45 results on '"Mehmet Ali Gul"'
Search Results
2. High Fetuin-A Levels in Children with Celiac Disease
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Nezahat Kurt, Fatma Betul Ozgeris, Burcu Volkan, Mehmet Ali Gul, and Atilla Cayir
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Medicine (General) ,R5-920 - Published
- 2022
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3. Exogenous ATP administration prevents ischemia/reperfusion-induced oxidative stress and tissue injury by modulation of hypoxanthine metabolic pathway in rat ovary
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Serkan Kumbasar, Nihal Cetin, Omer Erkan Yapca, Ebru Sener, Unal Isaoglu, ehmet Yilmaz, Suleyman Salman, Ayse Nur Aksoy, Mehmet Ali Gul, and Halis Suleyman
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metabolismo oxidativo da xantina ,isquemia/reperfusão ,antioxidante ,rato ,Agriculture ,Agriculture (General) ,S1-972 - Abstract
In this study, xanthine oxidase (XO), malondialdehyde (MDA), myeloperoxidase (MPO) and glutathione (GSH) levels in the ovarian tissues of rats during the development of ischemia and postischemia-induced reperfusion were investigated, and the effect of ATP on ischemia-reperfusion (I/R) damage was biochemically and histopathologically examined. The results of the biochemical analyses demonstrated that ATP significantly reduced the level of XO and MDA and increased the amount of GSH in both ischemia and I/R-applied ovarian tissue at the doses administered. Furthermore, ATP significantly suppressed the increase in MPO activity that occurred following the application of post ischemia reperfusion in the ovarian tissue. The biochemical results obtained in the present study coincide with the histological findings. The severity of the pathological findings, such as dilatation, congestion, haemorrhage, oedema and polymorphonuclear nuclear leukocytes (PMNLs), increased in parallel with the increase observed in the products of XO metabolism. In conclusion, exogenously applied ATP prevented I/R damage by reducing the formation of XO in ischemic ovarian tissue.
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- 2014
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4. The effect of exercise in some sport branches on urinary second messenger cyclic nucleotide levels
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Ebubekir Bakan, Nurcan Kilic Baygutalp, Nurinnisa Ozturk, Omer Kaynar, Mehmet Ali Gul, Emrullah Dorman, and Nezahat Kurt
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exercise ,urinary camp ,urinary cgmp ,Medicine - Abstract
In this study, the possible effects of exercise on hormonal secretions in some sport branches were investigated on the basis of urinary cyclic nucleotide (cAMP and cGMP) excretion, since it was thought that the total, ultimate effects of secreted hormones, under the effect of exercise stress, may be estimated by means of the changes in the second messenger, cAMP, and cGMP, concentrations in urine. A total of 60 subjects from different sport branches were included in the study, and pre- and post-training urinary cyclic nucleotide levels of them were determined by EIA method. The differences in cAMP and cGMP between pre-training and post-training periods were statistically significant (p
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- 2016
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5. The use of incisional negative-pressure wound therapy on high-risk patients with breast cancer after mastectomy
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Ebru Esen, Sevket Baris Morkavuk, Mujdat Turan, Simay Akyuz, Sumeyra Guler, Gokhan Giray Akgul, Ibrahim Burak Bahcecioglu, Mehmet Ali Gulcelik, and Kerim Bora Yilmaz
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Breast cancer ,Seroma ,Wound complications ,Incisional negative pressure wound therapy ,iNPWT ,Surgery ,RD1-811 - Abstract
Background: The main complications seen in patients who have undergone modified radical mastectomy (MRM) are seroma, surgical site infection, hematoma, wound dehiscence, flap necrosis, and nerve damage. While these complications lead to some problems the most feared effect in the early period is that they cause a delay in adjuvant treatment. Incisional Negative Pressure Wound Therapy (iNPWT) decreases wound dehiscence by reducing oedema and tension, especially in the incision line. This study aim to compare recovery times and wound site complications between patients treated with conventional wound dressings and patients treated with iNPWT after MRM. Methods: A retrospective screening was made of the data of 50 patients who underwent MRM because of breast cancer in the General Surgery Clinic of XXX Hospital between 2018 and 2022, and were at high-risk of wound site complications. Two groups were formed as 30 patients applied with iNPWT and 20 patients applied with conventional dressings. Results: The mean age of the 50 female patients was 53.58 years (range, 30–80 years). The most frequently seen complications were seroma (20 patients) and partial flap ischaemia (14 patients). The mean number of iNPWT applications was 1.30 (range, 1–2), and the mean number of days of application was 4.47 (range, 2–9). Postoperative seroma was observed in 8 patients in the iNPWT group and in 12 patients in the conventional dressings group (p = 0.018). Flap ischaemia and the probability of dehiscence was determined at a statistically significantly higher rate in the patients in the conventional dressings groups (p = 0.005, p = 0.021). Conclusion: The results of this study demonstrated that the use of iNPWT significantly reduced the amount of postoperative drainage, thereby contributing to early drain removal. Furthermore, iNPWT significantly reduced postoperative seroma, flap ischaemia, and flap dehiscence compared to conventional dressings.
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- 2025
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6. Rare Breast Emergency: A Case of Necrotizing Fasciitis of the Breast in a Lactating Patient
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Gökhan Giray Akgül, Sümeyra Güler, Simay Akyüz, Duygu Bayram, İbrahim Burak Bahçecioğlu, Müjdat Turan, Hikmet Erhan Güven, Mehmet Ali Gülçelik, and Kerim Bora Yılmaz
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necrotising fasciitis ,lactation ,bioactive wound dressings ,negative pressure wound therapy ,split thickness skin graft ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Medicine - Abstract
Necrotizing fasciitis is a rare but potentially lethal infection of the skin and soft tissue, commonly seen in the perianal and gluteal regions. Concomitant diabetes is a predisposing factor. Primary necrotizing fasciitis of the breast is rare in healthy women. In this article, we present a very rare case of breast necrotizing fasciitis in the context of the literature. We report the case of a 35-year-old female patient who had given birth two months prior to admission and developed necrotizing fasciitis of the breast during lactation. The patient presented to the emergency department with sepsis. Examination revealed widespread erythema, dark discoloration, edema, and necrotic areas indicative of wet gangrene and crepitation in the left breast. Necrotizing fasciitis is a rapid and aggressive disease that can be fatal, and delayed diagnosis may unfortunately result in death. Therefore, careful evaluation of all suspected cases, especially for patients with risk factors, is crucial for early diagnosis and timely treatment. This case highlights the importance of recognizing necrotizing fasciitis of the breast in lactating women to ensure prompt and appropriate management, potentially saving lives.
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- 2024
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7. Bioinformatic Investigation of Genetic Changes in Paraoxonase Genes in Breast Cancer and Breast Cancer Subtypes
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Durmuş Ayan, Mehmet Ali Gül, Umut Karabay, and Seyyid Mehmet Bulut
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breast cancer ,paraoxonase ,bioinformatics ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Medicine - Abstract
Objective: Among women, breast cancer (BC) is the most prevalent form of cancer. Many molecular targets have been discovered for BC prognosis and treatment. However, new markers still need to be identified, as cancer pathogenesis is triggered by different mechanisms. The aim of this study was to examine the changes in the paraoxonase genes (PON1, PON2, and PON 3) involved in the pathogenesis of BC. Materials and Methods: The characteristics of the mutations were evaluated with the Cbioportal database. Kaplan-Meier Plot evaluated recurrence-free survival (RFS). The UALCAN database determined the promoter methylation. Gene expression was evaluated by GEPIA2.0 database. Results: PON1 harbored the most mutations. There was a significant decrease in PON3 expression levels in BC samples compared with healthy samples. PON1 and PON2 expression levels did not differ between BC tissue and normal adjacent tissue. Elevated expression levels of PON1 and PON2 genes were correlated with longer RFS, whereas reduced expression of the PON2 gene showed an association with longer RFS. Moreover, the promoter regions of PON1 and PON 3 were found to be hypermethylated, while the promoter region of PON 2 was found to be hypomethylated. The PON3 promoter region was significantly hypermethylated in luminal and human epidermal growth factor receptor 2 (HER2) + BC subtypes. However, the PON3 promoter region was significantly hypomethylated in the triple negative breast cancer (TNBC) subtype. Conclusion: These results suggest that methylation and expression status of PON3 in BC and BC subtypes (TNBC, luminal and HER2) may indicate a poor prognosis. The PON3 gene could be a negative prognostic marker in BC. However, the results should be supported by prospective studies.
