Search

Social interactions ultimately impact health and fitness in gregarious mammals. However, research focusing on the strength of affiliative interactions has primarily been conducted on female philopatric species. Gorillas provide an interesting counterpoint to previous research as females emigrate multiple times throughout their lives. We compare female–female association strength, duration and consistency in wild mountain ( Gorilla beringei beringei ) and western gorillas ( Gorilla gorilla gorilla ). Additionally, we examine whether the alpha male influences female association strength and if these associations are an artefact of both females concurrently in spatial proximity of the alpha male. In this between-species comparison, female gorillas had differentiated association patterns that were consistent on average for 2 years. The alpha males did not influence female association strength, with associations being similar in his presence or absence. Finally, we found more variability in association patterns among mountain gorillas with higher average association scores and higher proportion of ‘preferred associates' than western gorillas. The rare dispersal pattern in the Gorilla genus may lead to greater flexibility in female association patterns than in species exhibiting female philopatry and strong kinship bonds. This may echo ancestral human society and provide new evidence to help us understand the evolution of modern human society. This article is part of the theme issue ‘Cooperation among women: evolutionary and cross-cultural perspectives’.

Is it possible to slow the rate of ageing, or do biological constraints limit its plasticity? We test the ‘invariant rate of ageing’ hypothesis, which posits that the rate of ageing is relatively fixed within species, with a collection of 39 human and nonhuman primate datasets across seven genera. We first recapitulate, in nonhuman primates, the highly regular relationship between life expectancy and lifespan equality seen in humans. We next demonstrate that variation in the rate of ageing within genera is orders of magnitude smaller than variation in pre-adult and age-independent mortality. Finally, we demonstrate that changes in the rate of ageing, but not other mortality parameters, produce striking, species-atypical changes in mortality patterns. Our results support the invariant rate of ageing hypothesis, implying biological constraints on how much the human rate of ageing can be slowed., The ‘invariant rate of ageing’ hypothesis suggests that the rate of ageing tends to be constant within species. Here, Colchero et al. find support for the hypothesis across primates, including humans, suggesting biological constraints on the rate of ageing.

Acoustic signals that reliably indicate body size, which usually determines competitive ability, are of particular interest for understanding how animals assess rivals and choose mates. Whereas body size tends to be negatively associated with formant dispersion in animal vocalizations, non-vocal signals have received little attention. Among the most emblematic sounds in the animal kingdom is the chest beat of gorillas, a non-vocal signal that is thought to be important in intra and inter-sexual competition, yet it is unclear whether it reliably indicates body size. We examined the relationship among body size (back breadth), peak frequency, and three temporal characteristics of the chest beat: duration, number of beats and beat rate from sound recordings of wild adult male mountain gorillas. Using linear mixed models, we found that larger males had significantly lower peak frequencies than smaller ones, but we found no consistent relationship between body size and the temporal characteristics measured. Taken together with earlier findings of positive correlations among male body size, dominance rank and reproductive success, we conclude that the gorilla chest beat is an honest signal of competitive ability. These results emphasize the potential of non-vocal signals to convey important information in mammal communication.

