39 results on '"McLean, Bryan S."'
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2. SNP-based phylogenomic inference in Holarctic ground squirrels (Urocitellus)
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McLean, Bryan S., Bell, Kayce C., and Cook, Joseph A.
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- 2022
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3. Orientia, Rickettsia, and the microbiome in rodent attached chiggers in North Carolina, USA.
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Richardson, Elise A., Garshong, Reuben, Chen, Kaiying, Crossley, Dac, Mclean, Bryan S., Wasserberg, Gideon, Apperson, Charles S., Roe, R. Michael, and Ponnusamy, Loganathan
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Chiggers are larval mites that pose a significant health risk globally via the spread of scrub typhus. However, fundamental studies into the bacterial microbiome in North America have never been considered. In this investigation, chiggers were collected in the wild from two locally common rodent host species (i.e., Sigmodon hispidus and Peromyscus leucopus) in three different ecoregions of North Carolina (NC), United States to investigate the composition of their bacterial communities, including potential pathogens. DNA was extracted from the chiggers, and the V3-V4 regions of the bacterial 16S rRNA gene were sequenced using next-generation sequencing (NGS). Alpha diversity metrics revealed significant differences in bacterial diversity among different collection counties. Beta diversity metrics also revealed that bacterial communities across counties were significantly different, suggesting changes in the microbiome as the environment changed. Specifically, we saw that the two western NC collection counties had similar bacterial composition as did the two eastern collection counties. In addition, we found that the chigger microbiome bacterial diversity and composition differed between rodent host species. The 16S rRNA sequence reads were assigned to 64 phyla, 106 orders, 199 families, and 359 genera. The major bacterial phylum was Actinobacteria. The most abundant species were in the genera Corynebacterium, Propionibacterium, class ZB2, and Methylobacterium. Sequences derived from potential pathogens within the genera Orientia and Rickettsia were also detected. Our findings provide the first insights into the ecology of chigger microbiomes in the US. Further research is required to determine if the potential pathogens found detected in chiggers are a threat to humans and wildlife. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Gastrointestinal morphology is an effective functional dietary proxy that predicts small mammal community structure.
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Chapman, Olivia S. and McLean, Bryan S.
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The availability and quality of food resources can alter the intensity of competition and predation pressure within communities. Understanding species capacity to respond to global change‐driven shifts in resource distribution is therefore crucial for biodiversity conservation. Small mammal communities are often structured by competition for food resources, but understanding and monitoring these processes are currently hindered by lack of functional dietary trait information in these hard‐to‐sample systems. In this study, we collected a comprehensive suite of gastrointestinal (GI) measurements from 26 small mammal species (including some never reported), compared them with more traditional craniodental traits in predicting dietary guild, and used them in a novel way to understand how diet structures 22 small mammal communities across the Appalachian Mountains of eastern North America. As predicted, we found GI traits to be effective dietary trait proxies; they were equally or more accurate than craniodental proportions in predicting the dietary guild of individual species. Furthermore, at the community level, we found that both the mean and functional dispersion of GI length were positively correlated with latitude and measures of temperature seasonality. Our results indicate that small mammal communities in more seasonal environments are filtered to include species with longer GI tracts (on average) as well as those that can partition food resources more finely, as expected based on the lower productivity of these regions. Conversely, communities in less seasonal environments display functional redundancy from the addition of species with short to intermediate GI lengths. Proportions of the GI tract represent novel dietary traits that can illuminate community assembly processes across regional environmental gradients and in the face of changing timing and availability of resources. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Digital biodiversity data sets reveal breeding phenology and its drivers in a widespread North American mammal
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McLean, Bryan S. and Guralnick, Robert P.
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- 2021
6. The next chapter of human–plague science
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McLean, Bryan S., Cook, Joseph A., Durden, Lance A., Hoberg, Eric P., and Guralnick, Robert P.
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- 2019
7. A NEW SPECIES OF SUCKING LOUSE FROM THE LONG-TAILED GROUND SQUIRREL, UROCITELLUS UNDULATUS , FROM MONGOLIA, WITH A KEY TO SPECIES, AND A REVIEW OF HOST ASSOCIATIONS AND GEOGRAPHICAL DISTRIBUTIONS OF MEMBERS OF THE GENUS LINOGNATHOIDES (PSOCODEA : ANOPLURA: POLYPLACIDAE)
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Durden, Lance A., Robinson, Chase, Cook, Joseph A., McLean, Bryan S., Nyamsuren, Batsaikhan, and Greiman, Stephen E.
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- 2019
8. Evolution of litter size in North America’s most common small mammal : an informatics-based approach
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McLean, Bryan S., Barve, Narayani, Flenniken, Jeffry, and Guralnick, Robert P.
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- 2019
9. Impacts of Inference Method and Data set Filtering on Phylogenomic Resolution in a Rapid Radiation of Ground Squirrels (Xerinae: Marmotini)
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McLean, Bryan S., Bell, Kayce C., Allen, Julie M., Helgen, Kristofer M., and Cook, Joseph A.
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- 2019
10. Mammalian body size is determined by interactions between climate, urbanization, and ecological traits
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Hantak, Maggie M., McLean, Bryan S., Li, Daijiang, and Guralnick, Robert P.
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- 2021
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11. Mammal collections of the Western Hemisphere : a survey and directory of collections
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Systematic Collections Committee of the American Society of Mammalogists, Dunnum, Jonathan L., McLean, Bryan S., and Dowler, Robert C.
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- 2018
12. Urocitellus parryii (Rodentia: Sciuridae)
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McLean, Bryan S.
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- 2018
13. Trait-specific processes of convergence and conservatism shape ecomorphological evolution in ground-dwelling squirrels
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McLean, Bryan S., Helgen, Kristofer M., Goodwin, H. Thomas, and Cook, Joseph A.
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- 2018
14. Digest : Splendid (continental) radiations
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McLean, Bryan S.
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- 2017
15. Seasonal and sex-specific changes in the gastrointestinal tracts of Peromyscus maniculatus
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Chapman, Olivia S, primary and McLean, Bryan S, additional
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- 2023
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16. Body size trends in response to climate and urbanization in the widespread North American deer mouse, Peromyscus maniculatus
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Guralnick, Robert, Hantak, Maggie M., Li, Daijiang, and McLean, Bryan S.
