1,894 results on '"Marone, P"'
Search Results
2. Material synthesis through simulations guided by machine learning: a position paper
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Syed, Usman, Cunico, Federico, Khan, Uzair, Radicchi, Eros, Setti, Francesco, Speghini, Adolfo, Marone, Paolo, Semenzin, Filiberto, and Cristani, Marco
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Computer Science - Machine Learning - Abstract
In this position paper, we propose an approach for sustainable data collection in the field of optimal mix design for marble sludge reuse. Marble sludge, a calcium-rich residual from stone-cutting processes, can be repurposed by mixing it with various ingredients. However, determining the optimal mix design is challenging due to the variability in sludge composition and the costly, time-consuming nature of experimental data collection. Also, we investigate the possibility of using machine learning models using meta-learning as an optimization tool to estimate the correct quantity of stone-cutting sludge to be used in aggregates to obtain a mix design with specific mechanical properties that can be used successfully in the building industry. Our approach offers two key advantages: (i) through simulations, a large dataset can be generated, saving time and money during the data collection phase, and (ii) Utilizing machine learning models, with performance enhancement through hyper-parameter optimization via meta-learning, to estimate optimal mix designs reducing the need for extensive manual experimentation, lowering costs, minimizing environmental impact, and accelerating the processing of quarry sludge. Our idea promises to streamline the marble sludge reuse process by leveraging collective data and advanced machine learning, promoting sustainability and efficiency in the stonecutting sector.
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- 2024
3. SeisLM: a Foundation Model for Seismic Waveforms
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Liu, Tianlin, Münchmeyer, Jannes, Laurenti, Laura, Marone, Chris, de Hoop, Maarten V., and Dokmanić, Ivan
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Physics - Geophysics ,Computer Science - Machine Learning - Abstract
We introduce the Seismic Language Model (SeisLM), a foundational model designed to analyze seismic waveforms -- signals generated by Earth's vibrations such as the ones originating from earthquakes. SeisLM is pretrained on a large collection of open-source seismic datasets using a self-supervised contrastive loss, akin to BERT in language modeling. This approach allows the model to learn general seismic waveform patterns from unlabeled data without being tied to specific downstream tasks. When fine-tuned, SeisLM excels in seismological tasks like event detection, phase-picking, onset time regression, and foreshock-aftershock classification. The code has been made publicly available on https://github.com/liutianlin0121/seisLM.
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- 2024
4. A universal reconstruction method for X ray scattering tensor tomography based on wavefront modulation
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Lautizi, Ginevra, Studer, Alain, Zdora, Marie-Christine, De Marco, Fabio, Kim, Jisoo, Di Trapani, Vittorio, Marone, Federica, Thibault, Pierre, and Stampanoni, Marco
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Physics - Applied Physics ,Physics - Medical Physics - Abstract
We present a versatile method for full-field, X-ray scattering tensor tomography that is based on energy conservation and is applicable to data obtained using different wavefront modulators. Using this algorithm, we pave the way for speckle-based tensor tomography. The proposed model relies on a mathematical approach that allows tuning spatial resolution and signal sensitivity. We present the application of the algorithm to three different imaging modalities and demonstrate its potential for applications of X-ray directional dark-field imaging., Comment: Accepted by Physical Review Applied
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- 2024
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5. Structural variation in the pangenome of wild and domesticated barley
