group 1). Furthermore, our biogeographic results support the previous treatments of X. trilineata and X. trinitatis as junior subjective synonyms of X. neoptolemus. X. neoptolemus occurs in the lowland tropical rain forest of the northern part of South America. We know it from western Venezuela to French Guiana. In the latter country, it is only frequent in the so-called ���zone 1 ��� region of St-Laurent and St-Jean-du-Maroni (Haxaire 1987), near the Surinam border. This moth becomes far less abundant southward. The furthest south it has been recorded is from the Jari Celulose S.A. landholding (Hawes 2005), between the Jari and Paru rivers, northwest of Monte Dourado in Par�� state, Brazil, but it may not cross the Amazon river as it is not mentioned by Moss (1920) in his work on the sphingids of Bel��m. Genetic variation: There is some diversity in the barcode region (Fig. 13, group 1) but intraspecific divergence is low, with the five different haplotypes differing from each other by only a single base pair., Published as part of Vaglia, Thierry, Haxaire, Jean, Kitching, Ian J., Meusnier, Isabelle & Rougerie, Rodolphe, 2008, Morphology and DNA barcoding reveal three cryptic species within the Xylophanes neoptolemus and loelia species-groups (Lepidoptera: Sphingidae), pp. 18-36 in Zootaxa 1923 on pages 28-30, DOI: 10.5281/zenodo.184748, {"references":["Cramer, P. (1780) Uitlandsche Kapellen, voorkomende in de drie Waereld-Deelen Asia, Africa en America, by een verzameld en bescreeven. Barthelemy Wild, S. J. Baalde, Utrecht, 1 - 28, plates 289 - 304.","Walker, F. ([1865]) Supplement. List of the Specimens of Lepidopterous Insects in the Collection of the British Museum, 31, 1 - 321.","Schaufuss, L. W. (1870) Die exotischen Lepidoptera Heterocera der Fruher Kaden'schen Sammlung. Nunquam Otiosus, 1, 7 - 23.","Closs, A. (1917) Xylophanes neoptolemus Stoll, subspec. neoptolemus trinitatis subspec. nov. Internationale Entomologische Zeitschrift, 11, 96.","Haxaire, J. (1987) Le genre Xylophanes Hubner (1819) en Guyane Francaise. Quelques complements (Lepidoptera Sphingidae). Bulletin de la Societe Sciences Nat. 55, 12 - 19.","Hawes, J. (2005) Impacts of landscape level disturbance on Amazonian moth assemblages. MSc. thesis, University of East Anglia, Norwich, U. K. 45 pp."]}
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- 2008
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23. Xylophanes loelia Druce 1878
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Vaglia, Thierry, Haxaire, Jean, Kitching, Ian J., Meusnier, Isabelle, and Rougerie, Rodolphe
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Lepidoptera ,Insecta ,Arthropoda ,Animalia ,Xylophanes loelia ,Sphingidae ,Biodiversity ,Xylophanes ,Taxonomy - Abstract
Xylophanes loelia (Druce, 1878) (Figs. 6 a, 6 b, 8 a���c) Xylophanes heinrichi Closs, 1917 Taxonomic Notes: Xylophanes heinrichi (Fig. 7 a) was described by Closs (1917) from a single male collected by E. Christeller on 11.???. 1912 (the month is unclear on the label) from ���Amazonas���. This is an imprecise type locality, as it could refer to parts of Brazil, Venezuela, Colombia and even Peru. Of these, Brazil is perhaps somewhat more likely than the others but this is still not at all certain. However, regardless of where in ���Amazonas��� the moth was captured, the locality would be within the distribution of what we infer here to be X. loelia. The holotype, preserved in the ZSM, is illustrated in Fig. 7 a. X. heinrichi is currently treated as a junior subjective synonym of Xylophanes loelia. Choerocampa loelia was described by Druce (1878) from an unstated number of specimens from Chiriqu��, Panama, collected by Arc��. Only a single specimen with appropriate data and labels has been found in the BMNH and thus to stabilize