109 results on '"Martire S"'
Search Results
2. Serum Neurofilaments are a reliable biomarker to early detect PML in Multiple Sclerosis patients
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Valentino, P, Malucchi, S, Bava, CI, Martire, S, Capobianco, M, Malentacchi, M, Sperli, F, Oggero, A, Di Sapio, A, and Bertolotto, A
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- 2023
- Full Text
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3. High‐throughput screen to identify and optimize NOT gate receptors for cell therapy.
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Martire, S., Wang, X., McElvain, M., Suryawanshi, V., Gill, T., DiAndreth, B., Lee, W., Riley, T. P., Xu, H., Netirojjanakul, C., and Kamb, A.
- Abstract
Logic‐gated engineered cells are an emerging therapeutic modality that can take advantage of molecular profiles to focus medical interventions on specific tissues in the body. However, the increased complexity of these engineered systems may pose a challenge for prediction and optimization of their behavior. Here we describe the design and testing of a flow cytometry‐based screening system to rapidly select functional inhibitory receptors from a pooled library of candidate constructs. In proof‐of‐concept experiments, this approach identifies inhibitory receptors that can operate as NOT gates when paired with activating receptors. The method may be used to generate large datasets to train machine learning models to better predict and optimize the function of logic‐gated cell therapeutics. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Exogenous Sonic Hedgehog Modulates the Pool of GABAergic Interneurons During Cerebellar Development
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De Luca, A., Parmigiani, E., Tosatto, G., Martire, S., Hoshino, M., Buffo, A., Leto, K., and Rossi, F.
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- 2015
- Full Text
- View/download PDF
5. WITHDRAWAL OF PALATABLE DIET REDUCES FEEDING WHILE ACUTE ACCESS IS MARKED BY HYPERPHAGIA IN THE RAT: 576 accepted poster
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Morris, M., South, T., Martire, S., and Westbrook, F.
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- 2012
6. Study of the NR 4A family gene expression in patients with multiple sclerosis treated with Fingolimod
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Montarolo, F., primary, Perga, S., additional, Martire, S., additional, Brescia, F., additional, Caldano, M., additional, Lo Re, M., additional, Panzica, G., additional, and Bertolotto, A., additional
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- 2018
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7. Hippocampal atrophy in people with memory deficits: results from the population-based IPREA study
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Ferrarini L, van Lew B, Reiber JH, Gandin C, Galluzzo L, Scafato E, FrisoniGB, Milles J, Pievani M, IPREA Working Group: Scafato E, Farchi G, Giampaoli S, Mariotti S, Ghirini S, Martire S, Di Pasquale L, Maggi S, Crepaldi G, Enzi G, Gallina P, Inzitari D, Baldereschi M, Di Carlo A, Frisoni GB, Galluzzi S, Gandolfo C, Conti M, Postacchini D, Cruciani G, Giuli C, Capurso A, Solfrizzi V, Panza F, Rengo F, ABETE, PASQUALE, Motta M, Negrini R, Forti P, Tabanelli P, Cocchi A, Zuccal G, Cacciatore F, Calabrese C, Sica G, Estraneo A, Foundation SM, Consoli D, Naso F, Torcasio G, Valentia V, Mecocci P, Rinaldi P, Serafini V, Senin U., Ferrarini, L, van Lew, B, Reiber, Jh, Gandin, C, Galluzzo, L, Scafato, E, Frisonigb, Milles, J, Pievani, M, IPREA Working Group: Scafato, E, Farchi, G, Giampaoli, S, Mariotti, S, Ghirini, S, Martire, S, Di Pasquale, L, Maggi, S, Crepaldi, G, Enzi, G, Gallina, P, Inzitari, D, Baldereschi, M, Di Carlo, A, Frisoni, Gb, Galluzzi, S, Gandolfo, C, Conti, M, Postacchini, D, Cruciani, G, Giuli, C, Capurso, A, Solfrizzi, V, Panza, F, Rengo, F, Abete, Pasquale, Motta, M, Negrini, R, Forti, P, Tabanelli, P, Cocchi, A, Zuccal, G, Cacciatore, F, Calabrese, C, Sica, G, Estraneo, A, Foundation, Sm, Consoli, D, Naso, F, Torcasio, G, Valentia, V, Mecocci, P, Rinaldi, P, Serafini, V, and Senin, U.
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medicine.medical_specialty ,education.field_of_study ,business.industry ,Population ,Not Otherwise Specified ,Hippocampus ,Audiology ,Hippocampal formation ,medicine.disease ,population-based ,memory ,Psychiatry and Mental health ,Clinical Psychology ,Atrophy ,hippocampal atrophy ,medicine ,Dementia ,Memory impairment ,Geriatrics and Gerontology ,Alzheimer's disease ,business ,education ,Gerontology ,MRI - Abstract
Background:Clinical studies have shown that hippocampal atrophy is present before dementia in people with memory deficits and can predict dementia development. The question remains whether this association holds in the general population. This is of interest for the possible use of hippocampal atrophy to screen population for preventive interventions. The aim of this study was to assess hippocampal volume and shape abnormalities in elderly adults with memory deficits in a cross-sectional population-based study.Methods:We included individuals participating in the Italian Project on the Epidemiology of Alzheimer Disease (IPREA) study: 75 cognitively normal individuals (HC), 31 individuals with memory deficits (MEM), and 31 individuals with memory deficits not otherwise specified (MEMnos). Hippocampal volumes and shape were extracted through manual tracing and the growing and adaptive meshes (GAMEs) shape-modeling algorithm. We investigated between-group differences in hippocampal volume and shape, and correlations with memory deficits.Results:In MEM participants, hippocampal volumes were significantly smaller than in HC and were mildly associated with worse memory scores. Memory-associated shape changes mapped to the anterior hippocampus. Shape-based analysis detected no significant difference between MEM and HC, while MEMnos showed shape changes in the posterior hippocampus compared with HC and MEM groups.Conclusions:These findings support the discriminant validity of hippocampal volumetry as a biomarker of memory impairment in the general population. The detection of shape changes in MEMnos but not in MEM participants suggests that shape-based biomarkers might lack sensitivity to detect Alzheimer's-like pathology in the general population.
- Published
- 2014
8. Anti-inflammatory genes associated with multiple sclerosis: A gene expression study
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Perga, S., Montarolo, F., Martire, S., Berchialla, P., Malucchi, S., and Bertolotto, A.
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- 2015
- Full Text
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9. Study of the NR4A family gene expression in patients with multiple sclerosis treated with Fingolimod.
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Montarolo, F., Perga, S., Martire, S., Brescia, F., Caldano, M., Lo Re, M., Panzica, G., and Bertolotto, A.
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GENE expression ,MULTIPLE sclerosis - Abstract
Background and purpose: Fingolimod is a drug approved for treatment of relapsing‐remitting multiple sclerosis (RRMS) that exerts its effects via sequestering lymphocytes within the lymph nodes. The drug, acting on the sphingosine‐1‐phosphate pathway, is involved in a plethora of processes and, to date, its mechanism of action is not completely understood. Recently, it has been demonstrated that Fingolimod increases the expression of transcription factor NR4A2 in murine brain. NR4A2 belongs to nuclear receptor family 4, group A (NR4A) along with NR4A1 and NR4A3. The role of NR4A2 in the pathogenesis of multiple sclerosis is already known and supported by its down‐regulation observed in blood obtained from patients with RRMS compared with healthy controls (HCs). It is notable that NR4A2 impairment is reversed in patients with RRMS during pregnancy, which represents a transitory state of immune tolerance, associated with reduced disease activity. An inverse correlation between NR4A2 gene expression levels and clinical parameters indicates that more aggressive forms of the disease are characterized by lower levels of NR4A2. Methods: Gene expression levels of NR4A in blood obtained from HCs, treatment‐naive (T0) and Fingolimod‐treated patients with RRMS were evaluated to determine their contribution to drug response. Results: Gene expression levels of NR4A were down‐regulated in T0 patients compared with HCs. Patients treated with Fingolimod for >2 years were characterized by higher levels of NR4A2 compared with the T0 group, approaching those of HCs. NR4A1 and NR4A3 levels were not altered. Conclusions: Involvement of the NR4A family in the pathogenesis of multiple sclerosis and a role of Fingolimod in the recovery from NR4A2 deficit can be hypothesized based on our data. [ABSTRACT FROM AUTHOR]
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- 2019
- Full Text
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10. Monocytes and CD4 + T cells contribution to the under-expression of NR4A2 and TNFAIP3 genes in patients with multiple sclerosis
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Navone, N.D., Perga, S., Martire, S., Berchialla, P., Malucchi, S., and Bertolotto, A.
