160 results on '"Merkel O"'
Search Results
2. PDGFRβ promotes oncogenic progression via STAT3/STAT5 hyperactivation in anaplastic large cell lymphoma
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Garces de los Fayos Alonso, I., Zujo, L., Wiest, I., Kodajova, P., Timelthaler, G., Edtmayer, S., Zrimšek, M., Kollmann, S., Giordano, C., Kothmayer, M., Neubauer, H. A., Dey, S., Schlederer, M., Schmalzbauer, B. S., Limberger, T., Probst, C., Pusch, O., Högler, S., Tangermann, S., Merkel, O., Schiefer, A. I., Kornauth, C., Prutsch, N., Zimmerman, M., Abraham, B., Anagnostopoulos, J., Quintanilla-Martinez, L., Mathas, S., Wolf, P., Stoiber, D., Staber, P. B., Egger, G., Klapper, W., Woessmann, W., Look, T. A., Gunning, P., Turner, S. D., Moriggl, R., Lagger, S., and Kenner, L.
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- 2022
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3. Shaping the future from the small scale: dry powder inhalation of CRISPR-Cas9 lipid nanoparticles for the treatment of lung diseases
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Carneiro, S, Greco, A, Chiesa, E, Genta, I, Merkel, O, Carneiro, SP, Merkel, OM, Carneiro, S, Greco, A, Chiesa, E, Genta, I, Merkel, O, Carneiro, SP, and Merkel, OM
- Abstract
Introduction: Most lung diseases are serious conditions resulting from genetic and environmental causes associated with high mortality and severe symptoms. Currently, treatments available have a palliative effect and many targets are still considered undruggable. Gene therapy stands as an attractive approach to offering innovative therapeutic solutions. CRISPRCas9 has established a remarkable potential for genome editing with high selectivity to targeted mutations. To ensure high efficacy with minimum systemic exposure, the delivery and administration route are key components that must be investigated. Areas covered: This review is focused on the delivery of CRISPRCas9 to the lungs, taking advantage of lipid nanoparticles (LNPs), the most clinically advanced nucleic acid carriers. We also aim to highlight the benefits of pulmonary administration as a local delivery route and the use of spray drying to prepare stable nucleic-acid-based dry powder formulations that can overcome multiple lung barriers. Expert opinion: Exploring the pulmonary administration to deliver CRISPRCas9 loaded in LNPs as a dry powder increases the chances to achieve high efficacy and reduced adverse effects. CRISPRCas9 loaded in LNP-embedded microparticles has not yet been reported in the literature but has the potential to reach and accumulate in target cells in the lung, thus, enhancing overall efficacy and safety.
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- 2023
4. Combining fluorescence correlation spectroscopy and lifetime imaging to study the dynamics of drug delivery nanoparticles in mucus
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Gialdini, I, Gabold, B, Greco, A, Conte, G, Wang, X, Merkel, O, Lamb, D, Lamb, DC, Gialdini, I, Gabold, B, Greco, A, Conte, G, Wang, X, Merkel, O, Lamb, D, and Lamb, DC
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- 2023
5. Tackling breast cancer chemoresistance with nano-formulated siRNA
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Jones, S K and Merkel, O M
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- 2016
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6. Thoracic surgery contribution to the establishment of novel human ex-vivo lung disease models
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Stoleriu, M-G, additional, Gerckens, M, additional, Koch, I, additional, Steinhart, D, additional, Damirov, F, additional, Samm, N, additional, Kovács, J, additional, Zimmermann, J, additional, Yavuz, G, additional, Ketscher, C, additional, Porras-Gonzales, D, additional, Wei, X, additional, Merkel, O, additional, Michler, T, additional, Hilgendorff, A, additional, Schiller, H, additional, Burgstaller, G, additional, Stacher-Priehse, E, additional, Grützner, U, additional, and Hatz, R, additional
- Published
- 2022
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7. STAT3 and TP53 mutations associate with poor prognosis in anaplastic large cell lymphoma
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Lobello, C, Tichy, B, Bystry, V, Radova, L, Filip, D, Mraz, M, Montes-Mojarro, I, Prokoph, N, Larose, H, Liang, H, Sharma, G, Mologni, L, Belada, D, Kamaradova, K, Fend, F, Gambacorti Passerini, C, Merkel, O, Turner, S, Janikova, A, Pospisilova, S, Lobello C., Tichy B., Bystry V., Radova L., Filip D., Mraz M., Montes-Mojarro I. -A., Prokoph N., Larose H., Liang H. -C., Sharma G. G., Mologni L., Belada D., Kamaradova K., Fend F., Gambacorti Passerini C., Merkel O., Turner S. D., Janikova A., Pospisilova S., Lobello, C, Tichy, B, Bystry, V, Radova, L, Filip, D, Mraz, M, Montes-Mojarro, I, Prokoph, N, Larose, H, Liang, H, Sharma, G, Mologni, L, Belada, D, Kamaradova, K, Fend, F, Gambacorti Passerini, C, Merkel, O, Turner, S, Janikova, A, Pospisilova, S, Lobello C., Tichy B., Bystry V., Radova L., Filip D., Mraz M., Montes-Mojarro I. -A., Prokoph N., Larose H., Liang H. -C., Sharma G. G., Mologni L., Belada D., Kamaradova K., Fend F., Gambacorti Passerini C., Merkel O., Turner S. D., Janikova A., and Pospisilova S.
- Published
- 2021
8. IL10RA modulates crizotinib sensitivity in NPM1-ALK+ anaplastic large cell lymphoma
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Prokoph, N, Probst, N, Lee, L, Monahan, J, Matthews, J, Liang, H, Bahnsen, K, Montes-Mojarro, I, Karaca-Atabay, E, Sharma, G, Malik, V, Larose, H, Forde, S, Ducray, S, Lobello, C, Wang, Q, Luan, S, Pospisilova, S, Gambacorti Passerini, C, Burke, G, Pervez, S, Attarbaschi, A, Janikova, A, Pacquement, H, Landman-Parker, J, Lambilliotte, A, Schleiermacher, G, Klapper, W, Jauch, R, Woessmann, W, Vassal, G, Kenner, L, Merkel, O, Mologni, L, Chiarle, R, Brugieres, L, Geoerger, B, Barbieri, I, Turner, S, Prokoph N., Probst N. A., Lee L. C., Monahan J. M., Matthews J. D., Liang H. -C., Bahnsen K., Montes-Mojarro I. A., Karaca-Atabay E., Sharma G. G., Malik V., Larose H., Forde S. D., Ducray S. P., Lobello C., Wang Q., Luan S. -L., Pospisilova S., Gambacorti Passerini C., Burke G. A. A., Pervez S., Attarbaschi A., Janikova A., Pacquement H., Landman-Parker J., Lambilliotte A., Schleiermacher G., Klapper W., Jauch R., Woessmann W., Vassal G., Kenner L., Merkel O., Mologni L., Chiarle R., Brugieres L., Geoerger B., Barbieri I., Turner S. D., Prokoph, N, Probst, N, Lee, L, Monahan, J, Matthews, J, Liang, H, Bahnsen, K, Montes-Mojarro, I, Karaca-Atabay, E, Sharma, G, Malik, V, Larose, H, Forde, S, Ducray, S, Lobello, C, Wang, Q, Luan, S, Pospisilova, S, Gambacorti Passerini, C, Burke, G, Pervez, S, Attarbaschi, A, Janikova, A, Pacquement, H, Landman-Parker, J, Lambilliotte, A, Schleiermacher, G, Klapper, W, Jauch, R, Woessmann, W, Vassal, G, Kenner, L, Merkel, O, Mologni, L, Chiarle, R, Brugieres, L, Geoerger, B, Barbieri, I, Turner, S, Prokoph N., Probst N. A., Lee L. C., Monahan J. M., Matthews J. D., Liang H. -C., Bahnsen K., Montes-Mojarro I. A., Karaca-Atabay E., Sharma G. G., Malik V., Larose H., Forde S. D., Ducray S. P., Lobello C., Wang Q., Luan S. -L., Pospisilova S., Gambacorti Passerini C., Burke G. A. A., Pervez S., Attarbaschi A., Janikova A., Pacquement H., Landman-Parker J., Lambilliotte A., Schleiermacher G., Klapper W., Jauch R., Woessmann W., Vassal G., Kenner L., Merkel O., Mologni L., Chiarle R., Brugieres L., Geoerger B., Barbieri I., and Turner S. D.
