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We are facing interwoven global threats to public health and ecosystem function that reveal the intrinsic connections between human and wildlife health. These challenges are especially pressing in cities, where social-ecological interactions are pronounced. The One Health concept provides an organizing framework that promotes the health and well-being of urban communities and ecosystems. However, for One Health to be successful, it must incorporate societal inequities in environmental disamenities, exposures, and policy. Such inequities affect all One Health interfaces, including the distribution of ecosystem services and disservices, the nature and frequency ofhuman–wildlife interactions, and legacies of land use. Here, we review the current literature on One Health perspectives, pinpoint areas in which to incorporate an environmental justice lens, and close with recommendations for future work. Intensifying social, political, and environmental unrest underscores a dire need for One Health solutions informed by environmental justice principles to help build healthier, more resilient cities.

Reduced human activity to mitigate the spread of the COVID-19 pandemic was accompanied by reports of unusual wildlife sightings in highly developed areas. Such experiences with urban nature may have helped residents cope with the stress of the pandemic and increased public interest in urban wildlife; however, this may depend on the species residents encountered. In this study, we surveyed Chicago, Illinois, USA residents during a stay-at-home order to understand if residents in more affluent or greener neighborhoods saw more wildlife species. We also evaluated whether encounters with pest and non-pest species were associated with residents' values about wildlife. Of 593 responses included in our analyses, respondents in higher-income and greener neighborhoods were more likely to perceive increased wildlife sightings and respondents in higher-income areas reported observing a higher number common birds and mammals. Support for seeing wildlife in residential areas was associated with seeing passerine birds and not seeing rats during the stay-at-home order. Our results suggest that perceived increases in wildlife sightings were common during a stay-at-home order, especially for affluent residents, and that residents' perceptions depended on the species encountered. Understanding how changes in human behavior modifies human-wildlife interactions can help mitigate human-wildlife conflict and foster positive engagement with local wildlife.The online version contains supplementary material available at 10.1007/s11252-022-01284-x.

In cities throughout North America, sightings of coyotes (Canis latrans) have become common. Reports of human-coyote conflict are also rising, as is the public demand for proactive management to prevent negative human-coyote interactions. Effective and proactive management can be informed by the direct observations of community members, who can report their interactions with coyotes and describe the location, time, and context that led to their interactions. To assess the predictors of human-coyote conflict, we used a web-based reporting system to collect 9,134 community-supplied reports of coyotes in Edmonton, Canada, between January 2012 and December 2021. We used a standardized ordinal ranking system to score each report on two indicators of human-coyote conflict: coyote boldness, based on the reported coyote behaviour, and human perceptions about coyotes, determined from the emotions expressed by reporters. We assigned greater conflict scores to behaviours where coyotes followed, approached, charged or contacted pets or people, and to perceptions where reporters expressed fear, worry, concern, discomfort or alarm. Using ordered logistic regression and chi-square tests, we compared conflict scores for each response variable to spatial, temporal and contextual covariates. Our analysis showed that coyotes were bolder in less developed open areas and during the pup rearing season, but human perceptions were most negative in residential areas and during the dispersal season. Reports that mentioned dogs or cats were more likely to describe bolder coyote behaviour, and those that mentioned pets or children had more negative perceptions about coyotes. Coyote boldness and human perceptions both indicated rising human-coyote conflict in Edmonton over the 10 years of reporting.

Food provisioning can change wildlife pathogen dynamics by altering host susceptibility via nutrition and/or through shifts in foraging behavior and space use. We used the American white ibis (Eudocimus albus), a wading bird increasingly observed in urban parks, as a model to study synergistic relationships between food provisioning and infection risk across an urban gradient in South Florida. We tested whether Salmonella prevalence was associated with changes in ibis diet (stable isotope analysis), space use (site fidelity via GPS tracking), and local density (flock size). We compared the relative importance of these mechanisms by ranking candidate models using logistic regression. We detected Salmonella in 27% of white ibises (n = 233) sampled at 15 sites. Ibises with diets higher in anthropogenic food exhibited higher site fidelity. Salmonella prevalence was higher at sites where ibises exhibited greater site fidelity and Salmonella was more prevalent in soil and water. Overlap in Salmonella serotypes between ibises and soil or water also was more likely at sites where ibises exhibited higher site fidelity. Our results suggest that repeated use of foraging areas may increase Salmonella exposure for birds if foraging areas are contaminated from animal feces, human waste, or other bacterial sources. Limiting wildlife feeding in parks—perhaps best achieved through understanding the motivations for feeding, education, and enforcement—may reduce health risks for wildlife and the public.

Urban biodiversity provides critical ecosystem services and is a key component to environmentally and socially sustainable cities. However, biodiversity varies greatly within and among cities, leading to human communities with changing and unequal experiences with nature. The "luxury effect," a hypothesis that predicts a positive correlation between wealth, typically measured by per capita income, and species richness may be one indication of these inequities. While the luxury effect is well studied for some taxa, it has rarely been investigated for mammals, which provide unique ecosystem services (e.g., biological pest control) and exhibit significant potential for negative human-wildlife interactions (e.g., nuisances or conflicts). We analyzed a large dataset of mammal detections across 20 North American cities to test whether the luxury effect is consistent for medium- to large-sized terrestrial mammals across diverse urban contexts. Overall, support for the luxury effect, as indicated by per capita income, was inconsistent; we found evidence of a luxury effect in approximately half of our study cities. Species richness was, however, highly and negatively correlated with urban intensity in most cities. We thus suggest that economic factors play an important role in shaping urban mammal communities for some cities and species, but that the strongest driver of urban mammal diversity is urban intensity. To better understand the complexity of urban ecosystems, ecologists and social scientists must consider the social and political factors that drive inequitable human experiences with nature in cities.

