222 results on '"Matthews TJ"'
Search Results
2. Interaction design for paediatric emergency VR training
- Author
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Matthews, Tj, Tian, Feng, and Dolby, Tom
- Published
- 2020
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3. Maternal obesity and the human milk metabolome: associations with infant body composition and postnatal weight gain
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Isganaitis E, Venditti S, Matthews TJ, Lerin-Martinez C, Demerath EW, and Fields DA
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metabolomics ,body composition ,breast milk ,maternal obesity ,infant ,human milk oligosaccharides ,human milk - Abstract
BACKGROUND: Maternal obesity is a risk factor for childhood obesity; this is a major public health concern given that ~40% of pregnant women are either overweight or obese. Whether differences in milk composition in lean compared with obese women contribute to childhood obesity is unclear. OBJECTIVES: We aimed to analyze relationships between maternal obesity and human milk metabolites, infant body composition, and postnatal weight gain. METHODS: This was a prospective study in which mothers intending to breastfeed exclusively, and their newborn infants, were enrolled at delivery (n = 35 mother-infant pairs). We excluded mothers with diabetes, other medical conditions, or pregnancy complications. Participants were grouped by maternal prepregnancy BMI
- Published
- 2019
4. Island species–area relationships and species–accumulation curves are not equivalent: an analysis of habitat island datasets
- Author
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Whittaker, RJ, Matthews, TJ, Trinantis, KA, Rigal, F, Borregaard, MK, and Guilhaumon, F
- Abstract
Aim The relationship between species number and area is of fundamental importance within macroecology and conservation science. Yet, the implications of different means of quantitative depiction of the relationship remain contentious. We set out (i) to establish the variation in form of the relationship between two distinct methods applied to the same habitat island datasets, (ii) to explore the relevance of several key dataset properties for variation in parameters of these relationships, and (iii) to assess implications for applications of the resulting models. Locations Global Methods Through literature search we compiled 97 habitat island datasets. For each we analysed the form of the island species–area relationship (ISAR) and several versions of species accumulation curve (SAC), giving priority to a randomized form (Ran-SAC). Having established the validity of the power model, we compared the slopes (z-values) between the ISAR and the SAC for each dataset. We used boosted regression tree and simulation analyses to investigate the effect of nestedness and other variables in driving observed differences in z values between ISARs and SACs. Results The Ran-SAC was steeper than the ISAR in 77% of datasets. The differences were primarily driven by the degree of nestedness, although other variables (e.g. number of islands in a dataset) were also important. The ISAR was often a poor predictor of archipelago species richness. Main conclusions Slopes of the ISAR and SAC for the same data set can vary substantially, revealing their non-equivalence, with implications for applications of species–area curve parameters in conservation science. For example, the ISAR was a poor predictor of archipelagic richness in datasets with a low degree of nestedness. Caution should be employed when using the ISAR for extrapolation and prediction purposes in habitat island systems.
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- 2016
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5. Genitourinary anomalies associated with Klippel-Feil syndrome
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Moore, WB, Matthews, TJ, and Rabinowitz, R
- Published
- 1975
6. Human immunodeficiency virus (HIV)-infected human blood monocytes and peritoneal macrophages have reduced anticryptococcal activity whereas HIV-infected alveolar macrophages retain normal activity
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J B Weinberg, Matthews Tj, M. L. Cameron, and Donald L. Granger
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Cell Survival ,Virus Replication ,Virus ,Monocytes ,Microbiology ,Phagocytosis ,Macrophages, Alveolar ,medicine ,Immunology and Allergy ,Macrophage ,Humans ,Tropism ,Cells, Cultured ,Cryptococcus neoformans ,biology ,Monocyte ,Mononuclear phagocyte system ,biology.organism_classification ,Virology ,Infectious Diseases ,medicine.anatomical_structure ,Viral replication ,Tissue tropism ,HIV-1 ,Macrophages, Peritoneal - Abstract
Human immunodeficiency virus type 1 (HIV-1) infection causes immune dysfunction. Mononuclear phagocytes (MNP) are immune effector cells against some intracellular pathogens and reservoirs for HIV-1. This study determined effects of HIV-1 on MNP-mediated antifungal function. MNP from seronegative volunteers were inoculated with HIVBal or HIVIIIB. MNP were infected with an avirulent clone of Cryptococcus neoformans; 48 h later, MNP were lysed and yeasts were counted. Viral replication was determined by reverse transcriptase and by visualization of cytopathic effects. Monocytes and peritoneal macrophages exhibited reduced anticryptococcal activity 14 days after infection with HIVBal but retained normal activity when infected with HIVIIIB. Loss of anticryptococcal activity correlated with viral replication. Alveolar macrophages retained normal anticryptococcal activity whether infected with HIVBal or HIVIIIB. In vitro MNP-mediated antifungal activity may be altered by HIV-1 infection; this altered activity appears to depend on viral tropism, viral replication, and MNP tissue origin.
- Published
- 1994
7. Preparation and characterization of an intravenous solution of IgG from human immunodeficiency virus-seropositive donors
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Cummins, LM, primary, Weinhold, KJ, additional, Matthews, TJ, additional, Langlois, AJ, additional, Perno, CF, additional, Condie, RM, additional, and Allain, JP, additional
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- 1991
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8. A dose-ranging study of a prototype synthetic HIV-1MN V3 branched peptide vaccine. The National Institute of Allergy and Infectious Diseases AIDS Vaccine Evaluation Group.
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Gorse GJ, Keefer MC, Belshe RB, Matthews TJ, Forrest BD, Hsieh RH, Koff WC, Hanson CV, Dolin R, Weinhold KJ, Frey SE, Ketter N, Fast PE, Gorse, G J, Keefer, M C, Belshe, R B, Matthews, T J, Forrest, B D, Hsieh, R H, and Koff, W C
- Abstract
A phase I double-blind trial was done to examine the safety and immunogenicity of a prototype synthetic human immunodeficiency virus type 1 MN strain (HIV-1MN) third variable region domain (V3) branched peptide vaccine in HIV-1-uninfected healthy adult volunteers. Subjects were randomly assigned to receive 20, 100, or 500 micrograms of vaccine or alum adjuvant control on days 0, 28, and 168. The vaccine was well-tolerated and appeared safe. Induction of binding antibody to V3 MN branched peptide was vaccine dose-related and was detectable in 9 of 10 subjects in the highest-vaccine-dose group. HIV-1MN-neutralizing antibody was detected after the third 500-micrograms dose in 8 of 10 subjects at the 90% neutralization end point. V3 MN peptide stimulated lymphocyte proliferation in 15 (75%) of 20 subjects after vaccination. In conclusion, this prototype vaccine was safe and it induced humoral and cell-mediated immune responses. [ABSTRACT FROM AUTHOR]
- Published
- 1996
9. Factors affecting reliability of dominance orders in the domestic chicken (White Leghorn)
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Taylor Db, Douglas K. Candland, and Matthews Tj
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Appetitive Behavior ,Competitive Behavior ,General Medicine ,Biology ,Aggression ,Social Dominance ,Statistics ,Animals ,Humans ,Female ,Chickens ,Social psychology ,Reliability (statistics) ,Dominance (genetics) - Published
- 1968
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10. Heart Rate and Defecation Frequency as Measures of Rodent Emotionality
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Pack Kd, Candland Dk, and Matthews Tj
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Male ,medicine.medical_specialty ,Rodent ,biology ,business.industry ,Emotions ,Physiology ,General Medicine ,Environment ,Rats ,Endocrinology ,Heart Rate ,Emotionality ,Internal medicine ,biology.animal ,Heart rate ,medicine ,Animals ,Defecation ,Female ,business - Published
- 1967
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11. Pavlovian and instrumental determinants of response suppression in the pigeon
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Carr Ld, McHugh Tg, and Matthews Tj
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Reinforcement Schedule ,Time Factors ,Photic Stimulation ,Conditioning, Classical ,Pain ,Response suppression ,General Medicine ,Extinction, Psychological ,Food ,Animals ,Conditioning, Operant ,Cues ,Psychology ,Columbidae ,Neuroscience - Published
- 1974
12. Experimentation with the estimation of the provision for outstanding claims in nonlife insurance
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Taylor, GC, Matthews, TJ, Taylor, GC, and Matthews, TJ
- Published
- 1977
13. Aseptic necrosis of the knee: bone scintigraphy
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Burt, RW, primary and Matthews, TJ, additional
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- 1982
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14. Mapping multi-dimensional variability in water stress strategies across temperate forests.