OBJECTIVES Weaning is a key life history milestone for mammals that represents both the end of nutritional investment from the perspective of mothers and the start of complete nutritional independence for the infants. The age at weaning may vary depending on ecological, social, and demographic factors experienced by the mother and infant. Bwindi mountain gorillas live in different environmental conditions and have longer interbirth intervals than their counterparts in the Virunga Volcanoes, yet other life history characteristics of this population remain less well known. We use long-term data from Bwindi Impenetrable National Park, Uganda to examine factors related to weaning age. MATERIALS AND METHODS We analyzed data on infants born in four mountain gorilla groups in Bwindi to quantify their age of weaning (defined as last nipple contact) and to test if the sex of offspring, parity, and dominance rank of mother influences age of weaning. We also compared the age at weaning and time to conception after resumption of mating in Bwindi and Virunga gorillas. RESULTS Bwindi gorillas were weaned at an average age of 57.5 months. No difference was found between age of weaning for primiparous and multiparous mothers, nor did maternal dominance rank influence age of weaning, but sons were weaned at a later age than daughters. The majority of Bwindi mothers were still suckling when they resumed mating and mothers generally conceived before they weaned their previous offspring. The age of weaning was significantly later in Bwindi than in Virunga gorillas. After mothers resumed mating, the time to conceiving the next offspring was not significantly longer for Bwindi females than Virungas females (6 vs. 4 months). DISCUSSION Later weaning age for sons than daughters is similar to findings of other studies of great apes. Bwindi mountain gorillas are weaned at approximately the same age as western gorillas and chimpanzees, which is more than a year later than Virunga mountain gorillas. The results of this study suggest that variation in ecological conditions of populations living in close geographic proximity can result in variation in life history patterns, which has implications for understanding the evolution of the unique life history patterns of humans.

Studies of the evolutionary relationships among gorilla populations using autosomal and mitochondrial sequences suggest that male-mediated gene flow may have been important in the past, but data on the Y-chromosomal relationships among the gorilla subspecies are limited. Here, we genotyped blood and noninvasively collected fecal samples from 12 captives and 257 wild male gorillas of known origin representing all four subspecies (Gorilla gorilla gorilla, G. g. diehli, G. beringei beringei, and G. b. graueri) at 10 Y-linked microsatellite loci resulting in 102 unique Y-haplotypes for 224 individuals. We found that western lowland gorilla (G. g. gorilla) haplotypes were consistently more diverse than any other subspecies for all measures of diversity and comprised several genetically distinct groups. However, these did not correspond to geographical proximity and some closely related haplotypes were found several hundred kilometers apart. Similarly, our broad sampling of eastern gorillas revealed that mountain (G. b. beringei) and Grauer's (G. b. graueri) gorilla Y-chromosomal haplotypes did not form distinct clusters. These observations suggest structure in the ancestral population with subsequent mixing of differentiated haplotypes by male dispersal for western lowland gorillas, and postisolation migration or incomplete lineage sorting due to short divergence times for eastern gorillas.

In many social species, after the alpha male has been replaced or the group disintegrates, a female’s infant is at risk of infanticide by a male. Female gorillas have developed the rare strategy of secondary dispersal in which they transfer between reproductive groups during the limited time period between weaning an infant and conceiving the next one (voluntary dispersal). By doing so they leave a weaker silverback near the end of his tenure and join a stronger silverback at an earlier stage of his own tenure, thereby mitigating the risk of infanticide if the former dies. If females are pregnant or have unweaned offspring when the only male in the group dies, their offspring are vulnerable to infanticide by the new silverback that they join (via involuntary dispersal). In the few known cases of female gorillas transferring when pregnant (mainly after group disintegration), their offspring were killed. We report here on three adult females that transferred voluntarily while pregnant multiple times between two groups yet their offspring were not killed by the new group’s silverback. The gorillas were observed from 1995 to 2015 at the Mbeli Bai research site in northern Republic of the Congo. The females gave birth 5–6 months (gestation period 8.5 months) after their last transfer. To our knowledge, these observations are the first to show that wild female western lowland gorillas can transfer voluntarily while pregnant without incurring infanticide by a new silverback. These observations highlight the behavioural plasticity shown by female gorillas in response to sexual coercion by males. Electronic supplementary material The online version of this article (10.1007/s10329-020-00844-z) contains supplementary material, which is available to authorized users.