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- 2014
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11. Making Forest Values Work: Enhancing Multi-Dimensional Perspectives towards Sustainable Forest Management
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Blagojević, D, Martire, S, Hendrickson, C, Hanzu, M, Galante, M, Kähkönen, T, Põllumäe, P, Fontana, V, Radtke, A, Stojanovski, V, Nedeljković, J, Poduška, Z, Stojkovic, D, Sanches-Pereira, A, Schubert, F, Hendrickson, CY, Galante, MV, Blagojević, D, Martire, S, Hendrickson, C, Hanzu, M, Galante, M, Kähkönen, T, Põllumäe, P, Fontana, V, Radtke, A, Stojanovski, V, Nedeljković, J, Poduška, Z, Stojkovic, D, Sanches-Pereira, A, Schubert, F, Hendrickson, CY, and Galante, MV
- Abstract
Background and Purpose: Sustainability, sustainable development and sustainable forest management are terms that are commonly, and interchangeably used in the forest industry, however their meaning take on different connotations, relative to varying subject matter. The aim of this paper is to look at these terms in a more comprehensive way, relative to the current ideology of sustainability in forestry. Materials and Methods: This paper applies a literature review of the concepts of: i) sustainable development; ii) sustainable forest management; and iii) economic and non-economic valuation. The concepts are viewed through a historical dimension of shifting paradigms, originating from production- to service-based forestry. Values are discussed through a review of general value theory and spatial, cultural and temporal differences in valuation. Along the evolution of these concepts, we discuss their applicability as frameworks to develop operational guidelines for forest management, relative to the multi-functionality of forests. Results and Conclusions: Potential discrepancies between the conceptual origins of sustainable development and sustainable forest management are highlighted, relative to how they have been interpreted and diffused as new perceptions on forest value for the human society. We infer the current paradigm may not reflect the various dimensions adequately as its implementation is likely to be more related to the distribution of power between stakeholders, rather than the value stakeholders’ place on the various forest attributes
- Published
- 2016
12. Prevalence of aging-associated cognitive decline in an Italian elderly population: Results from cross-sectional phase of Italian Project on Epidemiology of Alzheimer's disease (IPREA)
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Scafato E, Gandin C, Galluzzo L, Ghirini S, Cacciatore F, Capurso A, Solfrizzi V, Panza F, Cocchi A, Consoli D, Enzi G, Frisoni G, B, Gandolfo C, Giampaoli S, Inzitari D, Maggi S, Crepaldi G, Mariotti S, Mecocci P, Motta M, Negrini R, Postacchini D, Rengo F, Farchi G, Martire S, Gallina P, Baldereschi M, Di Carlo A, Conti M, Galluzzi S, Cruciani G, Giuli C, ABETE, PASQUALE, Forti P, Tabanelli P, Zuccalà G, Calabrese C, Sica G, Estraneo A, Naso F, Torcasio G, Rinaldi P, Serafini V, Senin U., Scafato, E, Gandin, C, Galluzzo, L, Ghirini, S, Cacciatore, F, Capurso, A, Solfrizzi, V, Panza, F, Cocchi, A, Consoli, D, Enzi, G, Frisoni, G, B, Gandolfo, C, Giampaoli, S, Inzitari, D, Maggi, S, Crepaldi, G, Mariotti, S, Mecocci, P, Motta, M, Negrini, R, Postacchini, D, Rengo, F, Farchi, G, Martire, S, Gallina, P, Baldereschi, M, Di Carlo, A, Conti, M, Galluzzi, S, Cruciani, G, Giuli, C, Abete, Pasquale, Forti, P, Tabanelli, P, Zuccalà, G, Calabrese, C, Sica, G, Estraneo, A, Naso, F, Torcasio, G, Rinaldi, P, Serafini, V, and Senin, U.
- Abstract
Background and aims: The prevalence of the preclinical phase of dementia varies greatly, according to the diagnostic criteria and assessment procedures applied. The purpose of this study was to estimate the prevalence of cognitive impairment according to the Aging-Associated Cognitive Decline (AACD) diagnostic criteria in an Italian elderly population. Methods: In a multicenter community-based prospective study, 4785 Italian subjects aged 65-84 years, randomly selected from the registries of 12 Italian municipalities, were assessed by personal and informant interviews, physical and neurological examinations and an extensive neuropsychological battery. Results: Of these older subjects, 274 (9.2%) fulfilled all the AACD criteria, whereas 561 (18.8%) fulfilled only 3 of them (AACD-3). When the two groups diagnosed according to AACD criteria (AACD and AACD- 3) were merged, the prevalence was 28.0% (28.3% for men, 27.6% for women). Two other groups of subjects were also identified: a) Subjects with Objective evidence of Cognitive Decline without cognitive complaints (OCD), 508 (17.0%), i.e., subjects with documented neuropsychological deficits, although neither subjects nor informants reported cognitive complaints; and b) Subjects with Cognitive Complaints without objective demonstrable cognitive deficits (CC), 44 (1.5%), i.e., subjects and/or informants reported cognitive complaints without evidence of neuropsychological deficits. Thus, taking into account the additional OCD group, a total of 1343 persons with cognitive impairment without dementia (45.0%) was identified. Conclusions: On the basis of our results, we estimate that 45% of our population-based Italian sample aged 65-84 years had some kind of cognitive deficits without dementia.
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- 2010
13. Carrying capacity assessment of forest resources: Enhancing environmental sustainability in energy production at local scale
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Martire, S, Castellani, V, Sala, S, MARTIRE, SALVATORE, CASTELLANI, VALENTINA, SALA, SERENELLA, Martire, S, Castellani, V, Sala, S, MARTIRE, SALVATORE, CASTELLANI, VALENTINA, and SALA, SERENELLA
- Abstract
Wood fuels are recognized as a crucial energy source whose sustainable use should be ensured. To ensure sustainability, the calculation of the annual available biomass is one of the bases of forest management. The novelty of our study stem from an extended evaluation of the carrying capacity for taking into account different site-specific - as well condition-specific - aspects usually neglected. In the case of natural mixed forests, local management plans define the criteria to be adopted in the land management identify the main functions of the forest plots. However, for ensure sustainable forest management, ecological and technical local constraints should be assessed in details in order to quantify wood potentially available. As a standardized procedure for this comprehensive wood availability is missing, the present study propose a GIS-based decision support system (DSS) and methodology for calculating the biomass availability while supporting the local resource planning. In particular, we focus on the environmental sustainability of bio-energy production. In fact, applying the DSS, it is possible to calculate three indicators: operational carrying capacity (OCC), chip potential (CP) and technical potential (TP). Those indicators are related, respectively, to the availability of wood from forests according to local plans criteria, the potential of wood chips production, and the comparison of total available biomass with current uses. The DDS considers the actual uses of the resource, supporting local planners in properly assess the forestry sector and its possible developments. Two case studies on alpine mountain areas are presented and discussed in light of contributing to face the challenge of energy planning at local scale. The DDS allow calculating the number of chip fueled boilers which could be installed in the areas, using local resource below their carrying capacity. DSS application helps highlighting some challenges in resource planning and use at local
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- 2015
14. Sustainability impact assessment for local energy supplies' development - The case of the alpine area of Lake Como, Italy
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Martire, S, Tuomasjukka, D, Lindner, M, Fitzgerald, J, Castellani, V, MARTIRE, SALVATORE, CASTELLANI, VALENTINA, Martire, S, Tuomasjukka, D, Lindner, M, Fitzgerald, J, Castellani, V, MARTIRE, SALVATORE, and CASTELLANI, VALENTINA
- Abstract
The development of distributed energy systems has important environmental, social and economic implications. Local decision-making processes must be guided by a careful evaluation of the sustainability of production chains and alternative choices. The aim of this study is to explore if and how an integrated assessment can quantify the extent to which bioenergy supply chain development contributes to rural development and energy policy objectives. We applied a Sustainability Impact Assessment (SIA) for local bioenergy development in the alpine area of Lake Como (Italy). We modeled the local bioenergy chain in 2008 and eleven scenarios considering different biomass utilizations, mechanization levels, combustion technologies, and subsidies schemes at 2020. We calculated economic, social and environmental indicators. We interpret and discuss the scenario analysis in order to support the bioenergy planning under the light of its implications for the different policy aims and concerns.
- Published
- 2015
15. Modulation of the expression and aggregation of alpha-synuclein and of ERp57 in cellular and animal models of Parkinson disease
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Aureli, Cristina, Francioso, A., Masci, A., Faraldi, M., Martire, S., Ferraro, Anna, Fontana, Mario, D'Erme, Maria, and Mosca, Luciana
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Parkinson's disease ,5-S-cysteinyldopamine ,alpha-synuclein ,ERp57 ,Parkinson's disease, 5-S-cysteinyldopamine, alpha-synuclein, ERp57 - Published
- 2011
16. Development of methodologies for the evaluation of sustainability to support the local scale planning of forest -wood-energy supply chains
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Martire, S, COLLINA, ELENA MARIA, MARTIRE, SALVATORE, Martire, S, COLLINA, ELENA MARIA, and MARTIRE, SALVATORE
- Abstract
The Thesis deals with sustainability assessment methods for supporting energy policies at local scale. Methodologies and tools should adapt to policy needs, and bring benefits to local stakeholders and decision-makers. The Thesis aims to contribute to bring innovative sustainability assessment methods into local level decision processes, and to develop a comprehensive method to support energy, environmental and rural policies at local scale. It originates from the following research questions: How should scientific assessment methods have to be adapted to local policy needs? What are benefits and limitations for the involved actors in applying sustainability assessments at local scale? The different presented works provide some findings to enhance the Science-Policy link, with a focus on local energy policy. The research activity faced different aspects related to local decision-making support, with the general aim of providing effective tools to support local policy in developing bioenergy supply chains. The challenge of local policies and plans related to resource usage and productive chains is to respond to regional or supra-regional guidelines, to address site specific needs from local communities and stakeholders, and to set up detailed objectives and actions, taking into account the actual material availability, and possible development scenarios. The Chapter 1 focuses on the need of a multidisciplinary approach for ensuring sustainable processes and plans. It describes the relationships between energy and forestry sectors, and the need of holistic methods to plan a sustainable use of the resources. Particularly, the importance of evaluating environmental, social and economic aspects at local scale is highlighted. The methods – proposed in Chapters 2, 3 and 4 – contribute to quantitatively evaluate of environmental aspects – considering also social and economic dimensions – and to define achievable policy targets.