- Abstract
Anaplastic large cell lymphoma (ALCL) is a T-cell malignancy predominantly driven by a hyperactive anaplastic lymphoma kinase (ALK) fusion protein. ALK inhibitors, such as crizotinib, provide alternatives to standard chemotherapy with reduced toxicity and side effects. Children with lymphomas driven by nucleophosmin 1 (NPM1)-ALK fusion proteins achieved an objective response rate to ALK inhibition therapy of 54% to 90% in clinical trials; however, a subset of patients progressed within the first 3 months of treatment. The mechanism for the development of ALK inhibitor resistance is unknown. Through genome-wide clustered regularly interspaced short palindromic repeats (CRISPR) activation and knockout screens in ALCL cell lines, combined with RNA sequencing data derived from ALK inhibitor-relapsed patient tumors, we show that resistance to ALK inhibition by crizotinib in ALCL can be driven by aberrant upregulation of interleukin 10 receptor subunit alpha (IL10RA). Elevated IL10RA expression rewires the STAT3 signaling pathway, bypassing otherwise critical phosphorylation by NPM1-ALK. IL-10RA expression does not correlate with response to standard chemotherapy in pediatric patients, suggesting that a combination of crizotinib and chemotherapy could prevent ALK inhibitor resistance-specific relapse.
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- 2020
9. p53-dependent non-coding RNA networks in chronic lymphocytic leukemia
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Blume, C J, Hotz-Wagenblatt, A, Hüllein, J, Sellner, L, Jethwa, A, Stolz, T, Slabicki, M, Lee, K, Sharathchandra, A, Benner, A, Dietrich, S, Oakes, C C, Dreger, P, te Raa, D, Kater, A P, Jauch, A, Merkel, O, Oren, M, Hielscher, T, and Zenz, T
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- 2015
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10. Anaplastic large cell lymphoma-propagating cells are detectable by side population analysis and possess an expression profile reflective of a primitive origin
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Moti, N, Malcolm, T, Hamoudi, R, Mian, S, Garland, G, Hook, C E, Burke, G A A, Wasik, M A, Merkel, O, Kenner, L, Laurenti, E, Dick, J E, and Turner, S D
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- 2015
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11. What Do We Do with Chronic Lymphocytic Leukemia with 17p Deletion?
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Sellner, L., Denzinger, S., Dietrich, S., Glimm, H., Merkel, O., Dreger, P., and Zenz, T.
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- 2013
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12. Actinomycin D induces p53-independent cell death and prolongs survival in high-risk chronic lymphocytic leukemia
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Merkel, O, Wacht, N, Sifft, E, Melchardt, T, Hamacher, F, Kocher, T, Denk, U, Hofbauer, J P, Egle, A, Scheideler, M, Schlederer, M, Steurer, M, Kenner, L, and Greil, R
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- 2012
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13. Semifluorinated alkanes as a liquid drug carrier system for topical ocular drug delivery
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Dutescu, R. M., Panfil, C., Merkel, O. M., and Schrage, N.
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- 2014
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14. Anaplastic large cell lymphoma stem cells possess a gene expression profile reflective of an early thymic progenitor pointing to a primitive cell of origin: 30
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Moti, N, Malcolm, T, Hook, C E, Hamoudi, R, Amos Burke, G A, Wasik, M, Merkel, O, Laurenti, E, Dick, J E, and Turner, S D
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- 2012
15. Anaplastic large cell lymphoma: the current state of play from a European prospective as presented at the second annual meeting of the European Research Initiative on ALCL, 27-28 June 2011
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Merkel, O, Kenner, L, and Turner, SD
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- 2011
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16. Role of miRNAs in ALK+ and ALK- anaplastic large cell lymphoma: V699
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Hamacher, F., Laimer, D., Scheideler, M., Trajanoski, Z., Egger, G., Kenner, L., Greil, R., and Merkel, O.
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- 2010
17. Targeting Pim-2, a novel survival protein of myeloma cells, kills malignant plasma cells: V623
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Jöhrer, K., Obkircher, M., Neureiter, D., Parteli, J., Hamacher, F., Merkel, O., Wacht, N., Zidorn, C., Scheideler, M., and Greil, R.
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- 2010
18. Antiapoptotic effects of p21 in arsenic trioxide induced apoptosis in CLL: V615
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Sifft, E., Asslaber, D., Schweiggl, S., Hamacher, F., Greil, R., and Merkel, O.
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- 2010
19. miRNAs in NPM-ALK Lymphomas: Role of JunB/c-Jun: V829
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Merkel, O., Laimer, D., Hamacher, F., Scheideler, M., Trajanoski, Z., Greil, R., and Kenner, L.
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- 2009
20. MicroRNA-34a expression correlates with MDM2 SNP-309 polymorphism and treatment-free survival in chronic lymphocytic leukemia: V824
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Asslaber, D., Pinon, J. D., Seyfried, I., Desch, P., Stöcher, M., Tinhofer, I., Egle, A., Greil, R., and Merkel, O.
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- 2009
21. Bronzezeitlicher Depotfund aus der Nähe von Bernburg
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Merkel, O.
- Abstract
Jahresschrift für mitteldeutsche Vorgeschichte, Bd. 3 (1904): Jahresschrift für die Vorgeschichte der sächsisch-thüringischen Länder
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- 2019
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22. Deregulation and epigenetic modification of BCL2-family genes cause resistance to venetoclax in hematologic malignancies
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Thomalla, D., Beckmann, L., Grimm, C., Oliverio, M., Meder, L., Herling, C.D., Nieper, P., Feldmann, T., Merkel, O., Lorsy, E., da Palma Guerreiro, A., von Jan, J., Kisis, I., Wasserburger, E., Claasen, J., Faitschuk-Meyer, E., Altmüller, J., Nürnberg, P., Yang, T.-P., Lienhard, M., Herwig, R., Kreuzer, K.-A., Pallasch, C.P., Büttner, R., Schäfer, S.C., Hartley, J., Abken, H., Peifer, M., Kashkar, H., Knittel, G., Eichhorst, B., Ullrich, R.T., Herling, M., Reinhardt, H.C., Hallek, M., Schweiger, M.R., and Frenzel, L.P.
- Abstract
The BCL2 inhibitor venetoclax has been approved to treat different hematological malignancies. Since there is no common genetic alteration causing resistance to venetoclax in CLL and B cell lymphoma, we asked if epigenetic events might be involved in venetoclax resistance. Therefore, we employed whole exome sequencing, methylated DNA immunoprecipitation sequencing and genome wide CRISPR/Cas9 screening to investigate venetoclax resistance in aggressive lymphoma and high-risk CLL patients. We identified a regulatory CpG island within the PUMApromoter which is methylated upon venetoclax treatment, mediating PUMAdownregulation on transcript and protein level. PUMAexpression and sensitivity towards venetoclax can be restored by inhibition of methyltransferases. We can demonstrate that loss of PUMA results in metabolic reprogramming with higher OXPHOS and ATP production, resembling the metabolic phenotype that is seen upon venetoclax resistance. While PUMA loss is specific for acquired venetoclax resistance but not for acquired MCL1 resistance and is not seen in CLL patients after chemotherapy-resistance, BAX is essential for sensitivity towards both venetoclax and MCL1 inhibition. As we found loss of BAX in Richter’s syndrome patients after venetoclax failure, we defined BAX-mediated apoptosis to be critical for drug resistance but not for disease progression of CLL into aggressive DLBCL in vivo. A compound screen revealed TRAIL-mediated apoptosis as a target to overcome BAX deficiency. Furthermore, antibody or CAR T cells eliminated venetoclax resistant lymphoma cells, paving a clinically applicable way to overcome venetoclax resistance.