Spatial and temporal variability in the availability of food resources will lead to variation in a species’ diet, which can then influence patterns of space use, sociality, and life history characteristics. Despite such potential impacts, little information is available about dietary variability for some species with large geographical ranges. Here we quantify the diet and nutritional content of plants consumed by western lowland gorillas (Gorilla gorilla gorilla) in Loango National Park, Gabon over a 2.6 year period and make comparisons with two study sites located 800 km away. The major foods consumed by the Loango gorillas differed greatly from the other two study sites, but gorillas at all three locations spent a similar proportion of feeding time consuming herbaceous vegetation and tree leaves (~ 50%) and fruit (35%). The Loango gorillas spent approximately 10% of feeding time eating nuts, which were not consumed at the other two study sites. Gorillas at those sites spent about 5% of feeding time eating insects, which were not consumed by Loango gorillas. Even though the species composition of the diet differed among the three sites, the nutritional composition of the major food items differed very little, suggesting that western gorillas consume foods of similar nutritional values to meet their dietary needs. This study shows the flexibility of diet of a species with a wide geographic distribution, which has implications for understanding variation in life history characteristics and can be useful for conservation management plans.

Animal communication has long been thought to be subject to pressures and constraints associated with social relationships. However, our understanding of how the nature and quality of social relationships relates to the use and evolution of communication is limited by a lack of directly comparable methods across multiple levels of analysis. Here, we analysed observational data from 111 wild groups belonging to 26 non-human primate species, to test how vocal communication relates to dominance style (the strictness with which a dominance hierarchy is enforced, ranging from 'despotic' to 'tolerant'). At the individual-level, we found that dominant individuals who were more tolerant vocalized at a higher rate than their despotic counterparts. This indicates that tolerance within a relationship may place pressure on the dominant partner to communicate more during social interactions. At the species-level, however, despotic species exhibited a larger repertoire of hierarchy-related vocalizations than their tolerant counterparts. Findings suggest primate signals are used and evolve in tandem with the nature of interactions that characterize individuals' social relationships. Publisher PDF

Viruses closely related to human pathogens can reveal the origins of human infectious diseases. Human herpes simplexvirus type 1 (HSV-1) and type 2 (HSV-2) are hypothesized to have arisen via host-virus codivergence and cross-species transmission. We report the discovery of novel herpes simplexviruses during a large-scale screening of fecal samples from wild gorillas, bonobos, and chimpanzees. Phylogenetic analysis indicates that, contrary to expectation, simplexviruses from these African apes are all more closely related to HSV-2 than to HSV-1. Molecular clock-based hypothesis testing suggests the divergence between HSV-1 and the African great ape simplexviruses likely represents a codivergence event between humans and gorillas. The simplexviruses infecting African great apes subsequently experienced multiple cross-species transmission events over the past 3 My, the most recent of which occurred between humans and bonobos around 1 Ma. These findings revise our understanding of the origins of human herpes simplexviruses and suggest that HSV-2 is one of the earliest zoonotic pathogens.

The conservation of endangered species can benefit from a clear understanding of the quantity and distribution of their main foods. The population of mountain gorillas (Gorilla beringei beringei) living in the Virunga Massif of Rwanda, Uganda, and Democratic Republic of Congo has doubled in size since the 1980s, due to success in conservation efforts in and around their habitat. However, this increase in population size along with pressures on gorilla habitat raises concerns about spatial-temporal changes in the gorillas’ food plants. This study modelled the abundance and distribution of gorilla food species in the Virunga Massif. A total of 1050 vegetation recordings were collected on five plant species that are known to be frequently consumed by gorillas in one region of the Virungas, the Karisoke area. Two types of datasets collected along vegetation zones were combined: one with plant abundance expressed with Braun-Blanquet scores; and the other with abundance expressed as biomass. Moreover, ecological characteristics of locations where these species occur were extracted from satellite imagery. Analysis of variance and linear regression models were used to examine relationships between food species abundances and predictor variables. Subsequently, maps for the food species were created using boosted regression trees (BRTs). The abundance of species differed across vegetation zones, and the differences were statistically significant among vegetation zones with enough species observations. The accuracy of the BRTs indicated greater than random predictions (AUC > 0.65). This study shows the suitable areas for these gorilla food species and relevant ecological variables determining their distribution. The results provide insights into habitat occupancy by mountain gorillas, and help to design a baseline for monitoring changes in the abundance of gorilla food species under changing climate and anthropogenic pressure.

