721 results on '"McCarthy, Michael C."'
Search Results
2. Astrochemical Modeling of Propargyl Radical Chemistry in TMC-1
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Byrne, Alex N., Xue, Ci, Cooke, Ilsa R., McCarthy, Michael C., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
Recent detections of aromatic species in dark molecular clouds suggest formation pathways may be efficient at very low temperatures and pressures, yet current astrochemical models are unable to account for their derived abundances, which can often deviate from model predictions by several orders of magnitude. The propargyl radical, a highly abundant species in the dark molecular cloud TMC- 1, is an important aromatic precursor in combustion flames and possibly interstellar environments. We performed astrochemical modeling of TMC-1 using the three-phase gas-grain code NAUTILUS and an updated chemical network, focused on refining the chemistry of the propargyl radical and related species. The abundance of the propargyl radical has been increased by half an order of magnitude compared to the previous GOTHAM network. This brings it closer in line with observations, but it remains underestimated by two orders of magnitude compared to its observed value. Predicted abundances for the chemically related C4H3N isomers within an order of magnitude of observed values corroborate the high efficiency of CN addition to closed-shell hydrocarbons under dark molecular cloud conditions. The results of our modeling provide insight into the chemical processes of the propargyl radical in dark molecular clouds and highlight the importance of resonance-stabilized radicals in PAH formation., Comment: 31 pages and 17 figures (including the appendix), accepted for publication in The Astrophysical Journal
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- 2023
3. Detection of Interstellar $E$-1-cyano-1,3-butadiene in GOTHAM Observations of TMC-1
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Cooke, Ilsa R., Xue, Ci, Changala, P. Bryan, Shay, Hannah Toru, Byrne, Alex N., Tang, Qi Yu, Fried, Zachary T. P., Lee, Kin Long Kelvin, Loomis, Ryan A., Lamberts, Thanja, Remijan, Anthony, Burkhardt, Andrew M., Herbst, Eric, McCarthy, Michael C., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
We report the detection of the lowest energy conformer of $E$-1-cyano-1,3-butadiene ($E$-1-C$_4$H$_5$CN), a linear isomer of pyridine, using the fourth data reduction of the GOTHAM deep spectral survey toward TMC-1 with the 100 m Green Bank Telescope. We performed velocity stacking and matched filter analyses using Markov chain Monte Carlo simulations and find evidence for the presence of this molecule at the 5.1$\sigma$ level. We derive a total column density of $3.8^{+1.0}_{-0.9}\times 10^{10}$ cm$^{-2}$, which is predominantly found toward two of the four velocity components we observe toward TMC-1. We use this molecule as a proxy for constraining the gas-phase abundance of the apolar hydrocarbon 1,3-butadiene. Based on the three-phase astrochemical modeling code NAUTILUS and an expanded chemical network, our model underestimates the abundance of cyano-1,3-butadiene by a factor of 19, with a peak column density of $2.34 \times 10^{10}\ \mathrm{cm}^{-2}$ for 1,3-butadiene. Compared to the modeling results obtained in previous GOTHAM analyses, the abundance of 1,3-butadiene is increased by about two orders of magnitude. Despite this increase, the modeled abundances of aromatic species do not appear to change and remain underestimated by 1--4 orders of magnitude. Meanwhile, the abundances of the five-membered ring molecules increase proportionally with 1,3-butadiene by two orders of magnitudes. We discuss implications for bottom-up formation routes to aromatic and polycyclic aromatic molecules.
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- 2023
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4. Astronomical Detection of the Interstellar Anion C10H- towards TMC-1 from the GOTHAM Large Program on the GBT
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Remijan, Anthony, Scolati, Haley N., Burkhardt, Andrew M., Changala, P. Bryan, Charnley, Steven B., Cooke, Ilsa R., Cordiner, Martin A., Gupta, Harshal, Herbst, Eric, Lee, Kin Long Kelvin, Loomis, Ryan, Shingledecker, Christopher N., Siebert, Mark A., Xue, Ci, McCarthy, Michael C., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Instrumentation and Methods for Astrophysics ,A.1 - Abstract
Using data from the GOTHAM (GBT Observations of TMC-1: Hunting for Aromatic Molecules) survey, we report the first astronomical detection of the C10H- anion. The astronomical observations also provided the necessary data to refine the spectroscopic parameters of C10H-. From the velocity stacked data and the matched filter response, C10H- is detected at >9{\sigma} confidence level at a column density of 4.04e11 cm-2. A dedicated search for the C10H radical was also conducted towards TMC-1. In this case, the stacked molecular emission of C10H was detected at a ~3.2{\sigma} confidence interval at a column density of 2.02e11 cm-2. However, since the determined confidence level is currently <5{\sigma}, we consider the identification of C10H as tentative. The full GOTHAM dataset was also used to better characterize the physical parameters including column density, excitation temperature, linewidth, and source size for the C4H, C6H and C8H radicals and their respective anions, and the measured column densities were compared to the predictions from a gas/grain chemical formation model and from a machine learning analysis. Given the measured values, the C10H-/C10H column density ratio is ~2.0 - the highest value measured between an anion and neutral species to date. Such a high ratio is at odds with current theories for interstellar anion chemistry. For the radical species, both models can reproduce the measured abundances found from the survey; however, the machine learning analysis matches the detected anion abundances much better than the gas/grain chemical model, suggesting that the current understanding of the formation chemistry of molecular anions is still highly uncertain., Comment: 38 Pages, 24 Figures, 12 Tables, 8 Appendices
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- 2023
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5. Modalities of Belief in Ancient Christian Debate
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McCarthy, Michael C.
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- 2009
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6. Cortical microtubules contribute to division plane positioning during telophase in maize
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Bellinger, Marschal A, Uyehara, Aimee N, Allsman, Lindy, Martinez, Pablo, McCarthy, Michael C, and Rasmussen, Carolyn G
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Biochemistry and Cell Biology ,Biological Sciences ,Zea mays ,Cytokinesis ,Telophase ,Arabidopsis ,Microtubules ,Mitosis ,Genetics ,Plant Biology ,Plant Biology & Botany ,Plant biology - Abstract
Cell divisions are accurately positioned to generate cells of the correct size and shape. In plant cells, the new cell wall is built in the middle of the cell by vesicles trafficked along an antiparallel microtubule and a microfilament array called the phragmoplast. The phragmoplast expands toward a specific location at the cell cortex called the division site, but how it accurately reaches the division site is unclear. We observed microtubule arrays that accumulate at the cell cortex during the telophase transition in maize (Zea mays) leaf epidermal cells. Before the phragmoplast reaches the cell cortex, these cortical-telophase microtubules transiently interact with the division site. Increased microtubule plus end capture and pausing occur when microtubules contact the division site-localized protein TANGLED1 or other closely associated proteins. Microtubule capture and pausing align the cortical microtubules perpendicular to the division site during telophase. Once the phragmoplast reaches the cell cortex, cortical-telophase microtubules are incorporated into the phragmoplast primarily by parallel bundling. The addition of microtubules into the phragmoplast promotes fine-tuning of the positioning at the division site. Our hypothesis is that division site-localized proteins such as TANGLED1 organize cortical microtubules during telophase to mediate phragmoplast positioning at the final division plane.