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- 2020
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17. New insight into drivers of mammalian litter size from individual‐level traits.
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Weller, Amanda K., Chapman, Olivia S., Gora, Sarah L., Guralnick, Robert P., and McLean, Bryan S.
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LIFE history theory ,BODY size ,MAMMAL conservation ,HUMIDITY - Abstract
The digitization and open availability of life history traits measured directly from individuals provide a key means of linking organismal function to environmental and ecological contexts at fine resolution. These linkages play a critical role in understanding trait‐mediated response to global change, with particular need to resolve them for taxa that are secretive and hard to monitor, like most mammals. In this study, we use digitized museum specimen and census data to document how climate and body size each shape a key life history trait – litter size – in 39 small mammals across North America. We employ mixed models to test associations between litter size, climate and body size, with a focus on joint estimation of inter‐ and intraspecific trends. Among species, no single climate predictor explained a large amount of litter size variation. Instead, interactions between temperature‐related (continentality, solar irradiation) and moisture‐related (annual precipitation, relative humidity) indices, along with body size, exert a stronger influence on litter size. We observed maximal litter sizes for species inhabiting seasonal or xeric regions under conditions of increased moisture availability, or conversely, mesic or aseasonal regions under conditions of reduced moisture availability. These patterns are consistent with primary productivity as a mechanistic driver of litter size. At the intraspecific level, litter size responds to continentality and temperature‐related indices experienced by populations, but is most strongly shaped by body size of individual females. We also find evidence of phylogenetic covariation in these intraspecific trends. Our study demonstrates how life history traits assembled from individual‐level biodiversity records improve precision and granularity of ecological studies, help to parse among‐ and within‐species trends, and foster improved understanding of tradeoffs between energetic supply and demand (e.g. reproduction) in wild mammals. [ABSTRACT FROM AUTHOR]
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- 2024
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18. Rapid divergence and gene flow at high latitudes shape the history of Holarctic ground squirrels (Urocitellus)
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McLean, Bryan S., Jackson, Donavan J., and Cook, Joseph A.
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- 2016
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19. Natural history collections-based research : progress, promise, and best practices
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McLean, Bryan S., Bell, Kayce C., Dunnum, Jonathan L., Abrahamson, Bethany, Colella, Jocelyn P., Deardorff, Eleanor R., Weber, Jessica A., Jones, Amanda K., Salazar-Miralles, Fernando, and Cook, Joseph A.
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- 2016
20. Sex‐specific breeding phenologies in the North American deer mouse ( Peromyscus maniculatus )
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McLean, Bryan S., primary, Barve, Narayani, additional, and Guralnick, Robert P., additional
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- 2022
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21. Responses of high-elevation herbaceous plant assemblages to low glacial CO₂ concentrations revealed by fossil marmot (Marmota) teeth
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McLean, Bryan S., Ward, Joy K., Polito, Michael J., and Emslie, Steven D.
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- 2014
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22. First record of the Holarctic least shrew (Sorex minutissimus) and associated helminths from Canada: new light on northern Pleistocene refugia
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Cook, Joseph A., McLean, Bryan S., Jackson, Donavan J., Colella, Jocelyn P., Greiman, Stephen E., Tkach, Vasyl V., Jung, Thomas S., and Dunnum, Jonathan L.
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Zoology and wildlife conservation - Abstract
We report the first Canadian record of the Holarctic least shrew (Sorex minutissimus Zimmermann, 1780) and associated helminth worms, collected along the Dempster Highway in central Yukon in 2014. We identify the specimen based on morphological characters, characterize the habitat, report other mammals and helminth species associated with this specimen, and use mitochondrial DNA sequences to place the specimen within a phylogenetic context and address Pleistocene refugial hypotheses. Although long considered an Eurasian endemic, the diminutive least shrew was first reported from Alaska in 1994. Our new record for Canada indicates that the species may occur at least as far east as the MacKenzie River and DNA variation suggests this species persisted only in the Beringian refugium in North America during the Last Glacial Maximum. The discovery of a new mammal and associated parasites for Canada points to the urgent need for more detailed information on high-latitude biotas in North America, data that are best obtained through museum-based field surveys, particularly for small, cryptic species. Key words: distribution, helminth, museum collections, Sorex minutissimus, Holarctic least shrew, Yukon. Nous signalons la premiere observation au Canada d'une musaraigne naine (Sorex minutissimus Zimmermann, 1780) holarctique et d'helminthes associes, preleves le long de la route de Dempster, dans le centre du Yukon, en 2014. Nous identifions le specimen sur la base de caracteres morphologiques, en caracterisons l'habitat, rendons compte d'autres mammiferes et especes d'helminthes associes a ce specimen et utilisons des sequences d'ADN mitochondrial pour le placer dans un contexte phylogenetique et examiner des hypotheses concernant les refuges au Pleistocene. Bien qu'elle ait longtemps ete consideree comme etant une espece endemique d'Eurasie, la musaraigne naine a ete signalee en Alaska pour la premiere fois en 1994. Notre observation de sa presence au Canada indique que l'aire de l'espece pourrait s'etendre vers l'Est au moins jusqu'au fleuve Mackenzie, et les variations d'ADN donnent a penser que cette espece n'a persiste que dans le refuge beringien en Amerique du Nord, durant le dernier maximum glaciaire. Cette decouverte d'un nouveau mammifere et de parasites associes au Canada souligne le besoin pressant de renseignements plus detailles sur les biotes de haute latitude en Amerique du Nord, des donnees qu'il est preferable d'obtenir dans le cadre d'etudes museales sur le terrain, particulierement en ce qui concerne les petites especes cryptiques. [Traduit par la Redaction] Mots-cles: repartition, helminthe, collections museales, Sorex minutissimus, musaraigne naine holarctique, Yukon., Introduction From a continental perspective, shrew (Soricomorpha: Soricidae) assemblages at high latitudes in northwestern North America are relatively species rich (Berman et al. 2007) and these assemblages have yielded a [...]