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Liu D, Esquivel-Muelbert A, Acil N, Astigarraga J, Cienciala E, Fridman J, Kunstler G, Matthews TJ, Ruiz-Benito P, Sadler JP, Schelhaas MJ, Suvanto S, Talarczyk A, Woodall CW, Zavala MA, Zhang C, and Pugh TAM
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- Europe, Dehydration, Water metabolism, Plant Leaves, United States, Climate, Biomass, Temperature, Climate Change, Forests, Trees physiology
- Abstract
Increasing water stress is emerging as a global phenomenon, and is anticipated to have a marked impact on forest function. The role of tree functional strategies is pivotal in regulating forest fitness and their ability to cope with water stress. However, how the functional strategies found at the tree or species level scale up to characterise forest communities and their variation across regions is not yet well-established. By combining eight water-stress-related functional traits with forest inventory data from the USA and Europe, we investigated the community-level trait coordination and the biogeographic patterns of trait associations for woody plants, and analysed the relationships between the trait associations and climate factors. We find that the trait associations at the community level are consistent with those found at the species level. Traits associated with acquisitive-conservative strategies forms one dimension of variation, while leaf turgor loss point, associated with stomatal water regulation strategy, loads along a second dimension. Surprisingly, spatial patterns of community-level trait association are better explained by temperature than by aridity, suggesting a temperature-driven adaptation. These findings provide a basis to build predictions of forest response under water stress, with particular potential to improve simulations of tree mortality and forest biomass accumulation in a changing climate., (© 2024. Crown.)
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- 2024
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15. The global loss of avian functional and phylogenetic diversity from anthropogenic extinctions.
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Matthews TJ, Triantis KA, Wayman JP, Martin TE, Hume JP, Cardoso P, Faurby S, Mendenhall CD, Dufour P, Rigal F, Cooke R, Whittaker RJ, Pigot AL, Thébaud C, Jørgensen MW, Benavides E, Soares FC, Ulrich W, Kubota Y, Sadler JP, Tobias JA, and Sayol F
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- Animals, Humans, Biological Evolution, Islands, Phylogeny, Anthropogenic Effects, Biodiversity, Birds classification, Extinction, Biological
- Abstract
Humans have been driving a global erosion of species richness for millennia, but the consequences of past extinctions for other dimensions of biodiversity-functional and phylogenetic diversity-are poorly understood. In this work, we show that, since the Late Pleistocene, the extinction of 610 bird species has caused a disproportionate loss of the global avian functional space along with ~3 billion years of unique evolutionary history. For island endemics, proportional losses have been even greater. Projected future extinctions of more than 1000 species over the next two centuries will incur further substantial reductions in functional and phylogenetic diversity. These results highlight the severe consequences of the ongoing biodiversity crisis and the urgent need to identify the ecological functions being lost through extinction.
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- 2024
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16. Unravelling the complexities of biotic homogenization and heterogenization in the British avifauna.
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Wayman JP, Sadler JP, Martin TE, Graham LJ, White HJ, Tobias JA, and Matthews TJ
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- Animals, United Kingdom, Ecosystem, Bayes Theorem, Phylogeny, Animal Distribution, Birds physiology, Biodiversity
- Abstract
Biotic homogenization is a process whereby species assemblages become more similar through time. The standard way of identifying the process of biotic homogenization is to look for decreases in spatial beta-diversity. However, using a single assemblage-level metric to assess homogenization can mask important changes in the occupancy patterns of individual species. Here, we analysed changes in the spatial beta-diversity patterns (i.e. biotic heterogenization or homogenization) of British bird assemblages within 30 km × 30 km regions between two periods (1988-1991 and 2008-2011). We partitioned the change in spatial beta-diversity into extirpation and colonization-resultant change (i.e. change in spatial beta-diversity within each region resulting from both extirpation and colonization). We used measures of abiotic change in combination with Bayesian modelling to disentangle the drivers of biotic heterogenization and homogenization. We detected both heterogenization and homogenization across the two time periods and three measures of diversity (taxonomic, phylogenetic, and functional). In addition, both extirpation and colonization contributed to the observed changes, with heterogenization mainly driven by extirpation and homogenization by colonization. These assemblage-level changes were primarily due to shifting occupancy patterns of generalist species. Compared to habitat generalists, habitat specialists had significantly (i) higher average contributions to colonization-resultant change (indicating heterogenization within a region due to colonization) and (ii) lower average contributions to extirpation-resultant change (indicating homogenization from extirpation). Generalists showed the opposite pattern. Increased extirpation-resultant homogenization within regions was associated with increased urban land cover and decreased habitat diversity, precipitation, and temperature. Changes in extirpation-resultant heterogenization and colonization-resultant heterogenization were associated with differences in elevation between regions and changes in temperature and land cover. Many of the 'winners' (i.e. species that increased in occupancy) were species that had benefitted from conservation action (e.g. buzzard (Buteo buteo)). The 'losers' (i.e. those that decreased in occupancy) consisted primarily of previously common species, such as cuckoo (Cuculus canorus). Our results show that focusing purely on changes in spatial beta-diversity over time may obscure important information about how changes in the occupancy patterns of individual species contribute to homogenization and heterogenization., (© 2024 The Author(s). Journal of Animal Ecology published by John Wiley & Sons Ltd on behalf of British Ecological Society.)
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- 2024
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17. Power-law scaling in intratumoral microbiota of colorectal cancer.
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Dovrolis N, Gazouli M, Rigal F, Whittaker RJ, Matthews TJ, Georgiou K, Theodoropoulos G, and Triantis KA
- Abstract
It has recently been proposed that the study of microbial dynamics in humans may gain insights from island biogeographical theory. Here, we test whether the diversity of the intratumoral microbiota of colorectal cancer tumors (CRC) follows a power law with tumor size akin to the island species-area relationship. We confirm a direct correlation between the quantity of Amplicon Sequence Variants (ASVs) within CRC tumors and tumor sizes, following a (log)power model, explaining 47% of the variation. Understanding the processes involved, potentially through the analogy of tumors and islands, may ultimately contribute to future clinical and therapeutic strategies., (© 2024. The Author(s).)
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- 2024
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18. Birds as bioindicators of plastic pollution in terrestrial and freshwater environments: A 30-year review.
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Mansfield I, Reynolds SJ, Lynch I, Matthews TJ, and Sadler JP
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- Animals, Plastics, Environmental Biomarkers, Environmental Monitoring, Fresh Water, Birds, Ecosystem, Microplastics, Water Pollutants, Chemical analysis
- Abstract
Plastic pollution is a global concern that has grown ever more acute in recent years. Most research has focused on the impact of plastic pollution in marine environments. However, plastic is increasingly being detected in terrestrial and freshwater environments with key inland sources including landfills, where it is accessible to a wide range of organisms. Birds are effective bioindicators of pollutants for many reasons, including their high mobility and high intra- and interspecific variation in trophic levels. Freshwater and terrestrial bird species are under-represented in plastic pollution research compared to marine species. We reviewed 106 studies (spanning from 1994 onwards) that have detected plastics in bird species dwelling in freshwater and/or terrestrial habitats, identifying knowledge gaps. Seventy-two studies focused solely on macroplastics (fragments >5 mm), compared to 22 microplastic (fragments <5 mm) studies. A further 12 studies identified plastics as both microplastics and macroplastics. No study investigated nanoplastic (particles <100 nm) exposure. Research to date has geographical and species' biases while ignoring nanoplastic sequestration in free-living freshwater, terrestrial and marine bird species. Building on the baseline search presented here, we urge researchers to develop and validate standardised field sampling techniques and laboratory analytical protocols such as Raman spectroscopy to allow for the quantification and identification of micro- and nanoplastics in terrestrial and freshwater environments and the species therein. Future studies should consistently report the internalised and background concentrations, types, sizes and forms of plastics. This will enable a better understanding of the sources of plastic pollution and their routes of exposure to birds of terrestrial and freshwater environments, providing a more comprehensive insight into the potential impacts on birds., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)
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- 2024
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19. Land-use change interacts with island biogeography to alter bird community assembly.