To mitigate human-wildlife conflict it is imperative to know where and when conflict occurs. However, standard methods used to predict the occurrence of human-wildlife conflict often fail to recognize how a species distribution likely limits where and when conflict may happen. As such, methods that predict human-wildlife conflict could be improved if they could identify where conflict will occur relative to species' underlying distribution. To this end, we used an integrated species distribution model that combined presence-only wildlife complaints with data from a systematic camera trapping survey throughout Chicago, Illinois. This model draws upon both data sources to estimate a latent distribution of species; in addition, the model can estimate where conflict is most likely to occur within that distribution. We modeled the occupancy and conflict potential of coyote (Canis latrans), Virginia opossum (Didelphis virginiana), and raccoon (Procyon lotor) as a function of urban intensity, per capita income, and home vacancy rates throughout Chicago. Overall, the distribution of each species constrained the spatiotemporal patterns of conflict throughout the city of Chicago. Within each species distribution, we found that human-wildlife conflict was most likely to occur where humans and wildlife habitat overlap (e.g., featuring higher-than-average canopy cover and housing density). Furthermore, human-wildlife conflict was most likely to occur in high-income neighborhoods for Virginia opossum and raccoon, despite the fact that those two species have higher occupancy in low-income neighborhoods. As such, knowing where species are distributed can inform guidelines on where wildlife management should be focused, especially if it overlaps with human habitats. Finally, because this integrated model can incorporate data that have already been collected by wildlife managers or city officials, this approach could be used to develop stronger collaborations with wildlife management agencies and conduct applied research that will inform landscape-scale wildlife management.

Prior studies (2006-2016) in birds of prey admitted to a wildlife clinic in Massachusetts, USA, revealed widespread exposure to second-generation anticoagulant rodenticides (SGARs) among red-tailed hawks (Buteo jamaicensis, RTHAs). Continued monitoring of species for which historic data are available can reveal trends in exposure that aid in evaluating the effectiveness of risk-mitigation measures. While the majority of exposure-monitoring studies utilize liver tissue collected postmortem, antemortem modalities, such as serum analysis, may be desirable for risk assessments in certain populations. However, the sensitivity of serum for detecting anticoagulant rodenticides (ARs) is not well studied. Paired liver and serum samples from 43 RTHAs were evaluated from 2017 to 2019. In liver tissue, 100% of birds were positive for ARs, with the SGARs brodifacoum, bromadiolone, and difethialone identified most frequently; 91% of birds had liver residues of 2 to 4 ARs. These findings represent the highest exposure both to ARs overall and to multiple ARs in RTHAs compared to previous studies. All birds diagnosed with AR toxicosis (n = 14) were positive for ARs in serum; however, all subclinically exposed birds (n = 29) were negative in serum. These data show that exposure to SGARs remains widespread in RTHAs in this geographic area. In addition, although serum analysis is not sensitive for detecting sublethal exposures in RTHAs, it can potentially support a diagnosis of AR toxicosis in conjunction with other consistent signs. Environ Toxicol Chem 2020;39:2325-2335. © 2020 SETAC.

When wildlife forage and/or live in urban habitats, they often experience a shift in resource availability and dietary quality. Some species even use human handouts, such as bread, as well as human refuse, as a large part of their new diets; yet the influences of this nutritional shift on health and survival remain unclear. American white ibises are increasingly being seen in urban areas in Florida; they collect handouts, such as bread and other food items, from humans in parks, and are also found foraging on anthropogenic sources in trash heaps. We hypothesized that the consumption of these new anthropogenic food sources may trigger increases in indicators of physiological challenge and dampen immune responses. We tested this experimentally by raising 20 white ibis nestlings in captivity, and exposing 10 to a simulated anthropogenic diet (including the addition of white bread and a reduction in seafood content) while maintaining 10 on a diet similar to what ibises consume in more natural environments. We then tested two indicators of physiological challenge (corticosterone and heat shock protein 70), assessed innate immunity in these birds via bactericidal assays and an in vitro carbon clearance assay, and adaptive immunity using a phytohemagglutinin skin test. The anthropogenic diet depressed the development of the ability to kill Salmonella paratyphi in culture. Our results suggest that consuming an anthropogenic diet may be detrimental in terms of the ability to battle a pathogenic bacterial species, but there was little effect on indicators of physiological challenge and other immunological measures., White ibises are increasingly found foraging in urban environments, and previous work has shown that ibises in urban environments have elevated bactericidal capacities and depressed stress responses. We tested whether intake of an anthropogenic diet may explain those differences. An anthropogenic diet inhibited the development of bactericidal capacity against a pathogenic strain of bacteria.

Time is a fundamental component of ecological processes. How animal behavior changes over time has been explored through well-known ecological theories like niche partitioning and predator–prey dynamics. Yet, changes in animal behavior within the shorter 24-hr light–dark cycle have largely gone unstudied. Understanding if an animal can adjust their temporal activity to mitigate or adapt to environmental change has become a recent topic of discussion and is important for effective wildlife management and conservation. While spatial habitat is a fundamental consideration in wildlife management and conservation, temporal habitat is often ignored. We formulated a temporal resource selection model to quantify the diel behavior of 8 mammal species across 10 US cities. We found high variability in diel activity patterns within and among species and species-specific correlations between diel activity and human population density, impervious land cover, available greenspace, vegetation cover, and mean daily temperature. We also found that some species may modulate temporal behaviors to manage both natural and anthropogenic risks. Our results highlight the complexity with which temporal activity patterns interact with local environmental characteristics, and suggest that urban mammals may use time along the 24-hr cycle to reduce risk, adapt, and therefore persist, and in some cases thrive, in human-dominated ecosystems.