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- 2016
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23. Rickettsia felis and Other Rickettsia Species in Chigger Mites Collected from Wild Rodents in North Carolina, USA
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Ponnusamy, Loganathan, primary, Garshong, Reuben, additional, McLean, Bryan S., additional, Wasserberg, Gideon, additional, Durden, Lance A., additional, Crossley, Dac, additional, Apperson, Charles S., additional, and Roe, R. Michael, additional
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- 2022
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24. Stable isotopes reflect the ecological stability of two high-elevation mammals from the late Quaternary of Colorado
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McLean, Bryan S. and Emslie, Steven D.
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- 2012
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25. The Open-Specimen Movement
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Colella, Jocelyn P, primary, Stephens, Ryan B, additional, Campbell, Mariel L, additional, Kohli, Brooks A, additional, Parsons, Danielle J, additional, and Mclean, Bryan S, additional
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- 2020
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26. Methods for broad‐scale plant phenology assessments using citizen scientists’ photographs
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Barve, Vijay V., primary, Brenskelle, Laura, additional, Li, Daijiang, additional, Stucky, Brian J., additional, Barve, Narayani V., additional, Hantak, Maggie M., additional, McLean, Bryan S., additional, Paluh, Daniel J., additional, Oswald, Jessica A., additional, Belitz, Michael W., additional, Folk, Ryan A., additional, and Guralnick, Robert P., additional
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- 2020
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27. Urocitellus parryii
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Mclean, Bryan S.
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Urocitellus parryii ,Urocitellus ,Mammalia ,Animalia ,Sciuridae ,Rodentia ,Biodiversity ,Chordata ,Taxonomy - Abstract
Urocitellus parryii(Richardson, 1825) Arctic Ground Squirrel Arctomys parryii Richardson, 1825:316. No type locality designated, restricted to ���Five Hawser Bay, Lyon Inlet, Melville Peninsula, [Hudson Bay, Nunavut,] Canada ��� by Preble (1902:46). Spermophilus parryii: Lesson, 1827:244. Name combination. Arctomys parryi var. phaeognatha Richardson, 1829:161. Type locality ���Hudson���s Bay,��� Canada. Incorrect subsequent spelling of Arctomys parryii Richardson, 1825. Spermophilus leucostictus Brandt, 1844:379. Type locality ���regionibus versus Ochotam et Uth fluvium valde aestimatae.��� (= Khabarovsk Region, Okhotsk District, Ohota River), Eastern Siberia, Russia (translated by Pavlinov and Rossolimo 1987). Spermophilus brunniceps von Kittlitz, 1858:337. Type locality ��� Kamchatka.��� Nomen nudum. A [rctomys]. kennicottii Ross, 1861:434. Type locality ���Fort Good Hope, Mackenzie,��� Northwest Territories, Canada. Spermophilus parryi var. parryi: Allen, 1874:292. Name combination. Incorrect subsequent spelling of Arctomys parryii Richardson, 1825. Spermophilus parryi var. kodiacensis Allen, 1874:292. Type locality originally given as ���Island of Kodiac,��� Alaska, USA; restricted to ���Kodiak Island, Alaska,��� USA, based on designation of lectotype by Howell (1938:103). Incorrect subsequent spelling of Arctomys parryii Richardson, 1825. Spermophilus empetra: Allen, 1877:839. Name combination. [Spermophilus empetra] var. empetra: Allen, 1877:839. Name combination. [Spermophilus empetra] var. kodiacensis: Allen, 1877:839. Name combination. Spermophilus osgoodi Merriam, 1900:18. Type locality ���Fort Yukon, Alaska,��� USA. Spermophilus barrowensis Merriam, 1900:19. Type locality: ���Point Barrow, Alaska,��� USA. Spermophilus beringensis Merriam, 1900:20. Type locality: ���Cape Lisbourne (Coal Veins), Alaska,��� USA. Spermophilus empetra plesius Osgood, 1900:29. Type locality ���Bennett City, head of Lake Bennett, British Columbia,��� Canada. Citellus buxtoni Allen, 1903a:139. Type locality ���Gichiga, west coast of Okhotsk sea, [Magadan Oblast,] Siberia,��� Russia. Citellus stejnegeri Allen, 1903a:142. Type locality ���Near Petropaulski, southeastern Kamchatka,��� Russia. Citellus stonei Allen, 1903b:537. Type locality ���Wrangel, Alaska, ��� USA; corrected to ��� Stevana Flats, near Port Muller, Alaska Peninsula, Alaska,��� USA, by Allen (1903b:xvii). Citellus parryii: Miller and Rehn, 1903:75. Name combination. C [itellus]. plesius: Osgood, 1903:25. Name combination. Citellus plesius ablusus Osgood, 1903:25. Type locality ���Nushagak, Alaska,��� USA. C [itellus]. barrowensis: Osgood, 1903:25. Name combination. C [itellus]. kodiacensis: Osgood, 1903:26. Name combination. Citellus nebulicola Osgood, 1903:26. Type locality ���Nagai Island, Shumagin Islands, Alaska,��� USA. [Citellus] osgoodi: Osgood, 1903:27. Name combination. [Citellus parryi] kadiacensis: Trouessart, 1904:338. Name combination. Incorrect subsequent spelling of Arctomys parryii Richardson, 1825 and Spermophilus parryii var. kodiacensis Allen, 1874. [Citellus parryi] plesius: Trouessart, 1904:338. Name combination. Incorrect subsequent spelling of Arctomys parryii Richardson, 1825. [Citellus] beringensis: Trouessart, 1904:338. Name combination. Citellus (Colobotis) parryi kennicotti: Preble, 1908:162. Name combination. Incorrect subsequent spelling of Arctomys parryii Richardson, 1825 and A [rctomys]. kennicottii Ross, 1861. Colobotis buxtoni: Ognev, 1926:93. Name combination. Citellus lyratus Hall and Gilmore, 1932:396. Type locality ���Iviktook Lagoon, about 35 miles northwest of Northeast Cape, St. Lawrence Island, Bering Sea, Alaska,��� USA. Citellus eversmanni leucostictus: Chaworth-Musters, 1934:557. Name combination. Citellus (Urocitellus) eversmanni stejnegeri: Ognev, 1937:331. Name combination. Citellus (Urocitellus) eversmanni janensis Ognev, 1937:332. Type locality ���Mestnost��� Ken��r��h, v verhov��h r. ��ny, dolina reki, Verho��nskij okrug.