the nomenclature, we hereby designate this specimen as the lectotype. The lectotype and its labels are illustrated in Figs 6 a and 6 b. Distribution: This species is widely distributed in Central and South America. It is known to us from southern Brazil and Paraguay, north through Peru, Ecuador, French Guiana, Guyana, Venezuela, Trinidad and Colombia, and into Central America, through Costa Rica and Nicaragua, to Belize. Genetic variation: Intraspecific variation for the part of COI we sequenced is very low (Table 2; Fig. 13, clade # 2)., Published as part of Vaglia, Thierry, Haxaire, Jean, Kitching, Ian J., Meusnier, Isabelle & Rougerie, Rodolphe, 2008, Morphology and DNA barcoding reveal three cryptic species within the Xylophanes neoptolemus and loelia species-groups (Lepidoptera: Sphingidae), pp. 18-36 in Zootaxa 1923 on page 26, DOI: 10.5281/zenodo.184748, {"references":["Druce, H. (1878) Description of six new species of Sphingidae. Entomologist's Monthly Magazine, 14, 248 - 249.","Closs, A. (1917) Xylophanes neoptolemus Stoll, subspec. neoptolemus trinitatis subspec. nov. Internationale Entomologische Zeitschrift, 11, 96."]}
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- 2008
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24. Pathogen effectors and plant immunity determine specialization of the blast fungus to rice subspecies.
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Jingjing Liao, Huichuan Huang, Meusnier, Isabelle, Adreit, Henri, Ducasse, Aurélie, Bonnot, François, Lei Pan, Xiahong He, Kroj, Thomas, Fournier, Elisabeth, Tharreau, Didier, Gladieux, Pierre, and Morel, Jean-Benoit
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- 2016
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25. A DNA barcode for land plants
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Hollingsworth, Peter M., Forrest, Laura L., Spouge, John L., Hajibabaei, Mehrdad, Ratnasingham, Sujeevan, van der Bank, Michelle, Chase, Mark W., Cowan, Robyn S., Erickson, David L., Fazekas, Aron J., Graham, Sean W., James, Karen E., Kim, Ki-Joong, John Kress, W., Schneider, Harald, van Alphen Stahl, Jonathan, Barrett, Spencer C. H., van der Berg, Cassio, Bogarin, Diego, Burgess, Kevin S., Cameron, Kenneth M., Carine, Mark, Chacón, Juliana, Clark, Alexandra, Clarkson, James L., Conrad, Ferozah, Devey, Dion S., Ford, Caroline S., Hedderson, Terry A. J., Hollingsworth, Michelle L., Husband, Brian C., Kelly, Laura J., Kesanakurti, Prasad R., Kim, Jung Sung, Kim, Young-Dong, Lahaye, Renaud, Kim, Hae-Lim, Long, David G., Madriñán, Santiago, Maurin, Oliver, Meusnier, Isabelle, Newmaster, Steven G., Park, Chong-Wook, Percy, Diana M., Petersen, Gitte, Richardson, James E., Salazar, Gerardo A., Savolainen, Vincent, Seberg, Ole, Wilkinson, Michael J., Yi, Dong-Keu, Little, Damon P., Hollingsworth, Peter M., Forrest, Laura L., Spouge, John L., Hajibabaei, Mehrdad, Ratnasingham, Sujeevan, van der Bank, Michelle, Chase, Mark W., Cowan, Robyn S., Erickson, David L., Fazekas, Aron J., Graham, Sean W., James, Karen E., Kim, Ki-Joong, John Kress, W., Schneider, Harald, van Alphen Stahl, Jonathan, Barrett, Spencer C. H., van der Berg, Cassio, Bogarin, Diego, Burgess, Kevin S., Cameron, Kenneth M., Carine, Mark, Chacón, Juliana, Clark, Alexandra, Clarkson, James L., Conrad, Ferozah, Devey, Dion S., Ford, Caroline S., Hedderson, Terry A. J., Hollingsworth, Michelle L., Husband, Brian C., Kelly, Laura J., Kesanakurti, Prasad R., Kim, Jung Sung, Kim, Young-Dong, Lahaye, Renaud, Kim, Hae-Lim, Long, David G., Madriñán, Santiago, Maurin, Oliver, Meusnier, Isabelle, Newmaster, Steven G., Park, Chong-Wook, Percy, Diana M., Petersen, Gitte, Richardson, James E., Salazar, Gerardo A., Savolainen, Vincent, Seberg, Ole, Wilkinson, Michael J., Yi, Dong-Keu, and Little, Damon P.