Genetic estimation of population sizes has been critical for monitoring cryptic and rare species; however, population estimates do not inherently reveal the permanence or stability of the population under study. Thus, it is important to monitor not only the number of individuals in a population, but also how they are associated in groups and how those groups are distributed across the landscape. Adding to the challenge of obtaining such information with high precision for endangered and elusive species is the need for long-term collection of such data. In this study we compare sampling approaches and genotype non-invasive genetic samples to estimate the number and distribution of wild western lowland gorillas occupying a ˘005Ctextasciitildeþinspace100 km2 area in Loango National Park, Gabon, for the periods 2005–2007 and 2014–2017. Based on the number of genotyped individuals we inferred a minimum of 83 gorillas during the first and 81 gorillas during the second study period. We also obtained similar capture–recapture population size estimates for the two periods despite variance in social dynamics like group formations, group dissolutions and individual dispersal. We furthermore found area fidelity for two groups that were sampled for 10–12 years, despite variation in group membership. Our results revealed how individual movements link groups in a `network' and show that western lowland gorilla populations can show a high degree of temporal and geographic stability concurrent with substantial social dynamics.

Body size is a key determinant of male fighting ability and reproductive success in many animal species, but relationships between these variables have only rarely been examined in group-living animals in which body size often correlates with dominance rank. We examined the relationships between body size (crest height, back breadth and body length), dominance rank, alpha male tenure length, number of adult females and patterns of aggression in 26 wild adult male mountain gorillas, Gorilla beringei beringei, living in multimale groups. A composite measure combining crest height and back breadth (variables were highly correlated and combined into a crest–back score), but not body length, significantly correlated with dominance rank, alpha male tenure length and number of adult females per group. The alpha male had the largest crest–back score in six of the seven groups, and in the majority of dyads the male with the higher crest–back score was higher ranking. The frequency (and intensity on mating days) of aggressive contests was higher between males close in rank. Additionally, aggression occurred more frequently when the initiator was larger than the recipient. Our results suggest that factors other than body size are likely to influence dominance rank, but large size helps males attain and retain high dominance rank, probably leading to greater reproductive success. Further studies on how the timing and intensity of male–male competition influences life history trade-offs between investment in secondary sexual characteristics, body condition and survival may explain variance in lifetime reproductive success within and between species.

A key goal of conservation is to protect biodiversity by supporting the long-term persistence of viable, natural populations of wild species. Conservation practice has long been guided by genetic, ecological and demographic indicators of risk. Emerging evidence of animal culture across diverse taxa and its role as a driver of evolutionary diversification, population structure and demographic processes may be essential for augmenting these conventional conservation approaches and decision-making. Animal culture was the focus of a ground-breaking resolution under the Convention on the Conservation of Migratory Species of Wild Animals (CMS), an international treaty operating under the UN Environment Programme. Here, we synthesize existing evidence to demonstrate how social learning and animal culture interact with processes important to conservation management. Specifically, we explore how social learning might influence population viability and be an important resource in response to anthropogenic change, and provide examples of how it can result in phenotypically distinct units with different, socially learnt behavioural strategies. While identifying culture and social learning can be challenging, indirect identification and parsimonious inferences may be informative. Finally, we identify relevant methodologies and provide a framework for viewing behavioural data through a cultural lens which might provide new insights for conservation management. Fundação Caloust Gulbenkian - FCT info:eu-repo/semantics/publishedVersion