��� Citellus parryii parryii: Howell, 1938:91. Name combination. Citellus parryii barrowensis: Howell, 1938:95. Name combination. Citellus parryii ablusus: Howell, 1938:98. Name combination. Citellus parryii buxtoni: Howell, 1938:100. Name combination. Citellus parryii nebulicola: Howell, 1938:100. Name combination. Citellus parryii lyratus: Howell, 1938:101. Name combination. [Citellus parryii] osgoodi: Heptner, 1941:25. Name combination. [Citellus parryii] leucostictus: Heptner, 1941:25. Name combination. [Citellus parryii] steinegeri: Heptner, 1941:26. Name combination. Incorrect subsequent spelling of Citellus stejnegeri Allen, 1903a. [Citellus parryii] janensis: Heptner, 1941:26. Name combination. Citellus (Urocitellus) undulatus buxtoni: Ognev, 1947:213. Name combination. Citellus (Urocitellus) undulatus stejnegeri: Ognev, 1947:214. Name combination. Citellus (Urocitellus) undulatus janensis: Ognev, 1947:215. Name combination. C [itellus]. undulatus leucostictus: Rausch, 1953:121. Name combination. Citellus undulatus parryii: Rausch, 1953:121. Name combination. Citellus undulatus barrowensis: Rausch, 1953:122. Name combination. Citellus undulatus osgoodi: Rausch, 1953:123. Name combination. Citellus undulatus plesius: Rausch, 1953:123. Name combination. Citellus undulatus ablusus: Rausch, 1953:123. Name combination. Citellus undulatus kodiacensis: Rausch, 1953:124. Name combination. Citellus undulatus lyratus: Rausch, 1953:125. Name combination. Spermophilus undulatus kennicottii: Bee and Hall, 1956:43. Name combination. Spermophilus undulatus parryii: Harper, 1956:17. Name combination. Spermophilus undulatus ablusus: Hall and Kelson, 1959:343. Name combination. Spermophilus undulatus kodiacensis: Hall and Kelson, 1959:343. Name combination. Spermophilus undulatus lyratus: Hall and Kelson, 1959:343. Name combination. Spermophilus undulatus nebulicola: Hall and Kelson, 1959:343. Name combination. Spermophilus undulatus osgoodi: Hall and Kelson, 1959:343. Name combination. Spermophilus undulatus plesius: Hall and Kelson, 1959:343. Name combination. Citellus undulatus coriakorum Portenko et al., 1963:96. Type locality ���Kamčatska�� oblast���, Kor��kskij AO, r. Ačajva��m.��� (= Russia, Kamchatka Region, Kor��kskij Autonomous District, Ačajva��m River���translated by Pavlinov and Rossolimo 1987). Citellus parryi coriacorum: Gromov et al., 1965:187. Name combination. Incorrect subsequent spelling of Arctomys parryii Richardson, 1825 and Citellus undulatus coriakorum Portenko et al., 1963. Citellus parryi tschuktschorum Chernyavsky, 1972:210. Type locality: ���sred. teč. r. Amgu��ma, Vost. Čukotka.��� (= middle reaches of the Amguema River, eastern Chukotka Peninsula, Russia���translated by Baranova and Gromov 2003). Incorrect subsequent spelling of Arctomys parryii Richardson, 1825. S [permophilus]. p [arryii]. osgoodi: Nadler et al., 1973:34. Name combination. S [permophilus]. p [arryii]. plesius: Nadler et al., 1973:34. Name combination. S [permophilus]. p [arryii]. ablusus: Nadler et al., 1973:34. Name combination. S [permophilus]. p [arryii]. lyratus: Nadler et al., 1973:34. Name combination. S [permophilus]. p [arryii]. steinegeri: Nadler et al., 1973:35. Name combination. Incorrect subsequent spelling of Citellus stejnegeri Allen, 1903a. S [permophilus]. p [arryii]. leucostictus: Nadler et al., 1973:35. Name combination. S [permophilus]. p [arryii]. janensis: Nadler et al., 1973:35. Name combination. Spermophilus parryii kennicotti: Robinson, 1973:1. Name combination. Incorrect subsequent spelling of A [rctomys]. kennicottii Ross, 1861. S [permophilus]. p [arryii]. nebulicola: Nadler and Hoffmann, 1977:748. Name combination. Urocitellus parryii: Helgen et al., 2009:297. First use of current name combination. CONTEXT AND CONTENT. Order Rodentia, suborder Sciuromorpha, family Sciuridae, subfamily Xerinae, tribe Marmotini. The following 10 subspecies and their synonyms are recognized (Helgen et al. 2009): U. p. ablusus (Osgood, 1903:25). See above; stonei (Allen) is a synonym. U. p. kennicottii (Ross, 1861:434). See above; barrowensis (Merriam) and beringensis (Merriam) are synonyms. U. p. kodiacensis (Allen, 1874:292). See above. U. p. leucostictus (Brandt, 1844:379). See above; buxtoni (Allen) and tschuktschorum (Chernyavsky) are synonyms. U. p. lyratus (Hall and Gilmore, 1932:396). See above. U. p. nebulicola (Osgood, 1903:26). See above. U. p. osgoodi (Merriam, 1900:18). See above. U. p. parryii (Richardson, 1825:316). See above; phaeognatha (Richardson) is a synonym. U. p. plesius (Osgood, 1900:29). See above. U. p. stejnegeri (Allen, 1903a:142). See above; brunniceps (von Kittlitz), coriakorum (Portenko) and janensis (Ognev) are synonyms. DIAGNOSIS Urocitellus parryii (Fig. 1) is the northernmost species within the family Sciuridae and the only sciurid with a Holarctic distribution. A quintessential high-latitude mammal and the largest species in the genus Urocitellus, U. parryii is a member of the bigeared species group of Urocitellus, all of which are larger-bodied, more mesic-adapted and have greater latitudinal distributions than their congeners. In pelage, U. parryii is the most intensely and variably colored of its congeners (except possibly U. columbianus, Columbian ground squirrel). The dorsum varies in color from pale buff or grizzled buff to ochre or rich chestnut and is more deeply colored than the unmarked venter, being noticeably flecked with white spots in all color phases. U. parryii has a more colorful head than body, with forehead darker than cheeks; shoulders, forelimbs, and hindlimbs that are unmarked but more colorfully washed than the venter; and a relatively long-haired tail that is grizzled or dark above and buffy, ochre or reddish below. Urocitellus parryii is easily distinguished from members of the small-eared group of Urocitellus based on its much greater head���body length (> 200mm) and weight (the latter approaching an order of magnitude in some individuals); longer tail (> 60 