- Published
- 2014
17. Sostenibilità ambientale di filiere bosco-legno-energia locali: valutazione della Capacità di Carico del sistema forestale
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Corrado, F, Di Bella, E, Porcellana, V, Martire, S, Castellani, V, Sala, S, MARTIRE, SALVATORE, CASTELLANI, VALENTINA, SALA, SERENELLA, Corrado, F, Di Bella, E, Porcellana, V, Martire, S, Castellani, V, Sala, S, MARTIRE, SALVATORE, CASTELLANI, VALENTINA, and SALA, SERENELLA
- Abstract
L'utilizzo delle risorse naturali, così come l'uso del suolo o l'utilizzazione di servizi ecosistemici, dovrebbe essere basato su una valutazione della Capacità di Carico del sistema, ed essere progettato tenendo in considerazione aspetti sociali, economici e ambientali, con una valutazione di sostenibilità integrata delle risorse. Lo studio riguarda lo sviluppo di una metodologia per valutare la sostenibilità ambientale di un sistema forestale per uso energetico a scala locale, misurata in termini di capacità di carico dell’intero sistema. La metodologia è stata sviluppata e testata nell’ambito di un Progetto Integrato Transfrontaliero in alpino area alpina. Una prima applicazione in due Comunità Montane della Provincia di Como ha permesso di valutare le potenzialità energetiche delle aree considerate, in base alla risorsa disponibile
- Published
- 2014
18. Exogenous Sonic Hedgehog Modulates the Pool of GABAergic Interneurons During Cerebellar Development
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De Luca, A., primary, Parmigiani, E., additional, Tosatto, G., additional, Martire, S., additional, Hoshino, M., additional, Buffo, A., additional, Leto, K., additional, and Rossi, F., additional
- Published
- 2014
- Full Text
- View/download PDF
19. Methodology for Sustainability Assessment and Resource Efficiency in Forest Sector
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Martire, S, Castellani, V, Sala, S, Ban, M, [et al.], MARTIRE, SALVATORE, CASTELLANI, VALENTINA, SALA, SERENELLA, Martire, S, Castellani, V, Sala, S, Ban, M, [et al.], MARTIRE, SALVATORE, CASTELLANI, VALENTINA, and SALA, SERENELLA
- Abstract
The use of natural resources, as well as land use or utilization of other ecosystem services, should be based on an evaluation of carrying capacity of the system, and should be designed taking into account social, economic and environmental dimensions, with an integrated assessment of renewable energy. Therefore, the methodology to evaluate the Carrying Capacity presented below will be a part of a Decision Support System, which will include indicators about environmental impacts, technology assessment of machineries, economic dimension, and social aspects. The methodology developed for the site-specific assessment of the biomass availability, with respect to carrying capacity, consists of quantification and mapping (using Geographic Information Systems) of forest biomass taking into account local features (e.g. abundance, spatial distribution and type of species) as reported in local territorial plans. The quantitative results, which represent three different \\\"availability levels\\\" of biomass are: the Theoretical Potential, the Technical Potential, and the Net Energy Potential. The Theoretical Potential is defined as the biomass that can be harvested annually without affecting the resource and as it is stated by local planning. the Technical Potential is obtained by subtracting firstly the Current Uses of wood from the Theoretical Potential. Then, the Technical Losses are subtracted in order to obtain the Technical Potential. It represents the estimated biomass available for the energy use. Final aim of the proposed methodology is to assess the feasibility of short supply chains forest-wood-energy, so the ultimate goal should be to obtain a potential value in terms of energy: the Net Energy Potential. The methodology is applied to two mountain areas of Como Province: Comunità Montana Lario Intelvese (CMLI) and Comunità Montana Triangolo Lariano (CMTL). Results are distribution and availability of forest biomass. In terms of Replacement of fossil fuel, main re
- Published
- 2012
20. Sustainability assessment of forest biomass supply chain at local scale: carrying capacity of the system for energy valorisation
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Martire, S, Castellani, V, Sala, S, MARTIRE, SALVATORE, CASTELLANI, VALENTINA, SALA, SERENELLA, Martire, S, Castellani, V, Sala, S, MARTIRE, SALVATORE, CASTELLANI, VALENTINA, and SALA, SERENELLA
- Abstract
Evaluation of the trade-off between the benefits coming from forest resources’ use and the conservation of forest ecosystems is needed. Considering the use of biomass for energy purpose, on one hand the use of wood resources should be based on an evaluation of the “carrying capacity” of the forest ecosystem and site-specific characteristics; on the other hand, the role of biomass valorisation has to be assessed considering the socio economic benefit or drawbacks due to the further development of the supply chain. In the context of a site –specific sustainability assessement of a wood energy supply chain, the research focuses on development of an expeditious methodology to obtain georeferred quantity of biomass at local scale for mountain forest areas, in order to facilitate energy planning that considers the local system carrying capacity and the potential of substitution of fossil fuels. Methodology developed for the site-specific assessment of the biomass availability, with respect to carrying capacity, consists of quantification and spatial distribution (using Geographic Information System) of forest biomass that considers local features as reported in local territorial plans and it applies Life Cycle Assessment for supporting the overall environmental assessment. Biomass value calculated has been converted from volume to mass, considering species features and water content. The result is compared with current utilization of wood, and waste products from forestry processing are estimated, in order to quantify the mass available for energy valorisation. Then, the energy potential is estimated, from biomass quantity and from wood features, principally the lower calorific value and water content for each species. Finally, the potential of substitution of fossil fuels is calculated, knowing energy potential from available biomass for energy use. The methodology is applied to two mountain areas, Comunità Montana Lario Intelvese (CMLI) and Comunità Montana Triangolo La
- Published
- 2011
21. Multidimensional Sustainability Assessment of Forest Resource Supply Chain
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Martire, S, Sala, S, Castellani, V, LIMA STORNI ROCHA, A, MARTIRE, SALVATORE, SALA, SERENELLA, CASTELLANI, VALENTINA, LIMA STORNI ROCHA, ALLINE, Martire, S, Sala, S, Castellani, V, LIMA STORNI ROCHA, A, MARTIRE, SALVATORE, SALA, SERENELLA, CASTELLANI, VALENTINA, and LIMA STORNI ROCHA, ALLINE
- Abstract
Valorisation of biomass resources is recognized as a new frontier of economically sustainable and environmentally friendly activities. Nevertheless, it is not possible to assume a positive comprehensive balance in term of sustainability of products based only on the fact that they are bio-based, but it is necessary to perform exhaustive studies in a life cycle perspective. A multidimensional approach to sustainability assessment is therefore needed in order to support decision making at various level, trough comprehensive composite indicators. The present study develops a methodology for assessing the sustainability level of a technological/ operational options applied in a specific context, taking into account sustainability criteria. A comparison may be done among a number of different technologies to choose the best option in term of environmental, economic and social performance. A set of specific indicators is developed to assess the performance of a number of potential options for the implementation of forest biomass system exploitation.
- Published
- 2011
22. Multidisciplinary sustainability evaluation of supply chains for forest resource use
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Castellani, V, Martire, S, Sala, S, CASTELLANI, VALENTINA, MARTIRE, SALVATORE, SALA, SERENELLA, Castellani, V, Martire, S, Sala, S, CASTELLANI, VALENTINA, MARTIRE, SALVATORE, and SALA, SERENELLA
- Abstract
The role of forests as important source of ecosystem services has been underlined by European policies. Particularly the “Forest Action Plan” specifies the necessity of contributing to economic, social and environmental wellness and increasing the competitiveness of the European forest sector, also through the promotion of forest biomass use for energy purpose. Within this scenario and criticality associated with it, this research aims to develop a Decision Support System (DSS) for wood fuel supply chains planning. It consists of a multidisciplinary set of indicators to assess the sustainability of the entire forest-wood-energy system. For the evaluation of each specific indicator, the methodology uses quantitative cardinal scales, tool for multi-criteria analysis application where all the indicators are related to a conventional scale with the aim at allowing comparability between different criteria and reducing heterogeneous measures to comparable values. The case study used to test the methodology consists of a short wood-energy chain aimed at use of forest biomass energy for heat production in the Mountain Community Lario Intelvese. In order to develop the set of indicators all the phases of the supply chain have been analyzed in detail, from the harvest of forest biomass to energy conversion technologies, considering the possible environmental and techno-economic constraints that can affect the implementation of each stage of which the chain is composed. The DSS is designed as a tool to provide detailed information about environmental, social and economic sustainability of different solutions as a support to decision making about supply chain planning. Final aim of this planning should be to balance among several forest ecosystem services, such as resources and habitat conservation and economic valorization of forest biomass. For instance, one crucial aspect is the trade-off between the necessity to respect the carrying capacity of the forest ecosystem and to o
- Published
- 2011
23. Withdrawal of palatable diet reduces feeding while acute access is marked by hyperphagia in the rat
- Author
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Morris, M., primary, South, T., additional, Martire, S., additional, and Westbrook, F., additional
- Published
- 2012
- Full Text
- View/download PDF
24. PARP-1 inhibition decreases Beta-Amyloid-induced neurodegeneration: a cellular and animal model study
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Martire⁎, S., primary, Fuso, A., additional, Rotili, D., additional, Muzi, A., additional, Giordano, C., additional, Vernole, P., additional, Lococo, E., additional, Faraldi, M., additional, Masci, A., additional, Miele, A., additional, Graziani, G., additional, Scarpa, S., additional, Mosca, L., additional, and d’Erme et al, M., additional
- Published
- 2012
- Full Text
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25. Exogenous Sonic Hedgehog Modulates the Pool of GABAergic Interneurons During Cerebellar Development.
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Luca, A., Parmigiani, E., Tosatto, G., Martire, S., Hoshino, M., Buffo, A., Leto, K., and Rossi, F.
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GABA ,CEREBELLUM development ,INTERNEURONS ,PROGENITOR cells ,CELL proliferation ,CELLULAR signal transduction ,GENE expression - Abstract
All cerebellar GABAergic interneurons were derived from a common pool of precursor cells residing in the embryonic ventricular zone (VZ) and migrating in the prospective white matter (PWM) after birth, where both intrinsic and extrinsic factors contribute to regulate their amplification. Among the environmental factors, we focused on Sonic hedgehog (Shh), a morphogen well known to regulate neural progenitor cell proliferation. We asked if and how exogenous Shh treatment affects the lineage of cerebellar GABAergic interneurons. To address these issues, exogenous Shh was administered to embryonic and postnatal organotypic slices. We found that Shh is able to expand the pool of interneuron progenitors residing in the embryonic epithelium and in the postnatal PWM. In particular, Shh signalling pathway was highly mitogenic at early developmental stages of interneuron production, whereas its effect decreased after the first postnatal week. Gene expression analysis of sorted cells and in situ hybridization further showed that immature interneurons express both the Shh receptor patched and the Shh target gene Gli1. Thus, within the interneuron lineage, Shh might exert regulatory functions also in postmitotic cells. On the whole, our data enlighten the role of Shh during cerebellar maturation and further broaden our knowledge on the amplification mechanisms of the interneuron progenitor pool. [ABSTRACT FROM AUTHOR]
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- 2015
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26. Serum and cerebrospinal fluid neurofilament light chains measured by SIMOA™, Ella™, and Lumipulse™ in multiple sclerosis naïve patients.