To determine the effectiveness of conservation strategies, not only should we monitor biological variables, such as population size and levels of illegal activity, but also we should examine changes in attitudes and behavior of local community members. Here, I use semistructured interviews of employees at two field sites, in Bwindi Impenetrable National Park, Uganda and Loango National Park, Gabon, to understand if their employment influenced their attitude towards gorillas and conservation and led to behavior change. In contrast to western views of gorillas as “gentle giants,” staff viewed gorillas as dangerous animals before working for these projects. Overall, employment leads to viewing conservation and gorillas more positively, and in many cases, viewing the gorillas as kin. The most common value attributed to the gorillas was economic, yet intrinsic and non-use existence values were frequently mentioned. Loango staff, but not Bwindi staff, reported behavior change related to hunting and bushmeat consumption, which likely is related to bushmeat consumption being commonplace in Gabon but not in Uganda. The Bwindi staff seemed to have a more positive and broader outlook toward conservation than the Loango staff, possibly because they had more years of formal education, they worked with gorillas longer, there is more history of conservation activities in Bwindi, and/or they have been less directly affected by negative consequences of conservation (e.g., crop raiding). This study shows the importance of explaining that gorillas are not dangerous if not provoked and using their human-like characteristics as a means to change conservation values and interest of local communities, while concurrently recognizing that providing economic benefits and reducing negative effects of wildlife are a reality for conservation buy-in.

Funder: Max-Planck-Gesellschaft (Max Planck Society); doi: https://doi.org/10.13039/501100004189, Funder: Max Planck Society Innovation Fund Heinz L. Krekeler Foundation, Much like humans, chimpanzees occupy diverse habitats and exhibit extensive behavioural variability. However, chimpanzees are recognized as a discontinuous species, with four subspecies separated by historical geographic barriers. Nevertheless, their range-wide degree of genetic connectivity remains poorly resolved, mainly due to sampling limitations. By analyzing a geographically comprehensive sample set amplified at microsatellite markers that inform recent population history, we found that isolation by distance explains most of the range-wide genetic structure of chimpanzees. Furthermore, we did not identify spatial discontinuities corresponding with the recognized subspecies, suggesting that some of the subspecies-delineating geographic barriers were recently permeable to gene flow. Substantial range-wide genetic connectivity is consistent with the hypothesis that behavioural flexibility is a salient driver of chimpanzee responses to changing environmental conditions. Finally, our observation of strong local differentiation associated with recent anthropogenic pressures portends future loss of critical genetic diversity if habitat fragmentation and population isolation continue unabated.

Large brains and behavioural innovation are positively correlated, species-specific traits, associated with the behavioural flexibility animals need for adapting to seasonal and unpredictable habitats. Similar ecological challenges would have been important drivers throughout human evolution. However, studies examining the influence of environmental variability on within-species behavioural diversity are lacking despite the critical assumption that population diversification precedes genetic divergence and speciation. Here, using a dataset of 144 wild chimpanzee (Pan troglodytes) communities, we show that chimpanzees exhibit greater behavioural diversity in environments with more variability - in both recent and historical timescales. Notably, distance from Pleistocene forest refugia is associated with the presence of a larger number of behavioural traits, including both tool and non-tool use behaviours. Since more than half of the behaviours investigated are also likely to be cultural, we suggest that environmental variability was a critical evolutionary force promoting the behavioural, as well as cultural diversification of great apes.

Is it possible to slow the rate of aging, or do biological constraints limit its plasticity? We test this ‘invariant rate of aging’ hypothesis with an unprecedented collection of 39 human and nonhuman primate datasets across seven genera. We first recapitulate, in nonhuman primates, the highly regular relationship between life expectancy and lifespan equality seen in humans. We next demonstrate that variation in the rate of aging within genera is orders of magnitude smaller than variation in pre-adult and age-independent mortality. Finally, we demonstrate that changes in the rate of aging, but not other mortality parameters, produce striking, species-atypical changes in mortality patterns. Our results support the invariant rate of aging hypothesis, implying biological constraints on how much the human rate of aging can be slowed.