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- 2023
7. Discovery of Interstellar 2-Cyanoindene (2-C$_9$H$_7$CN) in GOTHAM Observations of TMC-1
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Sita, Madelyn L., Changala, P. Bryan, Xue, Ci, Burkhardt, Andrew M., Shingledecker, Christopher N., Lee, Kin Long Kelvin, Loomis, Ryan A., Momjian, Emmanuel, Siebert, Mark A., Gupta, Divita, Herbst, Eric, Remijan, Anthony J., McCarthy, Michael C., Cooke, Ilsa R., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
We present laboratory rotational spectroscopy of five isomers of cyanoindene (2-, 4-, 5-, 6-, and 7-cyanoindene) using a cavity Fourier-transform microwave spectrometer operating between 6-40 GHz. Based on these measurements, we report the detection of 2-cyanoindene (1H-indene-2-carbonitrile; 2-C$_9$H$_7$CN) in GOTHAM line survey observations of the dark molecular cloud TMC-1 using the Green Bank Telescope at centimeter wavelengths. Using a combination of Markov Chain Monte Carlo (MCMC), spectral stacking, and matched filtering techniques, we find evidence for the presence of this molecule at the 6.3$\sigma$ level. This provides the first direct observation of the ratio of a cyano-substituted polycyclic aromatic hydrocarbon (PAH) to its pure hydrocarbon counterpart, in this case indene, in the same source. We discuss the possible formation chemistry of this species, including why we have only detected one of the isomers in TMC-1. We then examine the overall hydrocarbon:CN-substituted ratio across this and other simpler species, as well as compare to those ratios predicted by astrochemical models. We conclude that while astrochemical models are not yet sufficiently accurate to reproduce absolute abundances of these species, they do a good job at predicting the ratios of hydrocarbon:CN-substituted species, further solidifying -CN tagged species as excellent proxies for their fully-symmetric counterparts., Comment: Accepted in ApJL
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- 2022
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8. CH3-Terminated Carbon Chains in the GOTHAM Survey of TMC-1: Evidence of Interstellar CH3C7N
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Siebert, Mark A., Lee, Kin Long Kelvin, Remijan, Anthony J., Burkhardt, Andrew M., Loomis, Ryan A., McCarthy, Michael C., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
We report a systematic study of all known methyl carbon chains toward TMC-1 using the second data release of the GOTHAM survey, as well as a search for larger species. Using Markov-Chain Monte Carlo simulations and spectral line stacking of over 30 rotational transitions, we report statistically significant emission from methylcyanotriacetylene (CH$_3$C$_7$N) at a confidence level of 4.6$\sigma$, and use it to derive a column density of ${\sim}$10$^{11}$ cm$^{-2}$. We also searched for the related species, methyltetraacetylene (CH$_3$C$_8$H), and place upper limits on the column density of this molecule. By carrying out the above statistical analyses for all other previously detected methyl-terminated carbon chains that have emission lines in our survey, we assess the abundances, excitation conditions, and formation chemistry of methylpolyynes (CH3C$_{2n}$H) and methylcyanopolyynes (CH3C$_{2n-1}$N) in TMC-1, and compare those with predictions from a chemical model. Based on our observed trends in column density and relative populations of the A and E nuclear spin isomers, we find that the methylpolyynes and methylcyanopolyynes families exhibit stark differences from one another, pointing to separate interstellar formation pathways, which is confirmed through gas-grain chemical modeling with nautilus., Comment: 15 pages, 7 figures. Accepted for publication in ApJ
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- 2021
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9. Augustine in His Own Words (review)
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McCarthy, Michael C.
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- 2011
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10. Machine Learning of Interstellar Chemical Inventories
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Lee, Kin Long Kelvin, Patterson, Jacqueline, Burkhardt, Andrew M., Vankayalapati, Vivek, McCarthy, Michael C., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies ,Physics - Chemical Physics - Abstract
The characterization of interstellar chemical inventories provides valuable insight into the chemical and physical processes in astrophysical sources. The discovery of new interstellar molecules becomes increasingly difficult as the number of viable species grows combinatorially, even when considering only the most thermodynamically stable. In this work, we present a novel approach for understanding and modeling interstellar chemical inventories by combining methodologies from cheminformatics and machine learning. Using multidimensional vector representations of molecules obtained through unsupervised machine learning, we show that identification of candidates for astrochemical study can be achieved through quantitative measures of chemical similarity in this vector space, highlighting molecules that are most similar to those already known in the interstellar medium. Furthermore, we show that simple, supervised learning regressors are capable of reproducing the abundances of entire chemical inventories, and predict the abundance of not yet seen molecules. As a proof-of-concept, we have developed and applied this discovery pipeline to the chemical inventory of a well-known dark molecular cloud, the Taurus Molecular Cloud 1 (TMC-1); one of the most chemically rich regions of space known to date. In this paper, we discuss the implications and new insights machine learning explorations of chemical space can provide in astrochemistry., Comment: 20 pages; 8 figures, 2 tables in the main text. 6 figures, 2 tables in the appendix. Accepted for publication in The Astrophysical Journal Letters. Molecule recommendations for TMC-1 can be found in the Zenodo repository: https://zenodo.org/record/5146276
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- 2021
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11. Laboratory rotational spectroscopy of the magnesium-carbon chains MgC[formula omitted]H and MgC[formula omitted]N
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Changala, P. Bryan, Genossar-Dan, Nadav, Baraban, Joshua H., and McCarthy, Michael C.
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- 2024
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12. Leo the Great and the Spiritual Rebuilding of Rome (review)
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McCarthy, Michael C.
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- 2009
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13. Discovery of the Pure Polycyclic Aromatic Hydrocarbon Indene ($c$-C$_9$H$_8$) with GOTHAM Observations of TMC-1
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Burkhardt, Andrew M., Lee, Kin Long Kelvin, Changala, P. Bryan, Shingledecker, Christopher N., Cooke, Ilsa R., Loomis, Ryan A., Wei, Hongji, Charnley, Steven B., Herbst, Eric, McCarthy, Michael C., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
Polycyclic Aromatic Hydrocarbons (PAHs) have long been invoked in the study of interstellar and protostellar sources, but the unambiguous identification of any individual PAH has proven elusive until very recently. As a result, the formation mechanisms for this important class of molecules remain poorly constrained. Here we report the first interstellar detection of a pure hydrocarbon PAH, indene (C$_9$H$_8$), as part of the GBT Observations of TMC-1: Hunting for Aromatic Molecules (GOTHAM) survey. This detection provides a new avenue for chemical inquiry, complementing the existing detections of CN-functionalized aromatic molecules. From fitting the GOTHAM observations, indene is found to be the most abundant organic ring detected in TMC-1 to date. And from astrochemical modeling with NAUTILUS, the observed abundance is greater than the model's prediction by several orders of magnitude suggesting that current formation pathways in astrochemical models are incomplete. The detection of indene in relatively high abundance implies related species such as cyanoindene, cyclopentadiene, toluene, and styrene may be detectable in dark clouds., Comment: 18 pages, 2 figures and 3 tables in the main text. 1 table and 1 figure in the Appendix. Published in The Astrophysical Journal Letters. Supplementary data available in the DataVerse entry provided in text
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- 2021
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14. Detection of Two Interstellar Polycyclic Aromatic Hydrocarbons via Spectral Matched Filtering
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McGuire, Brett A., Loomis, Ryan A., Burkhardt, Andrew M., Lee, Kin Long Kelvin, Shingledecker, Christopher N., Charnely, Steven B., Cooke, Ilsa R., Cordiner, Martin A., Herbst, Eric, Kalenskii, Sergei, Siebert, Mark A., Willis, Eric R., Xue, Ci, Remijan, Anthony J., and McCarthy, Michael C.