- Abstract
Udgivelsesdato: 2009
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- 2009
26. A universal DNA mini-barcode for biodiversity analysis
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Meusnier, Isabelle, Singer, Gregory AC, Landry, Jean-François, Hickey, Donal A., Hebert, Paul DN, Hajibabaei, Mehrdad, Meusnier, Isabelle, Singer, Gregory AC, Landry, Jean-François, Hickey, Donal A., Hebert, Paul DN, and Hajibabaei, Mehrdad
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The goal of DNA barcoding is to develop a species-specific sequence library for all eukaryotes. A 650 bp fragment of the cytochrome c oxidase 1 (CO1) gene has been used successfully for species-level identification in several animal groups. It may be difficult in practice, however, to retrieve a 650 bp fragment from archival specimens, (because of DNA degradation) or from environmental samples (where universal primers are needed).
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- 2008
27. Molecular identification ofEpitrixpotato flea beetles (Coleoptera: Chrysomelidae) in Europe and North America
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Germain, Jean-François, primary, Chatot, Catherine, additional, Meusnier, Isabelle, additional, Artige, Emmanuelle, additional, Rasplus, Jean-Yves, additional, and Cruaud, Astrid, additional
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- 2013
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28. Morphology and DNA barcoding reveal three cryptic species within the Xylophanes neoptolemus and loelia species-groups (Lepidoptera: Sphingidae)
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VAGLIA, THIERRY, primary, HAXAIRE, JEAN, additional, KITCHING, IAN J., additional, MEUSNIER, ISABELLE, additional, and ROUGERIE, RODOLPHE, additional
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- 2008
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29. A universal DNA mini-barcode for biodiversity analysis
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Meusnier, Isabelle, primary, Singer, Gregory AC, additional, Landry, Jean-François, additional, Hickey, Donal A, additional, Hebert, Paul DN, additional, and Hajibabaei, Mehrdad, additional
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- 2008
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30. Analysis of rDNA ITS1 indels inCaulerpa taxifolia(Chlorophyta) supports a derived, incipient species status for the invasive strain
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Meusnier, Isabelle, primary, Valero, Myriam, additional, Olsen, Jeanine L, additional, and Stam, Wytze T, additional
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- 2004
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31. MEDITERRANEAN CAULERPA TAXIFOLIA AND C. MEXICANA (CHLOROPHYTA) ARE NOT CONSPECIFIC
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Olsen, Jeanine L., primary, Valero, Myriam, additional, Meusnier, Isabelle, additional, Boele‐Bos, Stella, additional, and Stam, Wytze T., additional
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- 1998
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32. Molecular identification of Epitrix potato flea beetles (Coleoptera: Chrysomelidae) in Europe and North America.