Abstract Two mechanisms have been proposed to explain why scramble competition can increase the travel requirements of individuals within larger groups. Firstly, individuals in larger groups may be more likely to encounter food sites where other group members have already eaten, leading to greater asynchronous “individual” travel to find fresh sites. Secondly, when food sites are aggregated into patches, larger groups may need to visit more patches to obtain the same amount of food per capita, leading to greater synchronous “group” travel between patches. If the first mechanism can be mitigated by increasing group spread, then we expect the second mechanism to be more sensitive to group size. Here, we examine the individual travel and group travel of the Virunga mountain gorillas, along with potential implications for the two mechanisms of scramble competition. Asynchronous individual travel accounted for 67% of the total travel time, and the remainder arose from group travel. Group spread increased significantly for larger groups, but not enough to prevent an increase in individual travel. Contrary to expectations, group travel decreased with size among most groups, and we found only limited evidence of patch depletion that would cause the second mechanism of scramble competition. Collectively, our results illustrate how the influence of group size can differ for individual travel versus group travel, just as it differs among species for overall travel. Studies that distinguish between the two mechanisms of scramble competition may enhance our understanding of ecological constraints upon group size, including potential differences between frugivores and folivores. Significance statement Feeding competition provides insight into how group size can influence the foraging patterns of social animals, but two key mechanisms are not typically compared. Firstly, larger groups may visit more patches to access the same amount of food per capita (group travel). Secondly, their individuals may also need to move past more spots where another member has already eaten (individual travel). Contrary to expectations, we found that group travel decreased with size for most groups of mountain gorillas, which may reflect extra travel by smaller groups to avoid larger groups. Individual travel increased with size in most groups, even though gorillas in larger groups compensated by spreading out over a broader area. The two mechanisms revealed patterns that were not apparent in our previous study of overall travel. Our approach may help to explain potential differences between folivores and frugivores.

Funder: Max-Planck-Gesellschaft (Max Planck Society); doi: https://doi.org/10.13039/501100004189, Funder: Heinz L. Krekeler Foundation, Large brains and behavioural innovation are positively correlated, species-specific traits, associated with the behavioural flexibility animals need for adapting to seasonal and unpredictable habitats. Similar ecological challenges would have been important drivers throughout human evolution. However, studies examining the influence of environmental variability on within-species behavioural diversity are lacking despite the critical assumption that population diversification precedes genetic divergence and speciation. Here, using a dataset of 144 wild chimpanzee (Pan troglodytes) communities, we show that chimpanzees exhibit greater behavioural diversity in environments with more variability — in both recent and historical timescales. Notably, distance from Pleistocene forest refugia is associated with the presence of a larger number of behavioural traits, including both tool and non-tool use behaviours. Since more than half of the behaviours investigated are also likely to be cultural, we suggest that environmental variability was a critical evolutionary force promoting the behavioural, as well as cultural diversification of great apes.

Background Competition within and between social groups determines access to resources and can be inferred from space use parameters that reflect depletion of food resources and competitive abilities of groups. Using location data from 1998 to 2017, we investigated within- and between-group competition in 12 groups of wild mountain gorillas (Gorilla beringei beringei). As within-group feeding competition is expected to increase with group size, an increase in group size is predicted to lead to an increase in the size of annual home ranges and core areas, but to a decrease in fidelity (reuse of an area). Due to asymmetries in competitive abilities, larger groups are expected to have higher exclusivity (degree of non-shared space) of annual home ranges and core areas than smaller groups. Results We found evidence of within-group feeding competition based on a positive relationship between group size and both annual home range and core area size as well as a negative relationship between group size and core area fidelity. Additionally, fidelity of core areas was lower than of home ranges. Between-group competition was inferred from a trend for groups with more members and more males to have more exclusive home ranges and core areas. Lastly, annual core areas were largely mutually exclusive. Conclusions Our study suggests that non-territorial, group-living animals can have highly dynamic, long-term avoidance-based spacing patterns, both temporally and spatially, to maintain annual core area exclusivity among groups while concurrently shifting these areas annually within overlapping home ranges to avoid resource depletion. Despite ranging in larger home ranges and core areas, larger groups were able to maintain more exclusive ranges than smaller groups, suggesting a competitive advantage for larger groups in between-group competition in a non-territorial species. Together, these findings contribute to understanding how social animals make behavioral adjustments to mitigate the effects of intraspecific competition.