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Astrophysics - Astrophysics of Galaxies - Abstract
Ubiquitous unidentified infrared emission bands are seen in many astronomical sources. Although these bands are widely, if not unanimously, attributed to the collective emission from polycyclic aromatic hydrocarbons, no single species from this class has been detected in space. We present the discovery of two -CN functionalized polycyclic aromatic hydrocarbons, 1- and 2-cyanonaphthalene, in the interstellar medium aided by spectral matched filtering. Using radio observations with the Green Bank Telescope, we observe both bi-cyclic ring molecules in the molecular cloud TMC-1. We discuss potential in situ gas-phase formation pathways from smaller organic precursor molecules.
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- 2021
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15. Aromatics and Cyclic Molecules in Molecular Clouds: A New Dimension of Interstellar Organic Chemistry
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McCarthy, Michael C. and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
Astrochemistry lies at the nexus of astronomy, chemistry, and molecular physics. On the basis of precise laboratory data, a rich collection of more than 200 familiar and exotic molecules have been identified in the interstellar medium, the vast majority by their unique rotational fingerprint. Despite this large body of work, there is scant evidence in the radio band for the basic building blocks of chemistry on earth -- five and six-membered rings -- despite long standing and sustained efforts during the past 50 years. In contrast, a peculiar structural motif, highly unsaturated carbon in a chain-like arrangement, is instead quite common in space. The recent astronomical detection of cyanobenzene, the simplest aromatic nitrile, in the dark molecular cloud TMC-1, and soon afterwards in additional pre-stellar, and possibly protostellar sources, establishes that aromatic chemistry is likely widespread in the earliest stages of star formation. The subsequent discovery of cyanocyclopentadienes and even cyanonapthlenes in TMC-1 provides further evidence that organic molecules of considerable complexity are readily synthesized in regions with high visual extinction but where the low temperature and pressure are remarkably low. This review focuses on laboratory efforts now underway to understand the rich transition region between linear and planar carbon structures using microwave spectroscopy. We present key features, advantages, and disadvantages of current detection methods, a discussion of the types of molecules found in space and in the laboratory, and approaches under development to identify entirely new species in complex mixtures. Studies focusing on the cyanation of hydrocarbons and the formation of benzene from acyclic precursors are highlighted, as is the role that isotopic studies might play in elucidating the chemical pathways to ring formation., Comment: Journal of Physical Chemistry A, accepted
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- 2021
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16. Rotational detection of the silicon-carbon chains H2C3Si and HSiCCH
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McCarthy, Michael C., Changala, P. Bryan, and Carroll, P. Brandon
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- 2024
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17. Interstellar Detection of 2-Cyanocyclopentadiene, C$_5$H$_5$CN, a Second Five-Membered Ring Toward TMC-1
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Lee, Kin Long Kelvin, Changala, P. Bryan, Loomis, Ryan A., Burkhardt, Andrew M., Xue, Ci, Cordiner, Martin A., Charnley, Steven B., McCarthy, Michael C., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
Using radio observations with the Green Bank Telescope, evidence has now been found for a second five-membered ring in the dense cloud Taurus Molecular Cloud-1 (TMC-1). Based on additional observations of an ongoing, large-scale, high-sensitivity spectral line survey (GOTHAM) at centimeter wavelengths toward this source, we have used a combination of spectral stacking, Markov chain Monte Carlo (MCMC), and matched filtering techniques to detect 2-cyanocyclopentadiene, a low-lying isomer of 1-cyanocyclopentadiene, which was recently discovered there by the same methods. The new observational data also yields a considerably improved detection significance for the more stable isomer and evidence for several individual transitions between 23 - 32 GHz. Through our MCMC analysis, we derive total column densities of $8.3\times10^{11}$ and $1.9\times10^{11}$ cm$^{-2}$ for 1- and 2-cyanocyclopentadiene respectively, corresponding to a ratio of 4.4(6) favoring the former. The derived abundance ratios point towards a common formation pathway - most likely being cyanation of cyclopentadiene by analogy to benzonitrile., Comment: 6 pages, 3 figures and 1 table in the main text. 2 tables and 2 figures in the Appendix. Accepted for publication in The Astrophysical Journal Letters. Supplementary data available in the DataVerse entry provided in text
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- 2021
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18. A rotational and vibrational investigation of phenylpropiolonitrile (C$_6$H$_5$C$_3$N)
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Buchanan, Zachary, Lee, Kin Long Kelvin, Chitarra, Olivia, McCarthy, Michael C., Pirali, Olivier, and Martin-Drumel, Marie-Aline
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Astrophysics - Astrophysics of Galaxies ,Physics - Chemical Physics - Abstract
The evidence for benzonitrile (C$_6$H$_5$CN}) in the starless cloud core TMC-1 makes high-resolution studies of other aromatic nitriles and their ring-chain derivatives especially timely. One such species is phenylpropiolonitrile (3-phenyl-2-propynenitrile, C$_6$H$_5$C$_3$N), whose spectroscopic characterization is reported here for the first time. The low resolution (0.5 cm$^{-1}$) vibrational spectrum of C$_6$H$_5$C$_3$N} has been recorded at far- and mid-infrared wavelengths (50 - 3500 cm$^{-1}$) using a Fourier Transform interferometer, allowing for the assignment of band centers of 14 fundamental vibrational bands. The pure rotational spectrum of the species has been investigated using a chirped-pulse Fourier transform microwave (FTMW) spectrometer (6 - 18 GHz), a cavity enhanced FTMW instrument (6 - 20 GHz), and a millimeter-wave one (75 - 100 GHz, 140 - 214 GHz). Through the assignment of more than 6200 lines, accurate ground state spectroscopic constants (rotational, centrifugal distortion up to octics, and nuclear quadrupole hyperfine constants) have been derived from our measurements, with a plausible prediction of the weaker bands through calculations. Interstellar searches for this highly polar species can now be undertaken with confidence since the astronomically most interesting radio lines have either been measured or can be calculated to very high accuracy below 300 GHz., Comment: 7 figures, 4 tables. Accepted for publication in J. Mol. Spec
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- 2021
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19. Discovery of Interstellar trans-cyanovinylacetylene (HCCCH=CHCN) and vinylcyanoacetylene (H$_2$C=CHC$_3$N) in GOTHAM Observations of TMC-1
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Lee, Kin Long Kelvin, Loomis, Ryan A., Burkhardt, Andrew M., Cooke, Ilsa R., Xue, Ci, Siebert, Mark A., Shingledecker, Christopher N., Remijan, Anthony, Charnley, Steven B., McCarthy, Michael C., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