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- 2024
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23. Effects of Surface Charge, PEGylation and Functionalization with Dipalmitoylphosphatidyldiglycerol on Liposome–Cell Interactions and Local Drug Delivery to Solid Tumors via Thermosensitive Liposomes
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Petrini M, Lokerse WJM, Mach A, Hossann M, Merkel OM, and Lindner LH
- Subjects
thermosensitive liposomes ,mild hyperthermia ,cationic liposomes ,dual tumor targeting ,drug delivery ,liposome functionalization ,Medicine (General) ,R5-920 - Abstract
Matteo Petrini,1,2 Wouter JM Lokerse,1 Agnieszka Mach,1 Martin Hossann,3 Olivia M Merkel,2 Lars H Lindner1 1Department of Internal Medicine III, University Hospital, Ludwig Maximilian University, Munich, Germany; 2Department of Pharmacy, Pharmaceutical Technology and Biopharmaceutics, Ludwig Maximilian University, Munich, Germany; 3Thermosome GmbH, Planegg, GermanyCorrespondence: Lars H LindnerLudwig Maximilian University, Department of Internal Medicine III, Klinikum Grosshadern, Marchioninistr. 15, Munich, 81377, GermanyTel +49-89-7095-4768Fax +49-89-7095-4776Email lars.lindner@med.uni-muenchen.dePurpose: Previous studies demonstrated the possibility of targeting tumor-angiogenic endothelial cells with positively charged nanocarriers, such as cationic liposomes. We investigated the active targeting potential of positively charged nanoparticles in combination with the heat-induced drug release function of thermosensitive liposomes (TSL). This novel dual-targeted approach via cationic TSL (CTSL) was thoroughly explored using either a novel synthetic phospholipid 1,2-dipalmitoyl-sn-glycero-3-phosphodiglycerol (DPPG2) or a conventional polyethylene glycol (PEG) surface modification. Anionic particles containing either DPPG2 or PEG were also included in the study to highlight difference in tumor enrichment driven by surface charge. With this study, we aim to provide a deep insight into the main differences between DPPG2- and PEG-functionalized liposomes, focusing on the delivery of a well-known cytotoxic drug (doxorubicin; DOX) in combination with local hyperthermia (HT, 41– 43°C).Materials and Methods: DPPG2- and PEG-based cationic TSLs (PG2-CTSL/PEG-CTSL) were thoroughly analyzed for size, surface charge, and heat-triggered DOX release. Cancer cell targeting and DOX delivery was evaluated by FACS, fluorescence imaging, and HPLC. In vivo particle behavior was analyzed by assessing DOX biodistribution with local HT application in tumor-bearing animals.Results: The absence of PEG in PG2-CTSL promoted more efficient liposome–cell interactions, resulting in a higher DOX delivery and cancer cell toxicity compared with PEG-CTSL. By exploiting the dual-targeting function of CTSLs, we were able to selectively trigger DOX release in the intracellular compartment by HT. When tested in vivo, local HT promoted an increase in intratumoral DOX levels for all (C)TSLs tested, with DOX enrichment factors ranging from 3 to 14-fold depending on the type of formulation.Conclusion: Cationic particles showed lower hemocompatibility than their anionic counterparts, which was partially mitigated when PEG was grafted on the liposome surface. DPPG2-based anionic TSL showed optimal local drug delivery compared to all other formulations tested, demonstrating the potential advantages of using DPPG2 lipid in designing liposomes for tumor-targeted applications.Keywords: thermosensitive liposomes, mild hyperthermia, cationic liposomes, dual tumor targeting, drug delivery, liposome functionalization
- Published
- 2021
24. PDGFR blockade is a rational and effective therapy for NPM-ALK\u2013driven lymphomas
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Laimer D, Dolznig H, Kollmann K, Vesely PW, Schlederer M, Merkel O, Schiefer AI, Hassler MR, Heider S, Amenitsch L, Thallinger C, Staber PB, Simonitsch-Klupp I, Artaker M, Lagger S, Turner SD, Pileri S, Piccaluga PP, Valent P, Messana K, Landra I, Weichhart T, Knapp S, Shehata M, Todaro M, Sexl V, Hxf6fler G, Piva R, Medico E, Ruggeri BA, Cheng M, Eferl R, Egger G, Penninger JM, Jaeger U, Moriggl R, Inghirami G, and Kenner L
- Published
- 2012
25. JunB and PTEN in prostate cancer: ‘loss is nothing else than change’
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Birner, P, primary, Egger, G, additional, Merkel, O, additional, and Kenner, L, additional
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- 2015
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26. SYSTEMATIC DRUG SENSITIVITY SCREENING IN LYMPHOID MALIGNANCIES IDENTIFIES VULNERABILITIES OF CHRONIC LYMPHOCYTIC LEUKEMIA WITH HIGH RISK ABERRATIONS
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Sellner, L., Oles, M., Anders, S., Zapatka, M., Lukas, M., Slabicki, M., Blume, C., Huellein, J., Stolz, T., Muley, C., Sill, M., Oakes, C. C., Dietrich, S., Merkel, O., Jauch, A., Schrader, A., Hensel, M., Rossi, D., Zirlik, K., Herling, M., Nguyen-Khac, F., Seiffert, M., Dreger, P., von Kalle, C., Ho, A. D., Glimm, H., Duerig, J., Ringshausen, I., Huber, W., Zenz, T., Sellner, L., Oles, M., Anders, S., Zapatka, M., Lukas, M., Slabicki, M., Blume, C., Huellein, J., Stolz, T., Muley, C., Sill, M., Oakes, C. C., Dietrich, S., Merkel, O., Jauch, A., Schrader, A., Hensel, M., Rossi, D., Zirlik, K., Herling, M., Nguyen-Khac, F., Seiffert, M., Dreger, P., von Kalle, C., Ho, A. D., Glimm, H., Duerig, J., Ringshausen, I., Huber, W., and Zenz, T.
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- 2014
27. 535: Small RNA sequencing identifies microRNAs involved in B-cell receptor signaling in chronic lymphocytic leukemia
- Author
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Blume, C.J., primary, Hielscher, T., additional, Hotz-Wagenblatt, A., additional, Sellner, L., additional, Hüllein, J., additional, Stolz, T., additional, Oakes, C.C., additional, Merkel, O., additional, and Zenz, T., additional
- Published
- 2014
- Full Text
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28. Anaplastic large cell lymphoma-propagating cells are detectable by side population analysis and possess an expression profile reflective of a primitive origin
- Author
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Moti, N, primary, Malcolm, T, additional, Hamoudi, R, additional, Mian, S, additional, Garland, G, additional, Hook, C E, additional, Burke, G A A, additional, Wasik, M A, additional, Merkel, O, additional, Kenner, L, additional, Laurenti, E, additional, Dick, J E, additional, and Turner, S D, additional
- Published
- 2014
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29. What Do We Do with Chronic Lymphocytic Leukemia with 17p Deletion?
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Sellner, L., primary, Denzinger, S., additional, Dietrich, S., additional, Glimm, H., additional, Merkel, O., additional, Dreger, P., additional, and Zenz, T., additional
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- 2012
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30. Anwendung von Co-Komplexen aus PEGylierten Polyethylenimin- Derivaten (PEG-PEI) und 2'O-Methyl-Modifizierter siRNA als nicht-virale Genvektoren in okulärem Gewebe, sowie deren Biodistribution nach topischer und intravitrealer Applikation in Mäusen
- Author
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Dutescu, RM, primary, Merkel, O, additional, Morawiez, L, additional, Kissel, T, additional, and Rüther, KW, additional
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- 2009
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31. Nanohale – PEI(-PEG)/siRNA nanoscale complexes, inducing RNA interference (RNAi), for systemic and local siRNA delivery to the lung
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Malek, A, primary, Aigner, A, additional, Merkel, O, additional, Czubayko, F, additional, and Kissel, T, additional
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- 2008
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32. Nanohale – Cytotoxic and proinflammatory evaluation of various PEI particles on lung target cells
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Beyerle, A, primary, Merkel, O, additional, Schulz, H, additional, Kissel, T, additional, and Stöger, T, additional
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- 2008
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33. Compartmentalization of TNF Receptor 1 SignalingInternalized TNF Receptosomes as Death Signaling Vesicles
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SCHNEIDERBRACHERT, W, primary, TCHIKOV, V, additional, NEUMEYER, J, additional, JAKOB, M, additional, WINOTOMORBACH, S, additional, HELDFEINDT, J, additional, HEINRICH, M, additional, MERKEL, O, additional, EHRENSCHWENDER, M, additional, and ADAM, D, additional
- Published
- 2004
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34. Characterization and function in vivo of two novel phospholipases B/lysophospholipases from Saccharomyces cerevisiae.
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Merkel, O, Fido, M, Mayr, J A, Prüger, H, Raab, F, Zandonella, G, Kohlwein, S D, and Paltauf, F
- Abstract
The yeast genome contains two genes, designated as PLB2 and PLB3, that are 67% and 62% identical, respectively, to PLB1, which codes for a phospholipase B/lysophospholipase in yeast (Lee, S. K., Patton, J. L., Fido, M., Hines, L. K., Kohlwein, S. D., Paltauf, F., Henry, S. A., and Levin, D. E. (1994) J. Biol. Chem. 269, 19725-19730). Deletion and overexpression studies and in vivo and in vitro activity measurements suggest that both genes indeed code for phospholipases B/lysophospholipases. In cell free extracts of a plb1 plb2 plb3 triple mutant, no phospholipase B activity was detectable. Upon overexpression of PLB2 in a plb1 plb3 mutant background, phospholipase B activity was detectable in the plasma membrane, periplasmic space extracts and the culture supernatant. Similar to Plb1p, Plb2p appears to accept all major phospholipid classes, with a preference for acidic phospholipids including phosphatidylinositol 3',4'-bisphosphate and phosphatidic acid. Consistent with a function as an extracellular lysophospholipase, PLB2 overexpression conferred resistance to lyso-phosphatidylcholine. Deletion of Plb2p function had no effect on glycerophosphoinositol or glycerophosphocholine release in vivo, in contrast to a deletion of Plb3p function, which resulted in a 50% reduction of phosphatidylinositol breakdown and glycerophosphoinositol release from the cells. In vitro, Plb3p hydrolyzes only phosphatidylinositol and phosphatidylserine and, to a lesser extent, their lyso-analogs. Plb3p activity in a plb1 plb2 mutant background was observed in periplasmic space extracts. Both Plb3p and Plb2p display transacylase activity in vitro, in the presence or absence, respectively, of detergent.