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- 2024
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8. Effects of exercise on serum ischemia-modified albumin, brain natriuretic peptide and copeptin levels in boxers and kick boxers
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Hikmet Memmedov, Ebubekir Bakan, Nurinnisa Ozturk, Nurcan Kılıc Baygutalp, Omer Kaynar, Mehmet Ali Gul, Abdulsamed Kaya, Fatih Kıyıcı, and Ahmet Gokhan Yazıcı
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Male ,Natriuretic Peptide, Brain ,Humans ,Serum Albumin, Human ,Biomarkers ,Serum Albumin ,Brain injuries ,traumatic ,exercise therapy ,natriuretic peptide ,brain - Abstract
Introduction:boxing and kick boxing are combat sports that can cause severe head, neck, face and hand injuries during fighting. Then, traumatic brain injury (TBI) incidence is high in these sports. Ischemia-modified albumin (IMA), brain natriuretic peptide (BNP) and copeptin have diagnostic and prognostic value for cardiac and non-cardiac ischemic events. The purpose of this study is to evaluate exercise-induced variations of serum IMA, BNP and copeptin. Methods:twenty male boxers, twenty-three male kick-boxers and twenty-three age-matched male were enrolled in the study. Health assessment data were analysed. Boxers and kick-boxers underwent an exercise program including training plus fighting matches. Serum samples were collected in the pre- and post-exercise periods. Serum IMA, BNP and copeptin concentrations were measured in these specimens using ELISA reagents. Results:comparative analysis of analytes before and after exercise showed that exercise significantly increased serum IMA, BNP and copeptin levels both in boxers and kick-boxers. Conclusion:in conclusion, IMA, BNP and copeptin levels may be candidate biomarkers for exercise-related traumatic brain injuries. The identification of new biomarkers in patients with acute and chronic neurological disorders is of considerable interest to clinicians. Then, further studies should be conducted to evaluate the possible role of IMA, BNP and copeptin in TBI pathophysiology.
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- 2020
9. A Case of Concomitant Diffuse Sclerosing Variant of Papillary Thyroid Carcinoma and Graves’ Disease with Ophthalmopathy Appeared After Coronavirus Disease 2019 Vaccine
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Şafak Akın, Müjdat Turan, Gülçin Güler Şimşek, Mehmet Ali Gülçelik, and Neşe Ersöz Gülçelik
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Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Published
- 2024
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10. Immune checkpoint status and exhaustion‐related phenotypes of CD8+ T cells from the tumor‐draining regional lymph nodes in breast cancer
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Izel Yilmaz, Ece Tavukcuoglu, Utku Horzum, Kerim Bora Yilmaz, Melih Akinci, Mehmet Ali Gulcelik, Haluk Barbaros Oral, and Gunes Esendagli
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breast cancer ,cancer biology ,microenvironment ,surgical oncology ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background Functional status of T cells determines the responsiveness of cancer patients to immunotherapeutic interventions. Even though T cell‐mediated immunity is inaugurated in the tumor‐adjacent lymph nodes, peripheral blood has been routinely sampled for testing the immunological assays. The purpose of this study is to determine the immune checkpoint molecule expression and the exhaustion‐related phenotype of cytotoxic T cells in the regional lymph nodes from breast cancer patients. Patients and methods Multicolor immunophenotyping was used to determine the expression of PD‐1, TIM‐3, LAG3, CTLA‐4, CCR7, CD45RO, CD127, CD25, CXCR5, and ICOS molecules on CD3+CD4−CD56−CD8+ cytotoxic T cells freshly obtained from the lymph nodes and the peripheral blood samples of the breast cancer patients. The results were assessed together with the clinical data. Results A population of cytotoxic T cells was noted with high PD‐1 and CXCR5 expression in the lymph nodes of the breast cancer patients. Co‐expression of PD‐1, CXCR5, TIM‐3, and ICOS indicated a follicular helper T cell (Tfh)‐like, exhaustion‐related immunophenotype in these cytotoxic T cells. Only a minor population with CTLA‐4 and LAG3 expression was noted. The PD‐1+CXCR5+ cytotoxic T cells largely displayed CD45RO+CCR7+ central memory markers. The amount of CXCR5‐expressing PD‐1− cytotoxic T cells was elevated in the lymph nodes of the patients. Conclusion The regional lymph nodes of breast cancer patients harbor Tfh‐like exhausted cytotoxic T lymphocytes with high PD‐1 and TIM‐3 checkpoint molecule expression. The immunological conditions in the regional lymph nodes should be implicated for immune checkpoint immunotherapy (ICI) of cancer.
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- 2023
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11. The effect of restorative materials on cytokines in gingival crevicular fluid
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Mehmet Ali Gul, Neslihan Celik, Nilgün Seven, and Seda Askin
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Adult ,Male ,medicine.medical_treatment ,Dentistry ,Enzyme-Linked Immunosorbent Assay ,02 engineering and technology ,Composite Resins ,Dental Amalgam ,Crevicular fluid ,Dental Materials ,03 medical and health sciences ,0302 clinical medicine ,Materials Testing ,medicine ,Humans ,Interleukin 8 ,Dental Restoration, Permanent ,Interleukin 6 ,General Dentistry ,Rank correlation ,Enamel paint ,biology ,Compomers ,Interleukin-6 ,Tumor Necrosis Factor-alpha ,business.industry ,Monocyte ,Interleukin-8 ,Gingival Crevicular Fluid ,030206 dentistry ,Cell Biology ,General Medicine ,021001 nanoscience & nanotechnology ,medicine.anatomical_structure ,Cytokine ,Otorhinolaryngology ,Glass Ionomer Cements ,visual_art ,visual_art.visual_art_medium ,Mann–Whitney U test ,biology.protein ,Cytokines ,Female ,0210 nano-technology ,business - Abstract
Objective Composition of the restorative materials may cause inflammatory responses by monocyte activation and changes in the levels of cytokine released from different cells. Interleukin-6 (IL-6), interleukin-8 (IL-8) and Tumor necrosis factor alpha (TNF-α) are important cytokine for evaluating of the inflammatory process. The aim of this study was to evaluate the different restorative materials used in class V cavities effect on gingival crevicular fluid inflammatory cytokine levels. Design 60 individuals having Class V carious cavities participated in the study. Cavities were restored with FiltekZ250, DyractXP, Fuji IX, Cavex avalloy restorative materials. Changes in clinical and biochemical parameters were evaluated before restorations, seven and 21 days after restorations. Contralateral tooth intact enamel surface was determined as control side. Periotron8000 device was used for detection of GCF volume. Cytokine level of GCF was evaluated by Human ELISA kits. Data were analyzed using Mann-Whitney U test and Wilcoxon signed ranks test. The correlations between clinical parameters and biochemical parameters were examined by Spearman's rank correlation analysis. Results After restorative treatments PI and GI scores were decreased compared with baseline evaluations. There was a significant difference in GCF levels between experimental and control sites in all groups. GCF IL-6 levels in all groups except Filtek Z250, GCF IL-8 levels in all groups except Fuji IX, GCF TNF-α level in only Fuji IX showed significant differences between experimental and control sites. Conclusions The obtained data supported that all of the tested materials caused changes in GCF cytokine levels.
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- 2017
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12. Design Methods of Aluminium Pin-Ended Columns with Topology-Optimised Cross-Sections
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Mehmet Ali Güler, Aykut Artac, Bora Yildirim, and Konstantinos Daniel Tsavdaridis
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aluminium ,columns ,FE analysis ,topology optimisation ,DSM ,CSM ,Building construction ,TH1-9745 - Abstract
This paper presents a numerical study of topology-optimised pin-end aluminium alloy columns using finite element analysis (FEA). The FEA models integrate geometric imperfections and material nonlinearity, and are validated against experimental findings from the existing literature. ABAQUS v.6.15 (release 2020) is used in preparing the FEA models and obtaining the analysis results. Furthermore, modern design methodologies including Eurocode 9, the direct strength method (DSM), and the continuous strength method (CSM) are employed to assess the maximum load capacity of such columns. Parametric investigations encompass diverse parameters such as varied cross-sections, column lengths, and global and local imperfections. By analysing a total of 288 FE models, incorporating 16 column cross-sections across two lengths with nine distinct imperfections, this study compares results with those derived from modern design methodologies. Thus, this research elucidates the behaviour of novel cross-sections and the application of contemporary design techniques in their analysis.
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- 2024
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13. Adaptation of the professionalism mini-evaluation exercise instrument into Turkish: a validity and reliability study
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Ali İhsan Taşçı, Esra Akdeniz, Mehmet Ali Gülpınar, Yavuz Onur Danacıoğlu, Emine Ergül Sarı, Levent Yaşar, Faruk Karandere, and Sina Ferahman
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Medical professionalism ,Residency ,Education ,Educational measurement ,Special aspects of education ,LC8-6691 ,Medicine - Abstract
Abstract Background There is an ongoing search for standardized scales appropriate for each culture to evaluate professionalism, which is one of the basic competencies of a physician. The Professionalism Mini-evaluation Exercise (P-MEX) instrument was originally developed in Canada to meet this need. In this study, it was aimed to adapt the P-MEX to Turkish and to evaluate the validity and reliability of the Turkish version. Methods A total of 58 residents at Bakirkoy Dr. Sadi Konuk Training and Research Hospital were assessed with the Turkish version of P-MEX by 24 raters consisting of faculty members, attending physicians, peer residents, and nurses during patient room visits, outpatient clinic and group practices. For construct validity, the confirmatory factor analysis was performed. For reliability, Cronbach’s alpha scores were calculated. Generalizibility and decision studies were undertaken to predict the reliability of the validated tool under different conditions. After the administration of P-MEX was completed, the participants were asked to provide feedback on the acceptability, feasibility, and educational impact of the instrument. Results A total of 696 forms were obtained from the administration of P-MEX. The content validity of P-MEX was found to be appropriate by the faculty members. In the confirmatory factor analysis of the original structure of the 24-item Turkish scale, the goodness-of-fit parameters were calculated as follows: CFI = 0.675, TLI = 0.604, and RMSEA = 0.089. In the second stage, the factors on which the items loaded were changed without removing any item, and the model was modified. For the modified model, the CFI, TLI, and RMSEA values were calculated as 0.857, 0.834, and 0.057, respectively. The decision study on the results obtained from the use of P-MEX in a Turkish population revealed the necessity to perform this evaluation 18 times to correctly evaluate professionalism with this instrument. Cronbach’s alpha score was 0.844. All the faculty members provided positive feedback on the acceptability, feasibility, and educational impact of the adapted P-MEX. Conclusion The findings of this study showed that the Turkish version of P-MEX had sufficient validity and reliability in assessing professionalism among residents. Similarly, the acceptability and feasibility of the instrument were found to be high, and it had a positive impact on education. Trial registration 2020/249, Bakirkoy Dr. Sadi Konuk Training and Research Hospital.
