13 results on '"Massiot Granier, F."'
Search Results
2. No boundaries for whales interacting with fishing activities targeting Patagonian toothfish
- Author
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Gasco, N., Tixier, P., Massiot-Granier, F., Péron, C., Selles, J., Sarralde-Vizuete, R. (Roberto), and Soeffker, M.
- Subjects
Centro Oceanográfico de Canarias ,Pesquerías - Published
- 2020
3. Preliminary analysis of the Patagonian toothfish fishing data of the Del Cano Rise SIOFA
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Sarralde-Vizuete, Roberto, Massiot-Granier, F., Selles, J., Soeffker, M., Sarralde-Vizuete, Roberto, Massiot-Granier, F., Selles, J., and Soeffker, M.
- Published
- 2020
4. No boundaries for whales interacting with fishing activities targeting Patagonian toothfish (Dissostichus eleginoides)
- Author
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Gasco, N., Tixier, P., Massiot-Granier, F., Péron, C., and Sarralde-Vizuete, R. (Roberto)
- Subjects
Centro Oceanográfico de Canarias ,Pesquerías - Published
- 2019
5. Développement et application d'une méthode générique pour évaluer le potentiel exploratoire des espèces sous contrainte de changement climatique : focus sur la phase exploratoire pour les poissons migrateurs amphihalins
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Massiot Granier, F., Rougier, T., Lambert, P., Rosebery, J., Rochard, E., Lassalle, G., Ecosystèmes aquatiques et changements globaux (UR EABX), Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA), and IRSTEA BORDEAUX UR EABX FRA
- Subjects
fish ,climatic change ,migratory species ,CHANGEMENT CLIMATIQUE ,[SDE]Environmental Sciences ,ESPECE MIGRATRICE ,POISSON - Abstract
International audience; Climate change by altering spatio-temporal distributions of suitable habitats leads to modifications in a multitude of species ranges. In recent years, the ability of species to physically adjust to the changing climatic conditions is of growing concern. We developed a generic trait-based method to assess the ability of species to explore new suitable habitats under climate change. Anadromous fish populations of the northern Atlantic were chosen as a suitable application case due to their high variability in terms of migratory behavior and degree of philopatry. The calculation of an Exploratory Potential Index (EPI) relies on a formal framework and a participatory procedure adapted from the Analytical Hierarchy Process (AHP) theory. It combines independent relevant life-history traits and ecological attributes into a single numeric value and permit to gather expert opinion by decomposing a complex issue into a hierarchy of more easily comprehended sub-problems through pairwise comparison matrices. Straying, earliness of first maturity, body size at first maturity, Distance covered to access feeding grounds and the reproduction strategies were identified by the expert. Results allow to identify different dispersal strategies an support strong differences in the ability to explore potential suitable habitat among anadromous fish. Even though they have contrasted life cycles, Morone saxatalis, Acipenser oxyrinchus and Alosa mediocris outperformed most of the species, while other species as Acipenser brevirostrum demonstrated had the lowest scores. Broader applications of the EPI would help to identify regions acting as potential sources of migrants and thus of priority for conservation biologists and resources.
- Published
- 2016
6. A generic method to assess species exploratory potential under climate change
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Massiot Granier, F., Rougier, T., Lambert, P., Rosebery, J., Lassalle, G., Ecosystèmes aquatiques et changements globaux (UR EABX), Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA), and IRSTEA BORDEAUX UR EABX FRA
- Subjects
CLIMATIC CHANGE ,MIGRATION ,BIODIVERSITE ,EXPLORATION PHASE ,POPULATION DYNAMICS ,RANGE SHIFT ,FISH ,CHANGEMENT CLIMATIQUE ,[SDE]Environmental Sciences ,DYNAMIQUE DE POPULATION ,BIODIVERSITY ,PARTICIPATIVE METHOD ,COMPOSITE METRIC ,POISSON - Abstract
International audience; This poster was presented during the AFH conference in June 2015. It presents the methodology based on AHP developped. It aims to estimate an Exploratory Potential Index for anadromous fish of the north atlantic Ocean. It combines several independant variables and experts opinion in order to provide a single composite value.
- Published
- 2015
7. Effective use of ecosystem and biological knowledge in fisheries
- Author
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Rivot, E., Massiot-Granier, F., Pulkkinen, H., Chaput, C., Mäntyniemi, S., Pakarinen, T., Prévost, E., White, J., and Romakkaniemi, A.