- Published
- 1999
35. Interdependent regulation of p53 and miR-34a in chronic lymphocytic leukemia
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Merkel O, Asslaber D, Jd, Piñón, Alexander Egle, and Greil R
36. AF1q is a novel TCF7 co-factor which activates CD44 and promotes breast cancer metastasis
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Park J, Schlederer M, Schreiber M, Ice R, Merkel O, Bilban M, Hofbauer S, Kim S, Addison J, Zou J, Ji C, St, Bunting, Wang Z, Shoham M, Huang G, Bago-Horvath Z, Lf, Gibson, Rojanasakul Y, Remick S, and Ivanov A
37. Hybrid lipid/polymer nanoparticles to tackle the cystic fibrosis mucus barrier in sirna delivery to the lungs: Does pegylation make the difference?
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Gemma Conte, Gabriella Costabile, Domizia Baldassi, Valeria Rondelli, Rosaria Bassi, Diego Colombo, Giulia Linardos, Ersilia V. Fiscarelli, Raffaella Sorrentino, Agnese Miro, Fabiana Quaglia, Paola Brocca, Ivana d’Angelo, Olivia M. Merkel, Francesca Ungaro, Conte, G., Costabile, G., Baldassi, D., Rondelli, V., Bassi, R., Colombo, D., Linardos, G., Fiscarelli, E. V., Sorrentino, R., Miro, A., Quaglia, F., Brocca, P., D'Angelo, I., Merkel, O. M., and Ungaro, F.
- Subjects
Sirna delivery ,Cystic Fibrosis ,Hybrid nanoparticle ,Polymers ,Sax ,respiratory system ,Mucus ,X-Ray Diffraction ,Cystic fibrosi ,Scattering, Small Angle ,Humans ,Nanoparticles ,General Materials Science ,Lung mucu ,RNA, Small Interfering ,Lung - Abstract
Inhaled siRNA therapy has a unique potential for treatment of severe lung diseases, such as cystic fibrosis (CF). Nevertheless, a drug delivery system tackling lung barriers is mandatory to enhance gene silencing efficacy in the airway epithelium. We recently demonstrated that lipid-polymer hybrid nanoparticles (hNPs), comprising a poly(lactic-co-glycolic) acid (PLGA) core and a lipid shell of dipalmitoyl phosphatidylcholine (DPPC), may assist the transport of the nucleic acid cargo through mucus-covered human airway epithelium. To study in depth the potential of hNPs for siRNA delivery to the lungs and to investigate the hypothesized benefit of PEGylation, here, an siRNA pool against the nuclear factor-kappa B (siNF kappa B) was encapsulated inside hNPs, endowed with a non-PEGylated (DPPC) or a PEGylated (1,2-distearoyl-sn-glycero-3-phosphoethanolamine-poly(ethylene glycol) or DSPE-PEG) lipid shell. Resulting hNPs were tested for their stability profiles and transport properties in artificial CF mucus, mucus collected from CF cells, and sputum samples from a heterogeneous and representative set of CF patients. Initial information on hNP properties governing their interaction with airway mucus was acquired by small-angle X-ray scattering (SAXS) studies in artificial and cellular CF mucus. The diffusion profiles of hNPs through CF sputa suggested a crucial role of lung colonization of the corresponding donor patient, affecting the mucin type and content of the sample. Noteworthy, PEGylation did not boost mucus penetration in complex and sticky samples, such as CF sputa from patients with polymicrobial colonization. In parallel, in vitro cell uptake studies performed on mucus-lined Calu-3 cells grown at the air-liquid interface (ALI) confirmed the improved ability of non-PEGylated hNPs to overcome mucus and cellular lung barriers. Furthermore, effective in vitro NF kappa B gene silencing was achieved in LPS-stimulated 16HBE14o-cells. Overall, the results highlight the potential of non-PEGylated hNPs as carriers for pulmonary delivery of siRNA for local treatment of CF lung disease. Furthermore, this study provides a detailed understanding of how distinct models may provide different information on nanoparticle interaction with the mucus barrier.
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- 2022
38. novel analytical approaches to characterize particles in biopharmaceuticals
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Grabarek, A.D., Jiskoot, W., Hawe, A., Irth, H., Bouwstra, J.A., Frijlink, H., Juppo, A., Merkel, O., Westen, G. van, Volkin, D., and Leiden University
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Formulation ,Protein stability ,Machine learning ,Particle characterization ,Nanoparticles ,Particle impurities ,Microparticles ,Analytical characterization ,Cell therapy - Abstract
Particles are omnipresent in biopharmaceutical products. In protein-based therapeutics such particles are generally associated with impurities, either derived from the drug product itself (e.g. protein aggregates), or from extrinsic contaminations (e.g. cellulose fibers). These impurities can affect product stability, as well as cause adverse effects once introduced into the human body. Particulate impurities are present over a wide range of sizes (from nanometers to millimeters) making them difficult to characterize by using a single method.Novel drug products may also contain particles that act as the active pharmaceutical ingredient (e.g., living cells) or a drug delivery vehicle (e.g., lipid nanoparticles). Unwanted immunotoxicity and inconsistent in vivo functionality can result from particle instability and aggregate formation. Therefore, the efficacy and safety of these therapeutics is dependent on the particle composition, quantity and size distribution.Consequently, well-established methods are required to quantify and characterize particles in the submicron- and micron-size ranges. In this thesis, we developed new approaches which allow for comprehensive characterization of the particle populations present in biopharmaceutical products, both as impurities or as API. Furthermore, the performed work focused on comparing different particle characterization techniques to allow a better understanding of the limitations and strengths of each method applied.
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- 2021
39. STAT3 and TP53 mutations associate with poor prognosis in anaplastic large cell lymphoma
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Geeta G. Sharma, Daniel Filip, Marek Mráz, Ivonne-Aidee Montes-Mojarro, Falko Fend, Šárka Pospíšilová, Andrea Janíková, David Belada, Boris Tichy, Nina Prokoph, Katerina Kamaradova, Vojtech Bystry, Luca Mologni, Hugo Larose, Carlo Gambacorti-Passerini, Suzanne D. Turner, Cosimo Lobello, Lenka Radová, Olaf Merkel, Huan-Chang Liang, Lobello, C, Tichy, B, Bystry, V, Radova, L, Filip, D, Mraz, M, Montes-Mojarro, I, Prokoph, N, Larose, H, Liang, H, Sharma, G, Mologni, L, Belada, D, Kamaradova, K, Fend, F, Gambacorti Passerini, C, Merkel, O, Turner, S, Janikova, A, Pospisilova, S, Lobello, Cosimo [0000-0003-1329-2113], Prokoph, Nina [0000-0002-6429-9895], Larose, Hugo [0000-0003-4678-6048], Liang, Huan-Chang [0000-0003-2612-3714], Fend, Falko [0000-0002-5496-293X], Gambacorti-Passerini, Carlo [0000-0001-6058-515X], Turner, Suzanne D. [0000-0002-8439-4507], Pospisilova, Sarka [0000-0001-7136-2680], Apollo - University of Cambridge Repository, and Turner, Suzanne D [0000-0002-8439-4507]
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Adult ,Male ,STAT3 Transcription Factor ,Cancer Research ,Letter ,Anaplastic Lymphoma ,Adolescent ,45/22 ,45/23 ,631/67/69 ,CHOP ,medicine.disease_cause ,Tp53 mutation ,ALK P53 ,Young Adult ,hemic and lymphatic diseases ,Genetics research ,Cancer genomics ,medicine ,Humans ,Young adult ,631/208/69 ,STAT3 ,Child ,Anaplastic large-cell lymphoma ,Aged ,Aged, 80 and over ,Mutation ,biology ,business.industry ,692/308/2056 ,45/77 ,Hematology ,Middle Aged ,medicine.disease ,Prognosis ,Lymphoma ,Oncology ,Child, Preschool ,13/51 ,biology.protein ,Cancer research ,Lymphoma, Large-Cell, Anaplastic ,Female ,Tumor Suppressor Protein p53 ,business - Abstract
