43 results on '"Meghan T. Miller"'
Search Results
2. AntimiR targeting of microRNA-134 reduces seizures in a mouse model of Angelman syndrome
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Aoife Campbell, Gareth Morris, Albert Sanfeliu, Joana Augusto, Elena Langa, Jaideep C. Kesavan, Ngoc T. Nguyen, Ronan M. Conroy, Jesper Worm, Lukasz Kielpinski, Mads Aaboe Jensen, Meghan T. Miller, Thomas Kremer, Cristina R. Reschke, and David C. Henshall
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MT: Oligonucleotides: Therapies and Applications ,microRNAs ,Angelman syndrome ,epilepsy ,seizures ,miR-134 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Angelman syndrome (AS) is a severe neurodevelopmental disorder featuring ataxia, cognitive impairment, and drug-resistant epilepsy. AS is caused by mutations or deletion of the maternal copy of the paternally imprinted UBE3A gene, with current precision therapy approaches focusing on re-expression of UBE3A. Certain phenotypes, however, are difficult to rescue beyond early development. Notably, a cluster of microRNA binding sites was reported in the untranslated Ube3a1 transcript, including for miR-134, suggesting that AS may be associated with microRNA dysregulation. Here, we report levels of miR-134 and key targets are normal in the hippocampus of mice carrying a maternal deletion of Ube3a (Ube3am−/p+). Nevertheless, intracerebroventricular injection of an antimiR oligonucleotide inhibitor of miR-134 (Ant-134) reduced audiogenic seizure severity over multiple trials in 21- and 42-day-old AS mice. Interestingly, Ant-134 also improved distance traveled and center crossings of AS mice in the open-field test. Finally, we show that silencing miR-134 can upregulate targets of miR-134 in neurons differentiated from Angelman patient-derived induced pluripotent stem cells. These findings indicate that silencing miR-134 and possibly other microRNAs could be useful to treat clinically relevant phenotypes with a later developmental window in AS.
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- 2022
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3. Antagomir-mediated suppression of microRNA-134 reduces kainic acid-induced seizures in immature mice
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Aoife Campbell, Gareth Morris, Janosch P. Heller, Elena Langa, Elizabeth Brindley, Jesper Worm, Mads Aaboe Jensen, Meghan T. Miller, David C. Henshall, and Cristina R. Reschke
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Medicine ,Science - Abstract
Abstract MicroRNAs are short non-coding RNAs that negatively regulate protein levels and perform important roles in establishing and maintaining neuronal network function. Previous studies in adult rodents have detected upregulation of microRNA-134 after prolonged seizures (status epilepticus) and demonstrated that silencing microRNA-134 using antisense oligonucleotides, termed antagomirs, has potent and long-lasting seizure-suppressive effects. Here we investigated whether targeting microRNA-134 can reduce or delay acute seizures in the immature brain. Status epilepticus was induced in 21 day-old (P21) male mice by systemic injection of 5 mg/kg kainic acid. This triggered prolonged electrographic seizures and select bilateral neuronal death within the CA3 subfield of the hippocampus. Expression of microRNA-134 and functional loading to Argonaute-2 was not significantly changed in the hippocampus after seizures in the model. Nevertheless, when levels of microRNA-134 were reduced by prior intracerebroventricular injection of an antagomir, kainic acid-induced seizures were delayed and less severe and mice displayed reduced neuronal death in the hippocampus. These studies demonstrate targeting microRNA-134 may have therapeutic applications for the treatment of seizures in children.
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- 2021
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4. Antisense oligonucleotide treatment rescues UBE3A expression and multiple phenotypes of an Angelman syndrome mouse model
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Claudia Milazzo, Edwin J. Mientjes, Ilse Wallaard, Søren Vestergaard Rasmussen, Kamille Dumong Erichsen, Tejaswini Kakunuri, A.S. Elise van der Sman, Thomas Kremer, Meghan T. Miller, Marius C. Hoener, and Ype Elgersma
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Development ,Neuroscience ,Medicine - Abstract
Angelman syndrome (AS) is a severe neurodevelopmental disorder for which only symptomatic treatment with limited benefits is available. AS is caused by mutations affecting the maternally inherited ubiquitin protein ligase E3A (UBE3A) gene. Previous studies showed that the silenced paternal Ube3a gene can be activated by targeting the antisense Ube3a-ATS transcript. We investigated antisense oligonucleotide–induced (ASO-induced) Ube3a-ATS degradation and its ability to induce UBE3A reinstatement and rescue of AS phenotypes in an established Ube3a mouse model. We found that a single intracerebroventricular injection of ASOs at postnatal day 1 (P1) or P21 in AS mice resulted in potent and specific UBE3A reinstatement in the brain, with levels up to 74% of WT levels in the cortex and a full rescue of sensitivity to audiogenic seizures. AS mice treated with ASO at P1 also showed rescue of established AS phenotypes, such as open field and forced swim test behaviors, and significant improvement on the reversed rotarod. Hippocampal plasticity of treated AS mice was comparable to WT but not significantly different from PBS-treated AS mice. No rescue was observed for the marble burying and nest building phenotypes. Our findings highlight the promise of ASO-mediated reactivation of UBE3A as a disease-modifying treatment for AS.
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- 2021
- Full Text
- View/download PDF
5. Loss of Tsc1 in cerebellar Purkinje cells induces transcriptional and translation changes in FMRP target transcripts
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Jasbir Singh Dalal, Kellen Diamond Winden, Catherine Lourdes Salussolia, Maria Sundberg, Achint Singh, Truc Thanh Pham, Pingzhu Zhou, William T Pu, Meghan T Miller, and Mustafa Sahin
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Tuberous Sclerosis ,mTOR ,FMRP ,translation ,ribosome ,autism ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Tuberous sclerosis complex (TSC) is a genetic disorder that is associated with multiple neurological manifestations. Previously, we demonstrated that Tsc1 loss in cerebellar Purkinje cells (PCs) can cause altered social behavior in mice. Here, we performed detailed transcriptional and translational analyses of Tsc1-deficient PCs to understand the molecular alterations in these cells. We found that target transcripts of the Fragile X Mental Retardation Protein (FMRP) are reduced in mutant PCs with evidence of increased degradation. Surprisingly, we observed unchanged ribosomal binding for many of these genes using translating ribosome affinity purification. Finally, we found that multiple FMRP targets, including SHANK2, were reduced, suggesting that compensatory increases in ribosomal binding efficiency may be unable to overcome reduced transcript levels. These data further implicate dysfunction of FMRP and its targets in TSC and suggest that treatments aimed at restoring the function of these pathways may be beneficial.
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- 2021
- Full Text
- View/download PDF
6. Agonist-mediated switching of ion selectivity in TPC2 differentially promotes lysosomal function
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Susanne Gerndt, Cheng-Chang Chen, Yu-Kai Chao, Yu Yuan, Sandra Burgstaller, Anna Scotto Rosato, Einar Krogsaeter, Nicole Urban, Katharina Jacob, Ong Nam Phuong Nguyen, Meghan T Miller, Marco Keller, Angelika M Vollmar, Thomas Gudermann, Susanna Zierler, Johann Schredelseker, Michael Schaefer, Martin Biel, Roland Malli, Christian Wahl-Schott, Franz Bracher, Sandip Patel, and Christian Grimm
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TPC2 ,two-pore channel 2 ,lysosome ,NAADP ,PI(3,5)P2 ,TPC ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Ion selectivity is a defining feature of a given ion channel and is considered immutable. Here we show that ion selectivity of the lysosomal ion channel TPC2, which is hotly debated (Calcraft et al., 2009; Guo et al., 2017; Jha et al., 2014; Ruas et al., 2015; Wang et al., 2012), depends on the activating ligand. A high-throughput screen identified two structurally distinct TPC2 agonists. One of these evoked robust Ca2+-signals and non-selective cation currents, the other weaker Ca2+-signals and Na+-selective currents. These properties were mirrored by the Ca2+-mobilizing messenger, NAADP and the phosphoinositide, PI(3,5)P2, respectively. Agonist action was differentially inhibited by mutation of a single TPC2 residue and coupled to opposing changes in lysosomal pH and exocytosis. Our findings resolve conflicting reports on the permeability and gating properties of TPC2 and they establish a new paradigm whereby a single ion channel mediates distinct, functionally-relevant ionic signatures on demand.