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Vecchio, D, Puricelli, C, Malucchi, Virgilio, E, Martire, S, Perga, S, Passarelli, F, Valentino, Di Sapio, A, Cantello, R, Dianzani, U, and Comi, C
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•Neurofilament light chains (NfL) require ultrasensitive techniques to be measured in the serum, and different platforms are available: Ella™, Lumipulse™, and SIMOA™.•In newly diagnosed relapsing-remitting multiple sclerosis (MS) patients CSF and serum NfL absolute levels strongly correlated between assays, although being more elevated with Ella™.•SIMOA™ and Lumipulse™ showed high agreement for serum and CSF values.
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- 2023
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27. Expression of six inflammation-related genes in monocytes and CD4+T lymphocytes from patients with multiple sclerosis
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Navone, N. D., Perga, S., Martire, S., Francesca Montarolo, Berchialla, P., and Bertolotto, A.
28. Correlation structure among chemical-physical variables measured in municipal solid waste disposal
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Rosa Caggiano, Coppola, R., D Emilio, M., Macchiato, M., Martire, S., Ragosta, M., and Sabia, S.
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Chemical-physical variables ,soil pollution ,multivariate analysis ,electric conductivity ,Municipal solid waste ,heavy metals ,magnetic susceptibility - Abstract
Innovative methods for monitoring pollutant concentrations in surface and subsurface soil are crucial tasks in environmental research. Actually, the main purpose is to develop monitoring strategies able to provide detailed information about temporal and spatial evolution of contaminants in subsoil. Here, we present a monitoring strategy for a municipal solid waste disposal, integrating a field survey to measure chemical-physical parameters of soil, and a multivariate statistical procedure for data analysis. On a georeferenced sampling grid, we collected superficial soil and determined ten parameters. Particularly, we measured: in situ soil magnetic susceptibility, total concentrations of 7 heavy metals (Co, Cu, Fe, Mn, Ni, Pb, Zn), soil electric conductivity, and pH. Data analysis is based on a multivariate procedure aimed to characterize the underlying correlation structure. Principal component analysis and clustering, algorithm are applied in successive runs. for individuating a set of new independent variables and a classification of sampling points.
29. COVID-19 in patients with aggressive MS treated with aHSCT: a multi-center study
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Sbragia, E., Mariottini, A., Capobianco, M., Martire, S., Moiola, L., Amato, M. P., Massacesi, L., giovanni luigi mancardi, Boffa, G., and Inglese, M.
30. Sustainability impact assessment for local energy supplies' development – The case of the alpine area of Lake Como, Italy
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Valentina Castellani, Salvatore Martire, Joanne Fitzgerald, Marcus Lindner, Diana Tuomasjukka, Martire, S, Tuomasjukka, D, Lindner, M, Fitzgerald, J, and Castellani, V
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Renewable Energy, Sustainability and the Environment ,business.industry ,Sustainability assessment ,Supply chain ,Environmental resource management ,Forestry ,Subsidy ,Energy planning ,Energy policy ,Woody chip ,Bioenergy ,Sustainability ,Production (economics) ,Rural development ,Scenario analysis ,business ,Mountain forests ,Waste Management and Disposal ,Agronomy and Crop Science - Abstract
The development of distributed energy systems has important environmental, social and economic implications. Local decision-making processes must be guided by a careful evaluation of the sustainability of production chains and alternative choices. The aim of this study is to explore if and how an integrated assessment can quantify the extent to which bioenergy supply chain development contributes to rural development and energy policy objectives. We applied a Sustainability Impact Assessment (SIA) for local bioenergy development in the alpine area of Lake Como (Italy). We modeled the local bioenergy chain in 2008 and eleven scenarios considering different biomass utilizations, mechanization levels, combustion technologies, and subsidies schemes at 2020. We calculated economic, social and environmental indicators. We interpret and discuss the scenario analysis in order to support the bioenergy planning under the light of its implications for the different policy aims and concerns.
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- 2015
31. Making Forest Values Work: Enhancing Multi-Dimensional Perspectives towards Sustainable Forest Management
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Doni Blagojević, Salvatore Martire, Cary Yungmee Hendrickson, Mihail Hanzu, Michael Victor Galante, Tanja Kähkönen, Priit Põllumäe, Veronika Fontana, Anna Radtke, Vladimir Stojanovski, Jelena Nedeljković, Zoran Poduška, Dragana Stojkovic, Alessandro Sanches-Pereira, Florian Schubert, Blagojević, D, Martire, S, Hendrickson, C, Hanzu, M, Galante, M, Kähkönen, T, Põllumäe, P, Fontana, V, Radtke, A, Stojanovski, V, Nedeljković, J, Poduška, Z, Stojkovic, D, Sanches-Pereira, A, and Schubert, F
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sustainable forest management, ecosystems multi-dimensionality, value theory, sustainability, forest policy, forest governance ,010504 meteorology & atmospheric sciences ,media_common.quotation_subject ,Sustainable forest management ,Forest management ,010501 environmental sciences ,01 natural sciences ,Ecoforestry ,11. Sustainability ,lcsh:Forestry ,0105 earth and related environmental sciences ,media_common ,Valuation (finance) ,Sustainable development ,sustainable forest management ,ecosystems multi-dimensionality ,value theory ,sustainability ,forest policy ,forest governance ,business.industry ,Environmental resource management ,Forestry ,15. Life on land ,Value theory ,Sustainability ,lcsh:SD1-669.5 ,Ideology ,business - Abstract
Background and Purpose: Sustainability, sustainable development and sustainable forest management are terms that are commonly, and interchangeably used in the forest industry, however their meaning take on different connotations, relative to varying subject matter. The aim of this paper is to look at these terms in a more comprehensive way, relative to the current ideology of sustainability in forestry. Materials and Methods: This paper applies a literature review of the concepts of: i) sustainable development; ii) sustainable forest management; and iii) economic and non-economic valuation. The concepts are viewed through a historical dimension of shifting paradigms, originating from production- to service-based forestry. Values are discussed through a review of general value theory and spatial, cultural and temporal differences in valuation. Along the evolution of these concepts, we discuss their applicability as frameworks to develop operational guidelines for forest management, relative to the multi-functionality of forests. Results and Conclusions: Potential discrepancies between the conceptual origins of sustainable development and sustainable forest management are highlighted, relative to how they have been interpreted and diffused as new perceptions on forest value for the human society. We infer the current paradigm may not reflect the various dimensions adequately as its implementation is likely to be more related to the distribution of power between stakeholders, rather than the value stakeholders’ place on the various forest attributes.
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- 2015
32. Carrying capacity assessment of forest resources: Enhancing environmental sustainability in energy production at local scale
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Valentina Castellani, Serenella Sala, Salvatore Martire, Martire, S, Castellani, V, and Sala, S
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Economics and Econometrics ,Engineering ,Resource (biology) ,business.industry ,Forest management planning ,Environmental resource management ,Sustainable forest management ,Forest management ,Land management ,Energy planning ,Carrying capacity ,GIS ,Bioma ,Sustainability ,Energy source ,business ,Waste Management and Disposal - Abstract
Wood fuels are recognized as a crucial energy source whose sustainable use should be ensured. To ensure sustainability, the calculation of the annual available biomass is one of the bases of forest management. The novelty of our study stem from an extended evaluation of the carrying capacity for taking into account different site-specific – as well condition-specific – aspects usually neglected. In the case of natural mixed forests, local management plans define the criteria to be adopted in the land management identify the main functions of the forest plots. However, for ensure sustainable forest management, ecological and technical local constraints should be assessed in details in order to quantify wood potentially available. As a standardized procedure for this comprehensive wood availability is missing, the present study propose a GIS-based decision support system (DSS) and methodology for calculating the biomass availability while supporting the local resource planning. In particular, we focus on the environmental sustainability of bio-energy production. In fact, applying the DSS, it is possible to calculate three indicators: operational carrying capacity (OCC), chip potential (CP) and technical potential (TP). Those indicators are related, respectively, to the availability of wood from forests according to local plans criteria, the potential of wood chips production, and the comparison of total available biomass with current uses. The DDS considers the actual uses of the resource, supporting local planners in properly assess the forestry sector and its possible developments. Two case studies on alpine mountain areas are presented and discussed in light of contributing to face the challenge of energy planning at local scale. The DDS allow calculating the number of chip fueled boilers which could be installed in the areas, using local resource below their carrying capacity. DSS application helps highlighting some challenges in resource planning and use at local scale.
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- 2015
33. Development of methodologies for the evaluation of sustainability to support the local scale planning of forest -wood-energy supply chains
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MARTIRE, SALVATORE, Martire, S, and COLLINA, ELENA MARIA
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CHIM/12 - CHIMICA DELL'AMBIENTE E DEI BENI CULTURALI ,Sostenibilità, Capacità di carico, boschi, legno, energia, emissioni, GIS - Abstract
The Thesis deals with sustainability assessment methods for supporting energy policies at local scale. Methodologies and tools should adapt to policy needs, and bring benefits to local stakeholders and decision-makers. The Thesis aims to contribute to bring innovative sustainability assessment methods into local level decision processes, and to develop a comprehensive method to support energy, environmental and rural policies at local scale. It originates from the following research questions: How should scientific assessment methods have to be adapted to local policy needs? What are benefits and limitations for the involved actors in applying sustainability assessments at local scale? The different presented works provide some findings to enhance the Science-Policy link, with a focus on local energy policy. The research activity faced different aspects related to local decision-making support, with the general aim of providing effective tools to support local policy in developing bioenergy supply chains. The challenge of local policies and plans related to resource usage and productive chains is to respond to regional or supra-regional guidelines, to address site specific needs from local communities and stakeholders, and to set up detailed objectives and actions, taking into account the actual material availability, and possible development scenarios. The Chapter 1 focuses on the need of a multidisciplinary approach for ensuring sustainable processes and plans. It describes the relationships between energy and forestry sectors, and the need of holistic methods to plan a sustainable use of the resources. Particularly, the importance of evaluating environmental, social and economic aspects at local scale is highlighted. The methods – proposed in Chapters 2, 3 and 4 – contribute to quantitatively evaluate of environmental aspects – considering also social and economic dimensions – and to define achievable policy targets.