We report the discovery of two unsaturated organic species, trans-(E)-cyanovinylacetylene and vinylcyanoacetylene, using the second data release of the GOTHAM deep survey towards TMC-1 with the 100 m Green Bank Telescope. For both detections, we performed velocity stacking and matched filter analyses using Markov chain Monte Carlo simulations, and for trans-(E)-cyanovinylacetylene, three rotational lines were observed at low signal-to-noise (${\sim}$3$\sigma$). From this analysis, we derive column densities of $2\times10^{11}$ and $3\times10^{11}$ cm$^{-2}$ for vinylcyanoacetylene and trans-(E)-cyanovinylacetylene, respectively, and an upper limit of $<2\times10^{11}$ cm$^{-2}$ for trans-(Z)-cyanovinylacetylene. Comparisons with G3//B3LYP semi-empirical thermochemical calculations indicate abundances of the [H$_3$C$_5$N}] isomers are not consistent with their thermodynamic stability, and instead their abundances are mainly driven by dynamics. We provide discussion into how these species may be formed in TMC-1, with reference to related species like vinyl cyanide (CH$_2$=CHCN). As part of this discussion, we performed the same analysis for ethyl cyanide (CH$_3$CH$_2$CN), the hydrogenation product of CH$_2$=CHCN. This analysis provides evidence -- at 4.17$\sigma$ significance -- an upper limit to the column density of $<4\times10^{11}$ cm$^{-2}$; an order of magnitude lower than previous upper limits towards this source., Comment: Four figures, two tables. Five supplementary figures and four supplementary tables. Published in The Astrophysical Journal Letters
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- 2021
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20. Interstellar Detection of the Highly Polar Five-Membered Ring Cyanocyclopentadiene
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McCarthy, Michael C., Lee, Kin Long Kelvin, Loomis, Ryan A., Burkhardt, Andrew M., Shingledecker, Christopher N., Charnley, Steven B., Cordiner, Martin A., Herbst, Eric, Kalenskii, Sergei, Willis, Eric R., Xue, Ci, Remijan, Anthony J., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
Much like six-membered rings, five-membered rings are ubiquitous in organic chemistry, frequently serving as the building blocks for larger molecules, including many of biochemical importance. From a combination of laboratory rotational spectroscopy and a sensitive spectral line survey in the radio band toward the starless cloud core TMC-1, we report the astronomical detection of 1-cyano-1,3-cyclopentadiene, $c$-C$_5$H$_5$CN}, a highly polar, cyano derivative of cyclopentadiene, $c$-C$_5$H$_6$. The derived abundance of $c$-C$_5$H$_5$CN} is far greater than predicted from astrochemical models which well reproduce the abundance of many carbon chains. This finding implies either an important production mechanism or a large reservoir of aromatic material may need to be considered. The apparent absence of its closely-related isomer, 2-cyano-1,3-cyclopentadiene, may arise from its lower stability or be indicative of a more selective pathway for formation of the 1-cyano isomer, perhaps one starting from acyclic precursors. The absence of N-heterocycles such as pyrrole and pyridine is discussed in light of the astronomical finding., Comment: Accepted for publication in Nature Astronomy. 36 pages comprising five figures, two tables, five supplementary tables, and six supplementary figures
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- 2020
21. Ubiquitous Aromatic Carbon Chemistry at the Earliest Stages of Star Formation
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Burkhardt, Andrew M., Loomis, Ryan A., Shingledecker, Christopher N., Lee, Kin Long Kelvin, Remijan, Anthony J., McCarthy, Michael C., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
Benzonitrile ($c$-C$_6$H$_5$CN), a polar proxy for benzene ($c$-C$_6$H$_6$}), has the potential to serve as a highly convenient radio probe for aromatic chemistry, provided this ring can be found in other astronomical sources beyond the molecule-rich prestellar cloud TMC-1 where it was first reported by McGuire et al. in 2018. Here we present radio astronomical evidence of benzonitrile in four additional pre-stellar, and possibly protostellar, sources: Serpens 1A, Serpens 1B, Serpens 2, and MC27/L1521F. These detections establish benzonitrile is not unique to TMC-1; rather aromatic chemistry appears to be widespread throughout the earliest stages of star formation, likely persisting at least to the initial formation of a protostar. The abundance of benzonitrile far exceeds predictions from models which well reproduce the abundances of carbon chains, such as HC$_7$N, a cyanpolyyne with the same heavy atoms, indicating the chemistry responsible for planar carbon structures (as opposed to linear ones) in primordial sources is favorable but not well understood. The abundance of benzonitrile relative to carbon-chain molecules displays sizable variations between sources within the Taurus and Serpens clouds, implying the importance of physical conditions and initial elemental reservoirs of the clouds themselves., Comment: To Appear in Nature Astronomy, 53 Pages, 15 Figures, 12 Tables
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- 2020
22. An Investigation of Spectral Line Stacking Techniques and Application to the Detection of HC$_{11}$N
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Loomis, Ryan A., Burkhardt, Andrew M., Shingledecker, Christopher N., Charnley, Steven B., Cordiner, Martin A., Herbst, Eric, Kalenskii, Sergei, Lee, Kin Long Kelvin, Willis, Eric R., Xue, Ci, Remijan, Anthony J., McCarthy, Michael C., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
As the inventory of interstellar molecules continues to grow, the gulf between small species, whose individual rotational lines can be observed with radio telescopes, and large ones, such as polycyclic aromatic hydrocarbons (PAHs) best studied in bulk via infrared and optical observations, is slowly being bridged. Understanding the connection between these two molecular reservoirs is critical to understanding the interstellar carbon cycle, but will require pushing the boundaries of how far we can probe molecular complexity while still retaining observational specificity. Toward this end, we present a method for detecting and characterizing new molecular species in single-dish observations toward sources with sparse line spectra. We have applied this method to data from the ongoing GOTHAM (GBT Observations of TMC-1: Hunting Aromatic Molecules) Green Bank Telescope (GBT) large program, discovering six new interstellar species. In this paper we highlight the detection of HC$_{11}$N, the largest cyanopolyyne in the interstellar medium., Comment: 42 pages, 36 figures, 9 tables, to appear in Nature Astronomy
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- 2020
23. Early Science from GOTHAM: Project Overview, Methods, and the Detection of Interstellar Propargyl Cyanide (HCCCH$_2$CN) in TMC-1
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McGuire, Brett A., Burkhardt, Andrew M., Loomis, Ryan A., Shingledecker, Christopher N., Lee, Kin Long Kelvin, Charnley, Steven B., Cordiner, Martin A., Herbst, Eric, Kalenskii, Sergei, Momjian, Emmanuel, Willis, Eric R., Xue, Ci, Remijan, Anthony J., and McCarthy, Michael C.
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Astrophysics - Astrophysics of Galaxies - Abstract
We present an overview of the GOTHAM (GBT Observations of TMC-1: Hunting Aromatic Molecules) Large Program on the Green Bank Telescope. This and a related program were launched to explore the depth and breadth of aromatic chemistry in the interstellar medium at the earliest stages of star formation, following our earlier detection of benzonitrile ($c$-C$_6$H$_5$CN) in TMC-1. In this work, details of the observations, use of archival data, and data reduction strategies are provided. Using these observations, the interstellar detection of propargyl cyanide (HCCCH$_2$CN) is described, as well as the accompanying laboratory spectroscopy. We discuss these results, and the survey project as a whole, in the context of investigating a previously unexplored reservoir of complex, gas-phase molecules in pre-stellar sources. A series of companion papers describe other new astronomical detections and analyses., Comment: Accepted in the Astrophysical Journal Letters
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- 2020
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24. Detection of Interstellar HC$_4$NC and an Investigation of Isocyanopolyyne Chemistry under TMC-1 Conditions
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Xue, Ci, Willis, Eric R., Loomis, Ryan A., Lee, Kin Long Kelvin, Burkhardt, Andrew M., Shingledecker, Christopher N., Charnley, Steven B., Cordiner, Martin A., Kalenskii, Sergei, McCarthy, Michael C., Herbst, Eric, Remijan, Anthony J., and McGuire, Brett A.