Time is a fundamental component of ecological processes. How animal behavior changes over time has been explored through well-known ecological theories like niche partitioning and predator-prey dynamics. Yet, changes in animal behavior within the shorter 24-hour light-dark cycle have largely gone unstudied. Understanding if an animal can adjust their temporal activity to mitigate or adapt to environmental change has become a recent topic of discussion and is important for effective wildlife management and conservation. While spatial habitat is a fundamental consideration in wildlife management and conservation, temporal habitat is often ignored. We formulated a temporal resource selection model to quantify the diel behavior of eight mammal species across ten U.S. cities. We found high variability in diel activity patterns within and among species and species-specific correlations between diel activity and human population density, impervious land cover, available greenspace, vegetation cover, and mean daily temperature. We also found that some species may modulate temporal behaviors to manage both natural and anthropogenic risks. Our results highlight the complexity with which temporal activity patterns interact with local environmental characteristics, and suggest that urban mammals may use time along the 24-hour cycle to reduce risk, adapt, and therefore persist in human-dominated ecosystems.

American black bears (Ursus americanus) are increasingly reported to develop mange. This report describes a case of mange associated with a Chorioptes species, which has not previously been reported, to our knowledge, in free-ranging black bears. Basic clinical findings as well as methods of identification for this mite are provided.

Birds live on a human-dominated planet. Over half of Earth’s ice-free land area has been modified by anthropogenic disturbance including deforestation, agriculture, and urbanization, impacting ecosystems around the world. Disturbances associated with these land use types, such as habitat loss, fragmentation, and pollution, influence the dynamics between birds, their pathogens, and the environment they share. Such shifts in disease dynamics can arise through the impacts of land use change on aspects of hosts, vectors, and/or pathogens, including vector and host abundance, behavior, and physiology, and through pathogen persistence in the environment. To address this complexity, the major causes of land use change that can impact birds across diverse ecosystems are described. The chapter then discusses key changes associated with land use change such as habitat loss, pollution, and anthropogenic resources that are relevant to avian disease ecology. These key changes are followed by a synthesis of documented changes in avian health with urbanization, the fastest growing type of land use change on Earth. The chapter closes with relevant implications for One Health systems and future directions for advancing avian disease ecology in rapidly changing landscapes.

Cities are intended to be places for people to live, but some animals survive and even thrive in cities. Animals that are smaller, have more general diets, and are more intelligent or adaptable are especially good at city life. Many of these wildlife species have learned special behaviors to help them survive in urban areas. Scientists use many tools to study these animals because understanding wildlife in cities can help people learn to live with them. There are many things you can do to help scientists learn more about the animals you see every day and make your neighborhood a better place for wild animals.

Urban rats are widely distributed pests that have negative effects on public health and property. It is crucial to understand their distribution to inform control efforts and address drivers of rat presence. Analysing public rat complaints can help assess urban rat distribution and identify factors supporting rat populations. Both social and environmental factors could promote rat complaints and must be integrated to understand rat distributions. We analysed rat complaints made between 2011 and 2017 in Chicago, a city with growing rat problems and stark wealth inequality. We examined whether rat complaints at the census tract level are associated with factors that could influence rat abundance, rats’ visibility to humans, and the likelihood of people making a complaint. Complaints were significantly positively correlated with anthropogenic factors hypothesized to promote rat abundance (restaurants, older buildings, garbage complaints, and dog waste complaints) or rat visibility (building construction/demolition activity), and factors hypothesized to increase the likelihood of complaining (human population density, more owner-occupied homes); we also found that complaints were highest in the summer. Our results suggest that conflicts between residents and rats are mainly driven by seasonal variation in rat abundance and human activity and could be mitigated with strategies such as securing food waste from residential and commercial sources. Accounting for social factors such as population density, construction and demolition activity, and home ownership versus rental can also help cities more accurately predict blocks at higher risk of rat conflicts.

Understanding how biodiversity responds to urbanization is challenging, due in part to the single-city focus of most urban ecological research. Here, we delineate continent-scale patterns in urban species assemblages by leveraging data from a multi-city camera trap survey and quantify how differences in greenspace availability and average housing density among 10 North American cities relate to the distribution of eight widespread North American mammals. To do so, we deployed camera traps at 569 sites across these ten cities between 18 June and 14 August. Most data came from 2017, though some cities contributed 2016 or 2018 data if it was available. We found that the magnitude and direction of most species' responses to urbanization within a city were associated with landscape-scale differences among cities. For example, eastern gray squirrel (Sciurus carolinensis), fox squirrel (Sciurus niger), and red fox (Vulpes vulpes) responses to urbanization changed from negative to positive once the proportion of green space within a city was >~20%. Likewise, raccoon (Procyon lotor) and Virginia opossum (Didelphis virginiana) responses to urbanization changed from positive to negative once the average housing density of a city exceeded about 700 housing units/km2 . We also found that local species richness within cities consistently declined with urbanization in only the more densely developed cities (>~700 housing units/km2 ). Given our results, it may therefore be possible to design cities to better support biodiversity and reduce the negative influence of urbanization on wildlife by, for example, increasing the amount of green space within a city. Additionally, it may be most important for densely populated cities to find innovative solutions to bolster wildlife resilience because they were the most likely to observe diversity losses of common urban species.