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- 2014
34. Sostenibilità ambientale di filiere bosco-legno-energia locali: valutazione della Capacità di Carico del sistema forestale
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MARTIRE, SALVATORE, CASTELLANI, VALENTINA, SALA, SERENELLA, Corrado, F, Di Bella, E, Porcellana, V, Martire, S, Castellani, V, and Sala, S
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Foreste, Energia, Sostenibilità, Capacità di Carico, GIS - Abstract
L'utilizzo delle risorse naturali, così come l'uso del suolo o l'utilizzazione di servizi ecosistemici, dovrebbe essere basato su una valutazione della Capacità di Carico del sistema, ed essere progettato tenendo in considerazione aspetti sociali, economici e ambientali, con una valutazione di sostenibilità integrata delle risorse. Lo studio riguarda lo sviluppo di una metodologia per valutare la sostenibilità ambientale di un sistema forestale per uso energetico a scala locale, misurata in termini di capacità di carico dell’intero sistema. La metodologia è stata sviluppata e testata nell’ambito di un Progetto Integrato Transfrontaliero in alpino area alpina. Una prima applicazione in due Comunità Montane della Provincia di Como ha permesso di valutare le potenzialità energetiche delle aree considerate, in base alla risorsa disponibile
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- 2014
35. Alcohol and older people. The European project VINTAGE: good health into older age. Design, methods and major results
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Lucia, Galluzzo, Emanuele, Scafato, Sonia, Martire, Peter, Anderson, Joan, Colom, Lidia, Segura, Andrew, McNeill, Hana, Sovinova, Sandra, Rados Krnel, Salme, Ahlström, Lucilla, Di Pasquale, [Galluzzo L, Scafato E, Martire S] WHO Collaborating Centre for Research & Health Promotion on Alcohol and Alcohol-Related Health Problems, Osservatorio Nazionale Alcol, Centro Nazionale di Epidemiologia, Sorveglianza e Promozione della Salute, Istituto Superiore di Sanità, Rome, Italy. [Anderson P] Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands. [Colom J, Segura L] Programa d’Abús de Substàncies, Agència de Salut Pública de Catalunya, Departament de Salut, Generalitat de Catalunya, Barcelona, Spain, and Departament de Salut
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Research design ,Gerontology ,Male ,Otros calificadores::Otros calificadores::/prevención & control [Otros calificadores] ,medicine.medical_specialty ,Health Personnel ,Health Status ,Psychological intervention ,Information Dissemination ,Scientific literature ,Health Promotion ,Persones grans ,assunzione di alcolici ,Other subheadings::Other subheadings::/prevention & control [Other subheadings] ,trastornos inducidos químicamente::trastornos relacionados con sustancias::trastornos relacionados con el alcohol::alcoholismo [ENFERMEDADES] ,medicine ,Consum d'alcohol - Prevenció ,Humans ,personas::Grupos de Edad::adulto::anciano [DENOMINACIONES DE GRUPOS] ,Aged ,Aged, 80 and over ,Evidence-Based Medicine ,business.industry ,lcsh:Public aspects of medicine ,Public health ,Public Health, Environmental and Occupational Health ,lcsh:RA1-1270 ,General Medicine ,Evidence-based medicine ,Grey literature ,progetto di ricerca ,Europe ,Alcoholism ,Health promotion ,Persons::Age Groups::Adult::Aged [NAMED GROUPS] ,Female ,Chemically-Induced Disorders::Substance-Related Disorders::Alcohol-Related Disorders::Alcoholism [DISEASES] ,anziani ,Europa ,metodi ,business - Abstract
Consum d'alcohol; Persones grans; Disseny de recerca Consumo de alcohol; Personas mayores; Diseño de investigación Alcohol drinking; Aged; Research design Objectives: The European project VINTAGE – Good Health Into Older Age aims at filling the knowledge gap and building capacity on alcohol and the elderly, encouraging evidence- and experience-based interventions. Methods: Systematic review of scientific literature on the impact of alcohol on older people; ad hoc survey and review of grey literature to collect EU examples of good practices for prevention; dissemination of findings to stakeholders involved in the field of alcohol, aging or public health in general. Results: Design and procedures of the VINTAGE project are described, providing also an outline of major results, with particular attention to those related to the dissemination activity. Conclusions: Much more information and research is needed. This issue should be part of both alcohol and healthy ageing policies. The VINTAGE project “Good Health into Older Age” is a project funded by the Executive Agency for Health and Consumers, under the European Commission Second Programme of Community Action in the Field of Health 2008-2013 (Grant Agreement no. 20081203).
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- 2012
36. Methodology for Sustainability Assessment and Resource Efficiency in Forest Sector
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MARTIRE, SALVATORE, CASTELLANI, VALENTINA, SALA, SERENELLA, Martire, S, Castellani, V, Sala, S, Ban, M, and [et al.]
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Spatial Analysis, Energy Planning, Carrying Capacity, Sustainability Assessment - Abstract
The use of natural resources, as well as land use or utilization of other ecosystem services, should be based on an evaluation of carrying capacity of the system, and should be designed taking into account social, economic and environmental dimensions, with an integrated assessment of renewable energy. Therefore, the methodology to evaluate the Carrying Capacity presented below will be a part of a Decision Support System, which will include indicators about environmental impacts, technology assessment of machineries, economic dimension, and social aspects. The methodology developed for the site-specific assessment of the biomass availability, with respect to carrying capacity, consists of quantification and mapping (using Geographic Information Systems) of forest biomass taking into account local features (e.g. abundance, spatial distribution and type of species) as reported in local territorial plans. The quantitative results, which represent three different \\\"availability levels\\\" of biomass are: the Theoretical Potential, the Technical Potential, and the Net Energy Potential. The Theoretical Potential is defined as the biomass that can be harvested annually without affecting the resource and as it is stated by local planning. the Technical Potential is obtained by subtracting firstly the Current Uses of wood from the Theoretical Potential. Then, the Technical Losses are subtracted in order to obtain the Technical Potential. It represents the estimated biomass available for the energy use. Final aim of the proposed methodology is to assess the feasibility of short supply chains forest-wood-energy, so the ultimate goal should be to obtain a potential value in terms of energy: the Net Energy Potential. The methodology is applied to two mountain areas of Como Province: Comunità Montana Lario Intelvese (CMLI) and Comunità Montana Triangolo Lariano (CMTL). Results are distribution and availability of forest biomass. In terms of Replacement of fossil fuel, main results for the two case studies are 2138 toe/y for the CMLI area and 2351 toe/ for the CMTL area. Policy of the Province of Como identifies small chips plants (power below 1 MWt) as optimal solution in order to use the resource in energetic valorisation. A thermal power plant using forest chips for district heating is located in the CMLI area, it has a power of 240 kWt and it supplies heat to a pool. Considering the consumption of this facility and the biomass availability calculated, it is estimated that each study area can be provided with 20 similar plants. The proposed methodology evaluates the possibility that forests can provide the supply of raw material for energy production among ecosystem services. In addition, this assessment aims to integrate considerations to protect the other ecosystem services. Moreover, the proposed methodology is useful for a preliminary assessment of the possibility to considering woody biomass in energy planning at local level.
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- 2012
37. Multidimensional Sustainability Assessment of Forest Resource Supply Chain
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MARTIRE, SALVATORE, SALA, SERENELLA, CASTELLANI, VALENTINA, LIMA STORNI ROCHA, ALLINE, Martire, S, Sala, S, Castellani, V, and LIMA STORNI ROCHA, A
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sustainability assessment, carrying capacity, decision support system, forest biomass, spatial analysis ,BIO/07 - ECOLOGIA - Abstract
Valorisation of biomass resources is recognized as a new frontier of economically sustainable and environmentally friendly activities. Nevertheless, it is not possible to assume a positive comprehensive balance in term of sustainability of products based only on the fact that they are bio-based, but it is necessary to perform exhaustive studies in a life cycle perspective. A multidimensional approach to sustainability assessment is therefore needed in order to support decision making at various level, trough comprehensive composite indicators. The present study develops a methodology for assessing the sustainability level of a technological/ operational options applied in a specific context, taking into account sustainability criteria. A comparison may be done among a number of different technologies to choose the best option in term of environmental, economic and social performance. A set of specific indicators is developed to assess the performance of a number of potential options for the implementation of forest biomass system exploitation.