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Astrophysics - Astrophysics of Galaxies - Abstract
We report an astronomical detection of HC$_4$NC for the first time in the interstellar medium with the Green Bank Telescope toward the TMC-1 molecular cloud with a minimum significance of $10.5 \sigma$. The total column density and excitation temperature of HC$_4$NC are determined to be $3.29^{+8.60}_{-1.20}\times 10^{11}$ cm$^{-2}$ and $6.7^{+0.3}_{-0.3}$ K, respectively, using the MCMC analysis. In addition to HC$_4$NC, HCCNC is distinctly detected whereas no clear detection of HC$_6$NC is made. We propose that the dissociative recombination of the protonated cyanopolyyne, HC$_5$NH$^+$, and the protonated isocyanopolyyne, HC$_4$NCH$^+$, are the main formation mechanisms for HC$_4$NC while its destruction is dominated by reactions with simple ions and atomic carbon. With the proposed chemical networks, the observed abundances of HC$_4$NC and HCCNC are reproduced satisfactorily., Comment: Accepted in the Astrophysical Journal Letters
- Published
- 2020
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25. Molecule Identification with Rotational Spectroscopy and Probabilistic Deep Learning
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McCarthy, Michael C. and Lee, Kin Long Kelvin
- Subjects
Physics - Chemical Physics - Abstract
A proof-of-concept framework for identifying molecules of unknown elemental composition and structure using experimental rotational data and probabilistic deep learning is presented. Using a minimal set of input data determined experimentally, we describe four neural network architectures that yield information to assist in the identification of an unknown molecule. The first architecture translates spectroscopic parameters into Coulomb matrix eigenspectra, as a method of recovering chemical and structural information encoded in the rotational spectrum. The eigenspectrum is subsequently used by three deep learning networks to constrain the range of stoichiometries, generate SMILES strings, and predict the most likely functional groups present in the molecule. In each model, we utilize dropout layers as an approximation to Bayesian sampling, which subsequently generates probabilistic predictions from otherwise deterministic models. These models are trained on a modestly sized theoretical dataset comprising ${\sim}$83,000 unique organic molecules (between 18 and 180 amu) optimized at the $\omega$B97X-D/6-31+G(d) level of theory where the theoretical uncertainty of the spectroscopic constants are well understood and used to further augment training. Since chemical and structural properties depend highly on molecular composition, we divided the dataset into four groups corresponding to pure hydrocarbons, oxygen-bearing, nitrogen-bearing, and both oxygen- and nitrogen-bearing species, training each type of network with one of these categories thus creating "experts" within each domain of molecules. We demonstrate how these models can then be used for practical inference on four molecules, and discuss both the strengths and shortcomings of our approach, and the future directions these architectures can take., Comment: 48 pages, 13 figures, 6 tables. Accepted for publication in JPCA Special Issue: Machine Learning in Physical Chemistry. Code for models available at https://github.com/laserkelvin/rotconml. Corrected details about the optimizer and weight decay
- Published
- 2020
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26. Searches for Interstellar HCCSH and H$_2$CCS
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McGuire, Brett A., Shingledecker, Christopher N., Willis, Eric R., Lee, Kin Long Kelvin, Martin-Drumel, Marie-Aline, Blake, Geoffrey A., Brogan, Crystal L., Burkhardt, Andrew M., Caselli, Paola, Chuang, Ko-Ju, El-Abd, Samer, Hunter, Todd R., Ioppolo, Sergio, Linnartz, Harold, Remijan, Anthony J., Xue, Ci, and McCarthy, Michael C.
- Subjects
Astrophysics - Astrophysics of Galaxies - Abstract
A long standing problem in astrochemistry is the inability of many current models to account for missing sulfur content. Many relatively simple species that may be good candidates to sequester sulfur have not been measured experimentally at the high spectral resolution necessary to enable radioastronomical identification. On the basis of new laboratory data, we report searches for the rotational lines in the microwave, millimeter, and sub-millimeter regions of the sulfur-containing hydrocarbon HCCSH. This simple species would appear to be a promising candidate for detection in space owing to the large dipole moment along its $b$-inertial axis, and because the bimolecular reaction between two highly abundant astronomical fragments (CCH and SH radicals) may be rapid. An inspection of multiple line surveys from the centimeter to the far-infrared toward a range of sources from dark clouds to high-mass star-forming regions, however, resulted in non-detections. An analogous search for the lowest-energy isomer, H$_2$CCS, is presented for comparison, and also resulted in non-detections. Typical upper limits on the abundance of both species relative to hydrogen are $10^{-9}$-$10^{-10}$. We thus conclude that neither isomer is a major reservoir of interstellar sulfur in the range of environments studied. Both species may still be viable candidates for detection in other environments or at higher frequencies, providing laboratory frequencies are available., Comment: Accepted in the Astrophysical Journal
- Published
- 2019
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27. High Sensitivity Microwave Spectroscopy in a Cryogenic Buffer Gas Cell
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Porterfield, Jessica P., Satterthwaite, Lincoln, Eibenberger, Sandra, Patterson, David, and McCarthy, Michael C.
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Physics - Instrumentation and Detectors ,Physics - Chemical Physics - Abstract
We describe an instrument which can be used to analyze complex chemical mixtures at high resolution and high sensitivity. Molecules are collisionally cooled with helium gas at cryogenic temperatures (~ 4-7 K), and subsequently detected using chirped pulse microwave spectroscopy. Here we demonstrate three significant improvements to the apparatus relative to an earlier version: (1) extension of its operating range by more than a factor of two, from 12-18 GHz to 12-26 GHz, which allows a much wider range of species to be characterized; (2) improved detection sensitivity owing to use of cryogenically-cooled low-noise amplifiers and protection switches, and (3) a versatile method of sample input that enables analysis of solids, liquids, gases, and solutions, without the need for chemical separation (as demonstrated with a 12-16 GHz spectrum of lemon oil). This instrument can record broadband microwave spectra at comparable sensitivity to high Q cavity spectrometers which use pulsed supersonic jets, but up to 3000 times faster with a modest increase in sample consumption rate., Comment: 12 pages, 6 figures
- Published
- 2019
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28. Submillimeter spectroscopy and astronomical searches of vinyl mercaptan, C$_2$H$_3$SH
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Martin-Drumel, Marie-Aline, Lee, Kin Long Kelvin, Belloche, Arnaud, Zingsheim, Oliver, Thorwirth, Sven, Mueller, Holger S. P., Lewen, Frank, Garrod, Robin T., Menten, Karl M., McCarthy, Michael C., and Schlemmer, Stephan
- Subjects
Astrophysics - Astrophysics of Galaxies - Abstract
We have extended the pure rotational investigation of the two isomers syn and anti vinyl mercaptan to the millimeter domain using a frequency-multiplication spectrometer. The species were produced by a radiofrequency discharge in 1,2-ethanedithiol. Additional transitions have been re-measured in the centimeter band using Fourier-transform microwave spectroscopy to better determine rest frequencies of transitions with low-$J$ and low-$K_a$ values. Experimental investigations were supported by quantum chemical calculations on the energetics of both the [C$_2$,H$_4$,S] and [C$_2$,H$_4$,O] isomeric families. Interstellar searches for both syn and anti vinyl mercaptan as well as vinyl alcohol were performed in the EMoCA (Exploring Molecular Complexity with ALMA) spectral line survey carried out toward Sagittarius (Sgr) B2(N2) with the Atacama Large Millimeter/submillimeter Array (ALMA). Highly accurate experimental frequencies (to better than 100 kHz accuracy) for both syn and anti isomers of vinyl mercaptan have been measured up to 250 GHz; these deviate considerably from predictions based on extrapolation of previous microwave measurements. Reliable frequency predictions of the astronomically most interesting millimeter-wave lines for these two species can now be derived from the best-fit spectroscopic constants. From the energetic investigations, the four lowest singlet isomers of the [C$_2$,H$_4$,S] family are calculated to be nearly isoenergetic, which makes this family a fairly unique test bed for assessing possible reaction pathways. Upper limits for the column density of syn and anti vinyl mercaptan are derived toward the extremely molecule-rich star-forming region Sgr B2(N2) enabling comparison with selected complex organic molecules., Comment: 13 pages, 5 figures, 2 tables, 2 appendices. Accepted for publication in A&A 13th of February, 2019
- Published
- 2019
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29. Rotational spectra of twenty-one vibrational states of [35Cl]-and [37Cl]-chlorobenzene
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Dorman, P. Matisha, Esselman, Brian J., Changala, P. Bryan, McCarthy, Michael C., Woods, R. Claude, and McMahon, Robert J.