Background Encounters with rats in urban areas increase risk of human exposure to rat-associated zoonotic pathogens and act as a stressor associated with psychological distress. The frequency and nature of human-rat encounters may be altered by social distancing policies to mitigate the COVID-19 pandemic. For example, restaurant closures may reduce food availability for rats and promote rat activity in nearby residential areas, thus increasing public health risks during a period of public health crisis. In this study, we aimed to identify factors associated with increased perceived exposure to rats during a stay-at-home order, describe residents’ encounters with rats relevant to their health and well-being, and identify factors associated with increased use of rodent control. Methods Urban residents in Chicago, a large city with growing concerns about rats and health disparities, completed an online questionnaire including fixed response and open-ended questions during the spring 2020 stay-at-home order. Analyses included ordinal multivariate regression, spatial analysis, and thematic analysis for open-ended responses. Results Overall, 21% of respondents (n = 835) reported an increase in rat sightings around their homes during the stay-at-home order and increased rat sightings was positively associated with proximity to restaurants, low-rise apartment buildings, and rat feces in the home (p ≤ 0.01). Many respondents described feeling unsafe using their patio or yard, and afraid of rats entering their home or spreading disease. Greater engagement with rodent control was associated with property ownership, information about rat control, and areas with lower incomes (p ≤ 0.01). Conclusions More frequent rat encounters may be an unanticipated public health concern during periods of social distancing, especially in restaurant-dense areas or in low-rise apartment buildings. Rat presence may also limit residents’ ability to enjoy nearby outdoor spaces, which otherwise might buffer stress experienced during a stay-at-home order. Proactive rat control may be needed to mitigate rat-associated health risks during future stay-at-home orders.

Camera traps are an increasingly popular tool to monitor wildlife distributions. However, traditional analytical approaches to camera trap data are difficult to apply to visible wildlife characteristics in single images, such as infection status. Several parasites produce visible signs of infection that could be sampled via camera traps. Sarcoptic mange Sarcoptes scabiei is an ideal disease to study using cameras because it results in visible hair loss and affects a broad host range. Here, we developed a multi-state occupancy model to estimate the occurrence of mange in coyotes Canis latrans across an urban gradient. This model incorporates a secondary detection function for apparent by-image infection status to provide detection-corrected estimates of mange occurrence. We analysed a multi-year camera trap dataset in Chicago, Illinois, United States, to test whether the apparent occurrence of sarcoptic mange in coyotes Canis latrans increases with urbanization or varies through time. We documented visible signs consistent with current or recovering mange infection and variables we hypothesized would improve mange detection: The proportion of the coyote in frame, image blur and whether the image was in colour. We were more likely to detect coyotes with mange in images that were less blurry, in colour, and if a greater proportion of the coyote was visible. Mangy coyote occupancy was significantly higher in urban developed areas with low housing density and higher canopy cover whereas coyote occupancy, mangy or otherwise, decreased with urbanization. By incorporating image quality into our by-image detection function, we provide a robust method to non-invasively survey visible aspects of wildlife health with camera traps. Apparently mangy coyotes were associated with low-density forested neighbourhoods, which may offer vegetated areas while containing sources of anthropogenic resources. This association may contribute to human-wildlife conflict and reinforces posited relationships between infection risk and habitat use. More generally, our model could provide detection-corrected occupancy estimates of visible characteristics that vary by image such as body condition or injuries.

Background The microorganisms populating the gastro-intestinal tract of vertebrates, collectively known as “microbiota”, play an essential role in digestion and are important in regulating the immune response. Whereas the intestinal microbiota in humans and model organisms has been studied for many years, much less is known about the microbiota populating the intestinal tract of wild animals. Results The relatively large number of raptors admitted to the Tufts Wildlife Clinic on the Cummings School of Veterinary Medicine at Tufts University campus provided a unique opportunity to investigate the bacterial microbiota in these birds. Opportunistic collection of fecal samples from raptors of 7 different species in the orders Strigiformes, Accipitriformes, and Falconiformes with different medical histories generated a collection of 46 microbiota samples. Based on 16S amplicon sequencing of fecal DNA, large β-diversity values were observed. Many comparisons exceeded weighted UniFrac distances of 0.9. Microbiota diversity did not segregate with the taxonomy of the host; no significant difference between microbiota from Strigiformes and from Accipitriformes/Falconiformes were observed. In contrast, in a sample of 22 birds admitted for rehabilitation, a significant effect of captivity was found. The change in microbiota profile was driven by an expansion of the proportion of Actinobacteria. Based on a small number of raptors treated with anti-microbials, no significant effect of these treatments on microbiota α-diversity was observed. Conclusions The concept of “meta-organism conservation”, i.e., conservation efforts focused on the host and its intestinal microbiome has recently been proposed. The observed effect of captivity on the fecal microbiota is relevant to understanding the response of wildlife to captivity and optimizing wildlife rehabilitation and conservation efforts.