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Zhao Y, Mendenhall CD, Matthews TJ, Wang D, Li W, Liu X, Tang S, Han P, Wei G, Kang Y, Wu C, Wang R, Zeng D, Frishkoff LO, and Si X
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- Animals, Humans, Phylogeny, Islands, Ecosystem, Birds, Biodiversity
- Abstract
Anthropogenic activities have reshaped biodiversity on islands worldwide. However, it remains unclear how island attributes and land-use change interactively shape multiple facets of island biodiversity through community assembly processes. To answer this, we conducted bird surveys in various land-use types (mainly forest and farmland) using transects on 34 oceanic land-bridge islands in the largest archipelago of China. We found that bird species richness increased with island area and decreased with isolation, regardless of the intensity of land-use change. However, forest-dominated habitats exhibited lower richness than farmland-dominated habitats. Island bird assemblages generally comprised species that share more similar traits or evolutionary histories (i.e. functional and/or phylogenetic clustering) than expected if assemblages were randomly assembled. Contrary to our expectations, we observed that bird assemblages in forest-dominated habitats were more clustered on large and close islands, whereas assemblages in farmland-dominated habitats were more clustered on small islands. These contrasting results indicate that land-use change interacts with island biogeography to alter the community assembly of birds on inhabited islands. Our findings emphasize the importance of incorporating human-modified habitats when examining the community assembly of island biota, and further suggest that agricultural landscapes on large islands may play essential roles in protecting countryside island biodiversity.
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- 2024
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20. Extra terrestrials: drought creates niche space for rare invertebrates in a large-scale and long-term field experiment.
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Aspin TWH, Khamis K, Matthews TJ, Williams GMD, Windsor FM, Woodward G, and Ledger ME
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- Animals, Ecosystem, Biodiversity, Biota, Droughts, Invertebrates
- Abstract
Freshwater habitats are drying more frequently and for longer under the combined pressures of climate change and overabstraction. Unsurprisingly, many aquatic species decline or become locally extinct as their benthic habitat is lost during stream droughts, but less is known about the potential 'winners': those terrestrial species that may exploit emerging niches in drying riverbeds. In particular, we do not know how these transient ecotones will respond as droughts become more extreme in the future. To find out we used a large-scale, long-term mesocosm experiment spanning a wide gradient of drought intensity, from permanent flows to full streambed dewatering, and analysed terrestrial invertebrate community assembly after 1 year. Droughts that caused stream fragmentation gave rise to the most diverse terrestrial invertebrate assemblages, including 10 species with UK conservation designations, and high species turnover between experimental channels. Droughts that caused streambed dewatering produced lower terrestrial invertebrate richness, suggesting that the persistence of instream pools may benefit these taxa as well as aquatic biota. Particularly intense droughts may therefore yield relatively few 'winners' among either aquatic or terrestrial species, indicating that the threat to riverine biodiversity from future drought intensification could be more pervasive than widely acknowledged.
- Published
- 2023
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21. L-band radar quantifies major disturbance of birds by fireworks in an urban area.
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Wayman JP, Atkinson G, Jahangir M, White D, Matthews TJ, Antoniou M, Reynolds SJ, and Sadler JP
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- Animals, Animals, Wild, Birds, Cities, Radar, Body Fluids
- Abstract
Fireworks and other pyrotechnics are acknowledged as sources of disturbance to wildlife, with evidence that many species react adversely to their sight and sound at discharge. However, how firework releases impact wildlife within a city landscape is poorly understood. Here, we explore the effect of fireworks on urban birds using an L-band staring radar (90-degree sector out to a 5 km range) to capture bird activity derived from flight tracks (i.e. 3D visualisation of individual flying birds built from radar detections) within the city of Birmingham, UK. Comparing the tracks between baseline periods with no fireworks and periods where fireworks are commonly discharged using a null model indicated that birds flew at higher elevations during firework periods (standardised effect sizes of 17.11, 26.54 and 5.83, for Diwali, Bonfire Night, and New Year's Eve, respectively). Birds also flew in more significant numbers (standardised effect sizes of 23.41, 7.98 and 7.19 for Diwali, Bonfire Night, and New Year's Eve, respectively). Therefore, bird activity was elevated during firework events at a time of night when many would otherwise be roosting. Such disturbance may have implications for avian biology since large public firework events occur at colder times of the year in the UK when birds have elevated thermoregulatory costs., (© 2023. The Author(s).)
- Published
- 2023
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22. Evolution: The rise and fall of island dwarfs and giants.
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Matthews TJ
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- Animals, Geography, Body Size, Islands, Biological Evolution, Mammals
- Abstract
Islands are arenas for a range of striking evolutionary phenomena, including the island rule - the tendency for larger animals to shrink and smaller animals to enlarge. A new study of insular mammals finds such body size shifts predispose these evolutionary marvels to greater extinction risk., Competing Interests: Declaration of interests The author declares no competing interests., (Copyright © 2023 Elsevier Inc. All rights reserved.)
- Published
- 2023
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23. A global analysis of avian island diversity-area relationships in the Anthropocene.
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Matthews TJ, Wayman JP, Whittaker RJ, Cardoso P, Hume JP, Sayol F, Proios K, Martin TE, Baiser B, Borges PAV, Kubota Y, Dos Anjos L, Tobias JA, Soares FC, Si X, Ding P, Mendenhall CD, Sin YCK, Rheindt FE, Triantis KA, Guilhaumon F, Watson DM, Brotons L, Battisti C, Chu O, and Rigal F
- Subjects
- Animals, Phylogeny, Islands, Ecosystem, Biodiversity, Birds
- Abstract
Research on island species-area relationships (ISAR) has expanded to incorporate functional (IFDAR) and phylogenetic (IPDAR) diversity. However, relative to the ISAR, we know little about IFDARs and IPDARs, and lack synthetic global analyses of variation in form of these three categories of island diversity-area relationship (IDAR). Here, we undertake the first comparative evaluation of IDARs at the global scale using 51 avian archipelagic data sets representing true and habitat islands. Using null models, we explore how richness-corrected functional and phylogenetic diversity scale with island area. We also provide the largest global assessment of the impacts of species introductions and extinctions on the IDAR. Results show that increasing richness with area is the primary driver of the (non-richness corrected) IPDAR and IFDAR for many data sets. However, for several archipelagos, richness-corrected functional and phylogenetic diversity changes linearly with island area, suggesting that the dominant community assembly processes shift along the island area gradient. We also find that archipelagos with the steepest ISARs exhibit the biggest differences in slope between IDARs, indicating increased functional and phylogenetic redundancy on larger islands in these archipelagos. In several cases introduced species seem to have 're-calibrated' the IDARs such that they resemble the historic period prior to recent extinctions., (© 2023 The Authors. Ecology Letters published by John Wiley & Sons Ltd.)
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- 2023
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24. Long-term changes in macroinvertebrate communities across high-latitude streams.
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Milner AM, Loza Vega EM, Matthews TJ, Conn SC, and Windsor FM
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- Animals, Rivers chemistry, Temperature, Alaska, Invertebrates physiology, Ecosystem
- Abstract
Long-term records of benthic macroinvertebrates in high-latitude streams are essential for understanding climatic changes, including extreme events (e.g. floods). Data extending over multiple decades are typically scarce. Here, we investigated macroinvertebrate community structural change (including alpha and beta diversity and gain and loss of species) over 22 years (1994-2016) in 10 stream systems across Denali National Park (Alaska, USA) in relation to climatological and meteorological drivers (e.g. air temperature, snowpack depth, precipitation). We hypothesised that increases in air temperature and reduced snowpack depth, due to climatic change, would reduce beta and gamma diversity but increase alpha diversity. Findings showed temporal trends in alpha diversity were variable across streams, with oscillating patterns in many snowmelt- and rainfall runoff-fed streams linked to climatic variation (temperature and precipitation), but increased over time in several streams supported by a mixture of water sources, including more stable groundwater-fed streams. Beta-diversity over the time series was highly variable, yet marked transitions were observed in response to extreme snowpack accumulation (1999-2000), where species loss drove turnover. Gamma diversity did not significantly increase or decrease over time. Investigating trends in individual taxa, several taxa were lost and gained during a relative constrained time period (2000-2006), likely in response to climatic variability and significant shifts in instream environmental conditions. Findings demonstrate the importance of long-term biological studies in stream ecosystems and highlight the vulnerability of high-latitude streams to climate change., (© 2023 The Authors. Global Change Biology published by John Wiley & Sons Ltd.)