mm) and hind feet (> 40 mm); and longer, denser, and more colorful pelage. Individuals of most subspecies (except U. p. plesius) can be distinguished from other Nearctic big-eared Urocitellus (except U. columbianus) by greater weight (usually> 450 g) and longer head���body length (usually> 340 mm); darker and more colorful pelage with dorsal flecking; and longer, bushier tail. From U. columbianus, it can be distinguished primarily by its more buffy (and less reddish) coloration, but U. parryii also averages slightly larger than U. columbianus in total length (245 versus 233 mm, respectively) and tail length (55 versus 50 mm, respectively). From the Palearctic U. undulatus, long-tailed ground squirrel, with which it was formerly considered conspecific and resembles most closely, U. parryii is distinguished by a more richly colored head, bolder dorsal flecking, and greater color contrast between head and back (Krystufek and Vohralik 2013), as well as a slightly larger average total length (245 mm in U. parryii versus 220 mm in U. undulatus, respectively). U. parryii has a karyotype of 2 n = 34, distinguishing it from all other Urocitellus except for U. elegans (Wyoming ground squirrel) and U. armatus (Uinta ground squirrel). U. parryii is also easily distinguished based on geography, being nowhere sympatric with any congener. GENERAL CHARACTERS Urocitellus parryii (Fig. 1) resembles other true ground squirrels in gross external morphology in having a semicylindrical body plan, dorsoventrally compressed cranium, shortened pinnae, relatively short but stout limbs, and relatively elongated manus, pes, and digits with sharp claws. The posture of U. parryii is plantigrade; forelimbs and hindlimbs possess 4 and 5 digits, respectively. Membranous cheek pouches are present. Tail length is typically 35���50% of head���body length. Ranges of external measurements (mm) for mainland subspecies excluding U. p. plesius are as follows: total length, 340���495; tail length, 88���165; hind foot length, 52���68. Ranges of the same measurements (mm) from the more diminutive U. p. plesius are as follows: total length, 300���363; tail length, 85���105; hind foot length, 50���57. Ear length in U. parryii ranges from 10 to 21 mm. Adult weights from 450 to 1,000 g are possible, and average greater in northern than southern populations. Weights exceeding 1 kg have occasionally been reported in U. p. parryii, U. p. kennicottii, U. p. osgoodi, and U. p. leucostictus (Howell 1938; Batzli and Sobaski 1980; Buck and Barnes 1999a; Krystufek and Vohralik 2013). Sexual dimorphism exists; males average 2���4% greater in cranial dimensions (Pearson 1981), 4���10% greater in external linear measurements, and occasionally up to 10% greater in body mass than females. However, Mayer (1953) described ear lengths greater in female than in male U. p. kennicottii. Urocitellus parryii shows significant variation in pelage color across its range, which in several instances is unreflective of phylogeny. Extremes of dorsal hue are the pale buff of U. p. lyratus and some U. p. leucostictus and the dark ochre and rich chestnut of U. p. parryii and U. p. osgoodi, respectively. Amounts of dorsal flecking range from marked to diffuse; variation along this continuum can also be observed within some subspecies. The heels of U. parryii are partially to densely haired. Tail coloration is darkest in U. p. kodiacensis, U. p. parryii, and U. p. osgoodi, being nearly completely black above in some populations of the latter. Howell (1938) and Rausch (1953) gave additional pelage descriptions for most subspecies. Melanism occurs in U. p. osgoodi, U. p. plesius, and U. p. kennicottii (and possibly additional subspecies). Howell (1938) reported that about 20% of U. p. osgoodi specimens examined were melanistic. Guthrie (1967) interpreted this trait as fire melanism and suggested it was maintained by balancing selection due to the high frequency of wildfires in central Alaska. Howell (1938) detailed the distinguishing craniodental morphological characters of U. parryii. The skull (Fig. 2) is more robust and angular than in other Urocitellus, with a broader and heavier zygomatic arch, heavier postorbital processes, broader nasals, broader and more inflated auditory bullae, and a welldeveloped posterior loph of M3. Greatest length of skull and zygomatic breadth for subspecies (excluding U. p. plesius) range from 53.2 to 65.8 mm and 33.2 to 44.3 mm, respectively. Ranges of the same measurements in U. p. plesius are 50.7���56.4 mm and 32.3���35.5 mm, respectively. Additional cranial measurements (mm; mean and ranges for 6 males���Howell 1938) for the nominal subspecies U. p. parryii are as follows: cranial breadth (= breadth of braincase), 24.7 (23.5���25.5); palatal length, 31.2 (30.3���32.5); interorbital breadth, 13.4 (12.9���13.8); postorbital breadth, 13.4 (12.7���14.1); length of nasals, 23.6 (21.9���25.1); length of maxillary toothrow, 13.6 (13.2���14.1). Aging can result in cranial modification, including bone thickening, more pronounced postorbital constriction, and increased ossification of incisive foramina (Pearson 1981). Robinson and Hoffmann (1975) analyzed cranial morphology of big-eared Urocitellus in a multivariate context; although their study included only 2 subspecies of U. parryii (U. p. kennicottii and U. p. leucostictus), cluster analyses recovered greater shape differences between those subspecies than among some species pairs of big-eared Urocitellus. Cranial size, pronouncement of temporal ridges, length of nasals, and relative development of the posterior loph of M3 are variable among some subspecies of U. parryii (Howell 1938); a list of other variable mensural characters can be found in Pearson (1981). The skull characters that best distinguish U. p. kennicottii from the Palearctic U. p. leucostictus were given by Robinson (1973). Interspecific variation in cranial morphology of big-eared Urocitellus is strongly allometric and also correlated with latitude (Robinson and Hoffmann 1975). Similarly, intraspecific cranial variation among Nearctic U. parryii is