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- 2011
38. Multidisciplinary sustainability evaluation of supply chains for forest resource use
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CASTELLANI, VALENTINA, MARTIRE, SALVATORE, SALA, SERENELLA, Castellani, V, Martire, S, and Sala, S
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BIO/07 - ECOLOGIA ,DSS, Decision Support System, forests, supply chain management - Abstract
The role of forests as important source of ecosystem services has been underlined by European policies. Particularly the “Forest Action Plan” specifies the necessity of contributing to economic, social and environmental wellness and increasing the competitiveness of the European forest sector, also through the promotion of forest biomass use for energy purpose. Within this scenario and criticality associated with it, this research aims to develop a Decision Support System (DSS) for wood fuel supply chains planning. It consists of a multidisciplinary set of indicators to assess the sustainability of the entire forest-wood-energy system. For the evaluation of each specific indicator, the methodology uses quantitative cardinal scales, tool for multi-criteria analysis application where all the indicators are related to a conventional scale with the aim at allowing comparability between different criteria and reducing heterogeneous measures to comparable values. The case study used to test the methodology consists of a short wood-energy chain aimed at use of forest biomass energy for heat production in the Mountain Community Lario Intelvese. In order to develop the set of indicators all the phases of the supply chain have been analyzed in detail, from the harvest of forest biomass to energy conversion technologies, considering the possible environmental and techno-economic constraints that can affect the implementation of each stage of which the chain is composed. The DSS is designed as a tool to provide detailed information about environmental, social and economic sustainability of different solutions as a support to decision making about supply chain planning. Final aim of this planning should be to balance among several forest ecosystem services, such as resources and habitat conservation and economic valorization of forest biomass. For instance, one crucial aspect is the trade-off between the necessity to respect the carrying capacity of the forest ecosystem and to obtain the minimum amount of biomass necessary to feed the heating plant.
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- 2011
39. Sustainability assessment of forest biomass supply chain at local scale: carrying capacity of the system for energy valorisation
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MARTIRE, SALVATORE, CASTELLANI, VALENTINA, SALA, SERENELLA, Martire, S, Castellani, V, and Sala, S
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BIO/07 - ECOLOGIA ,Energy planning, Forestry biomass, Spatial analysis, Carrying capacity - Abstract
Evaluation of the trade-off between the benefits coming from forest resources’ use and the conservation of forest ecosystems is needed. Considering the use of biomass for energy purpose, on one hand the use of wood resources should be based on an evaluation of the “carrying capacity” of the forest ecosystem and site-specific characteristics; on the other hand, the role of biomass valorisation has to be assessed considering the socio economic benefit or drawbacks due to the further development of the supply chain. In the context of a site –specific sustainability assessement of a wood energy supply chain, the research focuses on development of an expeditious methodology to obtain georeferred quantity of biomass at local scale for mountain forest areas, in order to facilitate energy planning that considers the local system carrying capacity and the potential of substitution of fossil fuels. Methodology developed for the site-specific assessment of the biomass availability, with respect to carrying capacity, consists of quantification and spatial distribution (using Geographic Information System) of forest biomass that considers local features as reported in local territorial plans and it applies Life Cycle Assessment for supporting the overall environmental assessment. Biomass value calculated has been converted from volume to mass, considering species features and water content. The result is compared with current utilization of wood, and waste products from forestry processing are estimated, in order to quantify the mass available for energy valorisation. Then, the energy potential is estimated, from biomass quantity and from wood features, principally the lower calorific value and water content for each species. Finally, the potential of substitution of fossil fuels is calculated, knowing energy potential from available biomass for energy use. The methodology is applied to two mountain areas, Comunità Montana Lario Intelvese (CMLI) and Comunità Montana Triangolo Lariano (CMTL), in northen Italy (Como Province). The proposed methodology evaluates the possibility that forests can provide the supply of raw material for energy production among ecosystem services. In addition, this assessment aims to integrate considerations to protect the other ecosystem services. Moreover, the proposed methodology is useful for a preliminary assessment of the possibility to considering woody biomass in energy planning at local level.
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- 2011
40. In multiple sclerosis patients a single serum neurofilament light chain (sNFL) dosage is strongly associated with 12 months outcome: data from a real-life clinical setting.
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Malucchi S, Bava CI, Valentino P, Martire S, Lo Re M, Bertolotto A, and Di Sapio A
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Background: Neurofilament light chain (NFL) is a neuroaxonal cytoskeletal protein released into cerebrospinal fluid (CSF) and eventually into blood upon neuronal injury. Its detection in serum (sNFL) makes it a promising marker in multiple sclerosis (MS)., Objective: To evaluate the usefulness of a single dosage of sNFL in clinical practice., Methods: 626 consecutive relapsing-remitting (RR) MS patients treated with disease modifying treatments (DMTs) for at least 12 months underwent a single sNFL dosage. 553 patients had NEDA-3 status (no relapses, no disability progression, no new/enlarging or contrast-enhancing lesions on brain magnetic resonance imaging) in the 12 months prior blood sampling. sNFL levels were measured by single molecule array (Simoa™). Association between sNFL levels and NEDA-3 status at 12, 24, and 36 months was evaluated with logistic regression models adjusted for sex, EDSS, disease duration, and type of DMTs., Results: 469 out of the 553 NEDA-3 patients had normal sNFL level, whereas 42 had elevated level. The two groups did not differ regarding baseline characteristics. A very strong association between elevated sNFL levels and loss of NEDA-3 status within 12 months was found, with an odds ratio [OR] of 10.74 (95% CI 4.34-26.57); 15 and 10 patients with normal and elevated sNFL, respectively lost NEDA-3 (p < 0.001). The effect was not detected during the subsequent 13-24 and 25-36 months., Conclusions: A single elevated sNFL is strongly associated with NEDA-3 loss within 1 year. Elevated sNFL in apparently stable patients suggests an ongoing disease activity below the detection threshold of standard parameters., (© 2024. Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2024
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41. G1 length dictates H3K27me3 landscapes.
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Trouth A, Ravichandran K, Gafken PR, Martire S, Boyle GE, Veronezi GMB, La V, Namciu SJ, Banaszynski LA, Sarthy JF, and Ramachandran S
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Stem cells have lower facultative heterochromatin as defined by trimethylation of histone H3 lysine 27 (H3K27me3) compared to differentiated cells. However, the mechanisms underlying these differential H3K27me3 levels remain elusive. Because H3K27me3 levels are diluted two-fold in every round of replication and then restored through the rest of the cell cycle, we reasoned that the cell cycle length could be a key regulator of total H3K27me3 levels. Here, we propose that a fast cell cycle restricts H3K27me3 levels in stem cells. To test this model, we determined changes to H3K27me3 levels in mESCs globally and at specific loci upon G1 phase lengthening - accomplished by thymidine block or growth in the absence of serum (with the "2i medium"). H3K27me3 levels in mESC increase with G1 arrest when grown in serum and in 2i medium. Additionally, we observed via CUT&RUN and ChIP-seq that regions that gain H3K27me3 in G1 arrest and 2i media overlap, supporting our model of cell cycle length as a critical regulator of the stem cell epigenome and cellular identity. Furthermore, we demonstrate the inverse effect - that G1 shortening in differentiated cells results in a loss of H3K27me3 levels. Finally, in tumor cells with extreme H3K27me3 loss, lengthening of the G1 phase leads to H3K27me3 recovery despite the presence of the dominant negative, sub-stoichiometric H3.1K27M mutation. Our results indicate that G1 length is an essential determinant of H3K27me3 landscapes across diverse cell types.
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- 2024
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42. Prevalence of elevated sNFL in a real-world setting: Results on 908 patients with different multiple sclerosis types and treatment conditions.
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Bava CI, Valentino P, Malucchi S, Bottero R, Martire S, Sapio AD, and Bertolotto A
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- Humans, Female, Male, Adult, Cross-Sectional Studies, Middle Aged, Prevalence, Biomarkers blood, Young Adult, Multiple Sclerosis, Relapsing-Remitting blood, Multiple Sclerosis, Relapsing-Remitting drug therapy, Multiple Sclerosis, Relapsing-Remitting epidemiology, Multiple Sclerosis blood, Multiple Sclerosis drug therapy, Multiple Sclerosis epidemiology, Aged, Immunosuppressive Agents therapeutic use, Toluidines therapeutic use, Crotonates therapeutic use, Adolescent, Neurofilament Proteins blood, Multiple Sclerosis, Chronic Progressive blood, Multiple Sclerosis, Chronic Progressive drug therapy, Multiple Sclerosis, Chronic Progressive epidemiology
- Abstract
Background: In the field of research for new validated surrogate biomarkers of treatment efficacy, disease activity and progression in Multiple Sclerosis (MS), serum neurofilament light-chain (sNFL) are actually the best candidate for MS patient monitoring. However, before they can be implemented in clinical practice, their usefulness as additional red flag routine measure must be demonstrated. To tackle the problem, this real-life cross-sectional study at the Regional Referring Center for Multiple Sclerosis (CRESM) aims to characterize sNFL levels and prevalence of elevated sNFL, according to our age-dependent cut-off values, in a large group of patients with different types of MS and treatment conditions., Methods: 908 serum samples from as many MS patients being admitted at CRESM for diagnostic definition and/or during routinary treatment monitoring were consecutively collected between January 2019 and January 2020. sNFL levels were measured by single molecule array (Simoa™) technology on SR-X instrument using NF-light assays (Quanterix); results were interpreted using previously published cut-off values., Results: Primary and Secondary Progressive MS (PPMS, SPMS) forms demonstrate higher levels and prevalence of elevated sNFL (PPMS= 32 %, SPMS= 21 %) compared to the Relapse and Remitting one (RRMS = 12 %). Besides, naïve samples of RRMS and PPMS subtypes showed higher prevalence of elevated sNFL (RRMS naïve= 31 %, PPMS naïve=67 %) compared to samples from patients treated for more than 12 months (RRMS treat>12m= 9 %, PPMS treat>12m= 19 %); treated SPMS patients demonstrated higher sNFL levels and a prevalence (22 %) of elevated sNFL compared to RRMS treated patients. Focusing on RRMS, no statistical difference was found between groups of patients treated for whatever time (up to or more than 60 months) and with either DMT type (high or low-efficacy DMT). Finally, RRMS patients treated with all DMTs for more than 12 months, with the exception of teriflunomide and alemtuzumab showed a prevalence of elevated sNFL in the range of 5-10 %., Conclusion: in a real-world setting comprising about 1000 MS patients, sNFL quantification was elevated in 5-to-67 % of patients, in different MS forms and treatment conditions. Elevated levels of sNFL must be considered a red-flag suggesting the need of a further clinical monitoring in any