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- 2023
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14. Calcined schist as promising ordinary Portland cement substitution: C3
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Pozhhan Mokhtari, Kosar Hassannezhad, Sorour Semsari Parapari, Yasemin Akyol, Mehmet Ali Gülgün, and Waltraud M. Kriven
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calcined schist ,carbonate ,cement substitute ,pozzalanic activity ,pozzolanicity ,Clay industries. Ceramics. Glass ,TP785-869 - Abstract
Abstract An effective method to make cement and concrete more sustainable is to blend them with the proper supplementary cementitious materials (SCMs). This study evaluates a pair of schist‐type materials with slightly different phase compositions, as a partial replacement for ordinary Portland cement (OPC). Materials received from several mines in ground powder form were studied by X‐ray diffraction, thermogravimetric analysis (TGA), and scanning electron microscopy. According to the TGA results, the activation procedures for the candidate SCMs were determined. The as‐received powders were heat treated in three different decomposition regimes (30%, 50%, and 80% of the total weight losses during thermal decomposition). These regimes corresponded to the activation level of the potential SCMs due to the de‐hydroxylation of the clay‐type minerals within them. Pozzolanic reactivity (pozzolanicity) of untreated as well as treated powders were estimated via electrical conductivity measurements in saturated calcium hydroxide solution. Blended cement pastes with 30 wt.% of OPC substituted with calcined clay‐type materials have developed mechanical properties equal to those of pure cement (100 wt.% OPC) paste after 28 days of hydration time. Two blended cement pastes prepared with candidate SCMs were compared to 100% OPC and OPC composite paste with metakaolin, which is regarded in the literature as a standard.
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- 2024
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15. Optimization of Ca/Si ratio in schists to enhance the pozzolanic supplementary cementitious material for OPC blending
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Pozhhan Mokhtari, Kosar Hassannezhad, Zeynep Basaran Bundur, Sezen Donmez, Mehmet Ali Gulgun, and Waltraud M. Kriven
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calcined carbonate ,calcined schist ,cement substitute ,compressive strength ,Clay industries. Ceramics. Glass ,TP785-869 - Abstract
Abstract Supplementary cementitious materials (SCMs) are partial substitutes for ordinary Portland cement (OPC) to reduce cost, the production of carbon dioxide (CO2), and fossil fuel consumption. Recent studies illustrated the effectiveness of calcined kaolinite clay as a proper partial replacement for OPC. Hence, schist‐type materials containing sufficient clay contents are regarded as promising candidates for OPC replacement. This study focuses on the possible use of activated calcium carbonates (CaCO3) to augment pozzolanic reactions of schists as a substitute for OPC. The use of activated calcium carbonates proved to be successful in expediting pozzolanic reactions and facilitating the formation of additional calcium aluminosilicate hydrate (C‐A‐S‐H). In this study, the optimal strength performance for blended cement was achieved by adjusting the total carbonate content to 30 wt.% of the schist. The decision to introduce carbonate to the schist was guided by calculations determining the need for an excess of calcium ions to fully harness the potential for C‐A‐S‐H formation. Virgin and augmented schists were activated by up to 80% of their respective potentials by heat treatment. Phase content and decomposition behavior of the active components were investigated by thermogravimetric analysis (TGA), x‐ray diffraction (XRD), and scanning electron microscopy (SEM). Cement paste samples incorporating 30 wt.% replacement of OPC with activated schist SCMs were prepared. The phase distribution and compressive strengths of these samples were assessed at hydration intervals of 2, 7, 28, 50, and 90 days. Cement formulations with activated calcium‐augmented SCMs exhibited compressive strength values at 109%, 101%, 96%, 95%, and 94% compared to pure cement paste at 2, 7, 28, 50, and 90 days, respectively. These values surpassed 90% of the compressive strength of pure OPC at equivalent hydration time points.
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- 2024
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16. The Frequency of Some Thrombophilic Mutations in Eastern Turkey
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Nurinnisa Ozturk, Engin Şebin, Ahmet Kiziltunc, Nuri Bakan, Mehmet Ali Gul, and Ebubekir Bakan
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0301 basic medicine ,Genetics ,Mutation ,biology ,Factor V ,Single-nucleotide polymorphism ,General Medicine ,Thrombophilia ,medicine.disease ,medicine.disease_cause ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,030220 oncology & carcinogenesis ,Methylenetetrahydrofolate reductase ,Genotype ,medicine ,biology.protein ,Original Article ,Allele ,Mutation frequency - Abstract
Factor V / Factor II / Methylenetetrahydrofolate reductase, gene polymorphisms are closely associated with thrombophilia. Regional frequencies of these mutations may show a characteristic state. The aim of our study was to evaluate the frequency of commonly seen Factor V / Factor II / Methylenetetrahydrofolate reductase gene polymorphisms in Eastern Turkey.In 433 patients sent to the laboratory with the suspicion of thrombophilia, using whole blood samples, an automated Nucleic Acid Test was used for mutation determinations in Verigene System. The kit module was designed to detect the Factor V G1691A / Factor II G20210A / Methylenetetrahydrofolate reductase gene C677T single nucleotide polymorphisms.In 433 patients, 8.7% for Factor V G1691A polymorphisms were heterozygous genotype, 3.9% for Factor II G20210A polymorphisms were heterozygous genotype, and 43.9% for methylenetetrahydrofolate reductase 677CT polymorphisms were heterozygous genotype and 3.0% homozygous mutation genotype.Detection of these commonly seen Factor V / Factor II / Methylenetetrahydrofolate reductase single nucleotide polymorphisms can help to identify patients in high risk group and to evaluate the interaction of genetic and acquired risk factors. Our findings suggest that commonly seen thrombophilic allele mutation frequency in our region is the same as the data reported in the literature.Faktör V / Faktör II / Metilen tetrahidrofolat redüktaz, gen polimorfizmleri trombofili ile yakın ilişkilidir. Bu polimorfizmlerin bölgesel görülme sıklıkları farklılıklar gösterebilmektedir. Çalışmamızın amacı Faktör V / Faktör II / Metilen tetrahidrofolat redüktaz genlerinin en sık görülen tek nükleotid polimorfizmlerinin bölgemiz için görülme sıklığını değerlendirmektir.Trombofili şüphesi ile laboratuvarımızda çalışılan, toplam 433 hasta sonucu değerlendirildi. İlgili polimorfizmlerin belirlenmesi için tam kan numuneleri kullanılarak Verigene Sistem için tasarlanan otomatik nükleik asit testi kullanıldı. Kit modülü en sık görülen Factör V G1691A) / Faktör II G20210A / Metilen tetrahidrofolat redüktaz C677T, tek nükleotid polimorfizmlerini tespit etmek için dizayn edilmiştir.Çalışmamız sonucunda Faktör V G1691A polimorfizmi için %8,7 oranında heterozigot genotip, Faktör II G20210A polimorfizmi için %3,9 oranında heterozigot genotip ve metilen tetrahidrofolat redüktaz C677T polimorfizmi için %43,9 oranında heterozigot, %3,0 oranında kişinin homozigot mutant genotip taşıdıkları belirlendi.Faktör V / Faktör II / metilenetetrahidrofolat redüktaz genlerinin sık görülen tek nükleotid polimorfizmlerinin tespiti ile tromboz riski yüksek hastalar belirlenebilir ve genetik ve edinsel risk faktörlerin etkileşimi değerlendirilebilir. Çalışmamızın sonucunda, sık görülen trombofilik allel mutasyonlarının görülme sıklıklarının bölgemize özgü bir dağılım frekansı göstermediğini söyleyebiliriz.
