551 results on '"Marti-Renom, Marc A"'
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2. LATS1 controls CTCF chromatin occupancy and hormonal response of 3D-grown breast cancer cells
3. Principles of 3D chromosome folding and evolutionary genome reshuffling in mammals
4. Insights into the mechanisms underlying aberrant SOX11 oncogene expression in mantle cell lymphoma
5. Three-dimensional genome organization via triplex-forming RNAs
6. 4D nucleome modeling
7. 4D Genome Rewiring during Oncogene-Induced and Replicative Senescence
8. LifeTime and improving European healthcare through cell-based interceptive medicine
9. CHESS enables quantitative comparison of chromatin contact data and automatic feature extraction
10. 3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing
11. CTCF is dispensable for immune cell transdifferentiation but facilitates an acute inflammatory response
12. Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop.
13. Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation
14. The impact of chromosomal fusions on 3D genome folding and recombination in the germ line
15. Three-Dimensional Genomic Structure and Cohesin Occupancy Correlate with Transcriptional Activity during Spermatogenesis
16. Specific Contributions of Cohesin-SA1 and Cohesin-SA2 to TADs and Polycomb Domains in Embryonic Stem Cells
17. Communicating Genome Architecture: Biovisualization of the Genome, from Data Analysis and Hypothesis Generation to Communication and Learning
18. Analysis, Modeling, and Visualization of Chromosome Conformation Capture Experiments
19. Human pancreatic islet three-dimensional chromatin architecture provides insights into the genetics of type 2 diabetes
20. RNA proximity sequencing reveals the spatial organization of the transcriptome in the nucleus
21. Target prediction for an open access set of compounds active against Mycobacterium tuberculosis.
22. Detecting Remotely Related Proteins by Their Interactions and Sequence Similarity
23. The Hippo kinase LATS1 controls CTCF chromatin occupancy and the hormonal response of three-dimensionally grown breast cancer cells
24. Enhancer-driven 3D chromatin domain folding modulates transcription in human mammary tumor cells
25. A Kernel for Open Source Drug Discovery in Tropical Diseases
26. MODBASE, a database of annotated comparative protein structure models and associated resources.
27. Muscle progenitor specification and myogenic differentiation are associated with changes in chromatin topology
28. MODBASE, a database of annotated comparative protein structure models, and associated resources
29. Benchmarking experiments with polymer modeling
30. Promoter bivalency favors an open chromatin architecture in embryonic stem cells
31. Challenges and guidelines toward 4D nucleome data and model standards
32. Distinct roles of cohesin-SA1 and cohesin-SA2 in 3D chromosome organization
33. TADs without borders
34. Restraint-Based Modeling of Genomes and Genomic Domains
35. Binless normalization of Hi-C data provides significant interaction and difference detection independent of resolution
36. Enhancer-driven 3D chromatin domain folding modulates transcription in human mammary tumor cells.
37. Supplementary Figure 1 from Structure-Based Assessment of Missense Mutations in Human BRCA1
38. Data from Structure-Based Assessment of Missense Mutations in Human BRCA1
39. The anti-immune dengue subgenomic flaviviral RNA is present in vesicles in mosquito saliva and is associated with increased infectivity
40. The Conformation of Yeast Chromosome III Is Mating Type Dependent and Controlled by the Recombination Enhancer
41. On the demultiplexing of chromosome capture conformation data
42. Restraint-based three-dimensional modeling of genomes and genomic domains
43. Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming
44. Modeling of RNA Molecules
45. Lamin B1 mapping reveals the existence of dynamic and functional euchromatin lamin B1 domains
46. Comparative Protein Structure Modeling
47. Sex-determining 3D regulatory hubs revealed by genome spatial auto-correlation analysis
48. Probabilistic 3D-modelling of genomes and genomic domains by integrating high-throughput imaging and Hi-C using machine learning
49. A Novel Family of Soluble Minimal Scaffolds Provides Structural Insight into the Catalytic Domains of Integral Membrane Metallopeptidases
50. Challenges for visualizing three‐dimensional data in genomic browsers
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