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- 2020
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7. Angelman syndrome patient neuron screen identifies a potent and selective clinical ASO targeting UBE3A-ATS with long lasting effect in cynomolgus monkey
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Ravi Jagasia, Charlotte Bon, Soren V. Rasmussen, Solveig Badillo, Disa Tehler, Danièle Buchy, Marco Berrera, Megana Prasad, Marco Terrigno, Nikhil J. Pandya, Veronica Costa, Congwei Wang, Lykke Pedersen, Meghan T. Miller, Kamille Dumong Erichsen, Lars Joenson, Joerg Hipp, Azad Bonni, Lutz Müller, Annamaria Brändli-Baiocco, Thomas Kremer, Erich Koller, and Marius C. Hoener
- Abstract
Angelman syndrome (AS) is a severe neurodevelopmental disorder caused by the loss of neuronal E3 ligase UBE3A with no available treatment. Restoring UBE3A levels via downregulation of the paternally cis-acting long non-coding antisense transcript (UBE3A-ATS) is a potential disease modifying. Developing molecules targeting human UBE3A-ATS is challenging because it is expressed only in neurons and lacks animal species sequence conservation. To overcome this, we performed a library screen of locked-nucleic acid (LNA)-modified antisense oligonucleotides (ASOs) on AS patient-derived neurons, identifying initial sequences. Further optimization led to the identification of the ASO, RO7248824, which selectively and potently reduces UBE3A-ATS, while concomitantly upregulating the UBE3A mRNA and protein. These properties held true in both human AS patient- and neurotypical-, as well as cynomolgus monkey-derived neurons. In vivo use of tool molecules in wild-type (WT) and AS Ube3am-/p+ mice, revealed a steep relationship between UBE3A-ATS knock-down and UBE3A mRNA/protein upregulation, whereby an almost 90% downregulation was needed to achieve a 50% upregulation, respectively. This relationship was confirmed in cynomolgus monkeys. Whereby, repeated lumbar intrathecal administrations of RO7248824 was well tolerated without adverse in-life effects or tissue pathology and produced a robust, long lasting (up to 3 months) paternal reactivation of UBE3A mRNA/protein across key monkey brain regions. Our results demonstrate that AS human pluripotent stem cell neurons serve as an excellent translational tool and furthermore LNA-modified ASOs exhibit excellent drug-like properties. Sustained efficacy translated to infrequent, intrathecal dosing and serves as the basis for the ongoing clinical development of RO7248824 for AS.Graphical AbstractGraphical abstract.From AS patient blood to a neuronal screen, identifies clinical ASO with excellent in vivo properties.(1) Patients were recruited. (2) Whereby blood was reprogrammed into hIPSC and subsequently differentiated into neurons. (3) ASOs were designed and screened on human neurons to downregulate the UBE3A-ATS likely via directed RNase H Cleavage of Nascent Transcripts. (4a) RO7248824 was identified that potently and selective reduces UBE3A-ATS, concomitantly with upregulating the UBE3A sense transcript and protein which was used for in vitro pk/pd. (4b) In parallel tool murine ASO were used demonstrate in vivo POC.(5) Pivotal nonhuman primate studies to monitor safety and predict the human dose. (6) RO7248824 is in AS clinical trial.One Sentence SummaryFrom angelman syndrome human neuron screen to cynomolgus monkey proof of concept identifies the clinical molecule RO7248824
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- 2022
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8. Angelman syndrome genotypes manifest varying degrees of clinical severity and developmental impairment
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Anjali Sadhwani, Marius Keute, Lynne M. Bird, Joerg F. Hipp, Michelle L. Krishnan, Wen-Hann Tan, Meghan T. Miller, Stormy J. Chamberlain, and Ronald L. Thibert
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0301 basic medicine ,congenital, hereditary, and neonatal diseases and abnormalities ,Genotype ,Intellectual and Developmental Disabilities (IDD) ,Ubiquitin-Protein Ligases ,Biology ,Medical and Health Sciences ,Bayley Scales of Infant Development ,Article ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Chromosome 15 ,Genomic Imprinting ,Rare Diseases ,0302 clinical medicine ,Neurodevelopmental disorder ,Clinical Research ,Angelman syndrome ,Behavioral and Social Science ,UBE3A ,medicine ,Genetics ,2.1 Biological and endogenous factors ,Missense mutation ,Humans ,Molecular Biology ,Pediatric ,Psychiatry ,Chromosomes, Human, Pair 15 ,Drug discovery ,Human Genome ,Psychology and Cognitive Sciences ,Neurosciences ,Biological Sciences ,Autism spectrum disorders ,medicine.disease ,Phenotype ,Brain Disorders ,Psychiatry and Mental health ,Mental Health ,030104 developmental biology ,Angelman Syndrome ,030217 neurology & neurosurgery ,Neuroscience - Abstract
Angelman Syndrome (AS) is a severe neurodevelopmental disorder due to impaired expression of UBE3A in neurons. There are several genetic mechanisms that impair UBE3A expression, but they differ in how neighboring genes on chromosome 15 at 15q11–q13 are affected. There is evidence that different genetic subtypes present with different clinical severity, but a systematic quantitative investigation is lacking. Here we analyze natural history data on a large sample of individuals with AS (n = 250, 848 assessments), including clinical scales that quantify development of motor, cognitive, and language skills (Bayley Scales of Infant Development, Third Edition; Preschool Language Scale, Fourth Edition), adaptive behavior (Vineland Adaptive Behavioral Scales, Second Edition), and AS-specific symptoms (AS Clinical Severity Scale). We found that clinical severity, as captured by these scales, differs between genetic subtypes: individuals with UBE3A pathogenic variants and imprinting defects (IPD) are less affected than individuals with uniparental paternal disomy (UPD); of those with UBE3A pathogenic variants, individuals with truncating mutations are more impaired than those with missense mutations. Individuals with a deletion that encompasses UBE3A and other genes are most impaired, but in contrast to previous work, we found little evidence for an influence of deletion length (class I vs. II) on severity of manifestations. The results of this systematic analysis highlight the relevance of genomic regions beyond UBE3A as contributing factors in the AS phenotype, and provide important information for the development of new therapies for AS. More generally, this work exemplifies how increasing genetic irregularities are reflected in clinical severity.
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- 2020
9. Antisense oligonucleotide treatment rescues UBE3A expression and multiple phenotypes of an Angelman syndrome mouse model
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Rasmussen Søren Vestergaard, A S Elise van der Sman, Marius C. Hoener, Ype Elgersma, Claudia Milazzo, Tejaswini Kakunuri, Ilse Wallaard, Edwin Mientjes, Kamille Dumong Erichsen, Thomas Kremer, Meghan T. Miller, Clinical Genetics, and Neurosciences
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medicine.medical_specialty ,congenital, hereditary, and neonatal diseases and abnormalities ,Ubiquitin-Protein Ligases ,Neurodevelopment ,Biology ,Development ,Mouse models ,Open field ,Marble burying ,Mice ,Neurodevelopmental disorder ,Internal medicine ,Angelman syndrome ,medicine ,UBE3A ,Animals ,Gene Silencing ,Gene ,Gene Expression Profiling ,General Medicine ,Oligonucleotides, Antisense ,medicine.disease ,Phenotype ,Disease Models, Animal ,Endocrinology ,Treatment Outcome ,Biological Variation, Population ,Angelman Syndrome ,Neurological disorders ,Behavioural despair test ,Targeted Gene Repair ,Research Article ,Neuroscience - Abstract
Angelman syndrome (AS) is a severe neurodevelopmental disorder for which only symptomatic treatment with limited benefits is available. AS is caused by mutations affecting the maternally inherited ubiquitin protein ligase E3A (UBE3A) gene. Previous studies showed that the silenced paternal Ube3a gene can be activated by targeting the antisense Ube3a-ATS transcript. We investigated antisense oligonucleotide-induced (ASO-induced) Ube3a-ATS degradation and its ability to induce UBE3A reinstatement and rescue of AS phenotypes in an established Ube3a mouse model. We found that a single intracerebroventricular injection of ASOs at postnatal day 1 (P1) or P21 in AS mice resulted in potent and specific UBE3A reinstatement in the brain, with levels up to 74% of WT levels in the cortex and a full rescue of sensitivity to audiogenic seizures. AS mice treated with ASO at P1 also showed rescue of established AS phenotypes, such as open field and forced swim test behaviors, and significant improvement on the reversed rotarod. Hippocampal plasticity of treated AS mice was comparable to WT but not significantly different from PBS-treated AS mice. No rescue was observed for the marble burying and nest building phenotypes. Our findings highlight the promise of ASO-mediated reactivation of UBE3A as a disease-modifying treatment for AS.