- Subjects
ECOKNOWS - Abstract
The general aim of the ECOKNOWS project is to improve the use of biological knowledge in fisheries science and management. The lack of appropriate calculus methods and fear of statistical overparameterisation has limited biological reality in fisheries models. This reduces biological credibility perceived by many stakeholders. We solve this technical estimation problem by using up-to date methodology supporting more effective use of data. The models suggested will include important knowledge about biological processes and the applied statistical inference methods allow to integrate and update this knowledge in stock assessment. We will use the basic biological data (such as growth, maturity, fecundity, maximum age and recruitment data sets) to estimate general probabilistic dependencies in fish stock assessments. In particular, we will seek to improve the use of large existing biological and environmental databases, published papers and survey data sets provided by EU data collection regulations and stored by ICES and EU member countries. Bayesian inference will form the methodological backbone of the project and will enable realistic estimations of uncertainty. We develop a computational learning approach that builds on the extensive information present in FishBase (www.fishbase.org).The developed methodology will be of fundamental importance, especially for the implementation of the Ecosystem Approach to Fisheries Management. It has been a difficult challenge even for target species with long data series, and now the same challenge is given for new and poorly studied species. We will improve ways to find generic and understandable biological reference points, such as the required number of spawning times per fish, which also supports the management needs in the developing countries. ECOKNOWS applies decision analysis and bioeconomic methods to evaluate the validity and utility of improved information, helping to plan efficient EU data collection., North Atlantic (NA) stock assessments address the marine phase, estimating returns to home waters, with Pre-Fishery Abundance (PFA) estimated through raising of national (or regional) annual catches by exploitation rates and attributing unreported catch and natural mortality ranges in Monte Carlo simulations. Baltic stocks in contrast, are estimated through integrated Bayesian life cycle state-space models including riverine and sea phases (Michielsens et al., 2008). There is presently no interaction between the two methodologies.We detail the two approaches specifying similarities in biology, as a prerequisite to their harmonization for parallel inference and risk analysis, independent of scales, available data and management objectives. Through aggregations of scale and availability, assimilations of data differ. For the Baltic much is performed within the forecasting framework, and while aggregations in the NA case are disparate, finer scale details are available. In the Baltic a scale of “river” is used as the geographical unit, while in the NA, 3 geo-regions are treated independently, each operating at arbitrary regional scales. To harmonize NA and Baltic approaches, a multi-scale integrated life cycle model in a Hierarchical Bayesian Modelling (HBM) framework is proposed for the NA to capture inherent complexities from mixing of life cycle age and stage cohorts, which is currently not addressed. A stage-structured life cycle approach is proposed, incorporating freshwater and marine phase variability of life histories (survival and life history choices) and auto-regenerated cohort dynamics. This represents a large change in both the modelling and statistical inference framework.Key structural hypotheses and common informative prior distributions for modelling demographic processes, for both NA and Baltic models are developed. Together with the Bayesian methodology these form the core of the harmonization process. To harmonize modelling of the demographic process the following items are necessary: State-space representation of all life stages including those not directly observed to explicitly separate out modeling of the demographic and observation processes, so as the harmonization of the models for the core ecological process can be thought independently from the data availability. Age/stage-based demographic models to integrate biological and ecological knowledge of population dynamics, characterized by seaward migrations of smolts and spawning migration of adults back to freshwater, accommodating intra- and inter-population variability in life history traits. Probabilistic demographic transitions and between-years variability of certain parameters to capture both environmental and demographic stochasticity. Variable egg to juvenile density-dependent average survival, of classical survival functions. Common approach to forecast yearly variations of marine post-smolts survival., Funer: FP7-KBBE European Commission CORDIS
- Published
- 2013
8. Bayesian modelling of the dynamics of complex of salmon populations in the North Atlantic
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Massiot-Granier, F., Rivot, Etienne, Prévost, E., Chaput, G., Potter, T., Smith, G., White, J., Écologie et santé des écosystèmes (ESE), Institut National de la Recherche Agronomique (INRA)-AGROCAMPUS OUEST, and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
- Subjects
Atlantic salmon ,Hierachical Bayesian models ,Life Cycle model ,[SDV.SA.STP]Life Sciences [q-bio]/Agricultural sciences/Sciences and technics of fishery - Abstract
Bayesian modelling of the dynamics of complex of salmon populations in the North Atlantic