Rat-associated zoonoses transmitted through faeces or urine are of particular concern for public health because environmental exposure in homes and businesses may be frequent and undetected. To identify times and locations with greater public health risks from rats, we investigated whether rat characteristics, environmental features, socioeconomic factors, or season could predict rat infection risk across diverse urban neighbourhoods. In partnership with a pest management company, we sampled rats in 13 community areas along an income gradient in Chicago, a large city where concern about rats has increased in recent years. We collected kidneys for Leptospira spp. testing and colon contents for aerobic bacteria such as Salmonella spp. and Escherichia coli. Of 202 sampled rats, 5% carried Leptospira spp. and 22% carried E. coli. Rats were significantly more likely to carry Leptospira spp. on blocks with more standing water complaints in higher-income neighbourhoods (OR = 6.74, 95% CI: 1.54-29.39). Rats were significantly more likely to carry E. coli on blocks with more food vendors (OR = 9.94, 2.27-43.50) particularly in low-income neighbourhoods (OR = 0.26, 0.09-0.82) and in the spring (OR = 15.96, 2.90-88.62). We detected a high diversity of E. coli serovars but none contained major virulence factors. These associations between environmental features related to sanitation and infection risk in rats support transmission through water for Leptospira spp. and faecal-oral transmission for E. coli. We also found opposing relationships between zoonotic infection risk and income for these two pathogens. Thus, our results highlight the importance of sanitation for predicting zoonotic disease risks and including diverse urban areas in pathogen surveillance to mitigate public health risks from rats.

Restrictions on second-generation anticoagulant rodenticides (SGARs) in the United States, which were partially implemented in 2011, prohibit the sale of SGAR products through general consumer outlets to minimize use by non-professional or non-agricultural applicators. This study analyzed liver tissue from four species of birds of prey admitted to a wildlife clinic in Massachusetts, USA, from 2012-2016 for residues of anticoagulant rodenticides (ARs). Ninety-four birds were analyzed; 16 were symptomatic for AR toxicosis, and 78 asymptomatic. Ninety-six percent of all birds tested were positive for SGARs: 100% of those diagnosed with AR toxicosis ante-mortem and/or post-mortem and 95% of subclinically exposed birds. Brodifacoum was found in 95% of all birds. Sixty-six percent of all birds contained residues of two or more SGARs. A significant increase in exposures to multiple SGARs occurred in later years in the study. Pesticide use reports (PURs) filed with the Massachusetts Department of Agricultural Resources were reviewed to determine the frequency of use of different ARs by pest management professionals (PMPs) across five years. This study finds that the three SGARs favored by PMPs-bromadiolone, difethialone, brodifacoum-were present in combination in the majority of birds, with increases in multiple exposures driven by increased detections of bromadiolone and difethialone. Continued monitoring of AR residues in nontarget species following full implementation of sales and packaging restrictions in the US is needed in order to elucidate the role of PMP use of SGARs in wildlife exposures and to evaluate the effectiveness of current mitigation measures.

The American White Ibis (Eudocimus albus) is a nomadic wading bird that is increasing the amount of time spent foraging in urban areas, relying on artificial wetlands and other anthropogenic resources year-round. In this study, we explore whether and how American White Ibis association with urban environments is predictive of variation in the timing and length of behavioral seasons. Other urbanized species exhibit altered annual cycles such as loss of migratory behavior and year-round breeding related to consistent resource abundance, often related to intentional and unintentional provisioning. To determine if these same patterns of behavior were also present in White Ibis, we used behavioral change point analysis to segment the tracks of 41 ibis equipped with GPS backpacks to identify the initiation and duration of four behavioral seasons (non-breeding, pre-breeding, breeding, post-breeding) the degree of urban association. We found that intraspecific variation in urban habitat use had strong carryover effects on the timing and duration of behavioral seasons. This study revealed ibis with higher use of urban habitats in non-breeding seasons had longer non-breeding seasons and shorter breeding seasons that began earlier in the year compared to ibis that primarily use wetland habitats. The timing and duration of seasons also varied with ibis age, such that ibis spent more time engaged in breeding-related seasons as they aged. Juvenile and subadult ibis, though considered to be reproductively immature, also exhibit behavioral shifts in relation to breeding seasons. The behavioral patterns found in this study provide evidence that ibis are adapting their annual cycles and seasonal behaviors to exploit urban resources. Future research is needed to identify the effect of interactions between ibis urban association and age on behavioral season expression.

Twelve wild North American porcupines (Erethizon dorsatum) out of a total of 44 of this species examined in an 8-year period were diagnosed with dermatopathies while being cared for at two wildlife rehabilitation clinics. Biopsy and necropsy were performed on seven and five animals, respectively. Atypical dermatophytosis was diagnosed in all cases. Lesions consisted of diffuse severe epidermal hyperkeratosis and mild hyperplasia with mild lymphoplasmacytic dermatitis and no folliculitis. Dermatophytes were noted histologically as hyphae and spores in hair shafts, and follicular and epidermal keratin. Trichophyton sp. was grown in 5/6 animals where culture was performed, with a molecular diagnosis of Arthroderma benhamiae/Trichophyton mentagrophytes in these five cases. Metagenomic analysis of formalin-fixed paraffin-embedded tissue samples from three cases identified fungi from 17 orders in phyla Basidiomycota and Ascomycota. Alteration of therapy from ketaconazole, which was unsuccessful in four out of five early cases, to terbinafine or nitraconazole led to the resolution of disease and recovery to release in four subsequent animals. In all, six animals were euthanized or died due to dermatopathy, no cases resolved spontaneously, and six cases were resolved with therapy. The work we present demonstrates an atypical lesion and anatomical distribution due to dermatophytosis in a series of free-ranging wild porcupines and the successful development of novel techniques for extracting and sequencing nucleic acids from fungus in archival formalin-fixed paraffin-embedded animal tissue.