broadly correlated with latitude, as well as with temperature and precipitation (Pearson 1981); larger forms are found in coolest and driest conditions. No significant cranial variability was found in Siberian U. parryii (Vorontsov et al. 1984). Cranial size in male (but not female) U. parryii is negatively correlated with elevation (Pearson 1981). Cranial size in female (but not male) U. parryii on islands is positively correlated with island area, temperature, and precipitation (Pearson 1981). U. parryii appears to have experienced rapid rates of evolution in molariform tooth size and shape relative to other marmotine ground squirrels (Goodwin 2009). FORM AND FUNCTION Form. ��� Urocitellus parr, Published as part of Mclean, Bryan S., 2018, Urocitellus parryii (Rodentia: Sciuridae), pp. 84-99 in Mammalian Species 50 (964) on pages 84-96, DOI: 10.1093/mspecies/sey011, http://zenodo.org/record/4573557, {"references":["RICHARDSON, J. 1825. Appendix to Captain Parry's Journal of a Second Voyage for the Discovery of a Northwest Passage from the Atlantic to the Pacific, performed in His Majesty's ships Fury and Hecla, in the years 1821 - 22 - 23. John Murray, London, United Kingdom.","PREBLE, E. A. 1902. A biological investigation of the Hudson Bay region. North American Fauna 22. Government Printing Office, Washington, D. C.","LESSON, R. - P. 1827. Manuel de Mammalogie, ou Histoire Naturelle des Mammiferes. Roret, Paris, France.","RICHARDSON, J. 1829. Fauna Boreali-Americana, or, The Zoology of the Northern Parts of British America. John Murray, London, United Kingdom.","BRANDT, J. F. 1844. 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28. Mammal collections of the Western Hemisphere: A survey and directory of collections
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Dunnum, Jonathan L., McLean, Bryan S., Dowler, Robert C., Álvarez-Castañeda, Sergio Ticul, Bradley, Jeff E., Bradley, Robert D., Carraway, Leslie N., Carrera-E, Juan P., Conroy, Chris John, Coyner, Brandi S., Demboski, John R., Dick, Carl W., Doyle, Kate, Esselstyn, Jacob A., Gutiérrez, Eliécer E., Hanson, John Delton, Holahan, Paula M., Holmes, Thorvald, Iudica, Carlos A., Leite, Rafael N., Lee, Thomas E., Lim, Burton K., Malaney, Jason L., McLaren, Suzanne B., Moncrief, Nancy D., Olson, Link E., Ordóñez-Garza, Nicté, Phillips, Caleb D., Revelez, Marcia A., Rickart, Eric A., Rogers, Duke S., Thompson, Cody W., Upham, Nathan S., and Velazco, Paúl M.
- Subjects
0106 biological sciences ,0301 basic medicine ,specimen ,Resource (biology) ,Survey Method ,natural history collections ,Type Specimen ,Library science ,Directory ,Growth ,infrastructure ,010603 evolutionary biology ,01 natural sciences ,Mammal ,Genetic Resources ,Database ,03 medical and health sciences ,Geographical Region ,Genetics ,Museum ,Taxonomic rank ,biorepository ,Temporal Variation ,database ,Ecology, Evolution, Behavior and Systematics ,Digitization ,biodiversity ,Nature and Landscape Conservation ,Taxonomy ,Western hemisphere ,Ecology ,Western Hemisphere ,museum ,Biodiversity ,Feature Articles ,genetic resources ,030104 developmental biology ,Geography ,Biorepository ,Spatial Variation ,collection management ,Mammalia ,Animal Science and Zoology ,voucher ,Web accessibility - Abstract
As a periodic assessment of the mammal collection resource, the Systematic Collections Committee (SCC) of the American Society of Mammalogists undertakes decadal surveys of the collections held in the Western Hemisphere. The SCC surveyed 429 collections and compiled a directory of 395 active collections containing 5,275,155 catalogued specimens. Over the past decade, 43 collections have been lost or transferred and 38 new or unsurveyed collections were added. Growth in number of total specimens, expansion of genomic resource collections, and substantial gains in digitization and web accessibility were documented, as well as slight shifts in proportional representation of taxonomic groups owing to increasingly balanced geographic representation of collections relative to previous surveys. While we find the overall health of Western Hemisphere collections to be adequate in some areas, gaps in spatial and temporal coverage and clear threats to long-term growth and vitality of these resources have also been identified. Major expansion of the collective mammal collection resource along with a recommitment to appropriate levels of funding will be required to meet the challenges ahead for mammalogists and other users, and to ensure samples are broad and varied enough that unanticipated future needs can be powerfully addressed.Aproximadamente cada 10 años, el Comité de Colecciones Sistemáticas (CCS) de la Sociedad Americana de Mastozoologia, evalúa el estado de las colecciones mastozoológicas del hemisferio occidental. En el último censo, el CCS encuestó un total de 429 colecciones y compiló un directorio de 395 colecciones activas que contenían 5,275,155 especímenes catalogados. En comparación con el censo previo, durante la última década 43 colecciones se han cerrado o han sido absorbidas, pero se agregaron al censo 38 nuevas colecciones. Se documentó un incremento en el número total de especímenes, la expansión de la disponibilidad de colecciones de recursos genómicos, además de avances substanciales en digitalización y accesibilidad a la web. También, se detectaron cambios en las proporciones de grupos taxonómicos debido a la representación geográfica cada vez más equilibrada de las colecciones en comparación con encuestas anteriores. Si bien consideramos que las colecciones del hemisferio occidental estan en buen estado en algunas áreas, también identificamos brechas claras en la cobertura espacial y temporal, así como amenazas al crecimiento y vitalidad de estos recursos a largo plazo. Un crecimiento substancial, acompañado de compromisos de adecuado financiamiento, serán necesarios para asegurar que las colecciones incluyan muestras lo suficientemente amplias y variadas como para permitir a mastozoologos y otros científicos abordar las necesidades, muchas de ellas imprevistas, que traerá el futuro.