circumstance, as it can be indicative of new inflammation, ongoing degeneration or co-morbidities. This study supports the introduction of sNFL quantification in everyday patient management., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Antonio Bertolotto reports financial support was provided by Roche SpA. Antonio Bertolotto reports financial support was provided by Italian Multiple Sclerosis Association. Paola Valentino reports a relationship with Biogen that includes: speaking and lecture fees and travel reimbursement. Paola Valentino reports a relationship with Novartis that includes: speaking and lecture fees and travel reimbursement. Paola Valentino reports a relationship with Roche SpA that includes: speaking and lecture fees and travel reimbursement. Paola Valentino reports a relationship with Merck & Co Inc that includes: funding grants. Paola Valentino reports a relationship with Quanterix Corp that includes: funding grants. Simona Malucchi reports a relationship with Biogen that includes: speaking and lecture fees and travel reimbursement. Simona Malucchi reports a relationship with Merck & Co Inc that includes: speaking and lecture fees and travel reimbursement. Simona Malucchi reports a relationship with Novartis that includes: speaking and lecture fees and travel reimbursement. Simona Malucchi reports a relationship with Roche SpA that includes: speaking and lecture fees and travel reimbursement. Serena Martire reports a relationship with Biogen that includes: board membership, consulting or advisory, speaking and lecture fees, and travel reimbursement. Serena Martire reports a relationship with Novartis that includes: board membership, consulting or advisory, speaking and lecture fees, and travel reimbursement. Antonio Bertolotto reports a relationship with Almirall that includes: board membership, consulting or advisory, and funding grants. Antonio Bertolotto reports a relationship with Bayer that includes: board membership and consulting or advisory. Antonio Bertolotto reports a relationship with Biogen that includes: board membership, consulting or advisory, funding grants, speaking and lecture fees, and travel reimbursement. Antonio Bertolotto reports a relationship with Genzyme Corporation that includes: board membership and consulting or advisory. Antonio Bertolotto reports a relationship with Novartis that includes: funding grants, speaking and lecture fees, and travel reimbursement. Antonio Bertolotto reports a relationship with Sanofi that includes: speaking and lecture fees and travel reimbursement. Antonio Bertolotto reports a relationship with Associazione San Luigi Gonzaga ONLUS that includes: funding grants. Antonio Bertolotto reports a relationship with Fondazione per la Ricerca Biomedica ONLUS that includes: funding grants. Antonio Bertolotto reports a relationship with Mylan Pharmaceuticals Inc that includes: funding grants. Antonio Bertolotto reports a relationship with Italian Multiple Sclerosis Association that includes: funding grants. Rugiada Bottero reports a relationship with Novartis that includes: consulting or advisory. Rugiada Bottero reports a relationship with Sanofi that includes: consulting or advisory. Rugiada Bottero reports a relationship with Merck that includes: consulting or advisory. Alessia Di Sapio reports a relationship with Biogen that includes: consulting or advisory, speaking and lecture fees, and travel reimbursement. Alessia Di Sapio reports a relationship with Novartis that includes: consulting or advisory, speaking and lecture fees, and travel reimbursement. Alessia Di Sapio reports a relationship with Roche that includes: consulting or advisory, speaking and lecture fees, and travel reimbursement. Alessia Di Sapio reports a relationship with Sanofi that includes: consulting or advisory, speaking and lecture fees, and travel reimbursement. Alessia Di Sapio reports a relationship with Alexion that includes: speaking and lecture fees and travel reimbursement. Alessia Di Sapio reports a relationship with Merck that includes: travel reimbursement. Alessia Di Sapio reports a relationship with Genzyme Corporation that includes: travel reimbursement. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)
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- 2024
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43. OBIWAN: An Element-Wise Scalable Feed-Forward Neural Network Potential.
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Martire S, Decherchi S, and Cavalli A
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Estimating the potential energy of a molecular system at a quantum level of theory is a task of paramount importance in computational chemistry. The often employed density functional theory approach allows one to accomplish this task, yet most often at significant computational costs. This prompted the community to develop so-called machine learning potentials to achieve near-quantum accuracy at molecular mechanics computational cost. In this paper, we introduce OBIWAN, a feed-forward neural network that bears some relevant structural properties that also led to the definition of a new kind of general-purpose neural network layer. Its featurization process scales efficiently with newly added atomic species. This allows one to seamlessly add new atom types without requiring to change the topology of the network. Also, this allows one to train on new data sets leveraging a previously trained OBIWAN, hence converging very quickly. This avoids training from scratch and renders the approach more compliant with a green computing perspective.
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- 2024
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44. Tailoring Rituximab According to CD27-Positive B-Cell versus CD19-Positive B-Cell Monitoring in Neuromyelitis Optica Spectrum Disorder and MOG-Associated Disease: Results from a Single-Center Study.
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Bruschi N, Malentacchi M, Malucchi S, Sperli F, Martire S, Sala A, Valentino P, Bertolotto A, Pautasso M, and Capobianco MA
- Abstract
Introduction: B-cell-depleting agents have been widely used for neuromyelitis optica spectrum disorder (NMOSD) and MOG-associated diseases (MOGAD), but no consensus exists on the optimal dose and frequency of treatment administration. The aim of our study was to evaluate the effect of a Rituximab (RTX) personalized treatment approach based on CD27-positive B-cell monitoring on efficacy, safety, and infusion rates., Methods: This is a retrospective, uncontrolled, single-center study including patients with NMOSD and MOGAD treated with RTX at a tertiary multiple sclerosis center at the San Luigi University Hospital, Orbassano, Italy. All the patients were treated with RTX induction, followed by maintenance infusion at the dosage of 1000 mg according to cell repopulation: initially according to total CD19-positive B-cell monitoring (> 0.1% of lymphocytes), and subsequently according to CD27-positive B-cell repopulation (> 0.05% of lymphocytes for the first 2 years, and subsequently > 0.1%). NMOSD and MOGAD activity was assessed as clinical or MRI activity. All patients were screened of the occurrence of severe adverse events (AEs)., Results: A total of 19 patients were included in the analysis. Median follow-up was 7.64 years (range 3.09-16.25). The annualized relapse rate (ARR) 1 year before RTX start was 2.37 [Standard deviation (SD), 1.34] and decreased to 0.08 (SD 0.11) in the subsequent years after RTX initiation. ARR did not differ before and after start of CD27 monitoring. Median inter-dose time was 8.80 (range 5.78-14.23) before CD27 monitoring and 15.93 months (range 8.56-35.37) after CD27 monitoring (p < 0.001). We observed no AEs., Conclusion: Our findings suggest that in our cohort CD27-positive B-cell-based RTX reinfusion regimen was able to reduce the number of RTX reinfusions relative to CD19-positive B-cell monitoring, with comparable efficacy and safety profile. In order to achieve an even more individualized and effective treatment, the FCGR3A genetic polymorphisms could be evaluated when assessing RTX efficacy., (© 2023. The Author(s).)
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- 2023
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45. PASK links cellular energy metabolism with a mitotic self-renewal network to establish differentiation competence.
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Xiao M, Wu CH, Meek G, Kelly B, Castillo DB, Young LEA, Martire S, Dhungel S, McCauley E, Saha P, Dube AL, Gentry MS, Banaszynski LA, Sun RC, and Kikani CK
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- Animals, Mice, Cell Differentiation physiology, Cells, Cultured, Energy Metabolism, Glutamine, Stem Cells physiology
- Abstract
Quiescent stem cells are activated in response to a mechanical or chemical injury to their tissue niche. Activated cells rapidly generate a heterogeneous progenitor population that regenerates the damaged tissues. While the transcriptional cadence that generates heterogeneity is known, the metabolic pathways influencing the transcriptional machinery to establish a heterogeneous progenitor population remains unclear. Here, we describe a novel pathway downstream of mitochondrial glutamine metabolism that confers stem cell heterogeneity and establishes differentiation competence by countering post-mitotic self-renewal machinery. We discovered that mitochondrial glutamine metabolism induces CBP/EP300-dependent acetylation of stem cell-specific kinase, PAS domain-containing kinase (PASK), resulting in its release from cytoplasmic granules and subsequent nuclear migration. In the nucleus, PASK catalytically outcompetes mitotic WDR5-anaphase-promoting complex/cyclosome (APC/C) interaction resulting in the loss of post-mitotic Pax7 expression and exit from self-renewal. In concordance with these findings, genetic or pharmacological inhibition of PASK or glutamine metabolism upregulated Pax7 expression, reduced stem cell heterogeneity , and blocked myogenesis in vitro and muscle regeneration in mice. These results explain a mechanism whereby stem cells co-opt the proliferative functions of glutamine metabolism to generate transcriptional heterogeneity and establish differentiation competence by countering the mitotic self-renewal network via nuclear PASK., Competing Interests: MX, CW, GM, BK, DC, LY, SM, SD, EM, PS, AD, MG, LB, RS, CK No competing interests declared, (© 2023, Xiao, Wu, Meek et al.)
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- 2023
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46. H3.3 contributes to chromatin accessibility and transcription factor binding at promoter-proximal regulatory elements in embryonic stem cells.
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Tafessu A, O'Hara R, Martire S, Dube AL, Saha P, Gant VU, and Banaszynski LA
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- Animals, Mice, Acetylation, Embryonic Stem Cells metabolism, Lysine metabolism, Nuclear Proteins genetics, Transcription Factors metabolism, Chromatin metabolism, Histones metabolism
- Abstract
Background: The histone variant H3.3 is enriched at active regulatory elements such as promoters and enhancers in mammalian genomes. These regions are highly accessible, creating an environment that is permissive to transcription factor binding and the recruitment of transcriptional coactivators that establish a unique chromatin post-translational landscape. How H3.3 contributes to the establishment and function of chromatin states at these regions is poorly understood., Results: We perform genomic analyses of features associated with active promoter chromatin in mouse embryonic stem cells (ESCs) and find evidence of subtle yet widespread promoter dysregulation in the absence of H3.3. Loss of H3.3 results in reduced chromatin accessibility and transcription factor (TF) binding at promoters of expressed genes in ESCs. Likewise, enrichment of the transcriptional coactivator p300 and downstream histone H3 acetylation at lysine 27 (H3K27ac) is reduced at promoters in the absence of H3.3, along with reduced enrichment of the acetyl lysine reader BRD4. Despite the observed chromatin dysregulation, H3.3 KO ESCs maintain transcription from ESC-specific genes. However, upon undirected differentiation, H3.3 KO cells retain footprinting of ESC-specific TF motifs and fail to generate footprints of lineage-specific TF motifs, in line with their diminished capacity to differentiate., Conclusions: H3.3 facilitates DNA accessibility, transcription factor binding, and histone post-translational modification at active promoters. While H3.3 is not required for maintaining transcription in ESCs, it does promote de novo transcription factor binding which may contribute to the dysregulation of cellular differentiation in the absence of H3.3., (© 2023. The Author(s).)