Funder: European Union’s Horizon 2020 Marie Skłodowska – Curie Innovative Training Networks (ITN - ETN) under grant agreement No.: 675712European Union’s Horizon 2020 Marie Skłodowska – Curie Innovative Training Networks (ITN - ETN) under grant agreement No.: 675712 Czech Science Foundation (GA CR), junior project no. 19-23424Y MEYS CZ project CEITEC 2020 (LQ1601), Funder: MEYS CZ project CEITEC 2020 (LQ1601) NCMG research infrastructure (LM22018132 funded by MEYS CR), Funder: European Union’s Horizon 2020 Marie Skłodowska – Curie Innovative Training Networks (ITN - ETN) under grant agreement No.: 675712., Funder: MH CZ-RVO 65269705
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- 2021
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40. Whole exome sequencing reveals NOTCH1 mutations in anaplastic large cell lymphoma and points to Notch both as a key pathway and a potential therapeutic target
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Gerald Hoefler, Jamie D. Matthews, Mariusz A. Wasik, Cosimo Lobello, Šárka Pospíšilová, Feroze Fazaludeen, Ahmed Elmouna, Monica Ceccon, Edem Nuglozeh, Martin Zimmermann, Michaela Schlederer, Hugo Larose, Christine Damm-Welk, Wilhelm Woessmann, Lukas Kenner, Giorgio Inghirami, Wolfram Klapper, Ibraheem Ashankyty, Olaf Merkel, Tom L. Blundell, Nina Prokoph, Shahid Mian, Luca Mologni, Laurence Lamant, Andrea Janíková, Andrea Malone, Alina Federova, G. A. Amos Burke, Suzanne D. Turner, Owen P. Smith, Carlo Gambacorti-Passerini, Sandra Högler, Ali F. Alsulami, Stephen P. Ducray, Larose, H, Prokoph, N, Matthews, J, Schlederer, M, Hogler, S, Alsulami, A, Ducray, S, Nuglozeh, E, Fazaludeen, M, Elmouna, A, Ceccon, M, Mologni, L, Gambacorti Passerini, C, Hoefler, G, Lobello, C, Pospisilova, S, Janikova, A, Woessmann, W, Damm-Welk, C, Zimmermann, M, Fedorova, A, Malone, A, Smith, O, Wasik, M, Inghirami, G, Lamant, L, Blundell, T, Klapper, W, Merkel, O, Amos Burke, G, Mian, S, Ashankyty, I, Kenner, L, Turner, S, Larose, Hugo [0000-0003-4678-6048], Matthews, Jamie [0000-0002-2980-8615], Blundell, Tom [0000-0002-2708-8992], Turner, Suzanne [0000-0002-8439-4507], and Apollo - University of Cambridge Repository
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medicine.drug_class ,Notch signaling pathway ,Article ,Whole Exome Sequencing ,Small hairpin RNA ,03 medical and health sciences ,0302 clinical medicine ,hemic and lymphatic diseases ,Cell Line, Tumor ,Protein-Tyrosine Kinase ,Exome Sequencing ,medicine ,Humans ,Anaplastic lymphoma kinase ,Gene silencing ,Receptor, Notch1 ,Anaplastic large-cell lymphoma ,Exome sequencing ,030304 developmental biology ,0303 health sciences ,Crizotinib ,Chemistry ,Receptor Protein-Tyrosine Kinases ,Hematology ,Protein-Tyrosine Kinases ,medicine.disease ,3. Good health ,ALK inhibitor ,Receptor Protein-Tyrosine Kinase ,030220 oncology & carcinogenesis ,Mutation ,Cancer research ,Lymphoma, Large-Cell, Anaplastic ,Neoplasm Recurrence, Local ,medicine.drug ,Human - Abstract
Patients diagnosed with anaplastic large cell lymphoma (ALCL) are still treated with toxic multi-agent chemotherapy and as many as 25-50% of patients relapse. To understand disease pathology and to uncover novel targets for therapy, we performed whole-exome sequencing of anaplastic lymphoma kinase (ALK)+ ALCL, as well as gene-set enrichment analysis. This revealed that the T-cell receptor and Notch pathways were the most enriched in mutations. In particular, variant T349P of NOTCH1, which confers a growth advantage to cells in which it is expressed, was detected in 12% of ALK+ and ALK– ALCL patients’ samples. Furthermore, we demonstrated that NPM-ALK promotes NOTCH1 expression through binding of STAT3 upstream of NOTCH1. Moreover, inhibition of NOTCH1 with γ- secretase inhibitors or silencing by short hairpin RNA leads to apoptosis; cotreatment in vitro with the ALK inhibitor crizotinib led to additive/synergistic antitumor activity suggesting that this may be an appropriate combination therapy for future use in the circumvention of ALK inhibitor resistance. Indeed, crizotinib-resistant and -sensitive ALCL were equally sensitive to γ-secretase inhibitors. In conclusion, we show a variant in the extracellular domain of NOTCH1 that provides a growth advantage to cells and confirm the suitability of the Notch pathway as a second-line druggable target in ALK+ ALCL.
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- 2021
41. IL10RA modulates crizotinib sensitivity in NPM1-ALK+ anaplastic large cell lymphoma
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Geeta G. Sharma, Sorcha Forde, Hélène Pacquement, Ivonne A. Montes-Mojarro, Ralf Jauch, Wolfram Klapper, Cosimo Lobello, Liam C. Lee, Luca Mologni, Anne Lambilliotte, Suzanne D. Turner, Laurence Brugières, Roberto Chiarle, Stephen P. Ducray, Jamie D. Matthews, Birgit Geoerger, Shahid Pervez, Carlo Gambacorti-Passerini, Lukas Kenner, Šárka Pospíšilová, Klaas Bahnsen, Shi-Lu Luan, Nina Prokoph, Andrea Janíková, G. A. Amos Burke, Olaf Merkel, Huan-Chang Liang, Elif Karaca-Atabay, Hugo Larose, Wilhelm Woessmann, Qi Wang, Andishe Attarbaschi, Jack M. Monahan, Vikas Malik, Judith Landman-Parker, Isaia Barbieri, Gilles Vassal, Gudrun Schleiermacher, Nicola A. Probst, Matthews, Jamie [0000-0002-2980-8615], Larose, Hugo [0000-0003-4678-6048], Barbieri, Isaia [0000-0003-3035-8970], Turner, Suzanne [0000-0002-8439-4507], Apollo - University of Cambridge Repository, Prokoph, N, Probst, N, Lee, L, Monahan, J, Matthews, J, Liang, H, Bahnsen, K, Montes-Mojarro, I, Karaca-Atabay, E, Sharma, G, Malik, V, Larose, H, Forde, S, Ducray, S, Lobello, C, Wang, Q, Luan, S, Pospisilova, S, Gambacorti Passerini, C, Burke, G, Pervez, S, Attarbaschi, A, Janikova, A, Pacquement, H, Landman-Parker, J, Lambilliotte, A, Schleiermacher, G, Klapper, W, Jauch, R, Woessmann, W, Vassal, G, Kenner, L, Merkel, O, Mologni, L, Chiarle, R, Brugieres, L, Geoerger, B, Barbieri, I, and Turner, S
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0301 basic medicine ,STAT3 Transcription Factor ,NPM1 ,medicine.drug_class ,Immunology ,Interleukin-10 Receptor alpha Subunit ,Gene Expression ,Antineoplastic Agents ,Biochemistry ,Models, Biological ,Interleukin 10 receptor, alpha subunit ,Cell Line ,03 medical and health sciences ,0302 clinical medicine ,Crizotinib ,hemic and lymphatic diseases ,medicine ,Anaplastic lymphoma kinase ,Humans ,Anaplastic large-cell lymphoma ,Protein Kinase Inhibitors ,Gene Editing ,Dose-Response Relationship, Drug ,business.industry ,Cancer ,Cell Biology ,Hematology ,Protein-Tyrosine Kinases ,medicine.disease ,Chemotherapy regimen ,Immunohistochemistry ,ALK inhibitor ,030104 developmental biology ,Drug Resistance, Neoplasm ,Cancer research ,Lymphoma, Large-Cell, Anaplastic ,IL10 ALK ,CRISPR-Cas Systems ,business ,Nucleophosmin ,030215 immunology ,medicine.drug ,Signal Transduction - Abstract
Anaplastic large cell lymphoma (ALCL) is a T-cell malignancy predominantly driven by a hyperactive anaplastic lymphoma kinase (ALK) fusion protein. ALK inhibitors, such as crizotinib, provide alternatives to standard chemotherapy with reduced toxicity and side effects. Children with lymphomas driven by nucleophosmin 1 (NPM1)-ALK fusion proteins achieved an objective response rate to ALK inhibition therapy of 54% to 90% in clinical trials; however, a subset of patients progressed within the first 3 months of treatment. The mechanism for the development of ALK inhibitor resistance is unknown. Through genome-wide clustered regularly interspaced short palindromic repeats (CRISPR) activation and knockout screens in ALCL cell lines, combined with RNA sequencing data derived from ALK inhibitor–relapsed patient tumors, we show that resistance to ALK inhibition by crizotinib in ALCL can be driven by aberrant upregulation of interleukin 10 receptor subunit alpha (IL10RA). Elevated IL10RA expression rewires the STAT3 signaling pathway, bypassing otherwise critical phosphorylation by NPM1-ALK. IL-10RA expression does not correlate with response to standard chemotherapy in pediatric patients, suggesting that a combination of crizotinib and chemotherapy could prevent ALK inhibitor resistance–specific relapse.