Transportation infrastructure can cause an ecological trap if it attracts wildlife for foraging and travel opportunities, while increasing the risk of mortality from collisions. This situation occurs for a vulnerable population of grizzly bears (Ursus arctos) in Banff National Park, Canada, where train strikes have become a leading cause of mortality. We explored this problem with analyses of rail-associated food attractants, habitat use of GPS-collared bears and patterns of past mortality. Bears appeared to be attracted to grain spilled from rail cars, enhanced growth of adjacent vegetation and train-killed ungulates with rail use that increased in spring and autumn, and in areas where trains slowed, topography was rugged, and human density was low. However, areas with higher grain deposits or greater use by bears did not predict sites of past mortality. The onset of reported train strikes occurred amid several other interacting changes in this landscape, including the cessation of lethal bear management, changes in the distribution and abundance of ungulates, increasing human use and new anthropogenic features. We posit that rapid learning by bears is critical to their persistence in this landscape and that this capacity might be enhanced to prevent train strikes in future with simple warning devices, such as the one we invented, that signal approaching trains.This article is part of the theme issue ‘Linking behaviour to dynamics of populations and communities: application of novel approaches in behavioural ecology to conservation’.

Microbial communities in the gastrointestinal tract influence many aspects of host health, including metabolism and susceptibility to pathogen colonization. These relationships and the environmental and individual factors that drive them are relatively unexplored for free-living wildlife. We quantified the relationships between urban habitat use, diet, and age with microbiome composition and diversity for 82 American white ibises (Eudocimus albus) captured along an urban gradient in south Florida and tested whether gut microbial diversity was associated withSalmonella entericaprevalence. Shifts in community composition were significantly associated with urban land cover and, to a lesser extent, diets higher in provisioned food. The diversity of genera was negatively associated with community composition associated with urban land cover, positively associated with age class, and negatively associated withSalmonellashedding. Our results suggest that shifts in both habitat use and diet for urban birds significantly alter gut microbial composition and diversity in ways that may influence health and pathogen susceptibility as species adapt to urban habitats.

Conversion of natural habitats into urban landscapes can expose wildlife to novel pathogens and alter pathogen transmission pathways. Because transmission is difficult to quantify for many wildlife pathogens, mathematical models paired with field observations can help select among competing transmission pathways that might operate in urban landscapes. Here we develop a mathematical model for the enteric bacteria Salmonella enterica in urban-foraging white ibis ( Eudocimus albus ) in south Florida as a case study to determine (i) the relative importance of contact-based versus environmental transmission among ibis and (ii) whether transmission can be supported by ibis alone or requires external sources of infection. We use biannual field prevalence data to restrict model outputs generated from a Latin hypercube sample of parameter space and select among competing transmission scenarios. We find the most support for transmission from environmental uptake rather than between-host contact and that ibis–ibis transmission alone could maintain low infection prevalence. Our analysis provides the first parameter estimates for Salmonella shedding and uptake in a wild bird and provides a key starting point for predicting how ibis response to urbanization alters their exposure to a multi-host zoonotic enteric pathogen. More broadly, our study provides an analytical roadmap to assess transmission pathways of multi-host wildlife pathogens in the face of scarce infection data.

Anticoagulant rodenticides (ARs) deployed to control rodent pest populations can increase the risk of pathogen infection for some wildlife. However, it is unknown whether ARs also increase infection risk for target rodents, which are common hosts for zoonotic (animal-to-human transmitted) pathogens. In this study, we tested whether rats exposed to ARs were more likely to be infected with zoonotic pathogens, specifically Leptospira spp. or Escherichia coli , after controlling for known predictors of infection (i.e. sex, age, body condition). We collected biological samples from 99 rats trapped in Chicago alleys and tested these for Leptospira infection, E. coli shedding and AR exposure. We found that rats that had been exposed to ARs and survived until the time of trapping, as well as older rats, were significantly more likely to be infected with Leptospira spp. than other rats. We found no significant association between E. coli shedding and any predictors. Our results show that human actions to manage rats can affect rat disease ecology and public health risks in unintended ways, and more broadly, contribute to a growing awareness of bidirectional relationships between humans and natural systems in cities.

Several species of urban-adapted carnivores, including coyotes (Canis latrans), use anthropogenic resources in residential areas, which may increase rates of encounters and conflict with people. These negative interactions might be reduced with more understanding of individual variation in the use of residential areas and if attractants were better predicted by residents and targeted for securement or removal. We fitted 19 urban coyotes with global positioning system (GPS) collars (11 healthy, 8 with sarcoptic mange [Sarcoptes scabiei]) and compared their selection for residential areas at different times of day. We also identified 173 clusters of GPS locations (representing foraging and bedding sites) and paired them with available sites to measure selection for anthropogenic food, shelter, and visual cover. Seventeen of 19 coyotes avoided residential areas in general, but lesser avoidance of residential areas occurred in animals that used these areas during the day. Backyards selected by coyotes were 66.7 times less likely to have fences, 22.2 times more likely to contain anthropogenic food, and had 3.3 times as much visual cover than available yards. Diseased coyotes were 9 times more likely than healthy animals to select for yards with anthropogenic food. Our results suggest that coarse measurements of habitat selection via land cover classes may underestimate the attraction to wildlife of particular features in residential areas. Greater management of these features by municipal governments, residents, and communities might reduce animal use, disease transmission, and human-wildlife conflict for diverse species in urban areas. © 2017 The Wildlife Society.