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- 2023
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25. Environmental drivers and spatial scaling of species abundance distributions in Palaearctic grassland vegetation.
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Ulrich W, Matthews TJ, Biurrun I, Campos JA, Czortek P, Dembicz I, Essl F, Filibeck G, Del Galdo GG, Güler B, Naqinezhad A, Török P, and Dengler J
- Subjects
- Biodiversity, Biota, Soil, Ecosystem, Grassland
- Abstract
Species abundance distributions (SADs) link species richness with species abundances and are an important tool in the quantitative analysis of ecological communities. Niche-based and sample-based SAD models predict different spatial scaling properties of SAD parameters. However, empirical research on SAD scaling properties is largely missing. Here we extracted percentage cover values of all occurring vascular plants as proxies of their abundance in 1725 10-m
2 plots from the GrassPlot database, covering 47 regional data sets of 19 different grasslands and other open vegetation types of the Palaearctic biogeographic realm. For each plot, we fitted the Weibull distribution, a model that is able to effectively mimic other distributions like the log-series and lognormal, to the species-log abundance rank order distribution. We calculated the skewness and kurtosis of the empirical distributions and linked these moments, along with the shape and scale parameters of the Weibull distribution, to plot climatic and soil characteristics. The Weibull distribution provided excellent fits to grassland plant communities and identified four basic types of communities characterized by different degrees of dominance. Shape and scale parameter values of local communities on poorer soils were largely in accordance with log-series distributions. Proportions of subdominant species tended to be lower than predicted by the standard lognormal SAD. Successive accumulation of plots of the same vegetation type yielded nonlinear spatial scaling of SAD moments and Weibull parameters. This scaling was largely independent of environmental correlates and geographic plot position. Our findings caution against simple generalizations about the mechanisms that generate SADs. We argue that in grasslands, lognormal-type SADs tend to prevail within a wider range of environmental conditions, including more extreme habitats such as arid environments. In contrast, log-series distributions are mainly restricted to comparatively species-rich communities on humid and fertile soils., (© 2022 The Authors. Ecology published by Wiley Periodicals LLC on behalf of The Ecological Society of America.)- Published
- 2022
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26. AVONET: morphological, ecological and geographical data for all birds.
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Tobias JA, Sheard C, Pigot AL, Devenish AJM, Yang J, Sayol F, Neate-Clegg MHC, Alioravainen N, Weeks TL, Barber RA, Walkden PA, MacGregor HEA, Jones SEI, Vincent C, Phillips AG, Marples NM, Montaño-Centellas FA, Leandro-Silva V, Claramunt S, Darski B, Freeman BG, Bregman TP, Cooney CR, Hughes EC, Capp EJR, Varley ZK, Friedman NR, Korntheuer H, Corrales-Vargas A, Trisos CH, Weeks BC, Hanz DM, Töpfer T, Bravo GA, Remeš V, Nowak L, Carneiro LS, Moncada R AJ, Matysioková B, Baldassarre DT, Martínez-Salinas A, Wolfe JD, Chapman PM, Daly BG, Sorensen MC, Neu A, Ford MA, Mayhew RJ, Fabio Silveira L, Kelly DJ, Annorbah NND, Pollock HS, Grabowska-Zhang AM, McEntee JP, Carlos T Gonzalez J, Meneses CG, Muñoz MC, Powell LL, Jamie GA, Matthews TJ, Johnson O, Brito GRR, Zyskowski K, Crates R, Harvey MG, Jurado Zevallos M, Hosner PA, Bradfer-Lawrence T, Maley JM, Stiles FG, Lima HS, Provost KL, Chibesa M, Mashao M, Howard JT, Mlamba E, Chua MAH, Li B, Gómez MI, García NC, Päckert M, Fuchs J, Ali JR, Derryberry EP, Carlson ML, Urriza RC, Brzeski KE, Prawiradilaga DM, Rayner MJ, Miller ET, Bowie RCK, Lafontaine RM, Scofield RP, Lou Y, Somarathna L, Lepage D, Illif M, Neuschulz EL, Templin M, Dehling DM, Cooper JC, Pauwels OSG, Analuddin K, Fjeldså J, Seddon N, Sweet PR, DeClerck FAJ, Naka LN, Brawn JD, Aleixo A, Böhning-Gaese K, Rahbek C, Fritz SA, Thomas GH, and Schleuning M
- Subjects
- Animals, Biodiversity, Biological Evolution, Humans, Phylogeny, Birds, Ecosystem
- Abstract
Functional traits offer a rich quantitative framework for developing and testing theories in evolutionary biology, ecology and ecosystem science. However, the potential of functional traits to drive theoretical advances and refine models of global change can only be fully realised when species-level information is complete. Here we present the AVONET dataset containing comprehensive functional trait data for all birds, including six ecological variables, 11 continuous morphological traits, and information on range size and location. Raw morphological measurements are presented from 90,020 individuals of 11,009 extant bird species sampled from 181 countries. These data are also summarised as species averages in three taxonomic formats, allowing integration with a global phylogeny, geographical range maps, IUCN Red List data and the eBird citizen science database. The AVONET dataset provides the most detailed picture of continuous trait variation for any major radiation of organisms, offering a global template for testing hypotheses and exploring the evolutionary origins, structure and functioning of biodiversity., (© 2022 The Authors. Ecology Letters published by John Wiley & Sons Ltd.)
- Published
- 2022
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27. Island biogeography.
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Matthews TJ and Triantis K
- Subjects
- Humans, Islands, Biodiversity, Ecology
- Abstract
Islands have fascinated biologists since the days of Charles Darwin and Alfred Russel Wallace and before, providing the inspiration for substantial theoretical development that has advanced our understanding of global biodiversity patterns and the mechanisms that underpin them. As such, they are often termed 'natural laboratories', providing the ideal setting to study the interface between ecology, evolution and conservation. Part of this fascination no-doubt arises from islands harboring a disproportionate amount of global biodiversity given the amount of land-mass they occupy (roughly 15-20% of global terrestrial species present in just 3.5% of global land), including large numbers of endemic forms not found anywhere else. Interestingly, more than 25% of human languages, many of which are also threatened with extinction, are also to be found on islands. In this primer, we provide an overview of the field of island biogeography, splitting it into three main sections. First, we explore some of the reasons that make islands, and the species that have evolved on them, unique and scientifically rewarding study systems for ecologists and biogeographers. Second, we delve into the key island biogeography works in order to provide an introductory summary of some of the main theoretical models developed to explain species diversity patterns on islands. Unfortunately, as well as representing captivating environments to study, islands are also highly threatened systems. As such, we end with an overview of the drivers and impacts of anthropogenic environmental change on islands, providing examples of some of the extraordinary island species that humans have driven extinct., (Copyright © 2021 Elsevier Inc. All rights reserved.)
- Published
- 2021
- Full Text
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28. Optical coherence tomography: current and future clinical applications in otology.
- Author
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Matthews TJ and Adamson R
- Subjects
- Humans, Ear Diseases diagnosis, Ear Diseases therapy, Tomography, Optical Coherence
- Abstract
Purpose of Review: This article reviews literature on the use of optical coherence tomography (OCT) in otology and provides the reader with a timely update on its current clinical and research applications. The discussion focuses on the principles of OCT, the use of the technology for the diagnosis of middle ear disease and for the delineation of in-vivo cochlear microarchitecture and function., Recent Findings: Recent advances in OCT include the measurement of structural and vibratory properties of the tympanic membrane, ossicles and inner ear in healthy and diseased states. Accurate, noninvasive diagnosis of middle ear disease, such as otosclerosis and acute otitis media using OCT, has been validated in clinical studies, whereas inner ear OCT imaging remains at the preclinical stage. The development of recent microscopic, otoscopic and endoscopic systems to address clinical and research problems is reviewed., Summary: OCT is a real-time, noninvasive, nonionizing, point-of-care imaging modality capable of imaging ear structures in vivo. Although current clinical systems are mainly focused on middle ear imaging, OCT has also been shown to have the ability to identify inner ear disease, an exciting possibility that will become increasingly relevant with the advent of targeted inner ear therapies.