- Published
- 2023
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30. Perspectives on Astrophysics Based on Atomic, Molecular, and Optical (AMO) Techniques
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Savin, Daniel Wolf, Babb, James F., Bellan, Paul M., Brogan, Crystal, Cami, Jan, Caselli, Paola, Corrales, Lia, Dominguez, Gerardo, Federman, Steven R., Fontes, Chris J., Freedman, Richard, Gibson, Brad, Golub, Leon, Gorczyca, Thomas W., Hahn, Michael, Hörst, Sarah M., Hudson, Reggie L., Kuhn, Jeffrey, Lawler, James E., Leutenegger, Maurice A., Marler, Joan P., McCarthy, Michael C., McGuire, Brett A., Milam, Stefanie N., Murphy, Nicholas A., Nave, Gillian, Norton, Aimee A., Papol, Anthony, Raymond, John C., Salama, Farid, Sciamma-O'Brien, Ella M., Smith, Randall, Sosolik, Chad, Sousa-Silva, Clara, Stancil, Phillip C., Timmes, Frank, Trimble, Virginia L., and Wargelin, Bradford J.
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Physics - Atomic Physics ,Astrophysics - Instrumentation and Methods for Astrophysics ,Physics - Applied Physics ,Physics - Chemical Physics ,Physics - Computational Physics - Abstract
About two generations ago, a large part of AMO science was dominated by experimental high energy collision studies and perturbative theoretical methods. Since then, AMO science has undergone a transition and is now dominated by quantum, ultracold, and ultrafast studies. But in the process, the field has passed over the complexity that lies between these two extremes. Most of the Universe resides in this intermediate region. We put forward that the next frontier for AMO science is to explore the AMO complexity that describes most of the Cosmos., Comment: White paper submission to the Decadal Assessment and Outlook Report on Atomic, Molecular, and Optical (AMO) Science (AMO 2020)
- Published
- 2018
31. HSCO$^+$ and DSCO$^+$: a multi-technique approach in the laboratory for the spectroscopy of interstellar ions
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Lattanzi, Valerio, Spezzano, Silvia, Laas, Jacob C., Chantzos, Johanna, Bizzocchi, Luca, Lee, Kin Long Kelvin, McCarthy, Michael C., and Caselli, Paola
- Subjects
Astrophysics - Astrophysics of Galaxies ,Physics - Chemical Physics - Abstract
Protonated molecular species have been proven to be abundant in the interstellar gas. This class of molecules is also pivotal for the determination of important physical parameters for the ISM evolution (e.g. gas ionisation fraction) or as tracers of non-polar, hence not directly observable, species. The identification of these molecular species through radioastronomical observations is directly linked to a precise laboratory spectral characterisation. The goal of the present work is to extend the laboratory measurements of the pure rotational spectrum of the ground electronic state of protonated carbonyl sulfide (HSCO$^+$) and its deuterium substituted isotopomer (DSCO$^+$). At the same time, we show how implementing different laboratory techniques allows the determination of different spectroscopical properties of asymmetric-top protonated species. Three different high-resolution experiments were involved to detected for the first time the $b-$type rotational spectrum of HSCO$^+$, and to extend, well into the sub-millimeter region, the $a-$type spectrum of the same molecular species and DSCO$^+$. The electronic ground-state of both ions have been investigated in the 273-405 GHz frequency range, allowing the detection of 60 and 50 new rotational transitions for HSCO$^+$ and DSCO$^+$, respectively. The combination of our new measurements with the three rotational transitions previously observed in the microwave region permits the rest frequencies of the astronomically most relevant transitions to be predicted to better than 100 kHz for both HSCO$^+$ and DSCO$^+$ up to 500 GHz, equivalent to better than 60 m/s in terms of equivalent radial velocity. The present work illustrates the importance of using different laboratory techniques to spectroscopically characterise a protonated species at high frequency, and how a similar approach can be adopted when dealing with reactive species., Comment: 7 pages, 4 figures. Accepted for publication in Astronomy and Astrophysics
- Published
- 2018
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32. A study of the ozonolysis of isoprene in a cryogenic buffer gas cell by high resolution microwave spectroscopy
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Porterfield, Jessica P., Eibenberger, Sandra, Patterson, Dave, and McCarthy, Michael C.
- Subjects
Physics - Chemical Physics - Abstract
We have developed a method to quantify reaction product ratios using high resolution microwave spectroscopy in a cryogenic buffer gas cell. We demonstrate the power of this method with the study of the ozonolysis of isoprene, CH2=C(CH3)-CH=CH2, the most abundant, non-methane hydrocarbon emitted into the atmosphere by vegetation. Isoprene is an asymmetric diene, and reacts with O3 at the 1,2 position to produce methyl vinyl ketone (MVK), formaldehyde, and a pair of carbonyl oxides: [CH3CO-CH=CH2 + CH2=OO] + [CH2=O + CH3COO-CH=CH2]. Alternatively, O3 could attack at the 3,4 position to produce methacrolein (MACR), formaldehyde, and two carbonyl oxides [CH2=C(CH3)-CHO + CH2=OO] + [CH2=O + CH2=C(CH3)-CHOO]. Purified O3 and isoprene were mixed for approximately 10 seconds under dilute (1.5-4% in argon) continuous flow conditions in an alumina tube held at 298 K and 5 Torr. Products exiting the tube were rapidly slowed and cooled within the buffer gas cell by collisions with cryogenic (4-7 K) He. High resolution chirped pulse microwave detection between 12 and 26 GHz was used to achieve highly sensitive (ppb scale), isomer-specific product quantification. We observed a ratio of MACR to MVK of 2.1 +/- 0.4 under 1:1 ozone to isoprene conditions and 2.1 +/- 0.2 under 2:1 ozone to isoprene conditions, a finding which is consistent with previous experimental results. Additionally, we discuss relative quantities of formic acid (HCOOH), an isomer of CH2=OO, and formaldehyde (CH2=O) under varying experimental conditions, and characterize the spectroscopic parameters of the singly-substituted 13C trans-isoprene and 13C anti-periplanar-methacrolein species. This work has the potential to be extended towards a complete branching ratio analysis, as well towards the ability to isolate, identify, and quantify new reactive intermediates in the ozonolysis of alkenes.