Humans provide supplemental food to wildlife under many contexts, ranging from professional feeding areas for game species to backyard bird feeders. Such resources benefit wildlife by providing reliable resources during periods of food shortages, but may also alter the risk of pathogen transmission and development of disease. While several reviews have summarized the detrimental effects of supplemental food on infection risk, we conducted a comprehensive review to quantify support for mechanisms by which intentional wildlife feeding influences host condition (i.e. malnutrition and stress) and pathogen transmission on a global scale and provide a framework to mitigate these risks. We also examined whether the purpose of feeding, whether for game management, conservation, tourism, or in residential areas, influenced health outcomes. We found 115 studies that evaluated the health of wildlife with supplementary feeding, representing 68 species in 35 countries, although nearly half (46% of studies) were from North America. Supplemental feeding tended to increase the risk of pathogen transmission by increasing contact rates between hosts (95%) and promoting pathogen accumulation at feeders or the surrounding environment (77%). Provisioned food was also often a source of immunosuppressive contaminants (80%). Feeding associated with tourism frequently increased wildlife stress, rates of injury, pathogen prevalence, or malnutrition (85%), while feeding for conservation purposes had mostly positive effects on wildlife health (63%). We recommend adopting feeding practices that validate the nutritional appropriateness of wildlife feed for the target species, make food available at lower densities for short periods at unpredictable times and places to prevent aggregation, and avoid feeding during times of migration, pulses of new recruits, and epidemics. These strategies will help retain the recreational and management benefits of wildlife provisioning while mitigating negative effects for many species around the world.

Anthropogenic food is often concentrated in cities where it can attract wildlife, promote conflict with people, and potentially spread disease. Although these associations are well-documented for conventional garbage, they are unexplored for many seemingly innocuous and even environmentally friendly attractants such as piles of compost. In this study, we tested the hypothesis that municipal piles of compost are underappreciated and potentially important contributors to a recent rise in encounters with urban-adapted wildlife by attracting wildlife and promoting the spread of wildlife disease. We used remote cameras to compare visitation rates to compost piles and urban natural areas by coyotes (Canis latrans). For each site type, we assessed photographs for evidence of ectoparasites, screened scats for endoparasites, and sampled compost for harmful mycotoxins. At compost piles, visitation rates were eight times more frequent, coyotes with visible parasitic infections were 4.5 times more common, scats were 10 times more likely to contain tapeworm eggs, and mycotoxins were detected in 86% of piles and often at concentrations higher than legal limits for animal feed. Greater securement of compost waste in cities may reduce encounters with animals, susceptibility to and spread of disease, and rates of human-wildlife conflict for coyotes and other urban-adapted species.

Food provisioning can change wildlife pathogen dynamics by altering host susceptibility via nutrition and/or through shifts in foraging behavior and space use. We used the American white ibis (Eudocimus albus), a wading bird increasingly observed in urban parks, as a model to study synergistic relationships between food provisioning and infection risk across an urban gradient in South Florida. We tested whether Salmonella prevalence was associated with changes in ibis diet (stable isotope analysis), space use (site fidelity via GPS tracking), and local density (flock size). We compared the relative importance of these mechanisms by ranking candidate models using logistic regression. We detected Salmonella in 27% of white ibises (n = 233) sampled at 15 sites. Ibises with diets higher in anthropogenic food exhibited higher site fidelity. Salmonella prevalence was higher at sites where ibises exhibited greater site fidelity and Salmonella was more prevalent in soil and water. Overlap in Salmonella serotypes between ibises and soil or water also was more likely at sites where ibises exhibited higher site fidelity. Our results suggest that repeated use of foraging areas may increase Salmonella exposure for birds if foraging areas are contaminated from animal feces, human waste, or other bacterial sources. Limiting wildlife feeding in parks-perhaps best achieved through understanding the motivations for feeding, education, and enforcement-may reduce health risks for wildlife and the public.

Reports of encounters between people and generalist urban-adapted carnivores are increasing around the world. In North America, coyotes Canis latrans are among the carnivores that appear to be especially capable of incorporating novel anthropogenic food types, including those found in cities. Consuming anthropogenic food may benefi t coyotes by increasing their dietary diversity, but it may also lead to increased interactions and confl icts with humans. To test these hypotheses, we compared the diets of urban and rural coyotes from two urban and three rural sites spanning 32 200 km 2 in Alberta, Canada. We analyzed scat samples to calculate diet diversity at the level of both individuals (species per scat) and populations (Shannon index) and to determine the frequency of anthropogenic food consumption. We complemented this comparison with stable isotope analyses of hair samples taken from individual urban and rural coyotes that were or were not reported by the public for repeatedly visiting backyards and schoolyards during the day. Relative to rural coyotes, urban coyotes had more diverse diets at the level of both individuals and populations, consumed anthropogenic food more often, and animals less often, than rural coyotes. Although urban coyotes assimilated more anthropogenic food than the rural coyotes overall, the urban coyotes reported for confl ict assimilated less protein and were more likely to be diseased. Our results suggest that processed anthropogenic food may contribute to the success of urban coyotes, but does not entirely correlate with confl ict. Instead, some seemingly innocuous, but low-protein food sources such as bird feeders, compost, and cultivated fruit trees may contribute disproportionately to encounters with people for coyotes and other urban-adapted opportunistic carnivores.