- Published
- 2020
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29. Biodiversity theory backed by island bird data.
- Author
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Triantis KA and Matthews TJ
- Subjects
- Animals, Islands, Biodiversity, Birds
- Published
- 2020
- Full Text
- View/download PDF
30. A global model of island species-area relationships.
- Author
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Matthews TJ, Rigal F, Triantis KA, and Whittaker RJ
- Subjects
- Animals, Geography, Models, Theoretical, Biodiversity, Islands
- Abstract
The increase in species richness with island area (ISAR) is a well-established global pattern, commonly described by the power model, the parameters of which are hypothesized to vary with system isolation and to be indicative of ecological process regimes. We tested a structural equation model of ISAR parameter variation as a function of taxon, isolation, and archipelago configuration, using a globally distributed dataset of 151 ISARs encompassing a range of taxa and archipelago types. The resulting models revealed a negative relationship between ISAR intercept and slope as a function of archipelago species richness, in turn shaped by taxon differences and by the amount and disposition of archipelago area. These results suggest that local-scale (intra-archipelago) processes have a substantial role in determining ISAR form, obscuring the diversity patterns predicted by island theory as a function of archipelago isolation. These findings have implications for the use and interpretation of ISARs as a tool within biogeography, ecology, and conservation., Competing Interests: The authors declare no conflict of interest.
- Published
- 2019
- Full Text
- View/download PDF
31. A season for all things: Phenological imprints in Wikipedia usage and their relevance to conservation.
- Author
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Mittermeier JC, Roll U, Matthews TJ, and Grenyer R
- Subjects
- Animals, Biodiversity, Humans, Insecta, Language, Magnoliopsida, Plants, Seasons, Conservation of Natural Resources statistics & numerical data
- Abstract
Phenology plays an important role in many human-nature interactions, but these seasonal patterns are often overlooked in conservation. Here, we provide the first broad exploration of seasonal patterns of interest in nature across many species and cultures. Using data from Wikipedia, a large online encyclopedia, we analyzed 2.33 billion pageviews to articles for 31,751 species across 245 languages. We show that seasonality plays an important role in how and when people interact with plants and animals online. In total, over 25% of species in our data set exhibited a seasonal pattern in at least one of their language-edition pages, and seasonality is significantly more prevalent in pages for plants and animals than it is in a random selection of Wikipedia articles. Pageview seasonality varies across taxonomic clades in ways that reflect observable patterns in phenology, with groups such as insects and flowering plants having higher seasonality than mammals. Differences between Wikipedia language editions are significant; pages in languages spoken at higher latitudes exhibit greater seasonality overall, and species seldom show the same pattern across multiple language editions. These results have relevance to conservation policy formulation and to improving our understanding of what drives human interest in biodiversity., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2019
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32. Educational Attainment of Mothers Aged 25 and Over: United States, 2017.
- Author
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Matthews TJ and Hamilton BE
- Subjects
- Adult, Ethnicity, Female, Humans, Parity, Pregnancy, United States, Vital Statistics, Educational Status, Maternal Age, Mothers statistics & numerical data
- Abstract
Maternal education has been shown to be associated with the number of children a woman has during her childbearing years, as well as maternal and infant health (1-5). Using 2017 national birth certificate data, this report describes educational attainment of mothers aged 25 and over, overall and by race and Hispanic origin and state, and the mean numbers of live births by mothers' educational attainment., (All material appearing in this report is in the public domain and may be reproduced or copied without permission; citation as to source, however, is appreciated.)
- Published
- 2019
33. Total Fertility Rates by State and Race and Hispanic Origin: United States, 2017.
- Author
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Matthews TJ and Hamilton BE
- Subjects
- Adolescent, Adult, Birth Certificates, Child, Female, Humans, Infant, Newborn, Middle Aged, Pregnancy, United States epidemiology, Young Adult, Birth Rate ethnology, Birth Rate trends, Hispanic or Latino statistics & numerical data, Racial Groups statistics & numerical data, Residence Characteristics statistics & numerical data
- Abstract
Objectives-This report presents 2017 total fertility rates by state of residence and race and Hispanic origin of mother for the United States. Methods-Data are from birth certificates of the 50 states and the District of Columbia. Total fertility rates, the expected number of lifetime births per 1,000 women given current birth rates by age, are shown by state for all births, and for non-Hispanic single-race white, non-Hispanic single-race black, and Hispanic women for 2017. Results-Total fertility rates varied by state for each race and Hispanic-origin group. In 2017, South Dakota (2,227.5) had the highest total fertility rate of the 50 states and the District of Columbia; the District of Columbia had the lowest (1,421.0). For non-Hispanic white women, the highest total fertility rate was in Utah (2,099.5) and the lowest in the District of Columbia (1,012.0). Among non-Hispanic black women, the highest total fertility rate was in Maine (4,003.5) and the lowest in Wyoming (1,146.0) along with California (1,503.5), Connecticut (1,575.5), Montana (1,641.0), New Mexico (1,651.0), New York (1,574.5), Rhode Island (1,594.0), and West Virginia (1,579.5). For Hispanic women, the highest total fertility rate was in Alabama (3,085.0) and the lowest in Vermont (1,200.5) and Maine (1,281.5)., (All material appearing in this report is in the public domain and may be reproduced or copied without permission; citation as to source, however, is appreciated.)
- Published
- 2019
34. Extreme drought pushes stream invertebrate communities over functional thresholds.
- Author
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Aspin TWH, Khamis K, Matthews TJ, Milner AM, O'Callaghan MJ, Trimmer M, Woodward G, and Ledger ME
- Subjects
- Animals, Ecosystem, Models, Biological, Rivers, Biota physiology, Climate Change, Droughts, Invertebrates physiology
- Abstract
Functional traits are increasingly being used to predict extinction risks and range shifts under long-term climate change scenarios, but have rarely been used to study vulnerability to extreme climatic events, such as supraseasonal droughts. In streams, drought intensification can cross thresholds of habitat loss, where marginal changes in environmental conditions trigger disproportionate biotic responses. However, these thresholds have been studied only from a structural perspective, and the existence of functional nonlinearity remains unknown. We explored trends in invertebrate community functional traits along a gradient of drought intensity, simulated over 18 months, using mesocosms analogous to lowland headwater streams. We modelled the responses of 16 traits based on a priori predictions of trait filtering by drought, and also examined the responses of trait profile groups (TPGs) identified via hierarchical cluster analysis. As responses to drought intensification were both linear and nonlinear, generalized additive models (GAMs) were chosen to model response curves, with the slopes of fitted splines used to detect functional thresholds during drought. Drought triggered significant responses in 12 (75%) of the a priori-selected traits. Behavioural traits describing movement (dispersal, locomotion) and diet were sensitive to moderate-intensity drought, as channels fragmented into isolated pools. By comparison, morphological and physiological traits showed little response until surface water was lost, at which point we observed sudden shifts in body size, respiration mode and thermal tolerance. Responses varied widely among TPGs, ranging from population collapses of non-aerial dispersers as channels fragmented to irruptions of small, eurythermic dietary generalists upon extreme dewatering. Our study demonstrates for the first time that relatively small changes in drought intensity can trigger disproportionately large functional shifts in stream communities, suggesting that traits-based approaches could be particularly useful for diagnosing catastrophic ecological responses to global change., (© 2018 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.)