- Published
- 2018
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33. Laboratory rotational spectroscopy of the magnesium-carbon chains MgC4H and MgC3N
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Changala, P. Bryan, primary, Genossar-Dan, Nadav, additional, Baraban, Joshua H., additional, and McCarthy, Michael C., additional
- Published
- 2024
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34. Laboratory Rotational Spectra of Silyl Isocyanide
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Lee, Kin Long Kelvin, Gottlieb, Carl A., and McCarthy, Michael C.
- Subjects
Astrophysics - Astrophysics of Galaxies - Abstract
The rotational spectrum of silyl isocyanide (SiH$_3$NC), an isomer of the well studied silyl cyanide (SiH$_3$CN), has been detected in the laboratory in a supersonic molecular beam, and the identification was confirmed by observations of the corresponding rotational transitions in the rare isotopic species SiH$_3$$^{15}$NC and SiH$_3$N$^{13}$C. Spectroscopic constants derived from 19 transitions between $11 - 35$~GHz in the three lowest harmonically related rotational transitions in the $K = 0 ~{\rm{and}}~1$ ladders of the normal isotopic species including the nitrogen nuclear quadrupole hyperfine constant, allow the principal astronomical transitions of SiH$_3$NC to be calculated to an uncertainty of about 4~km~s$^{-1}$ in equivalent radial velocity, or within the FWHM of narrow spectral features in the inner region of IRC+10216 near 200~GHz. The concentration of SiH$_3$NC in our molecular beam is three times less than SiH$_3$CN, or about the same as the corresponding ratio of the isomeric pair SiNC and SiCN produced under similar conditions. Silyl isocyanide is an excellent candidate for astronomical detection, because the spectroscopic and chemical properties are very similar to SiH$_3$CN which was recently identified in the circumstellar envelope of IRC+10216 by \citet{cernicharo_discovery_2017} and of SiNC and SiCN in the same source., Comment: 18 pages, accepted for publication in The Astrophysical Journal on April 25, 2018
- Published
- 2018
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35. Vibrational Satellites of C$_2$S, C$_3$S, and C$_4$S: Microwave Spectral Taxonomy as a Stepping Stone to the Millimeter-Wave Band
- Author
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McGuire, Brett A., Martin-Drumel, Marie-Aline, Lee, Kin Long Kelvin, Stanton, John F., Gottlieb, Carl A., and McCarthy, Michael C.
- Subjects
Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Astrophysics of Galaxies ,Physics - Chemical Physics - Abstract
We present a microwave spectral taxonomy study of several hydrocarbon/CS$_2$ discharge mixtures in which more than 60 distinct chemical species, their more abundant isotopic species, and/or their vibrationally excited states were detected using chirped-pulse and cavity Fourier-transform microwave spectroscopies. Taken together, in excess of 85 unique variants were detected, including several new isotopic species and more than 25 new vibrationally excited states of C$_2$S, C$_3$S, and C$_4$S, which have been assigned on the basis of published vibration-rotation interaction constants for C$_3$S, or newly calculated ones for C$_2$S and C$_4$S. On the basis of these precise, low-frequency measurements, several vibrationally exited states of C$_2$S and C$_3$S were subsequently identified in archival millimeter-wave data in the 253--280 GHz frequency range, ultimately providing highly accurate catalogs for astronomical searches. As part of this work, formation pathways of the two smaller carbon-sulfur chains were investigated using $^{13}$C isotopic spectroscopy, as was their vibrational excitation. The present study illustrates the utility of microwave spectral taxonomy as a tool for complex mixture analysis, and as a powerful and convenient `stepping stone' to higher frequency measurements in the millimeter and submillimeter bands., Comment: Accepted in PCCP
- Published
- 2018
- Full Text
- View/download PDF
36. Detection of the Aromatic Molecule Benzonitrile ($c$-C$_6$H$_5$CN) in the Interstellar Medium
- Author
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McGuire, Brett A., Burkhardt, Andrew M., Kalenskii, Sergei, Shingledecker, Christopher N., Remijan, Anthony J., Herbst, Eric, and McCarthy, Michael C.
- Subjects
Astrophysics - Astrophysics of Galaxies - Abstract
Polycyclic aromatic hydrocarbons and polycyclic aromatic nitrogen heterocycles are thought to be widespread throughout the Universe, because these classes of molecules are probably responsible for the unidentified infrared bands, a set of emission features seen in numerous Galactic and extragalactic sources. Despite their expected ubiquity, astronomical identification of specific aromatic molecules has proven elusive. We present the discovery of benzonitrile ($c$-C$_6$H$_5$CN), one of the simplest nitrogen-bearing aromatic molecules, in the interstellar medium. We observed hyperfine-resolved transitions of benzonitrile in emission from the molecular cloud TMC-1. Simple aromatic molecules such as benzonitrile may be precursors for polycyclic aromatic hydrocarbon formation, providing a chemical link to the carriers of the unidentified infrared bands.
- Published
- 2018
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37. Detection of HC$_5$N and HC$_7$N Isotopologues in TMC-1 with the Green Bank Telescope
- Author
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Burkhardt, Andrew M., Herbst, Eric, Kalenskii, Sergei V., McCarthy, Michael C., Remijan, Anthony J., and McGuire, Brett A.
- Subjects
Astrophysics - Astrophysics of Galaxies - Abstract
We report the first interstellar detection of DC$_7$N and six $^{13}$C-bearing isotopologues of HC$_7$N toward the dark cloud TMC-1 through observations with the Green Bank Telescope, and confirm the recent detection of HC$_5$$^{15}$N. For the average of the $^{13}$C isotopomers, DC$_7$N, and HC$_5$$^{15}$N, we derive column densities of 1.9(2)$\times$10$^{11}$, 2.5(9)$\times$10$^{11}$, and 1.5(4)$\times$10$^{11}$ cm$^{-2}$, respectively. The resulting isotopic ratios are consistent with previous values derived from similar species in the source, and we discuss the implications for the formation chemistry of the observed cyanopolyynes. Within our uncertainties, no significant $^{13}$C isotopomer variation is found for HC$_7$N, limiting the significance CN could have in its production. The results further show that, for all observed isotopes, HC$_5$N may be isotopically depleted relative to HC$_3$N and HC$_7$N, suggesting that reactions starting from smaller cyanopolyynes may not be efficient to form HC$_{n}$N. This leads to the conclusion that the dominant production route may be the reaction between hydrocarbon ions and nitrogen atoms., Comment: 8 pages, 2 figures, 3 tables, accepted to MNRAS
- Published
- 2017
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38. Infrared action spectroscopy of fundamental nitrilium ions: Protonated vinyl- and ethyl cyanide
- Author
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Thorwirth, Sven, Asvany, Oskar, Harding, Michael E., Jusko, Pavol, McCarthy, Michael C., Brünken, Sandra, and Schlemmer, Stephan
- Published
- 2022
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39. Rotational spectrum of anti- and gauche-4-cyano-1-butyne (C5H5N) – An open-chain isomer of pyridine
- Author
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Dorman, P. Matisha, Esselman, Brian J., Changala, P. Bryan, Kougias, Samuel M., McCarthy, Michael C., Woods, R. Claude, and McMahon, Robert J.
- Published
- 2022
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- View/download PDF
40. Detection of Interstellar HC$_5$O in TMC-1 with the Green Bank Telescope
- Author
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McGuire, Brett A., Burkhardt, Andrew M., Shingledecker, Christopher N., Kalenskii, Sergei V., Herbst, Eric, Remijan, Anthony J., and McCarthy, Michael C.