Abstract Evaluating the factors influencing the patterns of female dispersal in mammals is critical to understanding its importance for male and female reproductive strategies and the evolution of social systems. In western lowland gorillas, females emigrate from their natal group (natal dispersal) but also disperse between groups multiple times in their life (secondary dispersal). This strategy is uncommon in primates and may reflect females seeking to reduce feeding competition or female choice for males that can provide protection against infanticide. In this study, we test how inbreeding avoidance, group size, and male competitive ability could influence female dispersal in western gorillas, using 25 natal and 285 secondary dispersal events collected over 20 years at Mbeli Bai. We found that while all females dispersed out of their natal group, presumably to avoid inbreeding, females also left their group before having their first offspring when the dominant male was not their father, pointing towards unconditional dispersal by nulliparous females. Regarding secondary dispersal, we found that females were more likely to stay with males that were at the beginning of their tenure than transfer and more likely to disperse away from (presumably old) males that were near the end of their tenure or closer to their death. Females were also more likely to leave larger groups for smaller ones suggesting a potential effect of within-group feeding competition or avoidance of outsider males or predators. This study highlights the intersexual conflict found in gorillas: while female choice for high-quality males may influence the formation of their relatively rare social system, smaller group size may be more important for females than previously thought, which runs counter to the males’ interest of having a high number of females. Significance Dispersal is a very important life strategy for most group-living mammals. Secondary dispersal by females is a rare behavior but is believed to be a counterstrategy against sexual coercion by males, reduces feeding competition, assists in predator avoidance, and facilitates mate choice. We studied the factors influencing secondary dispersal in western lowland gorillas. We found that the duration of male tenure and the size of the group influences female transfer decisions. This study shows that female reproductive strategies such as secondary dispersal may be very powerful to counter the risk of infanticide through female choice for better protector males but also to reduce the impact of feeding competition or to avoid predators or outsider males.

Humans harbor diverse communities of microorganisms, the majority of which are bacteria in the gastrointestinal tract. These gut bacterial communities in turn host diverse bacteriophage (hereafter phage) communities that have a major impact on their structure, function, and, ultimately, human health. However, the evolutionary and ecological origins of these human-associated phage communities are poorly understood. To address this question, we examined fecal phageomes of 23 wild nonhuman primate taxa, including multiple representatives of all the major primate radiations. We find relatives of the majority of human-associated phages in wild primates. Primate taxa have distinct phageome compositions that exhibit a clear phylosymbiotic signal, and phage-superhost codivergence is often detected for individual phages. Within species, neighboring social groups harbor compositionally and evolutionarily distinct phageomes, which are structured by superhost social behavior. Captive nonhuman primate phageome composition is intermediate between that of their wild counterparts and humans. Phage phylogenies reveal replacement of wild great ape-associated phages with human-associated ones in captivity and, surprisingly, show no signal for the persistence of wild-associated phages in captivity. Together, our results suggest that potentially labile primate-phage associations have persisted across millions of years of evolution. Across primates, these phylosymbiotic and sometimes codiverging phage communities are shaped by transmission between groupmates through grooming and are dramatically modified when primates are moved into captivity.