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Germain, Jean-François, Chatot, Catherine, Meusnier, Isabelle, Artige, Emmanuelle, Rasplus, Jean-Yves, and Cruaud, Astrid
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FLEA beetles ,POTATO diseases & pests ,CYTOCHROME oxidase ,GENETIC markers ,POLYMERASE chain reaction - Abstract
Epitrix species (Coleoptera: Chrysomelidae) feed mostly on plants from the family Solanaceae and some of them are major pests of potato crops. All Epitrix species are morphologically highly similar, which makes them difficult to identify and limits their study and management. Identification of species is mostly based on the observation of the genitalia and requires a high level of expertise. Here, we propose a tool to reliably identify all developmental stages of the most economically important Epitrix species feeding on potato in Europe and North America (Epitrix cucumeris, Epitrix similaris, Epitrix tuberis, Epitrix subcrinita and Epitrix hirtipennis). We first sequenced two DNA markers (mitochondrial cytochrome c oxidase I (COI) and nuclear internal transcribed spacer 2 (ITS2)) to test their effectiveness in differentiating among six Epitrix species (126 specimens). Morphospecies of Epitrix were well-differentiated by both DNA barcodes and no mitochondrial introgression was detected. Then, we developed an RFLP-based diagnostic method and showed that unambiguous species discrimination can be achieved by using the sole restriction enzyme TaqI on COI polymerase chain reaction products. The tool proposed here should improve our knowledge about Epitrix species biology, distribution and host range, three capacities that are particularly important in the detection and management of these pest species. Specifically, this tool should help prevent the introduction of E. tuberis and E. subcrinita in Europe and limit the spread of the recently introduced E. cucumeris and E. similaris, with minimal disruption to Solanaceae trade. [ABSTRACT FROM PUBLISHER]
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- 2013
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33. Analysis of rDNA ITS1 indels in Caulerpa taxifolia (Chlorophyta) supports a derived, incipient species status for the invasive strain.
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Meusnier, Isabelle, Valero, Myriam, Olsen, Jeanine L, and Stam, Wytze T
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DNA , *RIBOSOMES , *CAULERPA taxifolia , *GREEN algae , *NUCLEOTIDE sequence - Abstract
We analysed insertion-deletion patterns in 159 published sequences of ITS1 for Caulerpa taxifolia (Vahl) C. Agardh collected from 55 localities throughout the species' range. Five indelotypes (I) were identified that represented a sequential loss of insertions from the ancestral type (I 3 ) to the most derived type (I 0 ). The I 3 consists of the complete ITS1 sequence, which is also characteristic of three outgroup species. In contrast, the I 0 has lost three inserts from the complete sequence and is associated with the invasive forms found in the Mediterranean, California and southeastern Australia. The I 2 was found in samples from the Red Sea and Jakarta, whereas the I 1 was associated with samples from Australia and New Caledonia. When mapped onto location and habitat, these ordered character-states reveal a widespread distribution of I 3 and (probably) I 2 , which are associated with offshore coral reefs and clear oligotrophic waters. The I 1 and I 0 comprise a paraphyletic assemblage of the more derived types harbouring two or three deletions and occurring together along mainland Australian coasts in more turbid environments. The presence of I 0 , I 1a and I 1b along the Australian coast indicates that the ecological transition that gave rise to the coastal ecotype has been present at least since the time of the mutation between I 2 and I 1 . These types of fixed differences confirm that C. taxifolia consists of at least two incipient species--the coastal form being an offshoot derived from the clear-water ecotypes. The finding of indelotype I 1a in an isolate from Sousse (Tunisia) confirms a second Mediterranean introduction and highlights the urgency for further research in the evolutionary diversification of one of the most intriguing and troublesome seaweeds. [ABSTRACT FROM AUTHOR]
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- 2004
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34. REPLY TO COMMENT BY CHISHOLM AND JAUBERT.
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Olsen, Jeanine L., Valero, Myriam, Meusnier, Isabelle, Boele-Bos, Stella, and Stam, Wytze T.
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CAULERPA ,CAULERPA taxifolia ,PHYCOLOGY - Abstract
Responds to comments about the finding that Caulerpa mexicana and C. taxifolia are not conspecific, that is, not ecological variants of a single species. Argument that ITS is not a good marker for the study of genetic variability within C. taxifolia; Agreement to the suggestion to try and sequence the ITS from the Rayss herbarium specimens, particularly the putative C. taxifolia.
- Published
- 1999
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