- Published
- 2018
29. Methods for broad-scale plant phenology assessments using citizen scientists’ photographs
- Author
-
Barve, Vijay V., primary, Brenskelle, Laura, additional, Li, Daijiang, additional, Stucky, Brian J., additional, Barve, Narayani V., additional, Hantak, Maggie M., additional, McLean, Bryan S., additional, Paluh, Daniel J., additional, Oswald, Jessica A., additional, Belitz, Michael, additional, Folk, Ryan, additional, and Guralnick, Robert, additional
- Published
- 2019
- Full Text
- View/download PDF
30. The Open-Specimen Movement.
- Author
-
Colella, Jocelyn P, Stephens, Ryan B, Campbell, Mariel L, Kohli, Brooks A, Parsons, Danielle J, and Mclean, Bryan S
- Subjects
BIOLOGICAL specimens ,DATA management ,LIFE sciences ,DATA security ,DATA plans ,AGRICULTURAL extension work - Abstract
The open-science movement seeks to increase transparency, reproducibility, and access to scientific data. As primary data, preserved biological specimens represent records of global biodiversity critical to research, conservation, national security, and public health. However, a recent decrease in specimen preservation in public biorepositories is a major barrier to open biological science. As such, there is an urgent need for a cultural shift in the life sciences that normalizes specimen deposition in museum collections. Museums embody an open-science ethos and provide long-term research infrastructure through curation, data management and security, and community-wide access to samples and data, thereby ensuring scientific reproducibility and extension. We propose that a paradigm shift from specimen ownership to specimen stewardship can be achieved through increased open-data requirements among scientific journals and institutional requirements for specimen deposition by funding and permitting agencies, and through explicit integration of specimens into existing data management plan guidelines and annual reporting. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
31. Impacts of Inference Method and Data set Filtering on Phylogenomic Resolution in a Rapid Radiation of Ground Squirrels (Xerinae: Marmotini)
- Author
-
Mclean, Bryan S, primary, Bell, Kayce C, additional, Allen, Julie M, additional, Helgen, Kristofer M, additional, and Cook, Joseph A, additional
- Published
- 2018
- Full Text
- View/download PDF
32. Pattern and Process in the Radiation of Ground-dwelling Squirrels
- Author
-
Joseph Cook, Steven Poe, Felisa Smith, James Degnan, McLean, Bryan S, Joseph Cook, Steven Poe, Felisa Smith, James Degnan, and McLean, Bryan S
- Subjects
- Biology
- Abstract
What causes biological diversity to be unevenly apportioned across the Tree of Life? The pattern is widespread and well-characterized; but our understanding of processes underlying the taxonomic, phenotypic, and ecological disparities of clades remains incomplete. At least some of this disparity is due to clade-specific differences in the ability to respond to ecological opportunity, whereby access to, and exploitation of, different resources in ecological time drives evolutionary divergence and adaptive radiation. However, not all clades respond equivalently to ecological opportunity, and considerable heterogeneity therefore exists in diversification patterns across radiations. This dissertation focuses on patterns and processes of diversification in ground-dwelling squirrels of the tribe Marmotini. It seeks to infer phylogeny and describe variation in ecological and phenotypic traits (patterns) and, ultimately, to relate those to the developmental, environmental, and evolutionary factors shaping them (processes). It integrates molecular, morphological, and environmental datasets derived from museum specimens at two taxonomic levels (across the entire tribe and within the genus Urocitellus). Results at each level are evaluated in the context of current evolutionary theory and practice, and these are used to determine whether evolutionary themes exist in marmotine radiation transcending taxonomic and phylogenetic scales.
- Published
- 2017
33. The Beringian Coevolution Project: holistic collections of mammals and associated parasites reveal novel perspectives on evolutionary and environmental change in the North
- Author
-
Cook, Joseph A., primary, Galbreath, Kurt E., additional, Bell, Kayce C., additional, Campbell, Mariel L., additional, Carrière, Suzanne, additional, Colella, Jocelyn P., additional, Dawson, Natalie G., additional, Dunnum, Jonathan L., additional, Eckerlin, Ralph P., additional, Fedorov, Vadim, additional, Greiman, Stephen E., additional, Haas, Genevieve M.S., additional, Haukisalmi, Voitto, additional, Henttonen, Heikki, additional, Hope, Andrew G., additional, Jackson, Donavan, additional, Jung, Thomas S., additional, Koehler, Anson V., additional, Kinsella, John M., additional, Krejsa, Dianna, additional, Kutz, Susan J., additional, Liphardt, Schuyler, additional, MacDonald, S. O., additional, Malaney, Jason L., additional, Makarikov, Arseny, additional, Martin, Jon, additional, McLean, Bryan S., additional, Mulders, Robert, additional, Nyamsuren, Batsaikhan, additional, Talbot, Sandra L., additional, Tkach, Vasyl V., additional, Tsvetkova, Albina, additional, Toman, Heather M., additional, Waltari, Eric C., additional, Whitman, Jackson S., additional, and Hoberg, Eric P., additional
- Published
- 2017
- Full Text
- View/download PDF
34. Mammal collections of the Western Hemisphere: a survey and directory of collections.
- Author
-
Mammalogists, Systematic Collections Committee of the American Society of, Dunnum, Jonathan L, McLean, Bryan S, and Dowler, Robert C
- Subjects
MAMMAL surveys ,COLLECTION & preservation of biological specimens ,ANIMAL classification ,GENOMICS ,BIODIVERSITY - Abstract
Copyright of Journal of Mammalogy is the property of Oxford University Press / USA and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2018
- Full Text
- View/download PDF
35. Impacts of late Quaternary environmental change on the long-tailed ground squirrel (Urocitellus undulatus) in Mongolia.