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- 2020
42. PDGFR blockade is a rational and effective therapy for NPM-ALK-driven lymphomas
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Giorgio Inghirami, Philipp B. Staber, Karoline Kollmann, Medhat Shehata, Olaf Merkel, Veronika Sexl, Katia Messana, Pier Paolo Piccaluga, Robert Eferl, Maria Todaro, Susi Heider, Peter Valent, Sylvia Knapp, Bruce Ruggeri, Enzo Medico, Christiane Thallinger, Thomas Weichhart, Ingrid Simonitsch-Klupp, Helmut Dolznig, Ulrich Jaeger, Sabine Lagger, Indira Landra, Mangeng Cheng, Lena Amenitsch, Melanie R. Hassler, Paul Vesely, Richard Moriggl, Josef M. Penninger, Suzanne D. Turner, Matthias Artaker, Roberto Piva, Daniela Laimer, Stefano Pileri, Michaela Schlederer, Gerda Egger, Ana Iris Schiefer, Lukas Kenner, Gerald Höfler, Laimer D, Dolznig H, Kollmann K, Vesely PW, Schlederer M, Merkel O, Schiefer AI, Hassler MR, Heider S, Amenitsch L, Thallinger C, Staber PB, Simonitsch-Klupp I, Artaker M, Lagger S, Turner SD, Pileri S, Piccaluga PP, Valent P, Messana K, Landra I, Weichhart T, Knapp S, Shehata M, Todaro M, Sexl V, Höfler G, Piva R, Medico E, Ruggeri BA, Cheng M, Eferl R, Egger G, Penninger JM, Jaeger U, Moriggl R, Inghirami G, and Kenner L
- Subjects
Receptor, Platelet-Derived Growth Factor alpha ,Oncogene Protein p65(gag-jun) ,lymphomas ,Piperazines ,Translocation, Genetic ,Mice ,0302 clinical medicine ,hemic and lymphatic diseases ,Anaplastic Lymphoma Kinase ,Molecular Targeted Therapy ,Anaplastic large-cell lymphoma ,0303 health sciences ,integumentary system ,Remission Induction ,Nuclear Proteins ,General Medicine ,Protein-Tyrosine Kinases ,3. Good health ,Gene Expression Regulation, Neoplastic ,030220 oncology & carcinogenesis ,Benzamides ,Imatinib Mesylate ,Lymphoma, Large-Cell, Anaplastic ,Nucleophosmin ,Platelet-derived growth factor receptor ,Adult ,JUNB ,Mice, Transgenic ,PDGFRB ,PDGFRA ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Receptor, Platelet-Derived Growth Factor beta ,03 medical and health sciences ,Growth factor receptor ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Neoplasm Staging ,030304 developmental biology ,Receptor Protein-Tyrosine Kinases ,medicine.disease ,Lymphoma ,Transcription Factor AP-1 ,Pyrimidines ,Imatinib mesylate ,Cancer research ,biology.protein ,Stem Cell Transplantation - Abstract
Anaplastic large cell lymphoma (ALCL) is an aggressive non-Hodgkin's lymphoma found in children and young adults. ALCLs frequently carry a chromosomal translocation that results in expression of the oncoprotein nucleophosmin-anaplastic lymphoma kinase (NPM-ALK). The key molecular downstream events required for NPM-ALK-triggered lymphoma growth have been only partly unveiled. Here we show that the activator protein 1 family members JUN and JUNB promote lymphoma development and tumor dissemination through transcriptional regulation of platelet-derived growth factor receptor-β (PDGFRB) in a mouse model of NPM-ALK-triggered lymphomagenesis. Therapeutic inhibition of PDGFRB markedly prolonged survival of NPM-ALK transgenic mice and increased the efficacy of an ALK-specific inhibitor in transplanted NPM-ALK tumors. Notably, inhibition of PDGFRA and PDGFRB in a patient with refractory late-stage NPM-ALK(+) ALCL resulted in rapid, complete and sustained remission. Together, our data identify PDGFRB as a previously unknown JUN and JUNB target that could be a highly effective therapy for ALCL.
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- 2012
43. MDM2 promotor polymorphism and disease characteristics in chronic lymphocytic leukemia: results of an individual patient data-based meta-analysis
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Davide Rossi, Gianluca Gaidano, Peter Söderkvist, Richard Greil, Paolo Ghia, Šárka Pospíšilová, Hartmut Döhner, Richard Rosenquist, Aneela Majid, Anton Parker, Šárka Pavlová, Gareth L. Bond, Stephan Stilgenbauer, Mohd Arifin Kaderi, David Oscier, Zuzana Tvaruzkova, Axel Benner, Emili Montserrat, Thorsten Zenz, Larry Mansouri, Holger Nückel, Olaf Merkel, Ulrich Dührsen, Kerstin Willander, Martin J. S. Dyer, Mats Linderholm, Benner, A, Mansouri, L, Rossi, D, Majid, A, Willander, K, Parker, A, Bond, G, Pavlova, S, Nückel, H, Merkel, O, Ghia, PAOLO PROSPERO, Montserrat, E, Kaderi, Ma, Rosenquist, R, Gaidano, G, Dyer, Mj, Söderkvist, P, Linderholm, M, Oscier, D, Tvaruzkova, Z, Pospisilova, S, Dührsen, U, Greil, R, Döhner, H, Stilgenbauer, S, Zenz, T., and Universitat de Barcelona
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Oncology ,Adult ,Male ,medicine.medical_specialty ,Databases, Factual ,Chronic lymphocytic leukemia ,Medizin ,Single-nucleotide polymorphism ,Disease ,Biology ,Polymorphism, Single Nucleotide ,Cohort Studies ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Internal medicine ,Genotype ,medicine ,Genetics ,Humans ,Adults ,Leucèmia limfocítica crònica ,Promoter Regions, Genetic ,Guideline Articles ,030304 developmental biology ,Aged ,Aged, 80 and over ,0303 health sciences ,Proto-Oncogene Proteins c-mdm2 ,Hematology ,Middle Aged ,medicine.disease ,Adulthood ,Leukemia, Lymphocytic, Chronic, B-Cell ,3. Good health ,Log-rank test ,Estudi de casos ,030220 oncology & carcinogenesis ,Meta-analysis ,Cohort ,Immunology ,Female ,Case studies ,Genètica ,Cohort study - Abstract
A number of single nucleotide polymorphisms have been associated with disease predisposition in chronic lymphocytic leukemia. A single nucleotide polymorphism in the MDM2 promotor region, MDM2SNP309, was shown to soothe the p53 pathway. In the current study, we aimed to clarify the effect of the MDM2SNP309 on chronic lymphocytic leukemia characteristics and outcome. We performed a meta-analysis of data from 2598 individual patients from 10 different cohorts. Patients’ data and genetic analysis for MDM2SNP309 genotype, immunoglobulin heavy chain variable region mutation status and fluorescence in situ hybridization results were collected. There were no differences in overall survival based on the polymorphism (log rank test, stratified by study cohort; P=0.76; GG genotype: cohort-adjusted median overall survival of 151 months; TG: 153 months; TT: 149 months). In a multivariable Cox proportional hazards regression analysis, advanced age, male sex and unmutated immunoglobulin heavy chain variable region genes were associated with inferior survival, but not the MDM2 genotype. The MDM2SNP309 is unlikely to influence disease characteristics and prognosis in chronic lymphocytic leukemia. Studies investigating the impact of individual single nucleotide polymorphisms on prognosis are often controversial. This may be due to selection bias and small sample size. A meta-analysis based on individual patient data provides a reasonable strategy for prognostic factor analyses in the case of small individual studies. Individual patient data-based meta-analysis can, therefore, be a powerful tool to assess genetic risk factors in the absence of large studies.
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44. A rapid method to monitor structural perturbations of high-concentrated therapeutic antibody solutions using Intrinsic Tryptophan Fluorescence Emission spectroscopy.