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- 2016
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17. Evaluation of the analytical performances of Cobas 6500 and Sysmex UN series automated urinalysis systems with manual microscopic particle counting
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Zafer Bayraktutan, Ebubekir Bakan, Mehmet Ali Gul, Fatma Zuhal Umudum, Nuri Bakan, and Nurcan Kilic Baygutalp
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030213 general clinical medicine ,Microscopy ,Autoanalysis ,Urinalysis ,medicine.diagnostic_test ,business.industry ,urinalysis ,Biochemistry (medical) ,Clinical Biochemistry ,Analyser ,Statistics as Topic ,Urine ,030204 cardiovascular system & hematology ,Original Papers ,manual microscopy ,03 medical and health sciences ,0302 clinical medicine ,automated urinalysis ,medicine ,Urine sediment ,Humans ,Nuclear medicine ,business - Abstract
Introduction Automated urinalysis systems are valuable tools in clinical laboratories, especially those with a high work load. The objective of this study was to compare the analytical performance of Sysmex UN series urine analyser, which may become a new one in our laboratory, with the Cobas 6500 automated urine analyser, which is used in our laboratory for a long time. For comparisons, manual microscopical examination was accepted as reference method. Materials and methods A total of 470 urine samples were tested in the two automated urinalysis systems, and urine sediment testing with manual microscopy was applied to a 100 pathological samples of the total 470. The diagnostic performance of the two automated urine analysers was compared with each other and manual microscopy. Results Differences were determined between automated and manual microscopy in some pathological samples. The resultant regression equations were as follows. Comparison of Cobas U701 with Sysmex UF-5000: y = - 0.57 (- 0.85 to - 0.29) + 0.95 (0.92 to 0.99) x for RBC, and y = - 0.11 (- 0.54 to 0.29) + 0.89 (0.84 to 0.98) x for WBC; comparison of Cobas U701 with manual microscopy: y = - 0.45 (- 0.85 to 0.21) + 1.00 (0.92 to 1.07) x for WBC; and comparison of Sysmex UF-5000 with manual microscopy: y = - 0.74 (- 1.09 to - 0.57) + 0.87 (0.85 to 0.91) x for WBC. Conclusions We can conclude that the new Sysmex UN series urine analyser can be safely used in our laboratory. Although the results showed good to moderate concordance, the microscopy results of the automated platforms should be confirmed by manual microscopy, particularly in pathological samples.
- Published
- 2018
18. The Evaluation of Serum Copeptin Levels and Some Commonly Seen Thrombophilic Mutation Prevalence in Acute Pulmonary Embolism
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Mehmet Ali Gul, Nurinnisa Ozturk, Harun Polat, Ebubekir Bakan, Ozge Nur Gunes, Atif Bayramoglu, Nurcan Kilic Baygutalp, and Sahin Aslan
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Male ,Heterozygote ,medicine.medical_specialty ,Single-nucleotide polymorphism ,030204 cardiovascular system & hematology ,medicine.disease_cause ,Biochemistry ,Gastroenterology ,03 medical and health sciences ,0302 clinical medicine ,Copeptin ,Internal medicine ,Prevalence ,Genetics ,medicine ,Factor V Leiden ,Humans ,030212 general & internal medicine ,Molecular Biology ,Methylenetetrahydrofolate Reductase (NADPH2) ,Ecology, Evolution, Behavior and Systematics ,Aged ,Aged, 80 and over ,Mutation ,biology ,Glycopeptides ,Factor V ,Heterozygote advantage ,General Medicine ,Middle Aged ,medicine.disease ,Pulmonary embolism ,Immunology ,biology.protein ,Biomarker (medicine) ,Female ,Prothrombin ,Pulmonary Embolism - Abstract
Acute pulmonary embolism (PE) is a common, emergent condition and may affect a large number of patients. Copeptin has been indicated to be a sensitive biomarker of arginine vasopressin release, and has diagnostic and prognostic value in various clinical conditions. Genetic mutations are considerable components of thrombophilic diseases, and factor II gene G20210A, (FII20210A), factor V Leiden (FVL, G1691A) and methylenetetrahydrofolate reductase gene C677T (MTHFR677T) single nucleotide polymorphisms are the most common mutations of thrombophilic diseases. In this study, serum copeptin levels were determined in patients with PE and healthy controls, and the results were discussed. The prevalence of some commonly seen thrombophilic mutations was also evaluated in patients with PE. The study included 32 patients (18 male, 14 female) with PE and 24 (13 male, 11 female) age- and gender-matched healthy controls. A significant difference in serum copeptin levels was determined between the patient and control groups (8.58 ± 4.42 and 4.07 ± 1.02 pmol/L, respectively). Heterozygous mutant genotype for FII20210A and heterozygous mutant genotype for FVL were observed in 3.1 and 9.4% of patients, respectively. Mutant genotype of 49% was determined for MTHFR677T mutations. It was concluded that copeptin may have diagnostic value for PE.
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- 2016
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19. High Prevalence of Thyroid Disorders in Pregnant Women in A Region of Eastern Turkey
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Harun Polat, Mehmet Ali Gul, Ebubekir Bakan, Nuri Bakan, Canan Yigit, Nurinnisa Ozturk, and Nurcan Kilic Baygutalp
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Gynecology ,medicine.medical_specialty ,High prevalence ,medicine.anatomical_structure ,business.industry ,Thyroid ,Biomedical Engineering ,Medicine ,Bioengineering ,General Medicine ,business ,General Psychology - Published
- 2016
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20. The Role of Mammographic Breast Area/Microcalcification Cluster Area (BA/MCA) Ratio in the Classification of BI-RADS 4 Lesions: A Step for Development of Artificial Intelligence in Breast Cancer Patients
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Ibrahim Burak Bahçecioğlu, Şevket Barış Morkavuk, Şebnem Çimen, Müjdat Turan, Gökay Çetinkaya, and Mehmet Ali Gülçelik
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Medicine - Abstract
Conclusion: The increase in the ratio of MCA to BA might have a place in the differentiation of BI-RADS 4 lesions. We foresee that artificial intelligence could also have a place in the classification of BI-RADS lesions with software to be installed on the mammography computer.
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- 2024
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21. Evaluation of liver function by means of serum cytokeratin 18 and hepatocyte growth factor levels in patients with obstructive jaundice
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Mehmet Ali Gul, Sabri Selcuk Atamanalp, Nurhak Aksungur, Nuri Bakan, Serkan Cerrah, Ebubekir Bakan, Nurinnisa Ozturk, and Gurkan Ozturk
- Subjects
Adult ,Male ,medicine.medical_specialty ,Bilirubin ,Gastroenterology ,Severity of Illness Index ,Statistics, Nonparametric ,03 medical and health sciences ,chemistry.chemical_compound ,Cytokeratin ,0302 clinical medicine ,Liver Function Tests ,Reference Values ,White blood cell ,Internal medicine ,medicine ,Humans ,Aged ,Liver injury ,Aged, 80 and over ,Keratin-18 ,business.industry ,Hepatocyte Growth Factor ,Biopsy, Needle ,General Medicine ,Middle Aged ,medicine.disease ,Prognosis ,Immunohistochemistry ,Biliary Tract Surgical Procedures ,Jaundice, Obstructive ,medicine.anatomical_structure ,chemistry ,Biliary tract ,030220 oncology & carcinogenesis ,Case-Control Studies ,Alkaline phosphatase ,030211 gastroenterology & hepatology ,Surgery ,Hepatocyte growth factor ,Female ,Liver function ,business ,Biomarkers ,medicine.drug - Abstract
Objective To evaluate the serum levels of cytokeratin 18 (CK18) and hepatocyte growth factor (HGF) in obstructive jaundice patients before and after treatment and thereby to detect the possible role of CK18 and HGF in patients with obstructive jaundice. Patients and methods Forty patients who had obstructive jaundice and 40 healthy control subjects were included in the study. Patients were treated using percutaneous, endoscopic or surgical approaches. Blood samples were obtained at the day before and 7 days after the intervention for obstructive jaundice. Serum HGF and CK18 concentrations were determined by ELISA method. Results There were statistically significant decreases in HGF, CK18, total bilirubin and direct bilirubin serum levels, aspartate aminotransferase, alanine aminotransferase, gamma-glutamyltransferase, and alkaline phosphatase activities and white blood cell count when compared with pre-treatment levels. Conclusion Evaluating pre- and post-treatment serum HGF and CK18 levels suggested that there was an apoptosis in obstructive jaundice patients and this apoptosis decreased after the decompression of the biliary tract. We also demonstrated that HGF levels were altered at biliary obstruction compared to healthy controls and the levels of this biomarker also decreased after decompression of biliary obstruction. We concluded that these biomarkers can be used as predictors of liver injury in biliary obstruction.