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- 2023
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47. sNFL applicability as additional monitoring tool in natalizumab extended interval dosing regimen for RRMS patients.
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Valentino P, Malucchi S, Martire S, Bava CI, Capobianco MA, and Bertolotto A
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- Adolescent, Adult, Humans, Middle Aged, Young Adult, Biomarkers, Natalizumab, Leukoencephalopathy, Progressive Multifocal, Multiple Sclerosis drug therapy, Multiple Sclerosis, Relapsing-Remitting diagnostic imaging, Multiple Sclerosis, Relapsing-Remitting drug therapy
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Introduction: Extended interval dosing (EID) of Natalizumab (NAT) has been proposed to reduce progressive multifocal leukoencephalopathy (PML) risk associated with standard interval dosing (SID) in people with multiple sclerosis (MS). Previous studies have suggested that NAT effectiveness is maintained in the great majority of patients who switch from SID to EID; monitoring of disease activity is currently based exclusively on clinical and MRI parameters. Frequent MRI are expensive and not always applicable, underlining the need for biological markers able to detect central nervous system lesions. Serum Neurofilament-light chain (sNFL) currently represents the most promising biomarker of disease activity, prognosis and treatment response in MS, and their clinical suitability is increasingly evident. The objective of the present study is to assess the applicability of sNFL as additional/alternative measure of treatment efficacy during EID regimen., Methods: We measured sNFL by Simoa technology in longitudinal samples from 63 Relapsing Remitting (RR) MS patients switched from SID to EID., Inclusion Criteria: diagnosis of RRMS, age 18-60 years; NAT SID for at least 12 months; NEDA-3 (no evidence of disease activity) for at least 12 months; availability of at least 2 serum samples collected 6 months apart. Patients' follow-up time during EID was at least 12 months and 2 blood samples were collected after at least 6 and 12 months. Clinical examination was performed before each infusion, while MRI 6 and 12 months after NAT initiation and according to PML risk during the whole study., Results: No patients showed clinical or MRI activity during the whole follow-up. sNFL levels measured during SID and EID were comparable, without significant difference between groups. The effect of EID on NFL levels did not show significant effects (LMM, p> 0.05) and sNFL levels did not vary with time during SID or EID protocols (LMM, p> 0.05). Intra-individual sNFL levels demonstrated overall stability during SID and EID (median CV=11% between SID and EID samples). According to our previously published reference values, sNFL levels were in the normal range in all samples, both during SID and EID., Conclusions: Our results suggest that sNFL quantification can be used as an alternative/additional approach to MRI in managing individual patients. The present work provides a new clinical application of sNFL to monitor NAT efficacy., Competing Interests: Declaration of Competing Interest Valentino Paola received speaker honoraria from Biogen, Novartis and Roche, research support from Merck and grant support from Quanterix. Malucchi Simona received speaker honoraria from Biogen. Martire Serena received speaker honoraria from Biogen and Novartis and served on the advisory boards of Biogen and Novartis Bava Cecilia Irene: nothing to discose Capobianco Marco served on the scientific advisory board of Biogen, Sanofi Genzyme, Novartis, and Bayer Schering and received speaker honoraria from Almirall, Biogen, Novartis, Sanofi Genzyme, and Teva. Bertolotto Antonio served on the scientific advisory board of Almirall, Bayer, Biogen, and Genzyme; received speaker honoraria from Biogen, Novartis and Sanofi and grant support from Almiral, Biogen, Associazione San Luigi Gonzaga ONLUS, Fondazione per la Ricerca Biomedica ONLUS, Mylan, Novartis and the Italian Multiple sclerosis Society., (Copyright © 2022. Published by Elsevier B.V.)
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- 2022
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48. NURR1-deficient mice have age- and sex-specific behavioral phenotypes.
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Montarolo F, Martire S, Chiara F, Allegra S, De Francia S, Hoxha E, Tempia F, Capobianco MA, and Bertolotto A
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- Animals, Dopamine metabolism, Dopaminergic Neurons metabolism, Female, Male, Mice, Mice, Knockout, Phenotype, Transcription Factors genetics, Transcription Factors metabolism, Nuclear Receptor Subfamily 4, Group A, Member 2 genetics, Parkinson Disease metabolism
- Abstract
The transcription factor NURR1 is essential to the generation and maintenance of midbrain dopaminergic (mDA) neurons and its deregulation is involved in the development of dopamine (DA)-associated brain disorders, such as Parkinson's disease (PD). The old male NURR1 heterozygous knockout (NURR1-KO) mouse has been proposed as a model of PD due to its altered motor performance that was, however, not confirmed in a subsequent study. Based on these controversial results, we explored the effects of the NURR1 deficiency on locomotor activity, motor coordination, brain and plasma DA levels, blood pressure and heart rate of old mice, also focusing on the potential effect of sex. As a probable consequence of the role of NURR1 in DA pathway, we observed that the old NURR1-KO mouse is characterized by motor impairment, and increased brain DA level and heart rate, independently from sex. However, we also observed an alteration in spontaneous locomotor activity that only affects males. In conclusion, NURR1 deficiency triggers sex- and age-specific alterations of behavioral responses, of DA levels and cardiovascular abnormalities. Further studies in simplified systems will be necessary to dissect the mechanism underlying these observations., (© 2022 The Authors. Journal of Neuroscience Research published by Wiley Periodicals LLC.)
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- 2022
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49. Oncohistone Mutations Occur at Functional Sites of Regulatory ADP-Ribosylation.
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Huang D, Camacho CV, Martire S, Nagari A, Setlem R, Gong X, Edwards AD, Chiu SP, Banaszynski LA, and Kraus WL
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- ADP-Ribosylation genetics, Acetylation, Animals, Humans, Mice, Mutation, Proteomics, Histones metabolism, Neoplasms genetics
- Abstract
Recent studies have identified cancer-associated mutations in histone genes that lead to the expression of mutant versions of core histones called oncohistones. Many oncohistone mutations occur at Asp and Glu residues, two amino acids known to be ADP-ribosylated (ADPRylated) by PARP1. We screened 25 Glu or Asp oncohistone mutants for their effects on cell growth in breast and ovarian cancer cells. Ectopic expression of six mutants of three different core histones (H2B, H3, and H4) altered cell growth in at least two different cell lines. Two of these sites, H2B-D51 and H4-D68, were indeed sites of ADPRylation in wild-type (unmutated) histones, and mutation of these sites inhibited ADPRylation. Mutation of H2B-D51 dramatically altered chromatin accessibility at enhancers and promoters, as well as gene expression outcomes, whereas mutation of H4-D68 did not. Additional biochemical, cellular, proteomic, and genomic analyses demonstrated that ADPRylation of H2B-D51 inhibits p300-mediated acetylation of H2B at many Lys residues. In breast cancer cell xenografts in mice, H2B-D51A promoted tumor growth, but did not confer resistance to the cytotoxic effects of PARP inhibition. Collectively, these results demonstrate that functional Asp and Glu ADPRylation sites on histones are mutated in cancers, allowing cancer cells to escape the growth-regulating effects of post-translational modifications via distinct mechanisms., Significance: This study identifies cancer-driving mutations in histones as sites of PARP1-mediated ADP-ribosylation in breast and ovarian cancers, providing a molecular pathway by which cancers may subvert the growth-regulating effects of PARP1., (©2022 American Association for Cancer Research.)
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- 2022
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50. The impact of pre-freezing storage time and temperature on gene expression of blood collected in EDTA tubes.
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Martire S, Valentino P, Marnetto F, Mirabile L, Capobianco M, and Bertolotto A
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- Edetic Acid metabolism, Freezing, Gene Expression, Temperature, Leukocytes, Mononuclear metabolism, RNA metabolism
- Abstract
Background: Blood is a common source of RNA for gene expression studies. However, it is known to be vulnerable to pre-analytical variables. Although RNA stabilization systems have been shown to reduce such influence, traditional EDTA tubes are still widely used since they are less expensive and enable to study specific leukocyte populations. This study aimed to assess the influence of storage time and temperature between blood sampling and handling on RNA from peripheral blood mononuclear cells (PBMCs)., Methods and Results: Nine blood samples were collected in EDTA tubes from 10 healthy donors. One tube from each donor was immediately processed for PBMC isolation, while the others were first incubated at either 4 degrees Celsius (°C) or room temperature for 2, 4, 6 and 24 h. RNA yield and quality and the expression level of fourt housekeeping (B2M, CASC3, GAPDH, HPRT1) and 8 target genes (CD14, CD19, CD20, IL10, MxA, TNF, TNFAIP3, NR4A2) were compared between samples. RNA yield, quality and integrity did not vary significantly with time and temperature. B2M was the most stable housekeeping gene, while the others were increasingly influenced by storing time, especially at 4 °C. Even when normalized to B2M, the expression level of some target genes, particularly TNFAIP3 and NR4A2, was highly affected by delays in blood processing at either temperature, already from 2 h., Conclusion: Pre-analytical processing has a great impact on transcript expression from blood collected in EDTA tubes, especially on genes related to inflammation. Standardized procedure of blood handling are needed to obtain reliable results., (© 2022. The Author(s).)
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- 2022
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