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- 2021
- Full Text
- View/download PDF
10. Electrophysiological Phenotype in Angelman Syndrome Differs Between Genotypes
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Joel Frohlich, Lynne M. Bird, Benjamin D. Philpot, Hannah Purtell, Omar Khwaja, Joerg F. Hipp, Wen-Hann Tan, Pilar Garcés, Shafali S. Jeste, Meghan T. Miller, Michael S. Sidorov, Maria-Clemencia Hernandez, Alexander Rotenberg, Michelle L. Krishnan, and Marius C. Hoener
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0301 basic medicine ,Adolescent ,Genotype ,GABRA5 ,Electroencephalography ,03 medical and health sciences ,Chromosome 15 ,0302 clinical medicine ,Neurodevelopmental disorder ,Angelman syndrome ,medicine ,UBE3A ,Humans ,Theta Rhythm ,Child ,Biological Psychiatry ,Cerebral Cortex ,Genetics ,biology ,medicine.diagnostic_test ,Infant ,medicine.disease ,Brain Waves ,Phenotype ,030104 developmental biology ,Delta Rhythm ,Child, Preschool ,biology.protein ,Angelman Syndrome ,Beta Rhythm ,030217 neurology & neurosurgery - Abstract
Background Angelman syndrome (AS) is a severe neurodevelopmental disorder caused by either disruptions of the gene UBE3A or deletion of chromosome 15 at 15q11-q13, which encompasses UBE3A and several other genes, including GABRB3, GABRA5, GABRG3, encoding gamma-aminobutyric acid type A receptor subunits ( β 3, α 5, γ 3). Individuals with deletions are generally more impaired than those with other genotypes, but the underlying pathophysiology remains largely unknown. Here, we used electroencephalography (EEG) to test the hypothesis that genes other than UBE3A located on 15q11-q13 cause differences in pathophysiology between AS genotypes. Methods We compared spectral power of clinical EEG recordings from children (1–18 years of age) with a deletion genotype (n = 37) or a nondeletion genotype (n = 21) and typically developing children without Angelman syndrome (n = 48). Results We found elevated theta power (peak frequency: 5.3 Hz) and diminished beta power (peak frequency: 23 Hz) in the deletion genotype compared with the nondeletion genotype as well as excess broadband EEG power (1–32 Hz) peaking in the delta frequency range (peak frequency: 2.8 Hz), shared by both genotypes but stronger for the deletion genotype at younger ages. Conclusions Our results provide strong evidence for the contribution of non-UBE3A neuronal pathophysiology in deletion AS and suggest that hemizygosity of the GABRB3-GABRA5-GABRG3 gene cluster causes abnormal theta and beta EEG oscillations that may underlie the more severe clinical phenotype. Our work improves the understanding of AS pathophysiology and has direct implications for the development of AS treatments and biomarkers.
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- 2019
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11. Towards a better diagnosis and treatment of Rett syndrome: a model synaptic disorder
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Keji Li, Abhishek Banerjee, Meghan T. Miller, Mriganka Sur, and Walter E. Kaufmann
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0301 basic medicine ,Methyl-CpG-Binding Protein 2 ,Rett syndrome ,Disease ,Update ,MECP2 ,03 medical and health sciences ,0302 clinical medicine ,Neurodevelopmental disorder ,Intellectual disability ,Rett Syndrome ,Humans ,Medicine ,Neuronal Plasticity ,business.industry ,medicine.disease ,Treatment Outcome ,030104 developmental biology ,Autism spectrum disorder ,Endophenotype ,Synapses ,Synaptic plasticity ,Neurology (clinical) ,business ,Neuroscience ,030217 neurology & neurosurgery - Abstract
With the recent 50th anniversary of the first publication on Rett syndrome, and the almost 20 years since the first report on the link between Rett syndrome and MECP2 mutations, it is important to reflect on the tremendous advances in our understanding and their implications for the diagnosis and treatment of this neurodevelopmental disorder. Rett syndrome features an interesting challenge for biologists and clinicians, as the disorder lies at the intersection of molecular mechanisms of epigenetic regulation and neurophysiological alterations in synapses and circuits that together contribute to severe pathophysiological endophenotypes. Genetic, clinical, and neurobiological evidences support the notion that Rett syndrome is primarily a synaptic disorder, and a disease model for both intellectual disability and autism spectrum disorder. This review examines major developments in both recent neurobiological and preclinical findings of Rett syndrome, and to what extent they are beginning to impact our understanding and management of the disorder. It also discusses potential applications of knowledge on synaptic plasticity abnormalities in Rett syndrome to its diagnosis and treatment.
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- 2019
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12. Author response: Loss of Tsc1 in cerebellar Purkinje cells induces transcriptional and translation changes in FMRP target transcripts
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Pingzhu Zhou, Jasbir S. Dalal, Maria Sundberg, Achint Singh, Catherine L. Salussolia, Meghan T. Miller, Kellen D. Winden, Mustafa Sahin, William T. Pu, and Truc Thanh Pham
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medicine.anatomical_structure ,medicine ,Translation (biology) ,TSC1 ,Biology ,Cell biology - Published
- 2021
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13. Clinical trial strategies for rare neurodevelopmental disorders: challenges and opportunities
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Michelle L, Krishnan, Elizabeth, Berry-Kravis, Jamie K, Capal, Randall, Carpenter, Paul, Gringras, Joerg F, Hipp, Meghan T, Miller, Ana, Mingorance, Benjamin D, Philpot, Mathew T, Pletcher, Alexander, Rotenberg, Jorrit, Tjeertes, Paul P, Wang, Tom, Willgoss, Marie-Claire, de Wit, and Shafali S, Jeste
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Clinical Trials as Topic ,Rare Diseases ,Neurodevelopmental Disorders ,Research Design ,Humans - Published
- 2021
14. Loss of Tsc1 in cerebellar Purkinje cells induces transcriptional and translation changes in FMRP target transcripts
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Jasbir S. Dalal, Catherine L. Salussolia, William T. Pu, Achint Singh, Kellen D. Winden, Meghan T. Miller, Maria Sundberg, Pingzhu Zhou, and Mustafa Sahin
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congenital, hereditary, and neonatal diseases and abnormalities ,Mutant ,Genetic disorder ,Translation (biology) ,Ribosomal RNA ,Biology ,medicine.disease ,Ribosome ,SHANK2 ,Cell biology ,medicine.anatomical_structure ,medicine ,TSC1 ,Gene - Abstract
Tuberous sclerosis complex (TSC) is a genetic disorder that is associated with multiple neurological manifestations. Previously, we demonstrated that Tsc1 loss in cerebellar Purkinje cells (PCs) can cause altered social behavior in mice. Here, we performed detailed transcriptional and translational analyses of Tsc1-deficient PCs to understand the molecular alterations in these cells. We found that target transcripts of the Fragile X Mental Retardation Protein (FMRP) are reduced in mutant PCs with evidence of increased degradation. Surprisingly, we observed unchanged ribosomal binding for many of these genes using Translating Ribosome Affinity Purification (TRAP). Finally, we found that the FMRP target, SHANK2, was reduced in PC synapses, suggesting that compensatory increases in ribosomal binding efficiency may be unable to overcome reduced transcript levels. These data further implicate dysfunction of FMRP and its targets in TSC and suggest that treatments aimed at restoring the function of these pathways may be beneficial.
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- 2021
- Full Text
- View/download PDF
15. Loss of Tsc1 in cerebellar Purkinje cells induces transcriptional and translation changes in FMRP target transcripts
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Maria Sundberg, Achint Singh, Kellen D. Winden, Jasbir S. Dalal, Truc Thanh Pham, Catherine L. Salussolia, Pingzhu Zhou, Meghan T. Miller, William T. Pu, and Mustafa Sahin
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0301 basic medicine ,congenital, hereditary, and neonatal diseases and abnormalities ,Mouse ,QH301-705.5 ,Science ,Mutant ,Gene Expression ,translation ,autism ,Nerve Tissue Proteins ,Biology ,Ribosome ,General Biochemistry, Genetics and Molecular Biology ,Tuberous Sclerosis Complex 1 Protein ,03 medical and health sciences ,Fragile X Mental Retardation Protein ,Mice ,Purkinje Cells ,0302 clinical medicine ,Tuberous Sclerosis ,medicine ,Animals ,Biology (General) ,Gene ,PI3K/AKT/mTOR pathway ,General Immunology and Microbiology ,General Neuroscience ,Genetic disorder ,Translation (biology) ,General Medicine ,medicine.disease ,SHANK2 ,Cell biology ,Disease Models, Animal ,030104 developmental biology ,medicine.anatomical_structure ,ribosome ,mTOR ,Medicine ,TSC1 ,FMRP ,Ribosomes ,030217 neurology & neurosurgery ,Research Article ,Neuroscience - Abstract
Tuberous sclerosis complex (TSC) is a genetic disorder that is associated with multiple neurological manifestations. Previously, we demonstrated that Tsc1 loss in cerebellar Purkinje cells (PCs) can cause altered social behavior in mice. Here, we performed detailed transcriptional and translational analyses of Tsc1-deficient PCs to understand the molecular alterations in these cells. We found that target transcripts of the Fragile X Mental Retardation Protein (FMRP) are reduced in mutant PCs with evidence of increased degradation. Surprisingly, we observed unchanged ribosomal binding for many of these genes using translating ribosome affinity purification. Finally, we found that multiple FMRP targets, including SHANK2, were reduced, suggesting that compensatory increases in ribosomal binding efficiency may be unable to overcome reduced transcript levels. These data further implicate dysfunction of FMRP and its targets in TSC and suggest that treatments aimed at restoring the function of these pathways may be beneficial.