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Jayakodi, Murukarthick, Lu, Qiongxian, Pidon, Hélène, Rabanus-Wallace, M. Timothy, Bayer, Micha, Lux, Thomas, Guo, Yu, Jaegle, Benjamin, Badea, Ana, Bekele, Wubishet, Brar, Gurcharn S., Braune, Katarzyna, Bunk, Boyke, Chalmers, Kenneth J., Chapman, Brett, Jørgensen, Morten Egevang, Feng, Jia-Wu, Feser, Manuel, Fiebig, Anne, Gundlach, Heidrun, Guo, Wenbin, Haberer, Georg, Hansson, Mats, Himmelbach, Axel, Hoffie, Iris, Hoffie, Robert E., Hu, Haifei, Isobe, Sachiko, König, Patrick, Kale, Sandip M., Kamal, Nadia, Keeble-Gagnère, Gabriel, Keller, Beat, Knauft, Manuela, Koppolu, Ravi, Krattinger, Simon G., Kumlehn, Jochen, Langridge, Peter, Li, Chengdao, Marone, Marina P., Maurer, Andreas, Mayer, Klaus F. X., Melzer, Michael, Muehlbauer, Gary J., Murozuka, Emiko, Padmarasu, Sudharsan, Perovic, Dragan, Pillen, Klaus, Pin, Pierre A., Pozniak, Curtis J., Ramsay, Luke, Pedas, Pai Rosager, Rutten, Twan, Sakuma, Shun, Sato, Kazuhiro, Schüler, Danuta, Schmutzer, Thomas, Scholz, Uwe, Schreiber, Miriam, Shirasawa, Kenta, Simpson, Craig, Skadhauge, Birgitte, Spannagl, Manuel, Steffenson, Brian J., Thomsen, Hanne C., Tibbits, Josquin F., Nielsen, Martin Toft Simmelsgaard, Trautewig, Corinna, Vequaud, Dominique, Voss, Cynthia, Wang, Penghao, Waugh, Robbie, Westcott, Sharon, Rasmussen, Magnus Wohlfahrt, Zhang, Runxuan, Zhang, Xiao-Qi, Wicker, Thomas, Dockter, Christoph, Mascher, Martin, and Stein, Nils
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- 2024
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6. AdapterSwap: Continuous Training of LLMs with Data Removal and Access-Control Guarantees
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Fleshman, William, Khan, Aleem, Marone, Marc, and Van Durme, Benjamin
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Computer Science - Machine Learning ,Computer Science - Artificial Intelligence ,Computer Science - Computation and Language - Abstract
Large language models (LLMs) are increasingly capable of completing knowledge intensive tasks by recalling information from a static pretraining corpus. Here we are concerned with LLMs in the context of evolving data requirements. For instance: batches of new data that are introduced periodically; subsets of data with user-based access controls; or requirements on dynamic removal of documents with guarantees that associated knowledge cannot be recalled. We wish to satisfy these requirements while at the same time ensuring a model does not forget old information when new data becomes available. To address these issues, we introduce AdapterSwap, a training and inference scheme that organizes knowledge from a data collection into a set of low-rank adapters, which are dynamically composed during inference. Our experiments demonstrate AdapterSwap's ability to support efficient continual learning, while also enabling organizations to have fine-grained control over data access and deletion.
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- 2024
7. Verifiable by Design: Aligning Language Models to Quote from Pre-Training Data
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Zhang, Jingyu, Marone, Marc, Li, Tianjian, Van Durme, Benjamin, and Khashabi, Daniel
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Computer Science - Computation and Language - Abstract
To trust the fluent generations of large language models (LLMs), humans must be able to verify their correctness against trusted, external sources. Recent efforts, such as providing citations via retrieved documents or post-hoc provenance, enhance verifiability but provide no guarantees on their correctness. To address these limitations, we tackle the verifiability goal with a different philosophy: trivializing the verification process by developing models that quote verbatim statements from trusted sources in their pre-training data. We propose Quote-Tuning, which demonstrates the feasibility of aligning models to quote. The core of Quote-Tuning is a fast membership inference function that efficiently verifies text against trusted corpora. We leverage this tool to design a reward function to quantify quotes in model responses, and curate datasets for preference learning. Experiments show that Quote-Tuning significantly increases verbatim quotes from high-quality documents by up to 130% relative to base models while maintaining response quality. Quote-Tuning is applicable in different tasks, generalizes to out-of-domain data and diverse model families, and provides additional benefits to truthfulness. Our method not only serves as a hassle-free method to increase quoting but also opens up avenues for improving LLM trustworthiness through better verifiability.