- Subjects
Astrophysics - Astrophysics of Galaxies - Abstract
We report the detection of the carbon-chain radical HC$_5$O for the first time in the interstellar medium toward the dark cloud TMC-1 using the 100 m Green Bank Telescope. We observe four hyperfine components of this radical in the $J = 17/2 \rightarrow 15/2$ rotational transition that originates from the $^2\Pi_{1/2}$ fine structure level of its ground state, and calculate an abundance of $n/n_{H_2}$ = $1.7\times 10^{-10}$, assuming an excitation temperature of $T_{ex} = 7$~K. No indication of HC$_3$O, HC$_4$O, HC$_6$O, is found in these or archival observations of the source, while we report tentative evidence for HC$_7$O. We compare calculated upper limits, and the abundance of HC$_5$O to predictions based on (1) the abundance trend of the analogous HC$_n$N family in TMC-1 and (2) a gas-grain chemical model. We find that the gas-grain chemical model well reproduces the observed abundance of HC$_5$O, as well as the upper limits of HC$_3$O, HC$_6$O, and HC$_7$O, but HC$_4$O is over produced. The prospects for astronomical detection of both shorter and longer HC$_n$O chains are discussed., Comment: Accepted in The Astrophysical Journal Letters
- Published
- 2017
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41. Direct Probes of π-Delocalization in Prototypical Resonance-Stabilized Radicals: Hyperfine-Resolved Microwave Spectroscopy of Isotopic Propargyl and Cyanomethyl
- Author
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Changala, P. Bryan, primary, Franke, Peter R., additional, Stanton, John F., additional, Ellison, G. Barney, additional, and McCarthy, Michael C., additional
- Published
- 2024
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42. Molecular Polymorphism: Microwave Spectra, Equilibrium Structures, and an Astronomical Investigation of the HNCS Isomeric Family
- Author
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McGuire, Brett A., Martin-Drumel, Marie-Aline, Thorwirth, Sven, Brünken, Sandra, Lattanzi, Valerio, Neill, Justin L., Spezzano, Silvia, Yu, Zhenhong, Zaleski, Daniel P., Remijan, Anthony J., Pate, Brooks H., and McCarthy, Michael C.
- Subjects
Astrophysics - Astrophysics of Galaxies ,Physics - Chemical Physics - Abstract
The rotational spectra of thioisocyanic acid (HNCS), and its three energetic isomers (HSCN, HCNS, and HSNC) have been observed at high spectral resolution by a combination of chirped-pulse and Fabry-P\'{e}rot Fourier-transform microwave spectroscopy between 6 and 40~GHz in a pulsed-jet discharge expansion. Two isomers, thiofulminic acid (HCNS) and isothiofulminic acid (HSNC), calculated here to be 35-37~kcal/mol less stable than the ground state isomer HNCS, have been detected for the first time. Precise rotational, centrifugal distortion, and nitrogen hyperfine coupling constants have been determined for the normal and rare isotopic species of both molecules; all are in good agreement with theoretical predictions obtained at the coupled cluster level of theory. On the basis of isotopic spectroscopy, precise molecular structures have been derived for all four isomers by correcting experimental rotational constants for the effects of rotation-vibration calculated theoretically. Formation and isomerization pathways have also been investigated; the high abundance of HSCN relative to ground state HNCS, and the detection of strong lines of SH using CH$_3$CN and H$_2$S, suggest that HSCN is preferentially produced by the radical-radical reaction HS + CN. A radio astronomical search for HSCN and its isomers has been undertaken toward the high-mass star-forming region Sgr B2(N) in the Galactic Center with the 100 m Green Bank Telescope. While we find clear evidence for HSCN, only a tentative detection of HNCS is proposed, and there is no indication of HCNS or HSNC at the same rms noise level. HSCN, and tentatively HNCS, displays clear deviations from a single-excitation temperature model, suggesting weak masing may be occurring in some transitions in this source., Comment: Accepted in Physical Chemistry Chemical Physics
- Published
- 2016
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43. A high speed fitting program for rotational spectroscopy
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Carroll, P. Brandon, Lee, Kin Long Kelvin, and McCarthy, Michael C.
- Published
- 2021
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44. SOLEIL and ALMA views on prototypical organic nitriles: C2H5CN
- Author
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Endres, Christian P., Martin-Drumel, Marie-Aline, Zingsheim, Oliver, Bonah, Luis, Pirali, Olivier, Zhang (张天惟), Tianwei, Sánchez-Monge, Álvaro, Möller, Thomas, Wehres, Nadine, Schilke, Peter, McCarthy, Michael C., Schlemmer, Stephan, Caselli, Paola, and Thorwirth, Sven
- Published
- 2021
- Full Text
- View/download PDF
45. Spontaneous and Selective Formation of HSNO, a Crucial Intermediate Linking H2S and Nitroso Chemistries
- Author
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Nava, Matthew, Martin-Drumel, Marie-Aline, Lopez, Christopher A, Crabtree, Kyle N, Womack, Caroline C, Nguyen, Thanh L, Thorwirth, Sven, Cummins, Christopher C, Stanton, John F, and McCarthy, Michael C
- Subjects
Inorganic Chemistry ,Chemical Sciences ,General Chemistry ,Chemical sciences ,Engineering - Abstract
Thionitrous acid (HSNO), a potential key intermediate in biological signaling pathways, has been proposed to link NO and H2S biochemistries, but its existence and stability in vivo remain controversial. We establish that HSNO is spontaneously formed in high concentration when NO and H2S gases are mixed at room temperature in the presence of metallic surfaces. Our measurements reveal that HSNO is formed by the reaction H2S + N2O3 → HSNO + HNO2, where N2O3 is a product of NO disproportionation. These studies also suggest that further reaction of HSNO with H2S may form HNO and HSSH. The length of the S-N bond has been derived to high precision and is found to be unusually long: 1.84 Å, the longest S-N bond reported to date for an R-SNO compound. The present structural and, particularly, reactivity investigations of this elusive molecule provide a firm foundation to better understand its potential physiological chemistry and propensity to undergo S-N bond cleavage in vivo.
- Published
- 2016
46. Afterword
- Author
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McCarthy, Michael C., primary
- Published
- 2021
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47. Afterword: The Good Faith of Avery Cardinal Dulles, S.J.
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McCarthy, Michael C., primary
- Published
- 2021
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48. Modeled and measured near-road PM2.5 concentrations: Indianapolis and Providence cases
- Author
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Craig, Kenneth J., Baringer, Lynn M., Chang, Shih-Ying, McCarthy, Michael C., Bai, Song, Seagram, Annie F., Ravi, Vikram, Landsberg, Karin, and Eisinger, Douglas S.
- Published
- 2020
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49. Influence of roadway emissions on near-road PM2.5: Monitoring data analysis and implications
- Author
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Mukherjee, Anondo, McCarthy, Michael C., Brown, Steven G., Huang, ShihMing, Landsberg, Karin, and Eisinger, Douglas S.
- Published
- 2020
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50. Ubiquitous aromatic carbon chemistry at the earliest stages of star formation
- Author
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Burkhardt, Andrew M., Loomis, Ryan A., Shingledecker, Christopher N., Lee, Kin Long Kelvin, Remijan, Anthony J., McCarthy, Michael C., and McGuire, Brett A.
- Published
- 2021
- Full Text
- View/download PDF
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