- Published
- 2012
9. La gestion au rendement maximal durable : quel schema de transition pour les pêcheries bretonnes ?
- Author
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Massiot-Granier, F., Henichart, L.M., Gascuel, Didier, Écologie et santé des écosystèmes (ESE), Institut National de la Recherche Agronomique (INRA)-AGROCAMPUS OUEST, and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
- Subjects
[SDV.SA.STP]Life Sciences [q-bio]/Agricultural sciences/Sciences and technics of fishery - Abstract
La gestion au rendement maximal durable : quel schema de transition pour les pêcheries bretonnes ?
- Published
- 2011
10. A bayesian observation error model for otolith reading : the case study of yellowfin tuna (Thunnus albacares) in the Indian Ocean
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Dortel, Emmanuelle, Massiot-Granier, F., Chassot, Emmanuel, Morize, Eric, Million, J., Hallier, Jean-Pierre, and Rivot, E.
- Subjects
MODELE ,THON ,CROISSANCE ,GESTION DE STOCK ,OTOLITHE ,ANALYSE DE DONNEES - Published
- 2011
11. Are we ready to track climate-driven shifts in marine species across international boundaries? - A global survey of scientific bottom trawl data.
- Author
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A Maureaud A, Frelat R, Pécuchet L, Shackell N, Mérigot B, Pinsky ML, Amador K, Anderson SC, Arkhipkin A, Auber A, Barri I, Bell RJ, Belmaker J, Beukhof E, Camara ML, Guevara-Carrasco R, Choi J, Christensen HT, Conner J, Cubillos LA, Diadhiou HD, Edelist D, Emblemsvåg M, Ernst B, Fairweather TP, Fock HO, Friedland KD, Garcia CB, Gascuel D, Gislason H, Goren M, Guitton J, Jouffre D, Hattab T, Hidalgo M, Kathena JN, Knuckey I, Kidé SO, Koen-Alonso M, Koopman M, Kulik V, León JP, Levitt-Barmats Y, Lindegren M, Llope M, Massiot-Granier F, Masski H, McLean M, Meissa B, Mérillet L, Mihneva V, Nunoo FKE, O'Driscoll R, O'Leary CA, Petrova E, Ramos JE, Refes W, Román-Marcote E, Siegstad H, Sobrino I, Sólmundsson J, Sonin O, Spies I, Steingrund P, Stephenson F, Stern N, Tserkova F, Tserpes G, Tzanatos E, van Rijn I, van Zwieten PAM, Vasilakopoulos P, Yepsen DV, Ziegler P, and T Thorson J
- Subjects
- Animals, Climate Change, Fishes, Surveys and Questionnaires, Ecosystem, Fisheries
- Abstract
Marine biota are redistributing at a rapid pace in response to climate change and shifting seascapes. While changes in fish populations and community structure threaten the sustainability of fisheries, our capacity to adapt by tracking and projecting marine species remains a challenge due to data discontinuities in biological observations, lack of data availability, and mismatch between data and real species distributions. To assess the extent of this challenge, we review the global status and accessibility of ongoing scientific bottom trawl surveys. In total, we gathered metadata for 283,925 samples from 95 surveys conducted regularly from 2001 to 2019. We identified that 59% of the metadata collected are not publicly available, highlighting that the availability of data is the most important challenge to assess species redistributions under global climate change. Given that the primary purpose of surveys is to provide independent data to inform stock assessment of commercially important populations, we further highlight that single surveys do not cover the full range of the main commercial demersal fish species. An average of 18 surveys is needed to cover at least 50% of species ranges, demonstrating the importance of combining multiple surveys to evaluate species range shifts. We assess the potential for combining surveys to track transboundary species redistributions and show that differences in sampling schemes and inconsistency in sampling can be overcome with spatio-temporal modeling to follow species density redistributions. In light of our global assessment, we establish a framework for improving the management and conservation of transboundary and migrating marine demersal species. We provide directions to improve data availability and encourage countries to share survey data, to assess species vulnerabilities, and to support management adaptation in a time of climate-driven ocean changes., (© 2020 The Authors. Global Change Biology published by John Wiley & Sons Ltd.)
- Published
- 2021
- Full Text
- View/download PDF
12. Comparing and synthesizing quantitative distribution models and qualitative vulnerability assessments to project marine species distributions under climate change.
- Author
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Allyn AJ, Alexander MA, Franklin BS, Massiot-Granier F, Pershing AJ, Scott JD, and Mills KE
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- Animals, Atlantic Ocean, Biomass, Ecosystem, Models, Biological, New England, Population Dynamics, Seasons, Animal Distribution, Climate Change, Fishes physiology
- Abstract
Species distribution shifts are a widely reported biological consequence of climate-driven warming across marine ecosystems, creating ecological and social challenges. To meet these challenges and inform management decisions, we need accurate projections of species distributions. Quantitative species distribution models (SDMs) are routinely used to make these projections, while qualitative climate change vulnerability assessments are becoming more common. We constructed SDMs, compared SDM projections to expectations from a qualitative expert climate change vulnerability assessment, and developed a novel approach for combining the two methods to project the distribution and relative biomass of 49 marine species in the Northeast Shelf Large Marine Ecosystem under a "business as usual" climate change scenario. A forecasting experiment using SDMs highlighted their ability to capture relative biomass patterns fairly well (mean Pearson's correlation coefficient between predicted and observed biomass = 0.24, range = 0-0.6) and pointed to areas needing improvement, including reducing prediction error and better capturing fine-scale spatial variability. SDM projections suggest the region will undergo considerable biological changes, especially in the Gulf of Maine, where commercially-important groundfish and traditional forage species are expected to decline as coastal fish species and warmer-water forage species historically found in the southern New England/Mid-Atlantic Bight area increase. The SDM projections only occasionally aligned with vulnerability assessment expectations, with agreement more common for species with adult mobility and population growth rates that showed low sensitivity to climate change. Although our blended approach tried to build from the strengths of each method, it had no noticeable improvement in predictive ability over SDMs. This work rigorously evaluates the predictive ability of SDMs, quantifies expected species distribution shifts under future climate conditions, and tests a new approach for integrating SDMs and vulnerability assessments to help address the complex challenges arising from climate-driven species distribution shifts., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2020
- Full Text
- View/download PDF
13. Accounting for age uncertainty in growth modeling, the case study of yellowfin tuna (Thunnus albacares) of the Indian Ocean.
- Author
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Dortel E, Massiot-Granier F, Rivot E, Million J, Hallier JP, Morize E, Munaron JM, Bousquet N, and Chassot E
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- Age Factors, Animals, Bayes Theorem, Ecological and Environmental Phenomena, Female, Indian Ocean, Male, Models, Statistical, Reproducibility of Results, Models, Biological, Tuna growth & development, Uncertainty
- Abstract
Age estimates, typically determined by counting periodic growth increments in calcified structures of vertebrates, are the basis of population dynamics models used for managing exploited or threatened species. In fisheries research, the use of otolith growth rings as an indicator of fish age has increased considerably in recent decades. However, otolith readings include various sources of uncertainty. Current ageing methods, which converts an average count of rings into age, only provide periodic age estimates in which the range of uncertainty is fully ignored. In this study, we describe a hierarchical model for estimating individual ages from repeated otolith readings. The model was developed within a Bayesian framework to explicitly represent the sources of uncertainty associated with age estimation, to allow for individual variations and to include knowledge on parameters from expertise. The performance of the proposed model was examined through simulations, and then it was coupled to a two-stanza somatic growth model to evaluate the impact of the age estimation method on the age composition of commercial fisheries catches. We illustrate our approach using the sagittal otoliths of yellowfin tuna of the Indian Ocean collected through large-scale mark-recapture experiments. The simulation performance suggested that the ageing error model was able to estimate the ageing biases and provide accurate age estimates, regardless of the age of the fish. Coupled with the growth model, this approach appeared suitable for modeling the growth of Indian Ocean yellowfin and is consistent with findings of previous studies. The simulations showed that the choice of the ageing method can strongly affect growth estimates with subsequent implications for age-structured data used as inputs for population models. Finally, our modeling approach revealed particularly useful to reflect uncertainty around age estimates into the process of growth estimation and it can be applied to any study relying on age estimation.
- Published
- 2013
- Full Text
- View/download PDF
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