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- 2017
22. Comparison of lymph node metastasis rates in breast cancer molecular subtypes; A retrospective clinical study
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Ebru Esen, Mehmet Saydam, Sumeyra Guler, Kerim Bora Yilmaz, Mujdat Turan, Pervin Demir, and Mehmet Ali Gulcelik
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breast cancer ,molecular subtypes ,luminal ,er status ,pr status ,her2 status ,Medicine - Abstract
Breast cancer is the most common cancer in women. Axillary lymph node metastasis in breast cancer is the most important determinant of long-term prognosis, but isn't an independent risk factor for overall survival. Invasive breast cancer is divided into molecular subtypes according to the presence of estrogen, progesterone and Her2 receptors: these subtypes can guide systemic therapy. Our aim in the study is to compare the axillary lymph node metastasis rates statistically in breast cancer subtypes. Patients treated for breast cancer were retrospectively evaluated in Group1(LuminalA-likeERand/orPR+,Her2 -), Group2 (LuminalB-likeER and/or PR+,Her2-), Group3 (Her2+,ER and/or PR+), Group4 (Her2+,ER and/or PR-) and Group5 (Her2-,ER and PR-) analyzed for tumor type, pathological stage, lymph node metastasis.208 patients were included in the study, and the mean age of the patients was 57.3±12.8. Although the age distribution of the groups was similar, no significant difference was found between the groups in terms of menopausal status. While the lymph node distribution was highly proliferative in Group 2. Demonstrating metastasis organotropisms in the effect of molecular subtypes of breast cancer is necessary to understand tumor mechanisms. ER and PR positive tumors usually metastasize to bones, while Her2+ or triple-negative breast cancers usually tend to metastasize to the visceral system, including the central nervous system. As with distant metastasis habits, lymph node metastasis rates of molecular subtypes of breast cancer can also vary. Being aware of these metastasis possibilities is also helpful in understanding the clinical behavior of the disease. It is important to know the molecular subtypes and susceptibility of lymphatic metastases as well as trying to avoid unnecessary complications of axillary dissection using the sentinel lymph node sampling technique. [Med-Science 2023; 12(1.000): 52-7]
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- 2023
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23. Serum endocan levels in patients with retinal vein occlusion
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Mustafa Yildirim, Orhan Baykal, Orhan Ates, Mehmet Ali Gul, Nurinnisa Ozturk, Osman Ondas, and Ibrahim Kocer
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medicine.medical_specialty ,Retinal Vein ,business.industry ,Ophthalmology ,Occlusion ,medicine ,In patient ,business - Published
- 2020
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24. Serum Amino Acid Levels in Children with Autism Spectrum Disorder by Liquid Chromatography-Mass Spectrometry/Mass Spectrometry
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Mehmet Ali Gül, Fatma Zuhal Umudum, Nezahat Kurt, Fatma Betül Özgeriş, Özge Nur Türkeri, Bahadır Turan, Onur Burak Dursun, and Mevlüt Sait Keleş
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Medicine - Published
- 2023
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25. Evaluation of the analytical performances of Cobas 6500 and Sysmex UN series automated urinalysis systems with manual microscopic particle counting
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Ebubekir Bakan, Zafer Bayraktutan, Nurcan Kilic Baygutalp, Mehmet Ali Gul, Fatma Zuhal Umudum, Nuri Bakan, Ebubekir Bakan, Zafer Bayraktutan, Nurcan Kilic Baygutalp, Mehmet Ali Gul, Fatma Zuhal Umudum, and Nuri Bakan
- Abstract
Introduction: Automated urinalysis systems are valuable tools in clinical laboratories, especially those with a high work load. The objective of this study was to compare the analytical performance of Sysmex UN series urine analyser, which may become a new one in our laboratory, with the Cobas 6500 automated urine analyser, which is used in our laboratory for a long time. For comparisons, manual microscopical examination was accepted as reference method. Materials and methods: A total of 470 urine samples were tested in the two automated urinalysis systems, and urine sediment testing with manual microscopy was applied to a 100 pathological samples of the total 470. The diagnostic performance of the two automated urine analysers was compared with each other and manual microscopy. Results: Differences were determined between automated and manual microscopy in some pathological samples. The resultant regression equations were as follows. Comparison of Cobas U701 with Sysmex UF-5000: y = - 0.57 (- 0.85 to - 0.29) + 0.95 (0.92 to 0.99) x for RBC, and y = - 0.11 (- 0.54 to 0.29) + 0.89 (0.84 to 0.98) x for WBC; comparison of Cobas U701 with manual microscopy: y = - 0.45 (- 0.85 to 0.21) + 1.00 (0.92 to 1.07) x for WBC; and comparison of Sysmex UF-5000 with manual microscopy: y = - 0.74 (- 1.09 to - 0.57) + 0.87 (0.85 to 0.91) x for WBC. Conclusions: We can conclude that the new Sysmex UN series urine analyser can be safely used in our laboratory. Although the results showed good to moderate concordance, the microscopy results of the automated platforms should be confirmed by manual microscopy, particularly in pathological samples.
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- 2018
26. The effect of exercise in some sport branches on urinary second messenger cyclic nucleotide levels
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Nezahat Kurt, Emrullah Dorman, Mehmet Ali Gul, Ömer Kaynar, Nurinnisa Ozturk, Nurcan Kilic Baygutalp, and Ebubekir Bakan
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0301 basic medicine ,medicine.medical_specialty ,Urinary system ,lcsh:Medicine ,Urine ,030204 cardiovascular system & hematology ,EIA method ,General Biochemistry, Genetics and Molecular Biology ,Excretion ,03 medical and health sciences ,Cyclic nucleotide ,chemistry.chemical_compound ,0302 clinical medicine ,Internal medicine ,medicine ,Applied Psychology ,urinary camp ,exercise ,business.industry ,lcsh:R ,Exercise stress ,urinary cgmp ,030104 developmental biology ,Endocrinology ,chemistry ,Second messenger system ,business ,Hormone - Abstract
In this study, the possible effects of exercise on hormonal secretions in some sport branches were investigated on the basis of urinary cyclic nucleotide (cAMP and cGMP) excretion, since it was thought that the total, ultimate effects of secreted hormones, under the effect of exercise stress, may be estimated by means of the changes in the second messenger, cAMP, and cGMP, concentrations in urine. A total of 60 subjects from different sport branches were included in the study, and pre- and post-training urinary cyclic nucleotide levels of them were determined by EIA method. The differences in cAMP and cGMP between pre-training and post-training periods were statistically significant (p
- Published
- 2016
27. Effect of Metakaolin and Lime on Strength Development of Blended Cement Paste
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Kosar Hassannezhad, Yasemin Akyol, Mehmet Can Dursun, Cleva W. Ow-Yang, and Mehmet Ali Gulgun
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SCM ,supplementary cementitious materials ,pozzolan ,schist ,metakaolin ,lime ,Building construction ,TH1-9745 - Abstract
To develop a more reactive pozzolan for supplementary cementitious materials (SCMs), the co-calcination of kaolinite and limestone was investigated for its contribution to hydration of blended cement. Kaolinite (with ~50 wt% quartz impurity) was calcined at 700 °C, and a mixture of kaolinite and limestone was calcined at 800 °C. These activated SCMs were added to ordinary Portland cement (OPC), replacing ca. 30 wt% of the OPC. The compressive strength of these blended cement paste samples was measured after 28 and 90 days, while the hydration products and microstructural development in these blended cement pastes were analyzed by X-ray diffraction (XRD), thermogravimetric analysis (TGA), and scanning electron microscopy (SEM). The results revealed that adding free lime to OPC, together with metakaolin, led to enhanced compressive strength. The compressive strength of this new blended cement paste reached 113% and 112% of the compressed strength of pure OPC paste after 28 and 90 days of hydration, respectively. Furthermore, this study showed that the improvement was due to the increased consumption of Portlandite (CH), the formation of calcium aluminosilicate hydrate (CASH), and the reduction of porosity in the sample containing free lime and metakaolin.
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- 2022
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28. Exogenous ATP administration prevents ischemia/reperfusion-induced oxidative stress and tissue injury by modulation of hypoxanthine metabolic pathway in rat ovary
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Omer Erkan Yapca, Ebru Sener, Halis Suleyman, Nihal Cetin, Serkan Kumbasar, Suleyman Salman, Unal Isaoglu, Mehmet Ali Gul, ehmet Yilmaz, Ayse Nur Aksoy, RTEÜ, Tıp Fakültesi, Cerrahi Tıp Bilimleri Bölümü, and Çetin, Nihal
- Subjects
medicine.medical_specialty ,antioxidant ,Ischemia ,Ovary ,Biology ,medicine.disease_cause ,ischemia/reperfusion injury ,lcsh:Agriculture ,chemistry.chemical_compound ,Internal medicine ,medicine ,rat ,lcsh:Agriculture (General) ,Xanthine oxidase ,Hypoxanthine ,General Veterinary ,antioxidante ,lcsh:S ,Glutathione ,medicine.disease ,Malondialdehyde ,lcsh:S1-972 ,medicine.anatomical_structure ,Endocrinology ,chemistry ,rato ,Myeloperoxidase ,biology.protein ,metabolismo oxidativo da xantina ,xanthine oxidase metabolism ,Animal Science and Zoology ,Agronomy and Crop Science ,isquemia/reperfusão ,Oxidative stress - Abstract
In this study, xanthine oxidase (XO), malondialdehyde (MDA), myeloperoxidase (MPO) and glutathione (GSH) levels in the ovarian tissues of rats during the development of ischemia and postischemia-induced reperfusion were investigated, and the effect of ATP on ischemia-reperfusion (I/R) damage was biochemically and histopathologically examined. The results of the biochemical analyses demonstrated that ATP significantly reduced the level of XO and MDA and increased the amount of GSH in both ischemia and I/R-applied ovarian tissue at the doses administered. Furthermore, ATP significantly suppressed the increase in MPO activity that occurred following the application of post ischemia reperfusion in the ovarian tissue. The biochemical results obtained in the present study coincide with the histological findings. The severity of the pathological findings, such as dilatation, congestion, haemorrhage, oedema and polymorphonuclear nuclear leukocytes (PMNLs), increased in parallel with the increase observed in the products of XO metabolism. In conclusion, exogenously applied ATP prevented I/R damage by reducing the formation of XO in ischemic ovarian tissue. Neste estudo, a xantina oxidase (XO), o malondialdeído (MDA), mieloperoxidase ( MPO ) e glutationa ( GSH) nos tecidos do ovário de ratos, durante o desenvolvimento de isquemia e reperfusão induzida por pós-isquemia foi investigada, e o efeito de ATP em isquemia e reperfusão (I/R). O dano foi verificado por provas bioquímicas e por histopatologia. Os resultados das análises bioquímicas mostraram que o ATP reduziu significativamente o nível de XO e MDA e aumentou a quantidade de GSH em ambas as isquemia e no tecido do ovário de I / R - aplicado nas doses administradas. Além disso, o ATP suprimiu significativamente o aumento na atividade de MPO que ocorreu na sequência da aplicação de pós-isquemia reperfusão no tecido ovariano. Os resultados bioquímicos obtidos no presente estudo coincidem com os achados histológicos. A gravidade dos achados patológicos, como a dilatação, congestão, hemorragia, edema e polimorfonucleares leucócitos nucleares (PMNLs), aumentou em paralelo com o aumento observado nos produtos do metabolismo XO. Em conclusão, aplicando exogenamente ATP impedido de I/R, houve danos pela redução da formação de tecido de ovário de XO na isquemia.