- Author
-
McLean, Bryan S., Nyamsuren, Batsaikhan, Tchabovsky, Andrey, and Cook, Joseph A.
- Subjects
GROUND squirrels ,QUATERNARY paleoclimatology ,MOLECULAR biology ,PHYLOGEOGRAPHY ,CYTOCHROME oxidase - Abstract
Impacts of Quaternary environmental changes on mammal faunas of central Asia remain poorly understood due to a lack of comprehensive phylogeographic sampling for most species. To help address this knowledge gap, we conducted the most extensive molecular analysis to date of the long-tailed ground squirrel (Urocitellus undulatus Pallas 1778) in Mongolia, a country that comprises the southern core of this species’ range. Drawing on material from recent collaborative field expeditions, we genotyped 128 individuals at two mitochondrial genes (cytochrome b and cytochrome oxidase I; 1 797 bp total). Phylogenetic inference supports the existence of two deeply divergent infraspecific lineages (corresponding to subspecies U. u. undulatus and U. u. eversmanni), a result in agreement with previous molecular investigations but discordant with patterns of range-wide craniometric and external phenotypic variation. In the widespread western eversmanni lineage, we recovered geographically-associated clades from the: (a) Khangai, (b) Mongolian Altai, and (c) Govi Altai mountain ranges. Phylogeographic structure in U. u. eversmanni is consistent with an isolation-by- distance model; however, genetic distances are significantly lower than among subspecies, and intra-clade relationships are largely unresolved. The latter patterns, as well as the relatively higher nucleotide polymorphism of populations from the Great Lakes Depression of northwestern Mongolia, suggest a history of range shifts into these lowland areas in response to Pleistocene glaciation and environmental change, followed by upslope movements and mitochondrial lineage sorting with Holocene aridification. Our study illuminates possible historical mechanisms responsible for U. undulatus genetic structure and contributes to a framework for ongoing exploration of mammalian response to past and present climate change in central Asia. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
36. Natural history collections-based research: progress, promise, and best practices
- Author
-
McLean, Bryan S., primary, Bell, Kayce C., primary, Dunnum, Jonathan L., primary, Abrahamson, Bethany, primary, Colella, Jocelyn P., primary, Deardorff, Eleanor R., primary, Weber, Jessica A., primary, Jones, Amanda K., primary, Salazar-Miralles, Fernando, primary, and Cook, Joseph A., primary
- Published
- 2015
- Full Text
- View/download PDF
37. Mammal collections of the Western Hemisphere: a survey and directory of collections.
- Author
-
Dunnum, Jonathan L, McLean, Bryan S, and Dowler, Robert C
- Abstract
As a periodic assessment of the mammal collection resource, the Systematic Collections Committee (SCC) of the American Society of Mammalogists undertakes decadal surveys of the collections held in the Western Hemisphere. The SCC surveyed 429 collections and compiled a directory of 395 active collections containing 5,275,155 catalogued specimens. Over the past decade, 43 collections have been lost or transferred and 38 new or unsurveyed collections were added. Growth in number of total specimens, expansion of genomic resource collections, and substantial gains in digitization and web accessibility were documented, as well as slight shifts in proportional representation of taxonomic groups owing to increasingly balanced geographic representation of collections relative to previous surveys. While we find the overall health of Western Hemisphere collections to be adequate in some areas, gaps in spatial and temporal coverage and clear threats to long-term growth and vitality of these resources have also been identified. Major expansion of the collective mammal collection resource along with a recommitment to appropriate levels of funding will be required to meet the challenges ahead for mammalogists and other users, and to ensure samples are broad and varied enough that unanticipated future needs can be powerfully addressed.
- Published
- 2018
- Full Text
- View/download PDF
38. Urocitellus parryii(Rodentia: Sciuridae)
- Author
-
McLean, Bryan S
- Abstract
Urocitellus parryii(Richardson, 1825) is a high-latitude sciurid known as the Arctic ground squirrel. The largest of 12 species in the genus Urocitellus, its range extends farther north than any other species of squirrel. It is also the only member of family Sciuridae with a Holarctic distribution. U. parryiiis colonial and a conspicuous inhabitant of tundra, meadows, and boreal forests across large tracts of Canada, Alaska, and eastern Siberia. Although the subject of significant research in some parts of its geographic range, aspects of U. parryiibiology remain understudied in others, a trend that further characterizes its representation in museum collections both spatially and temporally. Although U. parryiiis not currently of conservation concern (listed as “Least Concern” by the International Union for Conservation of Nature and Natural Resources), filling remaining knowledge gaps will be an important component of continued persistence given predicted scenarios of environmental change.
- Published
- 2018
- Full Text
- View/download PDF
39. Pattern and Process in the Radiation of Ground-dwelling Squirrels
- Author
-
McLean, Bryan S
- Subjects
- Biology, Ecology and Evolutionary Biology
- Abstract
What causes biological diversity to be unevenly apportioned across the Tree of Life? The pattern is widespread and well-characterized; but our understanding of processes underlying the taxonomic, phenotypic, and ecological disparities of clades remains incomplete. At least some of this disparity is due to clade-specific differences in the ability to respond to ecological opportunity, whereby access to, and exploitation of, different resources in ecological time drives evolutionary divergence and adaptive radiation. However, not all clades respond equivalently to ecological opportunity, and considerable heterogeneity therefore exists in diversification patterns across radiations. This dissertation focuses on patterns and processes of diversification in ground-dwelling squirrels of the tribe Marmotini. It seeks to infer phylogeny and describe variation in ecological and phenotypic traits (patterns) and, ultimately, to relate those to the developmental, environmental, and evolutionary factors shaping them (processes). It integrates molecular, morphological, and environmental datasets derived from museum specimens at two taxonomic levels (across the entire tribe and within the genus Urocitellus). Results at each level are evaluated in the context of current evolutionary theory and practice, and these are used to determine whether evolutionary themes exist in marmotine radiation transcending taxonomic and phylogenetic scales.
- Published
- 2017
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