Noninvasive samples as a source of DNA are gaining interest in genomic studies of endangered species. However, their complex nature and low endogenous DNA content hamper the recovery of good quality data. Target capture has become a productive method to enrich the endogenous fraction of noninvasive samples, such as faeces, but its sensitivity has not yet been extensively studied. Coping with faecal samples with an endogenous DNA content below 1% is a common problem when prior selection of samples from a large collection is not possible. However, samples classified as unfavourable for target capture sequencing might be the only representatives of unique specific geographical locations, or to answer the question of interest. To explore how library complexity may be increased without repeating DNA extractions and generating new libraries, in this study we captured the exome of 60 chimpanzees (Pan troglodytes) using faecal samples with very low proportions of endogenous content (, C.F. is supported by the “La Caixa” doctoral fellowship program. M.A.E. is supported by an FPI (Formación de Personal Investigador) PRE2018-083966 from Ministerio de Ciencia, Universidades e Investigación. The Pan African Programme: The Cultured Chimpanzee (PanAf) is generously funded by the Max Planck Society, the Max Planck Society Innovation Fund and the Heinz L. Krekeler Foundation. E.L is supported by CGL2017-82654-P (MINECO/FEDER,UE). M.K. is supported by “la Caixa” Foundation (ID 100010434), fellowship code LCF/BQ/PR19/11700002. T.M.-B is supported by funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No. 864203), BFU2017-86471-P (MINECO/FEDER, UE), “Unidad de Excelencia María de Maeztu”, funded by the AEI (CEX2018-000792-M), Howard Hughes International Early Career, Obra Social "La Caixa" and Secretaria d’Universitats i Recerca and CERCA Programme del Departament d’Economia i Coneixement de la Generalitat de Catalunya (GRC 2017 SGR 880).

Monitoring population size and growth over time is vital for the conservation of endangered species. Mountain gorillas Gorilla beringei beringei remain in two small populations that span the borders of the Democratic Republic of Congo, Rwanda and Uganda. Each population contains two subpopulations that receive differing levels of protection: the monitored groups are visited daily by park staff and researchers and can be counted by sight, whereas the number and growth rate of unmonitored gorillas must be estimated indirectly. Here, we re-analyze published data from a survey in 2010 combined with new results from a survey conducted during two sampling occasions in 2015 and 2016 to estimate mountain gorilla abundance and growth in the Virunga Massif between 2010 and 2016. Using genetic analysis of non-invasively collected samples and two capture?mark?recapture estimates, we estimated that the 186 detected genotypes represented 221 (95% credible interval: 204?243) to 251 (205?340) unmonitored gorillas in 2016. Together with the 418 monitored gorillas, the overall population of the Virunga Massif thus reached 639 (622?661) to 669 (623?758) individuals. We estimated the growth of the entire Virunga Massif population at about 3% per year, but determined that the growth of the monitored gorillas (4.4%) mainly drove that increase. In contrast, the trend of the unmonitored subpopulation could not be determined with confidence because both models provided 95% CI that encompassed zero: 0.5% per year (?0.7% to +1.7%) and 1.1% (?2.7% to +4.4%). While the overall growth rate represents a rare success story for primate conservation, our results highlight the need for greater protection of unmonitored gorillas.

Although gorillas rarely use tools in the wild, their manipulative skills during plant processing may be similar to those of other tool-using great apes. Virunga mountain gorillas are known for the complexity in their methods of thistle and nettle plant preparation in the wild. However, there has been no comparable data on food processing in the population of mountain gorillas from the Bwindi Impenetrable National Park, Uganda. We investigated the manual actions and hand grips used when accessing edible parts of two hard-to-process plants defended by stinging hairs, epidermis or periderm (i.e., peel of Urera hypselodendron and pith of Mimulopsis arborescens) and one undefended plant (i.e., leaves of Momordica foetida) in 11 Bwindi wild mountain gorillas (Gorilla beringei beringei) using video records ad libitum. Similar to thistle feeding by Virunga gorillas, Bwindi gorillas used the greatest number of manual actions for the most hard-to-process plant (U. hypselodendron), the actions were ordered in several key stages and organised hierarchically. The demands of processing plant material elicited 19 different grips and variable thumb postures, of which three grips were new and 16 grips have either been previously reported or show clear similarities to grips used by other wild and captive African apes and humans. Moreover, our study only partly supports a functional link between diet and hand morphology in mountain gorillas and suggests that the gorilla hand is best adapted to forceful grasping that is required for both manipulation and arboreal locomotion.