Many species living in developed areas adjust the timing of their activity and habitat selection to avoid humans, which may reduce their risk of conflict, including vehicle collisions. Understanding the behavioral adaptations to vehicles exhibited by species that thrive in urban areas could improve the conservation of many species that are threatened by road-caused mortality. We explored these behaviors using the seasonal distribution of 80 road-killed coyotes (Canis latrans) collected by civic employees and by comparing the activity patterns (step lengths) and road crossings made by 19 coyotes fitted with GPS collars with 3-h fix rates, 7 of which were killed in vehicle collisions. Coyotes were collected on roads most often in spring and fall, which corresponded to the most rapid changes in day length in our northern study area and when collared road-killed coyotes were more active during rush hour. Among collared coyotes, those that were killed on roads were most active and crossed roads most frequently at dusk. By contrast, surviving animals were most active and crossed roads most often near midnight year round and surprisingly, exhibited less avoidance of roads than did road-killed coyotes. Our results suggest that risk of vehicle collision is lower for coyotes that restrict the times at which they cross roads but some coyotes do not or cannot. Such behavioral flexibility to adapt to the timing of human activity relative to exogenous cues such as dawn and dusk may contribute to differences both among and within wildlife species in rates of coexistence with humans.

Exposure to anticoagulant rodenticides (ARs) in birds of prey is widespread. Interpreting the significance of AR residues in tissue samples recovered from birds in field settings can be challenging for a variety of reasons, including uncertainty regarding the relevance of necropsy findings and the importance of residue levels in the absence of signs of poisoning. A thorough understanding of the pathophysiology of AR toxicosis is useful in evaluating the risks and effects of these toxicants on individual birds and populations. Knowledge of the pathophysiology also aids in recognizing ante-mortem and post-mortem signs of toxicosis. This chapter draws on ante-mortem and post-mortem observations from free-living birds of prey presented to a wildlife hospital to detail signs of poisoning and relates these clinical cases to published literature on AR toxicosis in birds of prey in both field and laboratory settings. Common difficulties in diagnosing AR toxicosis, such as differentiating hemorrhage resulting from poisoning as opposed to traumatic injury, are discussed. Current evidence regarding potential sub-lethal effects of ARs is reviewed. Several case studies that illustrate ante-mortem signs, clinical findings, and post-mortem signs in free-living birds diagnosed with AR toxicosis are presented.

During the winter of 2013-14, 22 Canada geese ( Branta canadensis ) were admitted to the Wildlife Clinic at the Cummings School of Veterinary Medicine at Tufts University with nonspecific neurologic abnormalities and emaciation. Five of these geese, along with three geese that were submitted dead, were evaluated via histopathology, immunohistochemistry, and reverse transcription PCR (RT-PCR) for bornaviruses. Histopathologically, six of the eight birds had lymphoplasmacytic encephalitis. One bird, which also had encephalitis, had a dilated esophagus. Lead poisoning, West Nile virus, avian influenza, and avian paramyxovirus infection were excluded from the diagnosis. Brain tissue from all eight geese was positive for bornaviral N-antigen on immunohistochemistry. Frozen brain tissue from five birds was available for bornavirus RT-PCR. Three of the five birds were positive for the bornavirus M gene. Formalin-fixed paraffin-embedded brain tissue was evaluated on the remaining three geese via RT-PCR, with one of these geese testing positive. A bornavirus was subsequently cultured in duck embryo fibroblasts from the brain of one Canada Goose. This virus genome was sequenced, and the virus was identified as aquatic bird bornavirus 1. We were unable to identify any unusual features of this genome that would account for its apparent pathogenicity, given that subclinical infection with bornavirus in waterfowl is common in North America.

The acute phase response is an important component of the early reaction of the immune system to insults including infection, inflammation, trauma, neoplasia, and stress. Acute phase proteins are valuable prognostic indicators in many mammalian species but have been poorly studied in reptiles thus far. This study examined 18 paired samples from loggerhead sea turtles (Caretta caretta) for changes observed during the rehabilitation period. Analyses performed included packed cell volume (PCV), hemoglobin binding protein, and plasma protein electrophoresis. Significant differences were observed in all of the protein electrophoresis values. Notably, the concentration of hemoglobin binding protein (as determined by a haptoglobin assay) increased in conjunction with rising total protein (by refractometry) and PCV. The results indicate that this assay may have the potential to be a useful tool in assessing the health of sea turtles.

Twelve wild North American porcupines (Erethizon dorsatum) out of a total of 44 of this species examined in an 8-year period were diagnosed with dermatopathies while being cared for at two wildlife rehabilitation clinics. Biopsy and necropsy were performed on seven and five animals, respectively. Atypical dermatophytosis was diagnosed in all cases. Lesions consisted of diffuse severe epidermal hyperkeratosis and mild hyperplasia with mild lymphoplasmacytic dermatitis and no folliculitis. Dermatophytes were noted histologically as hyphae and spores in hair shafts, and follicular and epidermal keratin. Trichophyton sp. was grown in 5/6 animals where culture was performed, with a molecular diagnosis of Arthroderma benhamiae/Trichophyton mentagrophytes in these five cases. Metagenomic analysis of formalin-fixed paraffin-embedded tissue samples from three cases identified fungi from 17 orders in phyla Basidiomycota and Ascomycota. Alteration of therapy from ketaconazole, which was unsuccessful in four out of five early cases, to terbinafine or nitraconazole led to the resolution of disease and recovery to release in four subsequent animals. In all, six animals were euthanized or died due to dermatopathy, no cases resolved spontaneously, and six cases were resolved with therapy. The work we present demonstrates an atypical lesion and anatomical distribution due to dermatophytosis in a series of free-ranging wild porcupines and the successful development of novel techniques for extracting and sequencing nucleic acids from fungus in archival formalin-fixed paraffin-embedded animal tissue.