- Published
- 2014
29. Diffusion-Weighted Imaging of Solid Ovarian Masses: Is it Useful to Differentiate Benign From Malignant?
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Mehmet Ali GÜLTEKİN
- Subjects
apparent diffusion coefficient ,diffusion-weighted imaging ,solid ovarian mass ,Medicine - Abstract
Purpose: To research whether apparent diffusion coefficient (ADC) values of solid ovarian masses are beneficial for differentiation between benign and malignant. Materials and Methods: We analyzed 50 patients with 62 solid ovarian masses retrospectively. We divided the ovarian masses into two groups as benign and malignant. Thirteen patients with 13 solid ovarian masses were identified to have benign masses, while 37 patients with 49 solid ovarian masses were diagnosed with malignancy. The Mann-Whitney U test was used for the comparisons of the sizes and the ADC values of solid ovarian mass. Receiver-operating characteristic (ROC) curves were analyzed to determine a cutoff value for ADC to differentiate benign from malignant. Results: No significant differences were found between the two groups in terms of age (p=0.06), whole lesion size (p= 0.647), and solid component size (p=0.066). ADC values of the two groups were significantly different (p=0.015). Malignant solid ovarian lesions showed significantly lower ADC values than benign lesions. The ROC curves showed an area under the curve rate of 0.722 and a cutoff value of 886 x 10-6 mm2/s. Conclusion: Diffusion-weighted imaging is a useful method for differential diagnosis of solid ovarian masses. Lower ADC values of solid ovarian lesions indicate malignancy rather than benign lesions.
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- 2021
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30. Use of thiamine pyrophosphate to prevent infertility developing in rats undergoing unilateral ovariectomy and with ischemia reperfusion induced in the contralateral ovary
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Omer Erkan Yapca, Mehmet Ali Gul, Nihal Cetin, Mehmet Ibrahim Turan, and Bunyamin Borekci
- Subjects
Infertility ,medicine.medical_specialty ,Antioxidant ,medicine.medical_treatment ,Ovariectomy ,Ischemia ,Ovary ,medicine.disease_cause ,Antioxidants ,Melatonin ,chemistry.chemical_compound ,Random Allocation ,Internal medicine ,Medicine ,Animals ,Ovarian Diseases ,Rats, Wistar ,business.industry ,food and beverages ,Obstetrics and Gynecology ,Malondialdehyde ,medicine.disease ,Rats ,Disease Models, Animal ,Endocrinology ,medicine.anatomical_structure ,Reproductive Medicine ,chemistry ,Reperfusion Injury ,Vitamin B Complex ,Female ,Thiamine Pyrophosphate ,business ,Infertility, Female ,Thiamine pyrophosphate ,Oxidative stress ,medicine.drug - Abstract
Objective To investigate whether thiamine pyrophosphate can prevent infertility developing in rats undergoing unilateral ovariectomy and with ischemia reperfusion induced in the contralateral ovary. Biochemical examinations of the ovaries were also performed. Study design Rats were divided into two main groups of three subgroups each. An ischemia reperfusion model was established in the first main group, while surgical unilateral ovariectomy was performed in the second. Thiamine pyrophosphate and melatonin were administered to the subgroups. No additional procedure was performed in the control groups. The rats were then left in laboratory environments and their fertility levels were determined. Malondialdehyde, total glutathione and DNA damage products were measured in those rats from which ovarian tissue was collected. Results The results showed that thiamine pyrophosphate prevented ischemia/reperfusion injury-related infertility, but melatonin did not provide adequate prevention. However, reproduction in healthy animals receiving melatonin began earlier compared to those receiving thiamine pyrophosphate. Melatonin suppressed oxidative stress caused by ischemia/reperfusion in ovarian tissue significantly better than did thiamine pyrophosphate. Conclusions We think that different mechanisms, in addition to antioxidant activity, are involved in the prevention of reperfusion-associated infertility after ischemia.
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- 2013
31. Relationship between KRAS mutation and diffusion tensor imaging features in brain metastases due to colorectal cancer; preliminary study
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Mehmet Ali Gultekin, Haci Mehmet Turk, Temel Fatih Yilmaz, Abdusselim Adil Peker, Mehmet Besiroglu, Atakan Topcu, Ganime Coban, and Dilek Hacer Cesme
- Subjects
kirsten rat sarcoma gene mutation ,diffusion tensor imaging ,colorectal cancer ,brain metastasis ,Medicine - Abstract
Identifying Kirsten rat sarcoma (KRAS) mutation status is important for metastatic colorectal cancer treatment. Validating KRAS mutation profile on neuroimaging without histopathologic analysis would be beneficial. We aimed to differentiate Kirsten rat sarcoma (KRAS) gene mutation profile according to diffusion tensor imaging (DTI) metrics obtained from colorectal brain metastases (CRBM). Total of 8 patients with 17 CRBM included with known KRAS gene mutation status. All patients were categorized into two groups according to the KRAS mutation status as positive (+) (n: 5, 11 lesions) and negative (-) (wild type) (n: 3, 6 lesions). DTI values of the BMs were evaluated by consensus of two radiologists. Apparent diffusion coefficient (ADC), normalized apparent diffusion coefficient (nADC) and fractional anisotropy (FA) values of the two groups were compared. For comparison the Mann-Whitney U test was used. KRAS mutation (+) group showed significantly lower ADC and nADC values on CRBM rather than the wild-type. Comparison of the FA values of the two groups did not reveal any statistical significance. In conclusion, decreased ADC and nADC values of CRBM are correlated with presence of KRAS mutation. Lower ADC and nADC values obtained from CRBM can be utilized to insight KRAS mutation profile. [Med-Science 2021; 10(3.000): 886-9]
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- 2021
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32. New Findings on Autoimmune Etiology of Idiopathic Granulomatous Mastitis: Serum IL-17, IL-22 and IL-23 Levels of Patients
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Mehmet Saydam, Kerim Bora Yilmaz, Mutlu Sahin, Hamdullah Yanik, Melih Akinci, Ibrahim Yilmaz, Sener Balas, Cem Azili, and Mehmet Ali Gulcelik
- Subjects
interleukin-17 ,interleukin-22 ,interleukin-23 ,idiopathic granulomatous mastitis ,Surgery ,RD1-811 - Abstract
Background Idiopathic Granulomatous Mastitis (IGM) is a benign chronic inflammatory breast disease that mimics breast cancer, and the etiopathogenesis has not yet been fully evaluated. Autoimmunity has received the most focus as a possible etiology. Our aim in this prospective clinical study was to investigate the possible association between the cytokines, interleukin IL-17, IL-22, IL-23 and IGM. Materials and Methods The current study was conducted in 26 women with histopathologically diagnosed IGM, and 15 control women of reproductive age having no breast disease history. Blood samples were collected, and serum concentrations of IL-17, IL-22, and IL-23 were determined. Results In the analysis of variables, the patients with IGM and the control group had statistically significant differences between serum IL-22 titers (p = 0.0378) and IL-23 titers (p = 0.0469. No statistically significant difference was found between IGM patients and the control group in serum IL-17 titers (p = 0.9724). Conclusion The results of the current study, especially pertaining to serum IL-22 and IL-23 levels, support the etiopathogenesis of IGM in favor of the autoinflammatory thesis. Nevertheless, this thesis should be supported by a large case number and prospective clinical studies.
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- 2021
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33. Effect of the Exchanged Cation in an Algerian Montmorillonite Used as a Heterogeneous Catalyst for Biginelli Reaction
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Fatiha Belferdi, Farida Bouremmad, Shalima Shawuti, and Mehmet Ali Gulgun
- Subjects
montmorillonite ,heterogeneous catalyst ,biginelli reaction ,multi-component reactions (mcrs). ,Chemistry ,QD1-999 - Abstract
In this work, an Algerian montmorillonite (Mt) is exchanged by different cations from the transition metals family, namely: Cu2+, Ni2+, Cr3+, Co2+, Fe2+ and Fe3+, it is used as a heterogeneous catalyst for Biginelli reaction. The exchanged cations are known for their catalytic properties in homogeneous catalysis. The main purpose is to study the effect of the exchanged cations on the yield and the kinetics of the reaction. The characterization of montmorillonite was carried out by XRD, which allows us to follow the evolution of the basal spacing d001 as a function of the exchanged cation and to show that the exchange operation has not altered the montmorillonite structure. The cation exchange capacity (CEC) is determined by the titration of the exchanged cation by atomic absorption. The product of the reaction is characterized by NMR, IR and by the determination of the melting point. In addition, the importance of the introduction order of the reagents into the reaction medium has been demonstrated on the yield and the kinetics. Finally, the obtained results show that the exchanged montmorillonite is competitive with other costly heterogeneous and homogeneous catalysts.