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- 2024
8. Dated Data: Tracing Knowledge Cutoffs in Large Language Models
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Cheng, Jeffrey, Marone, Marc, Weller, Orion, Lawrie, Dawn, Khashabi, Daniel, and Van Durme, Benjamin
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Computer Science - Computation and Language - Abstract
Released Large Language Models (LLMs) are often paired with a claimed knowledge cutoff date, or the dates at which training data was gathered. Such information is crucial for applications where the LLM must provide up to date information. However, this statement only scratches the surface: do all resources in the training data share the same knowledge cutoff date? Does the model's demonstrated knowledge for these subsets closely align to their cutoff dates? In this work, we define the notion of an effective cutoff. This is distinct from the LLM designer reported cutoff and applies separately to sub-resources and topics. We propose a simple approach to estimate effective cutoffs on the resource-level temporal alignment of an LLM by probing across versions of the data. Using this analysis, we find that effective cutoffs often differ from reported cutoffs. To understand the root cause of this observation, we conduct a direct large-scale analysis on open pre-training datasets. Our analysis reveals two reasons for these inconsistencies: (1) temporal biases of CommonCrawl data due to non-trivial amounts of old data in new dumps and (2) complications in LLM deduplication schemes involving semantic duplicates and lexical near-duplicates. Overall, our results show that knowledge cutoffs are not as simple as they have seemed and that care must be taken both by LLM dataset curators as well as practitioners who seek to use information from these models.
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- 2024
9. Energy dissipation in earthquakes
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Kammer, David S., McLaskey, Gregory C., Abercrombie, Rachel E., Ampuero, Jean-Paul, Cattania, Camilla, Cocco, Massimo, Zilio, Luca Dal, Dresen, Georg, Gabriel, Alice-Agnes, Ke, Chun-Yu, Marone, Chris, Selvadurai, Paul A., and Tinti, Elisa
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Physics - Geophysics - Abstract
Earthquakes are rupture-like processes that propagate along tectonic faults and cause seismic waves. The propagation speed and final area of the rupture, which determine an earthquake's potential impact, are directly related to the nature and quantity of the energy dissipation involved in the rupture process. Here we present the challenges associated with defining and measuring the energy dissipation in laboratory and natural earthquakes across many scales. We discuss the importance and implications of distinguishing between energy dissipation that occurs close to and far behind the rupture tip and we identify open scientific questions related to a consistent modeling framework for earthquake physics that extends beyond classical Linear Elastic Fracture Mechanics., Comment: 8 pages, 2 figures
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- 2024
10. StarCoder 2 and The Stack v2: The Next Generation
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Lozhkov, Anton, Li, Raymond, Allal, Loubna Ben, Cassano, Federico, Lamy-Poirier, Joel, Tazi, Nouamane, Tang, Ao, Pykhtar, Dmytro, Liu, Jiawei, Wei, Yuxiang, Liu, Tianyang, Tian, Max, Kocetkov, Denis, Zucker, Arthur, Belkada, Younes, Wang, Zijian, Liu, Qian, Abulkhanov, Dmitry, Paul, Indraneil, Li, Zhuang, Li, Wen-Ding, Risdal, Megan, Li, Jia, Zhu, Jian, Zhuo, Terry Yue, Zheltonozhskii, Evgenii, Dade, Nii Osae Osae, Yu, Wenhao, Krauß, Lucas, Jain, Naman, Su, Yixuan, He, Xuanli, Dey, Manan, Abati, Edoardo, Chai, Yekun, Muennighoff, Niklas, Tang, Xiangru, Oblokulov, Muhtasham, Akiki, Christopher, Marone, Marc, Mou, Chenghao, Mishra, Mayank, Gu, Alex, Hui, Binyuan, Dao, Tri, Zebaze, Armel, Dehaene, Olivier, Patry, Nicolas, Xu, Canwen, McAuley, Julian, Hu, Han, Scholak, Torsten, Paquet, Sebastien, Robinson, Jennifer, Anderson, Carolyn Jane, Chapados, Nicolas, Patwary, Mostofa, Tajbakhsh, Nima, Jernite, Yacine, Ferrandis, Carlos Muñoz, Zhang, Lingming, Hughes, Sean, Wolf, Thomas, Guha, Arjun, von Werra, Leandro, and de Vries, Harm
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Computer Science - Software Engineering ,Computer Science - Artificial Intelligence - Abstract