- Published
- 2019
- Full Text
- View/download PDF
35. Infant Mortality by Age at Death in the United States, 2016.
- Author
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Ely DM, Driscoll AK, and Matthews TJ
- Subjects
- Humans, Infant, Infant, Newborn, Black or African American, Cause of Death, Congenital Abnormalities epidemiology, Hispanic or Latino, Indians, North American, Infant, Low Birth Weight, Maternal Age, Perinatal Mortality trends, Sudden Infant Death epidemiology, United States epidemiology, White People, Female, Infant Mortality trends, Racial Groups statistics & numerical data
- Abstract
Infant mortality is an important public health measure in the United States and other countries (1-3). The United States' infant mortality rate started to decline in 2007 (the most recent high), but has remained relatively unchanged in recent years (4,5). Previous research shows differences in infant mortality rates by age at death (i.e., neonatal, or deaths to infants aged 0-27 days, and postneonatal, or deaths to infants aged 28-364 days), age and race and Hispanic origin of the mother, and leading causes of death (4-6). This report examines infant mortality rates for the United States by age at death in 2016, by maternal age and race and Hispanic origin, and for the five leading causes of neonatal and postneonatal mortality., (All material appearing in this report is in the public domain and may be reproduced or copied without permission; citation as to source, however, is appreciated.)
- Published
- 2018
36. An assessment of health, social, communication, and daily living skills of adults with Down syndrome.
- Author
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Matthews TJ, Allain DC, Matthews AL, Mitchell A, Santoro SL, and Cohen L
- Subjects
- Adult, Aged, Caregivers, Communication, Female, Health Status, Humans, Male, Middle Aged, Pilot Projects, Surveys and Questionnaires, Activities of Daily Living, Down Syndrome etiology, Social Behavior
- Abstract
Adults with Down syndrome (DS) are surviving longer, yet data delineating life skills are lacking. As providers are encouraged to provide a "balanced" description of DS to family members/caregivers, more quantitative data are required to accurately describe the abilities and potential of adults with DS. This study assessed health, social, communication, and daily living skills of adults with DS to describe the range of abilities and to show how increasing age contributes to functional abilities. Caregivers of an adult with DS 20 years of age or older participated in an online questionnaire. Descriptive statistics and scores from scales assessed relationships between the number of health issues reported and functional abilities, and how the abilities changed as age increased. Of 188 participants, 157 completed the survey with partial results included. Communication, independence, and social activity scores were compared to the number of congenital and non-congenital health issues reported. Linear regression results showed those with more health issues were significantly less likely to be independent and social. However, only current health issues affected communication skills. No significant correlation occurred between the number of congenital abnormalities and scores for independence/life skills as an adult. T-test by age group found decreasing abilities after 40 years of age. In conclusion, quantitative data and information from this study is beneficial for providers in order to describe the potential for an individual with DS and to assist caregivers to plan accordingly for the future of their adult with DS., (© 2018 Wiley Periodicals, Inc.)
- Published
- 2018
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37. A comparative analysis of terrestrial arthropod assemblages from a relict forest unveils historical extinctions and colonization differences between two oceanic islands.
- Author
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Boieiro M, Matthews TJ, Rego C, Crespo L, Aguiar CAS, Cardoso P, Rigal F, Silva I, Pereira F, Borges PAV, and Serrano ARM
- Subjects
- Animals, Biodiversity, Lauraceae, Portugal, Coleoptera, Forests, Islands, Spiders
- Abstract
During the last few centuries oceanic island biodiversity has been drastically modified by human-mediated activities. These changes have led to the increased homogenization of island biota and to a high number of extinctions lending support to the recognition of oceanic islands as major threatspots worldwide. Here, we investigate the impact of habitat changes on the spider and ground beetle assemblages of the native forests of Madeira (Madeira archipelago) and Terceira (Azores archipelago) and evaluate its effects on the relative contribution of rare endemics and introduced species to island biodiversity patterns. We found that the native laurel forest of Madeira supported higher species richness of spiders and ground beetles compared with Terceira, including a much larger proportion of indigenous species, particularly endemics. In Terceira, introduced species are well-represented in both terrestrial arthropod taxa and seem to thrive in native forests as shown by the analysis of species abundance distributions (SAD) and occupancy frequency distributions (OFD). Low abundance range-restricted species in Terceira are mostly introduced species dispersing from neighbouring man-made habitats while in Madeira a large number of true rare endemic species can still be found in the native laurel forest. Further, our comparative analysis shows striking differences in species richness and composition that are due to the geographical and geological particularities of the two islands, but also seem to reflect the differences in the severity of human-mediated impacts between them. The high proportion of introduced species, the virtual absence of rare native species and the finding that the SADs and OFDs of introduced species match the pattern of native species in Terceira suggest the role of man as an important driver of species diversity in oceanic islands and add evidence for an extensive and severe human-induced species loss in the native forests of Terceira.
- Published
- 2018
- Full Text
- View/download PDF
38. Declines in Births to Females Aged 10-14 in the United States, 2000-2016.
- Author
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Matthews TJ and Hamilton BE
- Subjects
- Adolescent, Birth Rate ethnology, Child, Female, History, 21st Century, Humans, Pregnancy, United States epidemiology, Birth Rate trends, Pregnancy in Adolescence statistics & numerical data
- Abstract
The birth rate for teen mothers aged 15-19 declined 57% from 2000 through 2016. During this time, the rate for young adolescent mothers aged 10-14 also declined. Childbearing by very young mothers is a matter of public concern because of the elevated health risks for these mothers and their infants and the socioeconomic consequences. This report describes recent trends and variations in births to young mothers aged 10-14 by race and Hispanic origin and state., (All material appearing in this report is in the public domain and may be reproduced or copied without permission; citation as to source, however, is appreciated.)
- Published
- 2018
39. State Variations in Infant Mortality by Race and Hispanic Origin of Mother, 2013-2015.
- Author
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Matthews TJ, Ely DM, and Driscoll AK
- Subjects
- Black or African American statistics & numerical data, Hispanic or Latino statistics & numerical data, Humans, Infant, Mothers, United States epidemiology, White People statistics & numerical data, Infant Mortality ethnology, Racial Groups statistics & numerical data, Residence Characteristics statistics & numerical data
- Abstract
Infant mortality has long been a basic measure of public health for countries around the world (1–3). While the overall infant mortality rate in the United States is lower than a decade ago, declining 14% from 6.86 infant deaths per 1,000 live births in 2005, a recent high, to 5.90 in 2015, the rate in 2015 was not statistically different from that in 2014 (5.82) (4–6). The variability in infant mortality rates by state and by race and Hispanic origin continues to receive attention (7,8). This report uses linked birth and infant death data from 2013 through 2015 to describe infant mortality rates in the United States by state, and for race and Hispanic-origin groups by state., (All material appearing in this report is in the public domain and may be reproduced or copied without permission; citation as to source, however, is appreciated.)
- Published
- 2018
40. Infant Mortality Rates in Rural and Urban Areas in the United States, 2014.
- Author
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Ely DM, Driscoll AK, and Matthews TJ
- Subjects
- Adult, Black or African American, Female, Hispanic or Latino, Humans, Infant, Infant Mortality ethnology, Infant, Newborn, Male, Maternal Age, Perinatal Mortality ethnology, Perinatal Mortality trends, Socioeconomic Factors, United States epidemiology, Young Adult, Infant Mortality trends, Rural Population statistics & numerical data, Urban Population statistics & numerical data
- Abstract
The infant mortality rate is often used as a measure of a country’s health because similar factors influence population health and infant mortality (1). Although infant mortality has declined in the United States, disparities still exist across geographic areas and demographic groups (2–4). Urbanization level, based on the number and concentration of people in a county, can impact health outcomes (3–9). Previous research indicates that infant mortality rates vary by urbanization level and also by maternal and infant characteristics (3–9). This report describes differences in infant mortality among rural, small and medium urban, and large urban counties in the United States by infant’s age at death, mother’s age, and race and Hispanic origin in 2014., (All material appearing in this report is in the public domain and may be reproduced or copied without permission; citation as to source, however, is appreciated.)
- Published
- 2017
41. Island biogeography: Taking the long view of nature's laboratories.
- Author
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Whittaker RJ, Fernández-Palacios JM, Matthews TJ, Borregaard MK, and Triantis KA
- Subjects
- Forests, Oceans and Seas, Phylogeography, Biodiversity, Islands
- Abstract
Islands provide classic model biological systems. We review how growing appreciation of geoenvironmental dynamics of marine islands has led to advances in island biogeographic theory accommodating both evolutionary and ecological phenomena. Recognition of distinct island geodynamics permits general models to be developed and modified to account for patterns of diversity, diversification, lineage development, and trait evolution within and across island archipelagos. Emergent patterns of diversity include predictable variation in island species-area relationships, progression rule colonization from older to younger land masses, and syndromes including loss of dispersability and secondary woodiness in herbaceous plant lineages. Further developments in Earth system science, molecular biology, and trait data for islands hold continued promise for unlocking many of the unresolved questions in evolutionary biology and biogeography., (Copyright © 2017, American Association for the Advancement of Science.)
- Published
- 2017
- Full Text
- View/download PDF
42. Attenuated Effects of Bile Acids on Glucose Metabolism and Insulin Sensitivity in a Male Mouse Model of Prenatal Undernutrition.
- Author
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Ma H, Sales VM, Wolf AR, Subramanian S, Matthews TJ, Chen M, Sharma A, Gall W, Kulik W, Cohen DE, Adachi Y, Griffin NW, Gordon JI, Patti ME, and Isganaitis E
- Subjects
- Animals, Bile Acids and Salts blood, Bile Acids and Salts chemistry, Blood Glucose, Diet, High-Fat, Female, Male, Mice, Mice, Inbred ICR, Pregnancy, Prenatal Exposure Delayed Effects, Ursodeoxycholic Acid administration & dosage, Ursodeoxycholic Acid pharmacology, Bile Acids and Salts pharmacology, Glucose metabolism, Insulin Resistance physiology, Malnutrition, Prenatal Nutritional Physiological Phenomena
- Abstract
Prenatal undernutrition and low birth weight are associated with risk of type 2 diabetes and obesity. Prenatal caloric restriction results in low birth weight, glucose intolerance, obesity, and reduced plasma bile acids (BAs) in offspring mice. Because BAs can regulate systemic metabolism and glucose homeostasis, we hypothesized that BA supplementation could prevent diet-induced obesity and glucose intolerance in this model of developmental programming. Pregnant dams were food restricted by 50% from gestational days 12.5 to 18.5. Offspring of both undernourished (UN) and control (C) dams given unrestricted diets were weaned to high-fat diets with or without supplementation with 0.25% w/w ursodeoxycholic acid (UDCA), yielding four experimental groups: C, UN, C + UDCA, and UN + UDCA. Glucose homeostasis, BA composition, liver and intestinal gene expression, and microbiota composition were analyzed in the four groups. Although UDCA supplementation ameliorated diet-induced obesity in C mice, there was no effect in UN mice. UDCA similarly lowered fasting insulin, and improved glucose tolerance, pyruvate tolerance, and liver steatosis in C, but not UN, animals. BA composition differed significantly, and liver and ileal expression of genes involved in BA metabolism (Cyp7b1, Shp) were differentially induced by UDCA in C vs UN animals. Bacterial taxa in fecal microbiota correlated with treatment groups and metabolic parameters. In conclusion, prenatal undernutrition alters responsiveness to the metabolic benefits of BA supplementation, with resistance to the weight-lowering and insulin-sensitizing effects of UDCA supplementation. Our findings suggest that BA metabolism may be a previously unrecognized contributor to developmentally programmed diabetes risk., (Copyright © 2017 Endocrine Society.)
- Published
- 2017
- Full Text
- View/download PDF
43. Oceanic island biogeography through the lens of the general dynamic model: assessment and prospect.
- Author
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Borregaard MK, Amorim IR, Borges PA, Cabral JS, Fernández-Palacios JM, Field R, Heaney LR, Kreft H, Matthews TJ, Olesen JM, Price J, Rigal F, Steinbauer MJ, Triantis KA, Valente L, Weigelt P, and Whittaker RJ
- Subjects
- Ecology, Geological Phenomena, Oceans and Seas, Phylogeny, Biodiversity, Islands, Models, Biological
- Abstract
The general dynamic model of oceanic island biogeography (GDM) has added a new dimension to theoretical island biogeography in recognizing that geological processes are key drivers of the evolutionary processes of diversification and extinction within remote islands. It provides a dynamic and essentially non-equilibrium framework generating novel predictions for emergent diversity properties of oceanic islands and archipelagos. Its publication in 2008 coincided with, and spurred on, renewed attention to the dynamics of remote islands. We review progress, both in testing the GDM's predictions and in developing and enhancing ecological-evolutionary understanding of oceanic island systems through the lens of the GDM. In particular, we focus on four main themes: (i) macroecological tests using a space-for-time rationale; (ii) extensions of theory to islands following different patterns of ontogeny; (iii) the implications of GDM dynamics for lineage diversification and trait evolution; and (iv) the potential for downscaling GDM dynamics to local-scale ecological patterns and processes within islands. We also consider the implications of the GDM for understanding patterns of non-native species diversity. We demonstrate the vitality of the field of island biogeography by identifying a range of potentially productive lines for future research., (© 2016 Cambridge Philosophical Society.)
- Published
- 2017
- Full Text
- View/download PDF
44. Severe Xerostomia Secondary to Anticholinergic Drug Therapy: Case Report.
- Author
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Brown RS, Rhodes BH, Siewe MS, and Matthews TJ
- Subjects
- Aged, 80 and over, Female, Humans, Cholinergic Antagonists adverse effects, Mandelic Acids adverse effects, Urinary Incontinence drug therapy, Xerostomia chemically induced
- Published
- 2017
45. Maternal obesity programs mitochondrial and lipid metabolism gene expression in infant umbilical vein endothelial cells.
- Author
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Costa SM, Isganaitis E, Matthews TJ, Hughes K, Daher G, Dreyfuss JM, da Silva GA, and Patti ME
- Subjects
- Adult, Cohort Studies, Female, Fetal Development, Gene Expression Profiling, Gene Expression Regulation, Humans, Infant, Inflammation physiopathology, Maternal Nutritional Physiological Phenomena physiology, Mitochondria metabolism, Obesity metabolism, Obesity pathology, Obesity prevention & control, Pregnancy, Pregnancy Complications metabolism, Pregnancy Complications pathology, Prenatal Exposure Delayed Effects, Human Umbilical Vein Endothelial Cells metabolism, Lipid Metabolism genetics, Mothers, Obesity genetics, Pregnancy Complications genetics, Umbilical Cord cytology
- Abstract
Background/objectives: Maternal obesity increases risk for childhood obesity, but molecular mechanisms are not well understood. We hypothesized that primary umbilical vein endothelial cells (HUVEC) from infants of overweight and obese mothers would harbor transcriptional patterns reflecting offspring obesity risk., Subjects/methods: In this observational cohort study, we recruited 13 lean (pre-pregnancy body mass index (BMI) <25.0 kg m
-2 ) and 24 overweight-obese ('ov-ob', BMI⩾25.0 kg m-2 ) women. We isolated primary HUVEC, and analyzed both gene expression (Primeview, Affymetrix) and cord blood levels of hormones and adipokines., Results: A total of 142 transcripts were differentially expressed in HUVEC from infants of overweight-obese mothers (false discovery rate, FDR<0.05). Pathway analysis revealed that genes involved in mitochondrial and lipid metabolism were negatively correlated with maternal BMI (FDR<0.05). To test whether these transcriptomic patterns were associated with distinct nutrient exposures in the setting of maternal obesity, we analyzed the cord blood lipidome and noted significant increases in the levels of total free fatty acids (lean: 95.5±37.1 μg ml-1 , ov-ob: 124.1±46.0 μg ml-1 , P=0.049), palmitate (lean: 34.5±12.7 μg ml-1 , ov-ob: 46.3±18.4 μg ml-1 , P=0.03) and stearate (lean: 20.8±8.2 μg ml-1 , ov-ob: 29.7±17.2 μg ml-1 , P=0.04), in infants of overweight-obese mothers., Conclusions: Prenatal exposure to maternal obesity alters HUVEC expression of genes involved in mitochondrial and lipid metabolism, potentially reflecting developmentally programmed differences in oxidative and lipid metabolism., Competing Interests: There are no conflicts of interest to disclose.- Published
- 2016
- Full Text
- View/download PDF
46. Elevated serum thyroglobulin levels at the time of ablative radioactive iodine therapy indicate a worse prognosis in thyroid cancer: an Australian retrospective cohort study.
- Author
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Matthews TJ, Chua E, Gargya A, Clark J, Gao K, and Elliott M
- Subjects
- Adult, Biomarkers, Tumor blood, Disease-Free Survival, Female, Humans, Male, Middle Aged, Neoplasm Recurrence, Local radiotherapy, Neoplasm Recurrence, Local surgery, Prognosis, Retrospective Studies, Risk, Thyroid Neoplasms blood, Thyroid Neoplasms diagnosis, Thyroid Neoplasms surgery, Thyroidectomy, Iodine Radioisotopes therapeutic use, Thyroglobulin blood, Thyroid Neoplasms radiotherapy
- Abstract
Background: Serum thyroglobulin is used as a surrogate marker for well-differentiated thyroid carcinoma recurrence. This study investigates whether thyroglobulin measured at the time of ablative radioactive iodine therapy predicts disease-free survival., Methods: A retrospective review was conducted of patients with well-differentiated thyroid carcinoma presenting from 1989 to 2010 at the Royal Prince Alfred Hospital, New South Wales, Australia. Disease-free survival of patients with a significantly elevated stimulated thyroglobulin level (27.5 µg/l or higher) at the time of ablative radioactive iodine therapy was compared to that of patients without a significantly elevated thyroglobulin level using univariate analysis., Results: Patients with a thyroglobulin level of 27.5 µg/l or higher had an increased relative risk of disease recurrence of 4.50 (95 per cent confidence interval = 1.35-15.04). If lateral neck dissection was required at the time of surgery, patients also had an increased relative risk of macroscopic disease recurrence of 4.94 (95 per cent confidence interval = 1.47-16.55)., Conclusion: An elevated thyroglobulin level of 27.5 µg/l or higher at the time of ablative radioactive iodine therapy is a prognostic indicator for macroscopic disease recurrence in well-differentiated thyroid carcinoma.
- Published
- 2016
- Full Text
- View/download PDF
47. Smoking Prevalence and Cessation Before and During Pregnancy: Data From the Birth Certificate, 2014.
- Author
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Curtin SC and Matthews TJ
- Subjects
- Adult, Demography, Female, Humans, Population Surveillance, Pregnancy, Prevalence, Risk Factors, Smoking ethnology, Smoking Cessation ethnology, United States epidemiology, Birth Certificates, Smoking epidemiology, Smoking Cessation statistics & numerical data
- Abstract
Objectives: This report presents findings for 2014 on maternal smoking prevalence and cessation before and during pregnancy as collected on the 2003 U.S. Standard Certificate of Live Birth, for a 46-state and District of Columbia reporting area, representing 95% of all births in the United States., Methods: Cigarette smoking and cessation rates 3 months before and during pregnancy are presented by maternal age; race and ethnicity; marital status; educational attainment; source of payment at delivery (private insurance, Medicaid, and self-pay); receipt of benefits from the Special Supplemental Nutrition Program for Women, Infants, and Children; prenatal care initiation; and jurisdiction., Results: About 1 in 10 women who gave birth in 2014 smoked during the 3 months before pregnancy (10.9%), and about one-quarter of these women (24.2%) did not smoke during pregnancy (i.e., quit before pregnancy). The smoking rate at any time during pregnancy was 8.4%, with 20.6% of women who smoked in the first or second trimesters quitting by the third trimester. Smoking during pregnancy was more prevalent for women aged 20–24 (13.0%) than for other ages, and by race and Hispanic origin, the highest rate was for non- Hispanic American Indian or Alaska Native women (18.0%). Smoking during pregnancy ranged from 1.8% in California to 27.1% in West Virginia. The highest smoking cessation rates before and during pregnancy were for women with the highest educational attainment, private insurance, and non-Hispanic Asian and Hispanic race and ethnicity. On average, women who continued to smoke during pregnancy smoked fewer cigarettes as the pregnancy progressed, from 13 per day before pregnancy to 9 per day by the third trimester., (All material appearing in this report is in the public domain and may be reproduced or copied without permission; citation as to source, however, is appreciated.)
- Published
- 2016
48. Births: Final Data for 2014.
- Author
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Hamilton BE, Martin JA, Osterman MJ, Curtin SC, and Matthews TJ
- Abstract
This report presents 2014 data on U.S. births according to a wide variety of characteristics. Data are presented for maternal age, live-birth order, race and Hispanic origin, marital status, attendant at birth, method of delivery, period of gestation, birthweight, and plurality. Birth and fertility rates are presented by age, live-birth order, race and Hispanic origin, and marital status. Selected data by mother's state of residence and birth rates by age and race of father also are shown. Trends in fertility patterns and maternal and infant characteristics are described and interpreted., (All material appearing in this report is in the public domain and may be reproduced or copied without permission; citation as to source, however, is appreciated.)
- Published
- 2015
49. Infant Mortality Statistics From the 2013 Period Linked Birth/Infant Death Data Set.
- Author
-
Matthews TJ, MacDorman MF, and Thoma ME
- Subjects
- Birth Weight, Female, Humans, Infant, Infant, Newborn, Male, Marital Status statistics & numerical data, Maternal Age, Multiple Birth Offspring statistics & numerical data, Premature Birth mortality, Risk Factors, Sex Distribution, United States epidemiology, Datasets as Topic, Infant Mortality ethnology, Infant Mortality trends
- Abstract
Objectives: This report presents 2013 period infant mortality statistics from the linked birth/infant death data set (linked file) by maternal and infant characteristics. The linked file differs from the mortality file, which is based entirely on death certificate data., Methods: Descriptive tabulations of data are presented and interpreted., Results: The U.S. infant mortality rate was 5.96 infant deaths per 1,000 live births in 2013, similar to the rate of 5.98 in 2012. The number of infant deaths was 23,446 in 2013, a decline of 208 infant deaths from 2012. From 2012 to 2013, infant mortality rates were stable for most race and Hispanic origin groups; declines were reported for two Hispanic subgroups: Cuban and Puerto Rican. Since 2005, the most recent high, the U.S. infant mortality rate has declined 13% (from 6.86), with declines in both neonatal and postneonatal mortality overall and for most groups. In 2013, infants born at 37–38 weeks of gestation (early term) had mortality rates that were 63% higher than for full-term (39–40 week) infants. For multiple births, the infant mortality rate was 25.84, 5 times the rate of 5.25 for singleton births. In 2013, 36% of infant deaths were due to preterm-related causes of death, and an additional 15% were due to causes grouped into the sudden unexpected infant death category., (All material appearing in this report is in the public domain and may be reproduced or copied without permission; citation as to source, however, is appreciated.)
- Published
- 2015
50. The ecological impact of city lighting scenarios: exploring gap crossing thresholds for urban bats.
- Author
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Hale JD, Fairbrass AJ, Matthews TJ, Davies G, and Sadler JP
- Abstract
As the global population urbanizes, dramatic changes are expected in city lighting and the urban form, which may threaten the functioning of urban ecosystems and the services they deliver. However, little is known about the ecological impact of lighting in different urban contexts. Movement is an important ecological process that can be disrupted by artificial lighting. We explored the impact of lighting on gap crossing for Pipistrellus pipistrellus, a species of bat (Chiroptera) common within UK cities. We aimed to determine whether the probability of crossing gaps in tree cover varied with crossing distance and lighting level, through stratified field surveys. We then used the resulting data on barrier thresholds to model the landscape resistance due to lighting across an entire city and explored the potential impact of scenarios for future changes to street lighting. The level of illumination required to create a barrier effect reduced as crossing distance increased. For those gaps where crossing was recorded, bats selected the darker parts of gaps. Heavily built parts of the case study city were associated with large and brightly lit gaps, and spatial models indicate movement would be highly restricted in these areas. Under a scenario for brighter street lighting, the area of accessible land cover was further reduced in heavily built parts of the city. We believe that this is the first study to demonstrate how lighting may create resistance to species movement throughout an entire city. That connectivity in urban areas is being disrupted for a relatively common species raises questions about the impacts on less tolerant groups and the resilience of bat communities in urban centres. However, this mechanistic approach raises the possibility that some ecological function could be restored in these areas through the strategic dimming of lighting and narrowing of gaps., (© 2015 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.)
- Published
- 2015
- Full Text
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