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Brack L, Merkel O, and Schroeder R
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- Protein Aggregates, Protein Unfolding, Antibodies, Monoclonal chemistry, High-Throughput Screening Assays methods, Solutions, Tryptophan chemistry, Spectrometry, Fluorescence methods, Immunoglobulin G chemistry
- Abstract
Drug product development of therapeutic antibody formulations is still dictated by the risk of protein particle formation during processing or storage, which can lead to loss of potency and potential immunogenic reactions. Since structural perturbations are the main driver for irreversible protein aggregation, the conformational integrity of antibodies should be closely monitored. The present study evaluated the applicability of a plate reader-based high throughput method for Intrinsic Tryptophan Fluorescence Emission (ITFE) spectroscopy to detect protein aggregation due to protein unfolding in high-concentrated therapeutic antibody samples. The impact of fluorophore concentration on the ITFE signal in microplate readers was investigated by analysis of dilution series of two therapeutic antibodies and pure tryptophan. At low antibody concentrations (< 5 mg/mL, equivalent to 0.8 mM tryptophan), the low inner filter effect suggests a quasi-linear relationship between antibody concentration and ITFE intensity. In contrast, the constant ITFE intensity at high protein concentrations (> 40 mg/mL, equivalent to 6.1 mM tryptophan) indicate that ITFE spectroscopy measurements of IgG1 antibodies are feasible in therapeutically relevant concentrations (up to 223 mg/mL). Furthermore, the capability of the method to detect low levels of unfolding (around 1 %) was confirmed by limit of detection (LOD) determination with temperature-stressed antibody samples as degradation standards. Change of fluorescence intensity at the maximum (ΔIaM) was identified as sensitive descriptor for protein degradation, providing the lowest LOD values. The results demonstrate that ITFE spectroscopy performed in a microplate reader is a valuable tool for high-throughput monitoring of protein degradation in therapeutic antibody formulations., (Copyright © 2024 Elsevier B.V. All rights reserved.)
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- 2024
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45. JUN mediates the senescence associated secretory phenotype and immune cell recruitment to prevent prostate cancer progression.
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Redmer T, Raigel M, Sternberg C, Ziegler R, Probst C, Lindner D, Aufinger A, Limberger T, Trachtova K, Kodajova P, Högler S, Schlederer M, Stoiber S, Oberhuber M, Bolis M, Neubauer HA, Miranda S, Tomberger M, Harbusch NS, Garces de Los Fayos Alonso I, Sternberg F, Moriggl R, Theurillat JP, Tichy B, Bystry V, Persson JL, Mathas S, Aberger F, Strobl B, Pospisilova S, Merkel O, Egger G, Lagger S, and Kenner L
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- Male, Animals, Mice, Humans, Senescence-Associated Secretory Phenotype, Proto-Oncogene Proteins c-jun metabolism, Gene Expression Regulation, Neoplastic, Cell Line, Tumor, Gene Expression Profiling, Cellular Senescence genetics, Disease Models, Animal, Prostatic Neoplasms pathology, Prostatic Neoplasms genetics, Prostatic Neoplasms metabolism, PTEN Phosphohydrolase genetics, PTEN Phosphohydrolase metabolism, Disease Progression, Tumor Microenvironment immunology
- Abstract
Background: Prostate cancer develops through malignant transformation of the prostate epithelium in a stepwise, mutation-driven process. Although activator protein-1 transcription factors such as JUN have been implicated as potential oncogenic drivers, the molecular programs contributing to prostate cancer progression are not fully understood., Methods: We analyzed JUN expression in clinical prostate cancer samples across different stages and investigated its functional role in a Pten-deficient mouse model. We performed histopathological examinations, transcriptomic analyses and explored the senescence-associated secretory phenotype in the tumor microenvironment., Results: Elevated JUN levels characterized early-stage prostate cancer and predicted improved survival in human and murine samples. Immune-phenotyping of Pten-deficient prostates revealed high accumulation of tumor-infiltrating leukocytes, particularly innate immune cells, neutrophils and macrophages as well as high levels of STAT3 activation and IL-1β production. Jun depletion in a Pten-deficient background prevented immune cell attraction which was accompanied by significant reduction of active STAT3 and IL-1β and accelerated prostate tumor growth. Comparative transcriptome profiling of prostate epithelial cells revealed a senescence-associated gene signature, upregulation of pro-inflammatory processes involved in immune cell attraction and of chemokines such as IL-1β, TNF-α, CCL3 and CCL8 in Pten-deficient prostates. Strikingly, JUN depletion reversed both the senescence-associated secretory phenotype and senescence-associated immune cell infiltration but had no impact on cell cycle arrest. As a result, JUN depletion in Pten-deficient prostates interfered with the senescence-associated immune clearance and accelerated tumor growth., Conclusions: Our results suggest that JUN acts as tumor-suppressor and decelerates the progression of prostate cancer by transcriptional regulation of senescence- and inflammation-associated genes. This study opens avenues for novel treatment strategies that could impede disease progression and improve patient outcomes., (© 2024. The Author(s).)
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- 2024
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46. Targeting NRAS via miR-1304-5p or farnesyltransferase inhibition confers sensitivity to ALK inhibitors in ALK-mutant neuroblastoma.
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Pucci P, Lee LC, Han M, Matthews JD, Jahangiri L, Schlederer M, Manners E, Sorby-Adams A, Kaggie J, Trigg RM, Steel C, Hare L, James ER, Prokoph N, Ducray SP, Merkel O, Rifatbegovic F, Luo J, Taschner-Mandl S, Kenner L, Burke GAA, and Turner SD
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- Animals, Female, Humans, Mice, Apoptosis drug effects, Apoptosis genetics, Cell Line, Tumor, Drug Resistance, Neoplasm genetics, Drug Resistance, Neoplasm drug effects, Drug Synergism, Gene Expression Regulation, Neoplastic drug effects, Membrane Proteins metabolism, Membrane Proteins genetics, Mutation, Xenograft Model Antitumor Assays, Anaplastic Lymphoma Kinase genetics, Anaplastic Lymphoma Kinase metabolism, Anaplastic Lymphoma Kinase antagonists & inhibitors, Dibenzocycloheptenes, Farnesyltranstransferase antagonists & inhibitors, Farnesyltranstransferase metabolism, GTP Phosphohydrolases genetics, GTP Phosphohydrolases metabolism, MicroRNAs genetics, MicroRNAs metabolism, Neuroblastoma drug therapy, Neuroblastoma genetics, Neuroblastoma pathology, Neuroblastoma metabolism, Piperidines pharmacology, Piperidines therapeutic use, Protein Kinase Inhibitors pharmacology, Protein Kinase Inhibitors therapeutic use, Pyridines pharmacology, Pyridines therapeutic use
- Abstract
Targeting Anaplastic lymphoma kinase (ALK) is a promising therapeutic strategy for aberrant ALK-expressing malignancies including neuroblastoma, but resistance to ALK tyrosine kinase inhibitors (ALK TKI) is a distinct possibility necessitating drug combination therapeutic approaches. Using high-throughput, genome-wide CRISPR-Cas9 knockout screens, we identify miR-1304-5p loss as a desensitizer to ALK TKIs in aberrant ALK-expressing neuroblastoma; inhibition of miR-1304-5p decreases, while mimics of this miRNA increase the sensitivity of neuroblastoma cells to ALK TKIs. We show that miR-1304-5p targets NRAS, decreasing cell viability via induction of apoptosis. It follows that the farnesyltransferase inhibitor (FTI) lonafarnib in addition to ALK TKIs act synergistically in neuroblastoma, inducing apoptosis in vitro. In particular, on combined treatment of neuroblastoma patient derived xenografts with an FTI and an ALK TKI complete regression of tumour growth is observed although tumours rapidly regrow on cessation of therapy. Overall, our data suggests that combined use of ALK TKIs and FTIs, constitutes a therapeutic approach to treat high risk neuroblastoma although prolonged therapy is likely required to prevent relapse., (© 2024. The Author(s).)
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- 2024
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47. STAT3 couples activated tyrosine kinase signaling to the oncogenic core transcriptional regulatory circuitry of anaplastic large cell lymphoma.