The BigCode project, an open-scientific collaboration focused on the responsible development of Large Language Models for Code (Code LLMs), introduces StarCoder2. In partnership with Software Heritage (SWH), we build The Stack v2 on top of the digital commons of their source code archive. Alongside the SWH repositories spanning 619 programming languages, we carefully select other high-quality data sources, such as GitHub pull requests, Kaggle notebooks, and code documentation. This results in a training set that is 4x larger than the first StarCoder dataset. We train StarCoder2 models with 3B, 7B, and 15B parameters on 3.3 to 4.3 trillion tokens and thoroughly evaluate them on a comprehensive set of Code LLM benchmarks. We find that our small model, StarCoder2-3B, outperforms other Code LLMs of similar size on most benchmarks, and also outperforms StarCoderBase-15B. Our large model, StarCoder2- 15B, significantly outperforms other models of comparable size. In addition, it matches or outperforms CodeLlama-34B, a model more than twice its size. Although DeepSeekCoder- 33B is the best-performing model at code completion for high-resource languages, we find that StarCoder2-15B outperforms it on math and code reasoning benchmarks, as well as several low-resource languages. We make the model weights available under an OpenRAIL license and ensure full transparency regarding the training data by releasing the SoftWare Heritage persistent IDentifiers (SWHIDs) of the source code data.
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- 2024
11. Probing the evolution of fault properties during the seismic cycle with deep learning
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Laurenti, Laura, Paoletti, Gabriele, Tinti, Elisa, Galasso, Fabio, Collettini, Cristiano, and Marone, Chris
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- 2024
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12. Physics informed neural network can retrieve rate and state friction parameters from acoustic monitoring of laboratory stick-slip experiments
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Borate, Prabhav, Rivière, Jacques, Marty, Samson, Marone, Chris, Kifer, Daniel, and Shokouhi, Parisa
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- 2024
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13. Waste From Alwar Quartzite (A Global Heritage Stone From Rajasthan - India) As Secondary Raw Materials for Cementitious Tile Adhesives
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Graziano, Sossio Fabio, Marone, Paolo, Trinchillo, Antonio, Di Benedetto, Claudia, Montesano, Giovanna, Rispoli, Concetta, and Cappelletti, Piergiulio
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- 2024
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14. Role of critical stress in quantifying the magnitude of fluid-injection triggered earthquakes
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Yu, Jiayi, Eijsink, Agathe, Marone, Chris, Rivière, Jacques, Shokouhi, Parisa, and Elsworth, Derek
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- 2024
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15. Adapting malaria indicator surveys to investigate treatment adherence: a pilot study on Bioko Island, Equatorial Guinea
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Galick, David S., Donfack, Olivier Tresor, Mifumu, Teresa Ayingono Ondo, Onvogo, Cristina Ngui Otogo, Dougan, Teobaldo Babo, Mikue, Monica Idelvina Aling Ayen, Nguema, Godino Esono, Eribo, Charity Okoro, Euka, Maria Mirella Buila, Marone Martin, Kate P., Phiri, Wonder P., Guerra, Carlos A., and García, Guillermo A.
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- 2024
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16. Mediation role of interpersonal problems between insecure attachment and eating disorder psychopathology
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Carfagno, Marco, Barone, Eugenia, Arsenio, Eleonora, Bello, Rosaria, Marone, Luigi, Volpicelli, Antonio, Cascino, Giammarco, and Monteleone, Alessio Maria
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- 2024
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17. Author Correction: Earthquake energy dissipation in a fracture mechanics framework
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Kammer, David S., McLaskey, Gregory C., Abercrombie, Rachel E., Ampuero, Jean-Paul, Cattania, Camilla, Cocco, Massimo, Dal Zilio, Luca, Dresen, Georg, Gabriel, Alice-Agnes, Ke, Chun-Yu, