650 results on '"Masoudi-Nejad, Ali"'
Search Results
2. Exploring ceRNA networks for key biomarkers in breast cancer subtypes and immune regulation
3. Food co-consumption network as a new approach to dietary pattern in non-alcoholic fatty liver disease
4. DrugRep-HeSiaGraph: when heterogenous siamese neural network meets knowledge graphs for drug repurposing
5. Deciphering the impact of microbial interactions on COPD exacerbation: An in-depth analysis of the lung microbiome
6. A deep learning-based framework for predicting survival-associated groups in colon cancer by integrating multi-omics and clinical data
7. Computational-based strategies to deal with liver injuries induced by the repurposed drugs against SARS-CoV-2
8. Heterogeneity and molecular landscape of melanoma: implications for targeted therapy
9. Insight into gene regulatory networks involved in sesame (Sesamum indicum L.) drought response
10. mRNA–miRNA bipartite networks reconstruction in different tissues of bladder cancer based on gene co-expression network analysis
11. Impact of 5HydroxyMethylCytosine (5hmC) on reverse/direct association of cell-cycle, apoptosis, and extracellular matrix pathways in gastrointestinal cancers
12. Drug repositioning in non-small cell lung cancer (NSCLC) using gene co-expression and drug–gene interaction networks analysis
13. Re-wiring and gene expression changes of AC025034.1 and ATP2B1 play complex roles in early-to-late breast cancer progression
14. Identifying common signatures and potential therapeutic biomarkers in COPD and lung cancer using miRNA-mRNA co-expression networks
15. Feature Selection and mRNA-miRNA bipartite Network Analysis for Biomarker Development and Drug Repurposing in Colon Cancer
16. Automated Plant Species Identification Using Leaf Shape-Based Classification Techniques: A Case Study on Iranian Maples
17. A multimodal deep learning-based drug repurposing approach for treatment of COVID-19
18. In silico design of novel aptamers utilizing a hybrid method of machine learning and genetic algorithm
19. Revealing transcriptional and post-transcriptional regulatory mechanisms of γ-glutamyl transferase and keratin isoforms as novel cooperative biomarkers in low-grade glioma and glioblastoma multiforme
20. Distinguishing drug/non-drug-like small molecules in drug discovery using deep belief network
21. RPINBASE: An online toolbox to extract features for predicting RNA-protein interactions
22. Introducing a panel for early detection of lung adenocarcinoma by using data integration of genomics, epigenomics, transcriptomics and proteomics
23. Using structural controllability in detecting effective immune system elements against cancer cells
24. Predictive genomics: A cancer hallmark network framework for predicting tumor clinical phenotypes using genome sequencing data
25. A machine learning method based on the genetic and world competitive contests algorithms for selecting genes or features in biological applications
26. Nodes with the highest control power play an important role at the final level of cooperation in directed networks
27. Identification of common microRNA between COPD and non-small cell lung cancer through pathway enrichment analysis
28. Systematic analysis of genes and diseases using PheWAS-Associated networks
29. DrugR+: A comprehensive relational database for drug repurposing, combination therapy, and replacement therapy
30. Disease global behavior: A systematic study of the human interactome network reveals conserved topological features among categories of diseases
31. Modeling and Analysis of Abnormality Detection in Biomolecular Nano-Networks
32. Reconstruction of the genome-scale co-expression network for the Hippo signaling pathway in colorectal cancer
33. Genome-wide DNA methylation profiling in ectopic and eutopic of endometrial tissues
34. Sequence-based 5-mers highly correlated to epigenetic modifications in genes interactions
35. Appropriate time to apply control input to complex dynamical systems
36. Synthetic repurposing of drugs against hypertension: a datamining method based on association rules and a novel discrete algorithm
37. DeepTraSynergy: Drug Combinations using Multi-modal Deep Learning with Transformers
38. Task modulates functional connectivity networks in free viewing behavior
39. A hybrid gene selection algorithm for microarray cancer classification using genetic algorithm and learning automata
40. Identification of Key Components in Colon Adenocarcinoma Using Transcriptome to Interactome Multilayer Framework
41. Genome-scale exploration of transcriptional regulation in the nisin Z producer Lactococcus lactis subsp. lactis IO-1
42. Identification of biomarkers in common chronic lung diseases by co-expression networks and drug-target interactions analysis
43. De Novo Assembly Algorithms
44. The Assembly of Sequencing Data
45. Emergence of Next-Generation Sequencing
46. Next-Generation Sequencing Methodologies
47. DrugRep-KG: Toward Learning a Unified Latent Space for Drug Repurposing Using Knowledge Graphs
48. Rewiring of miRNA-mRNA bipartite co-expression network as a novel way to understand the prostate cancer related players
49. CeFunMO: A centrality based method for discovering functional motifs with application in biological networks
50. Drug–target interaction prediction from PSSM based evolutionary information
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