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- 2021
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34. The effectiveness of cerebellar lesions on neurocognitive functions in children with neurofibromatosis Type 1: Diffusion tensor imaging features
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Dilek Hacer Cesme, Ahmet Kaya, Mehmet Ali Gultekin, Sinem Aydin, Turkan Uygur Sahin, Mekiya Filiz Toprak, and Alpay Alkan
- Subjects
neurofibromatosis type 1 ,cognitive functions ,diffusion tensor imaging ,fractional anisotropy ,mean diffusivity ,Medicine - Abstract
In children with Neurofibromatosis type 1 (NF1), hamartomatous lesions called FASI (focal areas of signal intensity) on brain MRI are common. The relationship between neurocognitive functions and the presence of cerebellar FASI in NF1 children is a controversial issue. Our aim in this study is to investigate whether there is a difference in fractional anisotropy (FA) and mean diffusivity (MD) values in children with NF1 with and without cerebellum FASI, and to analyze its effect on neurocognitive functions. Twenty-seven patients children were assessed using Diffusion Tensor Imaging (DTI) and MRI. According to MRI features, we classified children with NF1 as group 1 with FASI (n=14) in the cerebellum, group 2 without FASI (n=13). The WISC-R scale (a revised form of the Wechsler intelligence scale for children) was used to analyze cognitive functions. MD and FA values were measured from cerebellar FASI and white matter. The relationship between neurocognitive function test scores and FA and MD values was investigated. There was a significant difference between group 1 and group 2 in terms of MD and FA values of the cerebellum. Verbal and performance test scores were lower in group 1 and group 2. The MD values obtained from the cerebellum were positively correlated with the full-scale intelligence quotient (IQ), Verbal IQ, and Performance IQ. There was a significant difference between group 1 and group 2 in terms of information, vocabulary, digit span, picture arrangement. DTI changes in the cerebellum are associated with demyelination and loss of axonal integrity in the white matter pathways responsible for some neurocognitive functions. We think that the presence of cerebellar FASI in children with NF1 does not contribute to the severity of neurocognitive impairment. [Med-Science 2021; 10(2.000): 506-10]
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- 2021
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35. Evaluation of Simulation Based Education Clinical Preparation Program for Unstable Patient Management
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Dilek Kitapcioglu, Serpil Yaylaci, Sinem Yildiz Inanici, Mehmet Emin Aksoy, and Mehmet Ali Gulpinar
- Subjects
simulation based education ,unstable patient management ,and clinical transition program ,Information technology ,T58.5-58.64 ,Communication. Mass media ,P87-96 - Abstract
In this study, the aim is to evaluate clinical transfer of unstable patient management competencies acquired by learners in simulated environment and evolution of their skills in clinical environment. Performances of 87 intern medical students of Acıbadem Mehmet Ali Aydinlar University that participated in two weeks long simulation based education program were evaluated both in simulated environment and in real clinical environment. Analyzes were performed using the MedCalc Statistical Software version 12.7.7. Observational performance scores of Group A were 18,68±1,70 over 24 point in simulated environment and 19,65±2,87 in first clinical test and 22,12±2,45 in second clinical test. Scores of Group C were 18,9±4,55 in simulated environment 16,36±4,2 in first clinical test, and 23,32±2,44 in second clinical test. Scores of Group D were 14,5±4,04 in simulated environment 19,32±3,76 in first clinical test and 21,87±2,78 in second clinical test. Scores of Group B in simulated environment were 17,68±2,73 but Group B performances could not be evaluated in clinical environment due to pandemic. Simulation-based education is effective for improving the competencies of learners for management of unstable patients.
- Published
- 2021
36. Adiponectin: A Predictor for Breast Cancer Survival?
- Author
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Hikmet Erhan Güven, Lütfi Doğan, Mehmet Ali Gülçelik, and Neşe Ersöz Gülçelik
- Subjects
adiponectin ,breast cancer ,survival ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Medicine - Abstract
Objective:Breast cancers in women with low serum adiponectin levels have been reported to show phenotypes that are more aggressive. In 2008, we investigated the relationship between serum adiponectin levels and breast cancer in our case-controlled study involving 83 patients, in which serum adiponectin levels were measured preoperatively. In this study, we aimed to investigate the relationship between serum adiponectin levels and breast cancer-specific survival among these 83 patients.Materials and Methods:All 83 patients with stage I-III breast cancer, whose adiponectin levels were measured preoperatively in 2008 were enrolled in this study. The patients had no history of medications influencing insulin resistance prior to collecting the blood samples. Serum adiponectin concentrations were measured after overnight fasting (≥12 hours) by drawing a venous blood sample of 30 mL from the arm. ELISA (B-Bridge Human Adiponectin ELISA kit) was used for testing.Results:The mean adiponectin level was found to be 15,300 ng/mL. When the adiponectin levels of the patients were analyzed according to the stage of the disease, adiponectin levels tended to be significantly lower as the stage increased. The stage of the disease was an important determinant for both Diseas Free Survival (DFS) (p=0.003) and Overall Survival (OS) (p=0.005). A significant relationship between adiponectin levels and OS was also observed (p=0.025), and levels of adiponectin above the mean value of 15,300 ng/mL were associated with improved DFS (p=0.001).Conclusion:Preoperative adiponectin levels may be useful to predict survival rates in breast cancer or may be used as a marker/predictor for defining patients who require more aggressive treatment. In order for adiponectin to be used as a practical clinical marker for breast cancer, large database studies are should be conducted.
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- 2019
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37. Biological Subtypes of Breast Cancer and Sentinel Lymph Node Biopsy
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Muhammet Kadri Çolakoğlu, Erhan Güven, Gökhan Giray Akgül, Lütfi Doğan, and Mehmet Ali Gülçelik
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breast cancer ,methylene blue ,radiocolloid ,sentinel lymph node biopsy ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Medicine - Abstract
Objective:Breast cancer subtypes are used as prognostic and predictive factors considering the genomic profile of the disease. This study is designed to investigate the Sentinel Lymph Node (SLN) detection rate in breast cancer for different biological characteristics.Material and Methods:Patients on whom we performed the methylene blue method alone were named as Group I, radiocolloid substance method alone as Group II and both methylene blue and radiocolloid method as Group III. The results of biological tumor characteristics and characteristics of the patients on different SLN biopsy techniques were investigated.Results:The overall SLN detecting success rate was 83.3%. When considered for each group, success rate was 80% for group I, 84.9% for group II and 90.6% for group III. While a success rate of 94.6% was achieved with radiocolloid only in the patients in Luminal A and B subgroup, 90% success rate was achieved in Her2 (+) and triple negative (TN) patients with combined method.Conclusion:While successful results could be achieved by using radiocolloid substances alone in patients with Luminal A and B subtypes, combined methods should be used in HER2 (+) and TN patients.
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- 2018
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38. Sentinel Lymph Node Metastasis in Invasive Lobular Carcinoma of the Breast
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Hikmet Erhan Güven, Mahmut Onur Kültüroğlu, Mehmet Ali Gülçelik, and Cihangir Özaslan
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invasive lobular carcinoma ,sentinel lymph node ,metastasis ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Medicine - Abstract
Objective:Invasive lobular carcinoma (ILC) of the breast makes up 5 to 15 percent of all invasive breast cancers. It has distinctive clinical and histopathological features when compared to invasive ductal carcinoma (IDC). This study intends to describe factors influencing sentinel lymph node (SLN) positivity in patients with “pure” ILC.Materials and Methods:Data of 105 patients, who were treated at a tertiary oncology center, with lobular carcinoma of the breast that were subjected to SLN biopsy was probed retrospectively. Patients were categorized as ≤60 and >60 years of age, positive or negative for estrogen receptor and progesterone, tumor grade I, II and III, Ki67≤15% and >30%, lymphovascular invasion presence and the presence of multicentricity and multifocality.Results:Mean age at the time of diagnosis was 52 (38-81). Mean tumor size was 2.7 cm (0.7-13cm). Univariate analyses revealed a significant relationship between tumor size (≤2 cm vs >2cm) and metastasis in the SLN. This relation kept its significance in multivariate analyses. (p=0.013).Conclusion:With so many different characteristics from IDC, ILC is mostly a uniform tumor. In this study, tumor size was the only independent clinical parameter that was found related to SLN metastases.