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Prutsch N, He S, Berezovskaya A, Durbin AD, Dharia NV, Maher KA, Matthews JD, Hare L, Turner SD, Stegmaier K, Kenner L, Merkel O, Look AT, Abraham BJ, and Zimmerman MW
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- Adult, Child, Humans, Anaplastic Lymphoma Kinase genetics, Anaplastic Lymphoma Kinase metabolism, Janus Kinases metabolism, STAT Transcription Factors metabolism, Cell Transformation, Neoplastic, Carcinogenesis genetics, STAT3 Transcription Factor genetics, Signal Transduction genetics, Lymphoma, Large-Cell, Anaplastic genetics, Lymphoma, Large-Cell, Anaplastic metabolism, Lymphoma, Large-Cell, Anaplastic pathology
- Abstract
Anaplastic large cell lymphoma (ALCL) is an aggressive, CD30
+ T cell lymphoma of children and adults. ALK fusion transcripts or mutations in the JAK-STAT pathway are observed in most ALCL tumors, but the mechanisms underlying tumorigenesis are not fully understood. Here, we show that dysregulated STAT3 in ALCL cooccupies enhancers with master transcription factors BATF3, IRF4, and IKZF1 to form a core regulatory circuit that establishes and maintains the malignant cell state in ALCL. Critical downstream targets of this network in ALCL cells include the protooncogene MYC, which requires active STAT3 to facilitate high levels of MYC transcription. The core autoregulatory transcriptional circuitry activity is reinforced by MYC binding to the enhancer regions associated with STAT3 and each of the core regulatory transcription factors. Thus, activation of STAT3 provides the crucial link between aberrant tyrosine kinase signaling and the core transcriptional machinery that drives tumorigenesis and creates therapeutic vulnerabilities in ALCL., Competing Interests: Declaration of interests K.S. is a member of the scientific advisory board and has stock options in Auron Therapeutics and received grant funding from Novartis and KronosBio on topics unrelated to this paper. B.J.A. is a shareholder in Syros Pharmaceuticals. N.V.D. is currently an employee of Genentech, and is a stockholder in Roche. A.T.L. is a shareholder in LightHorse Therapeutics and is a consultant/advisory board member for LightHorse Therapeutics and Omega Therapeutics. M.W.Z. is currently an employee and shareholder in Foghorn Therapeutics., (Copyright © 2024 The Author(s). Published by Elsevier Inc. All rights reserved.)- Published
- 2024
- Full Text
- View/download PDF
48. Patient-derived xenograft models of ALK+ ALCL reveal preclinical promise for therapy with brigatinib.
- Author
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Prokoph N, Matthews JD, Trigg RM, Montes-Mojarro IA, Burke GAA, Fend F, Merkel O, Kenner L, Geoerger B, Johnston R, Murray MJ, Riguad C, Brugières L, and Turner SD
- Subjects
- Child, Humans, Anaplastic Lymphoma Kinase, Crizotinib pharmacology, Crizotinib therapeutic use, Receptor Protein-Tyrosine Kinases therapeutic use, Heterografts, Neoplasm Recurrence, Local drug therapy, Organophosphorus Compounds pharmacology, Organophosphorus Compounds therapeutic use, Protein Kinase Inhibitors therapeutic use, Carcinoma, Non-Small-Cell Lung, Lymphoma, Large-Cell, Anaplastic drug therapy, Lymphoma, Large-Cell, Anaplastic pathology, Lung Neoplasms drug therapy
- Abstract
Anaplastic large-cell lymphoma (ALCL) is a T-cell malignancy predominantly driven by the oncogenic anaplastic lymphoma kinase (ALK), accounting for approximately 15% of all paediatric non-Hodgkin lymphoma. Patients with central nervous system (CNS) relapse are particularly difficult to treat with a 3-year overall survival of 49% and a median survival of 23.5 months. The second-generation ALK inhibitor brigatinib shows superior penetration of the blood-brain barrier unlike the first-generation drug crizotinib and has shown promising results in ALK+ non-small-cell lung cancer. However, the benefits of brigatinib in treating aggressive paediatric ALK+ ALCL are largely unknown. We established a patient-derived xenograft (PDX) resource from ALK+ ALCL patients at or before CNS relapse serving as models to facilitate the development of future therapies. We show in vivo that brigatinib is effective in inducing the remission of PDX models of crizotinib-resistant (ALK C1156Y, TP53 loss) ALCL and furthermore that it is superior to crizotinib as a second-line approach to the treatment of a standard chemotherapy relapsed/refractory ALCL PDX pointing to brigatinib as a future therapeutic option., (© 2023 The Authors. British Journal of Haematology published by British Society for Haematology and John Wiley & Sons Ltd.)
- Published
- 2023
- Full Text
- View/download PDF
49. Blocking STAT3/5 through direct or upstream kinase targeting in leukemic cutaneous T-cell lymphoma.
- Author
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Sorger H, Dey S, Vieyra-Garcia PA, Pölöske D, Teufelberger AR, de Araujo ED, Sedighi A, Graf R, Spiegl B, Lazzeri I, Braun T, Garces de Los Fayos Alonso I, Schlederer M, Timelthaler G, Kodajova P, Pirker C, Surbek M, Machtinger M, Graier T, Perchthaler I, Pan Y, Fink-Puches R, Cerroni L, Ober J, Otte M, Albrecht JD, Tin G, Abdeldayem A, Manaswiyoungkul P, Olaoye OO, Metzelder ML, Orlova A, Berger W, Wobser M, Nicolay JP, André F, Nguyen VA, Neubauer HA, Fleck R, Merkel O, Herling M, Heitzer E, Gunning PT, Kenner L, Moriggl R, and Wolf P
- Subjects
- Animals, Mice, Genomics, Heterografts, p21-Activated Kinases, Lymphoma, T-Cell, Cutaneous drug therapy
- Abstract
Leukemic cutaneous T-cell lymphomas (L-CTCL) are lymphoproliferative disorders of skin-homing mature T-cells causing severe symptoms and high mortality through chronic inflammation, tissue destruction, and serious infections. Despite numerous genomic sequencing efforts, recurrent driver mutations have not been identified, but chromosomal losses and gains are frequent and dominant. We integrated genomic landscape analyses with innovative pharmacologic interference studies to identify key vulnerable nodes in L-CTCL. We detected copy number gains of loci containing the STAT3/5 oncogenes in 74% (n = 17/23) of L-CTCL, which correlated with the increased clonal T-cell count in the blood. Dual inhibition of STAT3/5 using small-molecule degraders and multi-kinase blockers abolished L-CTCL cell growth in vitro and ex vivo, whereby PAK kinase inhibition was specifically selective for L-CTCL patient cells carrying STAT3/5 gains. Importantly, the PAK inhibitor FRAx597 demonstrated encouraging anti-leukemic activity in vivo by inhibiting tumor growth and disease dissemination in intradermally xenografted mice. We conclude that STAT3/5 and PAK kinase interaction represents a new therapeutic node to be further explored in L-CTCL., (© 2022 The Authors. Published under the terms of the CC BY 4.0 license.)
- Published
- 2022
- Full Text
- View/download PDF
50. Extracellular vesicles and PD-L1 suppress macrophages, inducing therapy resistance in TP53-deficient B-cell malignancies.
- Author
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Izquierdo E, Vorholt D, Blakemore S, Sackey B, Nolte JL, Barbarino V, Schmitz J, Nickel N, Bachurski D, Lobastova L, Nikolic M, Michalik M, Brinker R, Merkel O, Franitza M, Georgomanolis T, Neuhaus R, Koch M, Nasada N, Knittel G, Chapuy B, Ludwig N, Meese E, Frenzel L, Reinhardt HC, Peifer M, Rebollido-Rios R, Bruns H, Krüger M, Hallek M, and Pallasch CP
- Subjects
- Animals, Lymphoma metabolism, Macrophages metabolism, Mice, Neoplasms metabolism, B7-H1 Antigen genetics, B7-H1 Antigen metabolism, Extracellular Vesicles metabolism, Lymphoma, B-Cell genetics, Lymphoma, B-Cell metabolism
- Abstract
Genetic alterations in the DNA damage response (DDR) pathway are a frequent mechanism of resistance to chemoimmunotherapy (CIT) in B-cell malignancies. We have previously shown that the synergy of CIT relies on secretory crosstalk elicited by chemotherapy between the tumor cells and macrophages. Here, we show that loss of multiple different members of the DDR pathway inhibits macrophage phagocytic capacity in vitro and in vivo. Particularly, loss of TP53 led to decreased phagocytic capacity ex vivo across multiple B-cell malignancies. We demonstrate via in vivo cyclophosphamide treatment using the Eμ-TCL1 mouse model that loss of macrophage phagocytic capacity in Tp53-deleted leukemia is driven by a significant downregulation of a phagocytic transcriptomic signature using small conditional RNA sequencing. By analyzing the tumor B-cell proteome, we identified a TP53-specific upregulation of proteins associated with extracellular vesicles (EVs). We abrogated EV biogenesis in tumor B-cells via clustered regularly interspaced short palindromic repeats (CRISPR)-knockout (KO) of RAB27A and confirmed that the EVs from TP53-deleted lymphoma cells were responsible for the reduced phagocytic capacity and the in vivo CIT resistance. Furthermore, we observed that TP53 loss led to an upregulation of both PD-L1 cell surface expression and secretion of EVs by lymphoma cells. Disruption of EV bound PD-L1 by anti-PD-L1 antibodies or PD-L1 CRISPR-KO improved macrophage phagocytic capacity and in vivo therapy response. Thus, we demonstrate enhanced EV release and increased PD-L1 expression in TP53-deficient B-cell lymphomas as novel mechanisms of macrophage function alteration in CIT resistance. This study indicates the use of checkpoint inhibition in the combination treatment of B-cell malignancies with TP53 loss., (© 2022 by The American Society of Hematology.)
- Published
- 2022
- Full Text
- View/download PDF
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