- Published
- 2021
16. Antisense oligonucleotide treatment rescues UBE3A expression and multiple phenotypes of an Angelman syndrome mouse model
- Author
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C. (Claudia) Milazzo, E.J. (Edwin) Mientjes, I. (Ilse) Wallaard, Søren Vestergaard Rasmussen, Kamille Dumong Erichsen, T (Teja) Kakunuri, A. S.Elise van der Sman, Thomas Kremer, Meghan T. Miller, Marius C. Hoener, Y. (Ype) Elgersma, C. (Claudia) Milazzo, E.J. (Edwin) Mientjes, I. (Ilse) Wallaard, Søren Vestergaard Rasmussen, Kamille Dumong Erichsen, T (Teja) Kakunuri, A. S.Elise van der Sman, Thomas Kremer, Meghan T. Miller, Marius C. Hoener, and Y. (Ype) Elgersma
- Abstract
Angelman syndrome (AS) is a severe neurodevelopmental disorder for which only symptomatic treatment with limited benefits is available. AS is caused by mutations affecting the maternally inherited ubiquitin protein ligase E3A (UBE3A) gene. Previous studies showed that the silenced paternal Ube3a gene can be activated by targeting the antisense Ube3a-ATS transcript. We investigated antisense oligonucleotide-induced (ASO-induced) Ube3a-ATS degradation and its ability to induce UBE3A reinstatement and rescue of AS phenotypes in an established Ube3a mouse model. We found that a single intracerebroventricular injection of ASOs at postnatal day 1 (P1) or P21 in AS mice resulted in potent and specific UBE3A reinstatement in the brain, with levels up to 74% of WT levels in the cortex and a full rescue of sensitivity to audiogenic seizures. AS mice treated with ASO at P1 also showed rescue of established AS phenotypes, such as open field and forced swim test behaviors, and significant improvement on the reversed rotarod. Hippocampal plasticity of treated AS mice was comparable to WT but not significantly different from PBS-treated AS mice. No rescue was observed for the marble burying and nest building phenotypes. Our findings highlight the promise of ASO-mediated reactivation of UBE3A as a disease-modifying treatment for AS.
- Published
- 2021
- Full Text
- View/download PDF
17. Measuring What Matters to Individuals with Angelman Syndrome and Their Families: Development of a Patient-Centered Disease Concept Model
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Siobhan Connor, Daiana Cassater, T.G. Willgoss, Terry Jo Bichell, Carla Dias-Barbosa, Lynne M. Bird, Julie McCormack, Rebecca D. Burdine, Meghan T. Miller, Michelle L. Krishnan, Dawn Phillips, and Sharon Claridge
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Patient-centered ,media_common.quotation_subject ,Clinical Sciences ,Developmental & Child Psychology ,Paediatrics and Reproductive Medicine ,03 medical and health sciences ,0302 clinical medicine ,Neurodevelopmental disorder ,Angelman syndrome ,Perception ,Patient-Centered Care ,Qualitative research ,Developmental and Educational Psychology ,Clinical endpoint ,medicine ,Psychology ,Humans ,Relevance (information retrieval) ,media_common ,0303 health sciences ,Sleep disorder ,030305 genetics & heredity ,Secondary research ,Models, Theoretical ,medicine.disease ,Psychiatry and Mental health ,Outcome assessment ,Caregivers ,Pediatrics, Perinatology and Child Health ,Original Article ,030217 neurology & neurosurgery ,Clinical psychology - Abstract
Angelman syndrome (AS) is a complex, heterogeneous, and life-long neurodevelopmental disorder. Despite the considerable impact on individuals and caregivers, no disease-modifying treatments are available. To support holistic clinical management and the development of AS-specific outcome measures for clinical studies, we conducted primary and secondary research identifying the impact of symptoms on individuals with AS and their unmet need. This qualitative research adopted a rigorous step-wise approach, aggregating information from published literature, then evaluating it via disease concept elicitation interviews with clinical experts and caregivers. We found that the AS-defining concepts most relevant for treatment included: impaired expressive communication, seizures, maladaptive behavior, cognitive impairment, motor function difficulties, sleep disturbance, and limited self-care abilities. We highlight the relevance of age in experiencing these key AS concepts, and the difference between the perceptions of clinicians and caregivers towards the syndrome. Finally, we outline the impact of AS on individuals, caregivers, and families.
- Published
- 2020
18. Agonist-mediated switching of ion selectivity in TPC2 differentially promotes lysosomal function
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Meghan T. Miller, Sandip Patel, Sandra Burgstaller, Anna Scotto Rosato, Franz Bracher, Thomas Gudermann, Nicole Urban, Einar Krogsaeter, Marco Keller, Johann Schredelseker, Yu-Kai Chao, Katharina Jacob, Christian Grimm, Susanne Gerndt, Christian Wahl-Schott, Ong Nam Phuong Nguyen, Martin Biel, Yu Yuan, Susanna Zierler, Cheng-Chang Chen, Roland Malli, Michael Schaefer, and Angelika M. Vollmar
- Subjects
Mouse ,NAADP ,Gating ,Mice ,0302 clinical medicine ,Phosphatidylinositol Phosphates ,Fluphenazine ,Biology (General) ,0303 health sciences ,Chemistry ,General Neuroscience ,Ionomycin ,General Medicine ,Ligand (biochemistry) ,TPC2 ,Single Molecule Imaging ,medicine.anatomical_structure ,lysosome ,Medicine ,TPC ,Research Article ,Human ,Agonist ,Cell signaling ,QH301-705.5 ,medicine.drug_class ,Science ,two-pore channel 2 ,Benzylisoquinolines ,General Biochemistry, Genetics and Molecular Biology ,Exocytosis ,03 medical and health sciences ,Biochemistry and Chemical Biology ,Lysosome ,medicine ,Pi ,Animals ,Humans ,Ion channel ,030304 developmental biology ,General Immunology and Microbiology ,PI(3,5)P2 ,Macrophages ,Sodium ,Calcium Channel Agonists ,HEK293 Cells ,Gene Expression Regulation ,Raloxifene Hydrochloride ,Biophysics ,Calcium ,Calcium Channels ,030217 neurology & neurosurgery ,NADP ,HeLa Cells - Abstract
Ion selectivity is a defining feature of a given ion channel and is considered immutable. Here we show that ion selectivity of the lysosomal ion channel TPC2, which is hotly debated (Calcraft et al., 2009; Guo et al., 2017; Jha et al., 2014; Ruas et al., 2015; Wang et al., 2012), depends on the activating ligand. A high-throughput screen identified two structurally distinct TPC2 agonists. One of these evoked robust Ca2+-signals and non-selective cation currents, the other weaker Ca2+-signals and Na+-selective currents. These properties were mirrored by the Ca2+-mobilizing messenger, NAADP and the phosphoinositide, PI(3,5)P2, respectively. Agonist action was differentially inhibited by mutation of a single TPC2 residue and coupled to opposing changes in lysosomal pH and exocytosis. Our findings resolve conflicting reports on the permeability and gating properties of TPC2 and they establish a new paradigm whereby a single ion channel mediates distinct, functionally-relevant ionic signatures on demand.
- Published
- 2020
19. Author response: Agonist-mediated switching of ion selectivity in TPC2 differentially promotes lysosomal function
- Author
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Sandra Burgstaller, Marco Keller, Martin Biel, Sandip Patel, Einar Krogsaeter, Franz Bracher, Michael Schaefer, Susanne Gerndt, Johann Schredelseker, Meghan T. Miller, Roland Malli, Yu-Kai Chao, Katharina Jacob, Christian Grimm, Susanna Zierler, Anna Scotto Rosato, Nicole Urban, Cheng-Chang Chen, Angelika M. Vollmar, Thomas Gudermann, Christian Wahl-Schott, Ong Nam Phuong Nguyen, and Yu Yuan
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Agonist ,Ion selectivity ,medicine.drug_class ,Chemistry ,medicine ,Biophysics ,Function (biology) - Published
- 2020
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20. Clinical trial strategies for rare neurodevelopmental disorders: challenges and opportunities
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Shafali S. Jeste, Jorrit Tjeertes, Marie-Claire de Wit, Michelle L. Krishnan, Joerg F. Hipp, Benjamin D. Philpot, Jamie K. Capal, Mathew T. Pletcher, Elizabeth Berry-Kravis, Randall L. Carpenter, Ana Mingorance, Paul P. Wang, Alexander Rotenberg, Paul Gringras, T.G. Willgoss, and Meghan T. Miller
- Subjects
0301 basic medicine ,Pharmacology ,medicine.medical_specialty ,business.industry ,General Medicine ,Clinical trial ,03 medical and health sciences ,fluids and secretions ,030104 developmental biology ,0302 clinical medicine ,030220 oncology & carcinogenesis ,mental disorders ,Drug Discovery ,Medicine ,business ,Intensive care medicine ,Clinical evaluation ,reproductive and urinary physiology - Abstract
Novel clinical evaluation strategies are needed to fulfil the potential of targeted therapies for rare neurodevelopmental disorders. Novel clinical evaluation strategies are needed to fulfil the potential of targeted therapies for rare neurodevelopmental disorders.