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- 2018
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39. Factors Influencing Non-sentinel Node Metastasis in Patients with Macrometastatic Sentinel Lymph Node Involvement and Validation of Three Commonly Used Nomograms
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Hikmet Erhan Güven, Lütfi Doğan, Mahmut Onur Kültüroğlu, Mehmet Ali Gülçelik, and Cihangir Özaslan
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breast cancer ,sentinel node ,non-sentinel node metastasis ,nomogram ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Medicine - Abstract
Objective: Omitting axillary lymph node dissection (ALND) in a subgroup of patients with sentinel lymph node (SLN) metastasis is becoming a widely accepted practice. Avoiding the well-known complications of ALND is the sole aim without compromising the curative intention of surgery.Materials and methods: The data were probed for breast cancer patients that were operated on between February 2014 and June 2016. SLN biopsies were performed in 507 patients and out of 157 patients who underwent ALND for a metastatic SLN, 151 were found eligible for the analyses as having macrometastatic (>2mm) SLN. MD Anderson, Memorial Sloan Kettering Cancer Center and Helsinki nomograms were also tested in our patient population.Results: Pathologic tumor size greater than 2 cm, the ratio of metastatic SLN to dissected SLN, metastatic tumor greater than 1 cm and tumors that extended outside the SLN’s capsule were found to be associated with non-sentinel node metastasis in both univariate and multivariate tests. MD Anderson nomogram performed well with an area under the curve (AUC) value of 0.72.Conclusion: Our results suggest that ALND should be considered in patients with macrometastatic SLN greater than 10 mm in size, have extracapsular extension, have metastatic SLNs at a rate of more than 50% and whose primary tumor is greater than 2 cm.
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- 2017
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40. The Main Topics at the Oncoplastic Breast Surgery Course and Expert Panel
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Mustafa Emiroğlu, Bekir Kuru, Mehmet Ali Gülçelik, M. Kemal Atahan, Atakan Y. Sezer, Cem Karaali, and Bahadır Güllüoğlu
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oncoplastic breast surgery ,quadrantectomy (surgery for breast cancer based on tumour location) ,breast surgery ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Medicine - Abstract
The Oncoplastic and Reconstructive Breast Surgery course was held in Izmir by the Izmir Breast Diseases Federation in collaboration with the Breast Diseases Federation of Turkey. The techniques of oncoplasty, the application details and experience in this subject were shared. In this text, the main topics and outcomes are briefly summarised. These evaluations can be considered highly valuable on both local and regional scales.
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- 2017
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41. Analytical Solution of the Frictional Contact Problem of a Semi-circular Punch Sliding Over a Homogeneous Orthotropic Half-plane
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Aysegul Kucuksucu and Mehmet Ali Guler
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contact mechanics ,friction ,orthotropic materials ,singular integral equation ,semi-circular punch ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
A n analytical solution to the frictional sliding contact problem for homogeneous orthotropic materials indented by a semi-circular punch is developed.The principal axes of orthotropy are assumed to be parallel and perpendicular to the contact. Coulomb friction assumption is used to model the friction between the punch and the orthotropic medium. The mixed boundary value problem is reduced into a Fredholm integral equation of the second kind by using Fourier transform technique. The singular integral equation is solved analytically using Jacobi Polynomials for the unknown surface contact stresses. Numerical results show the effect of the orthotropic material parameters, coefficient of friction on the contact stress distribution and load vs. contact length behavior
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- 2016
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42. Surgeons’ Approaches and Professional Perspectives on Breast Masses: A National Survey in Turkey
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Mustafa Emiroğlu, Abdullah İnal, İsmail Sert, Cem Karaali, Kemal Peker, Enver İlhan, Mehmet Ali Gülçelik, Varlık Erol, Didem Can, and Cengiz Aydın
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breast mass ,surgeons’ approach ,survey ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Medicine - Abstract
Objective:General surgeons’ approaches to breast masses in their daily practices and their perspectives for issues on breast diseases and breast surgery are investigated through a survey.Materials and Methods:Answers of 524 general surgeons for the survey “Approach to breast diseases and breast surgery” between November 2012 and February 2013 were assessed. Demographic features, approaches to the breast masses, and answers for the clinical scenerios of surgeons were questioned. Surgeons were asked about management of breast cancer and the future role of surgeons for oncoplastic breast surgery and breast diseases.Results:Participants were representing 14.6% of all general surgeons in Turkey. The survey revealed that breast diseases are the most common cause for admission in general surgery outpatient clinics. Needle biopsies were employed by 241 (60%) respondents. Three hundred and seventy-one (71%) participants indicated that breast cancer management could be accurately conducted by the general surgeons. Two hundred and seventy-three (52%) respondents think that oncoplastic breast surgery should be performed by a general surgeon and 241 (41%) respondents predict that the role of general surgeons for breast diseases and breast surgery will decrease in the future.Conclusion:Basic approaches towards breast masses need to be improved in our country despite the highest frequency of breast diseases in outpatient admissions. The views and opinions of surgeons on breast diseases and the course of breast surgery in different regions and different communities need to be defined and clarified.
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- 2015
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43. The Approach of General Surgeons to Oncoplastic and Reconstructive Breast Surgery in Turkey: A Survey of Practice Patterns
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Mustafa Emiroğlu, Cem Karaali, Cengiz Aydın, İsmail Sert, Varlık Erol, Abdullah İnal, Kemal Peker, Enver İlhan, Hilmi Güngör, Mehmet Ali Gülçelik, and Didem Can
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General surgeon ,oncoplastic breast surgery ,survey ,Medicine - Abstract
Background: Oncoplastic Breast Surgery (OBS), which is a combination of oncological procedures and plastic surgery techniques, has recently gained widespread use. Aims: To assess the experiences, practice patterns and preferred approaches to Oncoplastic and Reconstructive Breast Surgery (ORBS) undertaken by general surgeons specializing in breast surgery in Turkey. Study Design: Cross-sectional study. Methods: Between December 2013 and February 2014, an eleven-question survey was distributed among 208 general surgeons specializing in breast surgery. The questions focused on the attitudes of general surgeons toward performing oncoplastic breast surgery (OBS), the role of the general surgeon in OBS and their training for it as well as their approaches to evaluating cosmetic outcomes in Breast Conserving Surgery (BCS) and informing patients about ORBS preoperatively. Results: Responses from all 208 surgeons indicated that 79.8% evaluated the cosmetic outcomes of BCS, while 94.2% informed their patients preoperatively about ORBS. 52.5% performed BCS (31.3% themselves, 21.1% together with a plastic surgeon). 53.8% emphasized that general surgeons should carry out OBS themselves. 36.1% of respondents suggested that OBS training should be included within mainstream surgical training, whereas 27.4% believed this training should be conducted by specialised centres. Conclusion: Although OBS procedure rates are low in Turkey, it is encouraging to see general surgeons practicing ORBS themselves. The survey demonstrates that our general surgeons aspire to learn and utilize OBS techniques.
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- 2014
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44. In Situ Ductal Carcinoma Arising in Benign Phyllodes Tumor in 19-Year Old Patient: A Case Report
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Muhammet Kadri Çolakoğlu, Erdinç Yenidoğan, Gökhan Giray Akgül, Sultan Çiğdem Irkkan, Yılmaz Özdemir, Mehmet Ali Gülçelik, and Mithat Çamlıbel
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phyllodes tumor ,breast ,intraductal ,carcinoma ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Medicine - Abstract
Phyllodes tumors are fibroepithelial lesions and malign forms are rare neoplasms with lower than 1% of all primary breast tumors. Malign forms are usually behaves like sarcomas because they occur in the stroma of the breast. Also proliferation of epithelium occurs and even it is less often, the epithelial component of phyllodes tumors can transform into malignancy too. This epithelial malignancies are usually in the form of infiltrative carcinomas and non-invasive tumors arising in benign phyllodes tumors are much rarer but can be seen. Literature include very few cases about this situation and cases are usually old woman. We report a 19-year old patient who was diagnosed with ductal carcinoma in situ arising in benign phyllodes tumor of the breast.
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- 2014
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45. THE EFFECT OF SILICON AND PVC DRAINAGE SYSTEM ON WOUND COMPLICATIONS FOR MODIFIED RADICAL MASTECTOMY
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Soykan Dinç, Bekir Kuru, Mehmet Ali Gülçelik, Erdinç Yenidoğan, and Haluk Alagöl
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Medicine - Abstract
Complications of modified radical mastectomy operation are bleeding, infection, necrosis and seroma. Most common complication is seroma. Evidence of seroma causes infection and increases the risk of necrosis, also increases the time of flep adjusting to chest wall and length of hospitality. We started this randomised prospective study at January 1999. Candidates of modified radical mastectomy in our clinic has been divided into two groups (decided by the usage of silicon and PVC drainage systems) (Group 1: PVC, Group 2: Silicon). For homogenisation of each group; patients who has body-mass index higher then 30 %, systemic diseases like diabetes, Neoadjuvan chemotherapy, and patients who has chestwall anomalies were excluded from the study. Overall drainage volume, evidence of infection and necrosis, and removal time of drainage system was noted. Indications of removing the drainage system for both group were; daily drainage volume under 50 ml, evidence of infection and daily drainage over 50 ml for 9 days. Mean drainage volumes of Group 1 and Group 2 were 985.4 ml and 639.1 ml, respectively. Infection was observed in 13 patients in Group 1, and 4 patients in Group 2. Evidence of necrosis was observed in 3 patients in Group 1, and none in Group 2. Group 1 and Group 2 median removal time of drainage was 6.25 and 5.18 days, respectively. Statistical significant differences was present. After examining these results, we decided the usage of closed silicon drainage systems after modified radical mastectomy operation decreases the complications of operation.
- Published
- 2006
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