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- 2021
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21. Proteomic analyses reveal misregulation of LIN28 expression and delayed timing of glial differentiation in human iPS cells with MECP2 loss-of-function
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Meghan T. Miller, Cassiano Carromeu, Mathieu Lavallée-Adam, Beatriz C.G. Freitas, Xindao Hu, John R. Yates, Jeffrey N. Savas, Anirvan Ghosh, Alysson R. Muotri, Jean J. Kim, and Asakura, Atsushi
- Subjects
0301 basic medicine ,Male ,Proteomics ,Macroglial Cells ,Methyl-CpG-Binding Protein 2 ,Physiology ,Cellular differentiation ,Neurodegenerative ,LIN28 ,Regenerative Medicine ,Biochemistry ,Nervous System ,Congenital ,Database and Informatics Methods ,0302 clinical medicine ,Neural Stem Cells ,Loss of Function Mutation ,Animal Cells ,Medicine and Health Sciences ,2.1 Biological and endogenous factors ,Developmental ,Aetiology ,Induced pluripotent stem cell ,Regulation of gene expression ,Pediatric ,Neurons ,Multidisciplinary ,Spectrometric Identification of Proteins ,Stem Cell Research - Induced Pluripotent Stem Cell - Human ,Proteomic Databases ,Stem Cells ,Stable Isotope Labeling by Amino Acids in Cell Culture ,Gene Expression Regulation, Developmental ,RNA-Binding Proteins ,Cell Differentiation ,Neural stem cell ,Cell biology ,Electrophysiology ,Neurological ,Medicine ,Female ,Cellular Types ,Anatomy ,Neuroglia ,Neuronal Differentiation ,Research Article ,congenital, hereditary, and neonatal diseases and abnormalities ,General Science & Technology ,Intellectual and Developmental Disabilities (IDD) ,Science ,Induced Pluripotent Stem Cells ,Neurophysiology ,Glial Cells ,Biology ,Research and Analysis Methods ,MECP2 ,Cell Line ,03 medical and health sciences ,Astrocyte differentiation ,Rare Diseases ,Rett Syndrome ,Genetics ,Humans ,Progenitor cell ,Stem Cell Research - Embryonic - Human ,Stem Cell Research - Induced Pluripotent Stem Cell ,Neurosciences ,Biology and Life Sciences ,Cell Biology ,Stem Cell Research ,Brain Disorders ,030104 developmental biology ,Biological Databases ,Gene Expression Regulation ,Cellular Neuroscience ,Astrocytes ,Synapses ,030217 neurology & neurosurgery ,Developmental Biology ,Neuroscience - Abstract
Rett syndrome (RTT) is a pervasive developmental disorder caused by mutations in MECP2. Complete loss of MECP2 function in males causes congenital encephalopathy, neurodevelopmental arrest, and early lethality. Induced pluripotent stem cell (iPSC) lines from male patients harboring mutations in MECP2, along with control lines from their unaffected fathers, give us an opportunity to identify some of the earliest cellular and molecular changes associated with MECP2 loss-of-function (LOF). We differentiated iPSC-derived neural progenitor cells (NPCs) using retinoic acid (RA) and found that astrocyte differentiation is perturbed in iPSC lines derived from two different patients. Using highly stringent quantitative proteomic analyses, we found that LIN28, a gene important for cell fate regulation and developmental timing, is upregulated in mutant NPCs compared to WT controls. Overexpression of LIN28 protein in control NPCs suppressed astrocyte differentiation and reduced neuronal synapse density, whereas downregulation of LIN28 expression in mutant NPCs partially rescued this synaptic deficiency. These results indicate that the pathophysiology of RTT may be caused in part by misregulation of developmental timing in neural progenitors, and the subsequent consequences of this disruption on neuronal and glial differentiation.
- Published
- 2019
22. Characterization of a human pluripotent stem cell-derived model of neuronal development using multiplexed targeted proteomics
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Arno Friedlein, Sebastian Lugert, Stefan Aigner, Paul Cutler, Martin Ebeling, Veronica Costa, Meghan T. Miller, Paolo Piraino, Christoph Patsch, Ravi Jagasia, and Tom Dunkley
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Neurons ,Pluripotent Stem Cells ,Proteomics ,Principal Component Analysis ,Time Factors ,Drug discovery ,Phenotypic screening ,Clinical Biochemistry ,Cell Differentiation ,Translation (biology) ,Computational biology ,Human brain ,Biology ,Bioinformatics ,Models, Biological ,Neural stem cell ,Cell Line ,medicine.anatomical_structure ,Precursor cell ,Neuron differentiation ,medicine ,Cluster Analysis ,Humans ,Induced pluripotent stem cell - Abstract
Purpose Human pluripotent stem cell (hPSC)-derived cellular models have great potential to enable drug discovery and improve translation of preclinical insights to the clinic. We have developed a hPSC-derived neural precursor cell model for studying early events in human brain development. We present protein-level characterization of this model, using a multiplexed SRM approach, to establish reproducibility and physiological relevance; essential prerequisites for utilization of the neuronal development model in phenotypic screening-based drug discovery. Experimental design Profiles of 246 proteins across three key stages of in vitro neuron differentiation were analyzed by SRM. Three independently hPSC-derived isogenic neural stem cell (NSC) lines were analyzed across five to nine independent neuronal differentiations. Results One hundred seventy-five proteins were reliably quantified revealing a time-dependent pattern of protein regulation that reflected protein dynamics during in vivo brain development and that was conserved across replicate differentiations and multiple cell lines. Conclusions and clinical relevance SRM-based protein profiling enabled establishment of the reproducibility and physiological relevance of the hPSC-derived neuronal model. Combined with the successful quantification of proteins relevant to neurodevelopmental diseases, this validates the platform for use as a model to enable neuroscience drug discovery.
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- 2015
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23. The Macromolecular Architecture of Extracellular Domain of αNRXN1: Domain Organization, Flexibility, and Insights into Trans-Synaptic Disposition
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Terunaga Nakagawa, Meghan T. Miller, Jill Trewhella, Jennifer Wilson, Palmer Taylor, Borries Demeler, Cy M. Jeffries, and Davide Comoletti
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Models, Molecular ,Flexibility (anatomy) ,Synaptic cleft ,Protein Conformation ,Cell Adhesion Molecules, Neuronal ,Nerve Tissue Proteins ,Biology ,Article ,MOLNEURO ,Domain (software engineering) ,03 medical and health sciences ,0302 clinical medicine ,Protein structure ,X-Ray Diffraction ,Structural Biology ,Extracellular ,medicine ,Humans ,Neural Cell Adhesion Molecules ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,integumentary system ,Macromolecular architecture ,Calcium-Binding Proteins ,Protein Structure, Tertiary ,Crystallography ,Microscopy, Electron ,medicine.anatomical_structure ,RNA splicing ,Synapses ,Biophysics ,Ultracentrifuge ,Ultracentrifugation ,030217 neurology & neurosurgery - Abstract
Neurexins are multidomain synaptic cell-adhesion proteins that associate with multiple partnering proteins. Genetic evidence indicates that neurexins may contribute to autism, schizophrenia, and nicotine dependence. Using analytical ultracentrifugation, single-particle electron microscopy, and solution X-ray scattering, we obtained a three-dimensional structural model of the entire extracellular domain of neurexin-1alpha. This protein adopts a dimensionally asymmetric conformation that is monomeric in solution, with a maximum dimension of approximately 170 A. The extracellular domain of alpha-neurexin maintains a characteristic "Y" shape, whereby LNS domains 1-4 form an extended base of the "Y" and LNS5-6 the shorter arms. Moreover, two major regions of flexibility are present: one between EGF1 and LNS2, corresponding to splice site 1, another between LNS5 and 6. We thus provide the first structural insights into the architecture of the extracellular region of neurexin-1alpha, show how the protein may fit in the synaptic cleft, and how partnering proteins could bind simultaneously.
- Published
- 2010
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24. Computer-Aided Detection of Polyps on Oral Contrast–Enhanced CT Colonography
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Meghan T. Miller, J. Richard Choi, Perry J. Pickhardt, William R. Schindler, Marek Franaszek, and Ronald M. Summers
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Male ,medicine.medical_specialty ,Contrast enhancement ,Enhanced ct ,media_common.quotation_subject ,Administration, Oral ,Colonic Polyps ,Contrast Media ,medicine ,Humans ,Contrast (vision) ,Radiology, Nuclear Medicine and imaging ,Aged ,Diatrizoate Meglumine ,media_common ,business.industry ,Subtraction ,General Medicine ,Middle Aged ,Cad system ,digestive system diseases ,Computer aided detection ,Bowel preparation ,Radiographic Image Interpretation, Computer-Assisted ,Female ,Radiology ,business ,Nuclear medicine ,Colonography, Computed Tomographic - Abstract
Summers RM, Franaszek M, Miller MT, Pickhardt PJ, Choi JR, Schindler WR recently published large clinical trial suggests that CT colonography may play an important role for total colonic screening [1]. The high sensitivity and specificity of polyp detection reported from the trial in part may have resulted from the use of oral contrast enhancement [2]. With the administration of small amounts of oral contrast agents, residual fluid and feces become identifiable [3]. Bowel opacification, however, introduces a new challenge for computer-aided detection (CAD) of polyps on CT colonography because most CAD is designed to find polyps only in the air-filled colon. The purpose of this report is to discuss a CAD system that detects polyps in the opacified colon. The system consists of a bowel preparation, a colon segmentation algorithm, a fluid subtraction algorithm, and a CAD scheme.
- Published
- 2005
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25. Colonic Polyp Segmentation in CT Colonography-Based on Fuzzy Clustering and Deformable Models
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Ronald M. Summers, Marek Franaszek, Jianhua Yao, and Meghan T. Miller
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Fuzzy clustering ,Fuzzy set ,Colonic Polyps ,CAD ,Models, Biological ,Sensitivity and Specificity ,Pattern Recognition, Automated ,Imaging, Three-Dimensional ,Fuzzy Logic ,Artificial Intelligence ,Cluster Analysis ,Humans ,Medicine ,Computer vision ,Segmentation ,Electrical and Electronic Engineering ,Cluster analysis ,Radiological and Ultrasound Technology ,business.industry ,Reproducibility of Results ,Signal Processing, Computer-Assisted ,Colonic Polyp ,Repeatability ,Image segmentation ,Elasticity ,digestive system diseases ,Computer Science Applications ,Radiographic Image Enhancement ,Radiographic Image Interpretation, Computer-Assisted ,Artificial intelligence ,business ,Colonography, Computed Tomographic ,Algorithms ,Software - Abstract
An automatic method to segment colonic polyps in computed tomography (CT) colonography is presented in this paper. The method is based on a combination of knowledge-guided intensity adjustment, fuzzy c-mean clustering, and deformable models. The computer segmentations were compared with manual segmentations to validate the accuracy of our method. An average 76.3% volume overlap percentage among 105 polyp detections was reported in the validation, which was very good considering the small polyp size. Several experiments were performed to investigate the intraoperator and interoperator repeatability of manual colonic polyp segmentation. The investigation demonstrated that the computer-human repeatability was as good as the interoperator repeatability. The polyp segmentation was also applied in computer-aided detection (CAD) to reduce the number of false positive (FP) detections and provide volumetric features for polyp classification. Our segmentation method was able to eliminate 30% of FP detections. The volumetric features computed from the segmentation can further reduce FP detections by 50% at 80% sensitivity.
- Published
- 2004
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26. Pancreatic Insulinomas in Multiple Endocrine Neoplasia, Type I Knockout Mice Can Develop in the Absence of Chromosome Instability or Microsatellite Instability
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Alyssa L. Kennedy, Peter C. Scacheri, J. Graeme Hodgson, Stephen J. Marx, Meghan T. Miller, Joe W. Gray, Allen M. Spiegel, Koei Chin, and Francis S. Collins
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Male ,endocrine system ,Cancer Research ,endocrine system diseases ,Gene Dosage ,Loss of Heterozygosity ,Biology ,medicine.disease_cause ,Polymerase Chain Reaction ,Loss of heterozygosity ,Mice ,Chromosomal Instability ,Proto-Oncogene Proteins ,Chromosome instability ,Multiple Endocrine Neoplasia Type 1 ,medicine ,Animals ,MEN1 ,Allele ,Multiple endocrine neoplasia ,Alleles ,In Situ Hybridization ,Mice, Knockout ,Genetics ,Microsatellite instability ,medicine.disease ,Pancreatic Neoplasms ,Oncology ,Female ,Insulinoma ,Carcinogenesis ,Microsatellite Repeats ,Comparative genomic hybridization - Abstract
Multiple endocrine neoplasia, type I (MEN1) is an inherited cancer syndrome characterized by tumors arising primarily in endocrine tissues. The responsible gene acts as a tumor suppressor, and tumors in affected heterozygous individuals occur after inactivation of the wild-type allele. Previous studies have shown that Men1 knockout mice develop multiple pancreatic insulinomas, but this occurs many months after loss of both copies of the Men1 gene. These studies imply that loss of Men1 is not alone sufficient for tumor formation and that additional somatic genetic changes are most likely essential for tumorigenesis. The usual expectation is that such mutations would arise either by a chromosomal instability or microsatellite instability mechanism. In a study of more then a dozen such tumors, using the techniques of array-based comparative genomic hybridization, fluorescent in situ hybridization, loss of heterozygosity analysis using multiple microsatellite markers across the genome, and real time PCR to assess DNA copy number, it appears that many of these full-blown clonal adenomas remain remarkably euploid. Furthermore, the loss of the wild-type Men1 allele in heterozygous Men1 mice occurs by loss and reduplication of the entire mutant-bearing chromosome. Thus, the somatic genetic changes that are postulated to lead to tumorigenesis in a mouse model of MEN1 must be unusually subtle, occurring at either the nucleotide level or through epigenetic mechanisms.
- Published
- 2004
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27. NEAMS Update. Quarterly Report for April - June 2012
- Author
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Meghan T. Miller, Ronald M. Summers, D. Pointer, John H. Stewart, D. Bernholdt, X. Sun, K.S. Bradley, S. Hayes, and P. Sadasivan
- Published
- 2012
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28. NEAMS update quarterly report for January - March 2012
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Meghan T. Miller, Ronald M. Summers, D. Bernholdt, X. Sun, John H. Stewart, K.S. Bradley, D. Pointer, S. Hayes, and P. Sadasivan
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Engineering ,business.industry ,Forensic engineering ,Sampling (statistics) ,business ,Quality assurance ,Civil engineering - Published
- 2012
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29. Transcellular neuroligin-2 interactions enhance insulin secretion and are integral to pancreatic β cell function
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Ian R. Sweet, Steven D. Chessler, Arthur T. Suckow, Meghan T. Miller, Davide Comoletti, Sonya Egodage, Charles Zhang, and Palmer Taylor
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Cell signaling ,medicine.medical_treatment ,Cell Adhesion Molecules, Neuronal ,Neurexin ,Neuroligin ,Nerve Tissue Proteins ,Cell Communication ,Biology ,Biochemistry ,Rats, Sprague-Dawley ,Insulin receptor substrate ,Insulin-Secreting Cells ,Insulin Secretion ,medicine ,Animals ,Humans ,Insulin ,Transcellular ,Molecular Biology ,Cell Proliferation ,HEK 293 cells ,Cell Biology ,Cell biology ,Rats ,HEK293 Cells ,Metabolism ,Gene Expression Regulation ,Beta cell - Abstract
Normal glucose-stimulated insulin secretion is dependent on interactions between neighboring β cells. Elucidation of the reasons why this cell-to-cell contact is essential will probably yield critical insights into β cell maturation and function. In the central nervous system, transcellular protein interactions (i.e. interactions between proteins on the surfaces of different cells) involving neuroligins are key mediators of synaptic functional development. We previously demonstrated that β cells express neuroligin-2 and that insulin secretion is affected by changes in neuroligin-2 expression. Here we show that the effect of neuroligin-2 on insulin secretion is mediated by transcellular interactions. Neuroligin-2 binds with nanomolar affinity to a partner on the β cell surface and contributes to the increased insulin secretion brought about by β cell-to-β cell contact. It does so in a manner seemingly independent of interactions with neurexin, a known binding partner. As in the synapse, transcellular neuroligin-2 interactions enhance the functioning of the submembrane exocytic machinery. Also, as in the synapse, neuroligin-2 clustering is important. Neuroligin-2 in soluble form, rather than presented on a cell surface, decreases insulin secretion by rat islets and MIN-6 cells, most likely by interfering with endogenous neuroligin interactions. Prolonged contact with neuroligin-2-expressing cells increases INS-1 β cell proliferation and insulin content. These results extend the known parallels between the synaptic and β cell secretory machineries to extracellular interactions. Neuroligin-2 interactions are one of the few transcellular protein interactions thus far identified that directly enhance insulin secretion. Together, these results indicate a significant role for transcellular neuroligin-2 interactions in the establishment of β cell function.
- Published
- 2012
30. Neuroligin Trafficking Deficiencies Arising from Mutations in the α/β-Hydrolase Fold Protein Family*
- Author
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Shelley Camp, Davide Comoletti, Roger Y. Tsien, Noga Dubi, Antonella De Jaco, Michael Z. Lin, Margaret T. Butko, Palmer Taylor, Mark H. Ellisman, and Meghan T. Miller
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Protein Folding ,Protein family ,Hydrolases ,Cell Adhesion Molecules, Neuronal ,Protein domain ,Mutant ,Amino Acid Motifs ,Mutation, Missense ,Neuroligin ,Nerve Tissue Proteins ,Biochemistry ,Hippocampus ,Cell Line ,Protein structure ,Congenital Hypothyroidism ,Missense mutation ,Animals ,Humans ,Autistic Disorder ,Molecular Biology ,Genetics ,biology ,Membrane Proteins ,Cell Biology ,Dendrites ,Transport protein ,Protein Structure, Tertiary ,Rats ,Protein Transport ,Amino Acid Substitution ,Chaperone (protein) ,Protein Structure and Folding ,biology.protein ,Protein Processing, Post-Translational - Abstract
Despite great functional diversity, characterization of the alpha/beta-hydrolase fold proteins that encompass a superfamily of hydrolases, heterophilic adhesion proteins, and chaperone domains reveals a common structural motif. By incorporating the R451C mutation found in neuroligin (NLGN) and associated with autism and the thyroglobulin G2320R (G221R in NLGN) mutation responsible for congenital hypothyroidism into NLGN3, we show that mutations in the alpha/beta-hydrolase fold domain influence folding and biosynthetic processing of neuroligin3 as determined by in vitro susceptibility to proteases, glycosylation processing, turnover, and processing rates. We also show altered interactions of the mutant proteins with chaperones in the endoplasmic reticulum and arrest of transport along the secretory pathway with diversion to the proteasome. Time-controlled expression of a fluorescently tagged neuroligin in hippocampal neurons shows that these mutations compromise neuronal trafficking of the protein, with the R451C mutation reducing and the G221R mutation virtually abolishing the export of NLGN3 from the soma to the dendritic spines. Although the R451C mutation causes a local folding defect, the G221R mutation appears responsible for more global misfolding of the protein, reflecting their sequence positions in the structure of the protein. Our results suggest that disease-related mutations in the alpha/beta-hydrolase fold domain share common trafficking deficiencies yet lead to discrete congenital disorders of differing severity in the endocrine and nervous systems.
- Published
- 2010
31. Structural properties of the extracellular domain of the synaptic adhesion protein α‐neurexin
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Palmer Taylor, Meghan T. Miller, Michal Harel, Mauro Mileni, and Teru Nakagawa
- Subjects
Chemistry ,Genetics ,Extracellular ,Biophysics ,Neurexin ,Alpha (ethology) ,Molecular Biology ,Biochemistry ,Adhesion protein ,Biotechnology ,Domain (software engineering) - Published
- 2010
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32. Structural characterization of the extracellular domain of alpha‐neurexin:insights into synapse assembly
- Author
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Teru Nakagawa, Meghan T. Miller, Palmer Taylor, Davide Comoletti, and Jennifer A. Wilson
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Synapse assembly ,Chemistry ,Genetics ,Extracellular ,Neurexin ,Biophysics ,Alpha (ethology) ,Molecular Biology ,Biochemistry ,Biotechnology ,Domain (software engineering) - Published
- 2009
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33. Insights into the structure and function of the extracellular domain of alpha‐neurexin by single particle EM and surface plasmon resonance
- Author
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Teru Nakagawa, Davide Comoletti, Palmer Taylor, Jennifer Wilson, and Meghan T. Miller
- Subjects
Physics ,Nuclear magnetic resonance ,Domain (ring theory) ,Genetics ,Neurexin ,Extracellular ,Alpha (ethology) ,Particle ,Surface plasmon resonance ,Molecular Biology ,Biochemistry ,Biotechnology ,Structure and function - Published
- 2008
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34. Trafficking of neuroligin mutant proteins associated with autism
- Author
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Meghan T. Miller, Noga Dubi, Antonella De Jaco, Davide Comoletti, and Palmer Taylor
- Subjects
Genetics ,Mutant ,medicine ,Autism ,Neuroligin ,Biology ,medicine.disease ,Molecular Biology ,Biochemistry ,Biotechnology - Published
- 2008
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35. Small angle x‐ray scattering and analytical ultracentrifugation characterization of the extracellular domain of α‐neurexin, alone and in complex with neuroligin‐1
- Author
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Palmer Taylor, Davide Comoletti, Jennifer A. Wilson, Jill Trewhella, and Meghan T. Miller
- Subjects
Materials science ,Small-angle X-ray scattering ,Neurexin ,Alpha (ethology) ,Neuroligin ,Biochemistry ,Characterization (materials science) ,Analytical Ultracentrifugation ,Domain (ring theory) ,Genetics ,Extracellular ,Biophysics ,Molecular Biology ,Biotechnology - Published
- 2008
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36. Structural Analysis of the Synaptic Protein Neuroligin and Its β-Neurexin Complex: Determinants for Folding and Cell Adhesion
- Author
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Palmer Taylor, Pascale Marchot, Meghan T. Miller, Yves Bourne, Igor P. Fabrichny, Philippe Leone, Davide Comoletti, Gerlind Sulzenbacher, Institut Jean Roche - Biologie des interactions cellulaires (IJRBIC), Université de la Méditerranée - Aix-Marseille 2-Université Paul Cézanne - Aix-Marseille 3-Assistance Publique - Hôpitaux de Marseille (APHM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Architecture et fonction des macromolécules biologiques (AFMB), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), University of California [Riverside] (UCR), University of California, University of California [Riverside] (UC Riverside), and University of California (UC)
- Subjects
0303 health sciences ,integumentary system ,[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM] ,Neuroscience(all) ,General Neuroscience ,fungi ,Neurexin ,Synaptogenesis ,Neuroligin ,Plasma protein binding ,Biology ,MOLNEURO ,03 medical and health sciences ,0302 clinical medicine ,Membrane protein ,Biochemistry ,Hydrolase ,Biophysics ,[CHIM.CRIS]Chemical Sciences/Cristallography ,Protein folding ,CELLBIO ,Cell adhesion ,030217 neurology & neurosurgery ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology - Abstract
The neuroligins are postsynaptic cell adhesion proteins whose associations with presynaptic neurexins participate in synaptogenesis. Mutations in the neuroligin and neurexin genes appear to be associated with autism and mental retardation. The crystal structure of a neuroligin reveals features not found in its catalytically active relatives, such as the fully hydrophobic interface forming the functional neuroligin dimer; the conformations of surface loops surrounding the vestigial active center; the location of determinants that are critical for folding and processing; and the absence of a macromolecular dipole and presence of an electronegative, hydrophilic surface for neurexin binding. The structure of a beta-neurexin-neuroligin complex reveals the precise orientation of the bound neurexin and, despite a limited resolution, provides substantial information on the Ca2+-dependent interactions network involved in trans-synaptic neurexin-neuroligin association. These structures exemplify how an alpha/beta-hydrolase fold varies in surface topography to confer adhesion properties and provide templates for analyzing abnormal processing or recognition events associated with autism.
- Published
- 2007
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37. Structural insights into competitive and non‐competitive nicotinic antagonists
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J. Michael McIntosh, Scott B. Hansen, Baldomero M. Olivera, Palmer Taylor, and Meghan T. Miller
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Chemistry ,Genetics ,Pharmacology ,Nicotinic Antagonist ,Non competitive ,Molecular Biology ,Biochemistry ,Biotechnology - Published
- 2006
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38. Feature selection for computer-aided polyp detection using genetic algorithms
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James D. Malley, Ronald M. Summers, Meghan T. Miller, and Anna K. Jerebko
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Virtual colonoscopy ,medicine.diagnostic_test ,Computer science ,business.industry ,Feature selection ,Pattern recognition ,Machine learning ,computer.software_genre ,Cross-validation ,Support vector machine ,Computer-aided diagnosis ,Genetic algorithm ,medicine ,Computer-aided ,Artificial intelligence ,business ,computer ,Classifier (UML) - Abstract
To improve computer aided diagnosis (CAD) for CT colonography we designed a hybrid classification scheme that uses a committee of support vector machines (SVMs) combined with a genetic algorithm (GA) for variable selection. The genetic algorithm selects subsets of four features, which are later combined to form a committee, with majority vote for classification across the base classifiers. Cross validation was used to predict the accuracy (sensitivity, specificity, and combined accuracy) of each base classifier SVM. As a comparison for GA, we analyzed a popular approach to feature selection called forward stepwise search (FSS). We conclude that genetic algorithms are effective in comparison to the forward search procedure when used in conjunction with a committee of support vector machine classifiers for the purpose of colonic polyp identification.
- Published
- 2003
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39. Automatic segmentation of colonic polyps in CT colonography based on knowledge-guided deformable models
- Author
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Meghan T. Miller, Marek Franaszek, Jianhua Yao, and Ronald M. Summers
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Ground truth ,Pixel ,Virtual colonoscopy ,medicine.diagnostic_test ,business.industry ,Scale-space segmentation ,Fuzzy logic ,digestive system diseases ,surgical procedures, operative ,otorhinolaryngologic diseases ,medicine ,Automatic segmentation ,Computer vision ,Segmentation ,Artificial intelligence ,business ,Cluster analysis ,neoplasms ,Mathematics - Abstract
An automatic method to segment colonic polyps from CT colonography is presented. The method is based on a combination of knowledge-guided intensity adjustment, fuzzy c-mean clustering, and deformable models. The input is a set of polyp seed points generated by filters on geometric properties of the colon surface. First, the potential polyp region is enhanced by a knowledge-guided adjustment. Then, a fuzzy c-mean clustering is applied on a 64*64 pixel sub-image around the seed. Fuzzy membership functions for lumen air, polyp tissues and other tissues are computed for each pixel. Finally, the gradient of the fuzzy membership function is used as the image force to drive a deformable model to the polyp boundary. The segmentation process is first executed on the 2D transverse slice where the polyp seed is located, and then is propagated to neighboring slices to construct a 3D representation of the polyp. Manual segmentation is performed on the same polyps and treated as the ground truth. The automatically generated segmentation is compared with the ground truth segmentation to validate the accuracy of the method. Experimental results showed that the average overlap between the automatic segmentation and manual segmentation is 76.3%. Given the complex polyp boundaries and the small size of the polyp, this is a good result both visually and quantitatively.
- Published
- 2003
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40. Variance reduction for error estimation when classifying colon polyps from CT colonography
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Meghan T. Miller, Anna K. Jerebko, Ronald M. Summers, and James D. Malley
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Virtual colonoscopy ,medicine.diagnostic_test ,business.industry ,Estimator ,Pattern recognition ,Support vector machine ,Reduction (complexity) ,Sample size determination ,Statistics ,medicine ,Variance reduction ,Sample variance ,Artificial intelligence ,Sensitivity (control systems) ,business ,Mathematics - Abstract
For cancer polyp detection based on CT colonography we investigate the sample variance of two methods for estimating the sensitivity and specificity. The goal is the reduction of sample variance for both error estimates, as a first step towards comparison with other detection schemes. Our detection scheme is based on a committee of support vector machines. The two estimates of sensitivity and specificity studied here are a smoothed bootstrap (the 632+ estimator), and ten-fold cross-validation. It is shown that the 632+ estimator generally has lower sample variance than the usual cross-validation estimator. When the number of nonpolyps in the training set is relatively small we obtain approximately 80% sensitivity and 50% specificity (for either method). On the other hand, when the number of nonpolyps in the training set is relatively large, estimated sensitivity (for either method) drops considerably. Finally, we consider the intertwined roles of relative sample sizes (polyp/nonpolyp), misclassification costs, and bias-variance reduction.
- Published
- 2003
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41. The Crystal Structure of the α-Neurexin-1 Extracellular Region Reveals a Hinge Point for Mediating Synaptic Adhesion and Function
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Mauro Mileni, Palmer Taylor, Meghan T. Miller, Michal Harel, Davide Comoletti, and Raymond C. Stevens
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0303 health sciences ,Cell adhesion molecule ,Plasma protein binding ,Adhesion ,Biology ,Gene mutation ,Article ,Transmembrane protein ,03 medical and health sciences ,Crystallography ,0302 clinical medicine ,Protein structure ,Structural Biology ,Extracellular ,Biophysics ,Cell adhesion ,Molecular Biology ,030217 neurology & neurosurgery ,030304 developmental biology - Abstract
Summary α- and β-neurexins (NRXNs) are transmembrane cell adhesion proteins that localize to presynaptic membranes in neurons and interact with the postsynaptic neuroligins (NLGNs). Their gene mutations are associated with the autism spectrum disorders. The extracellular region of α-NRXNs, containing nine independently folded domains, has structural complexity and unique functional characteristics, distinguishing it from the smaller β-NRXNs. We have solved the X-ray crystal structure of seven contiguous domains of the α-NRXN-1 extracellular region at 3.0 A resolution. The structure reveals an arrangement where the N-terminal five domains adopt a more rigid linear conformation and the two C-terminal domains form a separate arm connected by a flexible hinge. In an extended conformation the molecule is suitably configured to accommodate a bound NLGN molecule, as supported by structural comparison and surface plasmon resonance. These studies provide the structural basis for a multifunctional synaptic adhesion complex mediated by α-NRXN-1.
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42. Antagomir-mediated suppression of microRNA-134 reduces kainic acid-induced seizures in immature mice
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Mads Jensen, Elena Langa, Cristina R. Reschke, Aoife Campbell, Gareth Morris, Elizabeth Brindley, J. Worm, Janosch P. Heller, Meghan T. Miller, and David C. Henshall
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0301 basic medicine ,Male ,Kainic acid ,Science ,Hippocampus ,Status epilepticus ,Pharmacology ,Article ,03 medical and health sciences ,Epilepsy ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Downregulation and upregulation ,Seizures ,microRNA ,medicine ,Gene silencing ,Animals ,Antagomir ,Multidisciplinary ,Kainic Acid ,Dose-Response Relationship, Drug ,business.industry ,Antagomirs ,Brain ,medicine.disease ,MicroRNAs ,030104 developmental biology ,chemistry ,nervous system ,Medicine ,Diseases of the nervous system ,medicine.symptom ,business ,030217 neurology & neurosurgery ,Neuroscience - Abstract
MicroRNAs are short non-coding RNAs that negatively regulate protein levels and perform important roles in establishing and maintaining neuronal network function. Previous studies in adult rodents have detected upregulation of microRNA-134 after prolonged seizures (status epilepticus) and demonstrated that silencing microRNA-134 using antisense oligonucleotides, termed antagomirs, has potent and long-lasting seizure-suppressive effects. Here we investigated whether targeting microRNA-134 can reduce or delay acute seizures in the immature brain. Status epilepticus was induced in 21 day-old (P21) male mice by systemic injection of 5 mg/kg kainic acid. This triggered prolonged electrographic seizures and select bilateral neuronal death within the CA3 subfield of the hippocampus. Expression of microRNA-134 and functional loading to Argonaute-2 was not significantly changed in the hippocampus after seizures in the model. Nevertheless, when levels of microRNA-134 were reduced by prior intracerebroventricular injection of an antagomir, kainic acid-induced seizures were delayed and less severe and mice displayed reduced neuronal death in the hippocampus. These studies demonstrate targeting microRNA-134 may have therapeutic applications for the treatment of seizures in children.
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43. Proteomic analyses reveal misregulation of LIN28 expression and delayed timing of glial differentiation in human iPS cells with MECP2 loss-of-function.
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Jean J Kim, Jeffrey N Savas, Meghan T Miller, Xindao Hu, Cassiano Carromeu, Mathieu Lavallée-Adam, Beatriz C G Freitas, Alysson R Muotri, John R Yates, and Anirvan Ghosh
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Medicine ,Science - Abstract
Rett syndrome (RTT) is a pervasive developmental disorder caused by mutations in MECP2. Complete loss of MECP2 function in males causes congenital encephalopathy, neurodevelopmental arrest, and early lethality. Induced pluripotent stem cell (iPSC) lines from male patients harboring mutations in MECP2, along with control lines from their unaffected fathers, give us an opportunity to identify some of the earliest cellular and molecular changes associated with MECP2 loss-of-function (LOF). We differentiated iPSC-derived neural progenitor cells (NPCs) using retinoic acid (RA) and found that astrocyte differentiation is perturbed in iPSC lines derived from two different patients. Using highly stringent quantitative proteomic analyses, we found that LIN28, a gene important for cell fate regulation and developmental timing, is upregulated in mutant NPCs compared to WT controls. Overexpression of LIN28 protein in control NPCs suppressed astrocyte differentiation and reduced neuronal synapse density, whereas downregulation of LIN28 expression in mutant NPCs partially rescued this synaptic deficiency. These results indicate that the pathophysiology of RTT may be caused in part by misregulation of developmental timing in neural progenitors, and the subsequent consequences of this disruption on neuronal and glial differentiation.
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- 2019
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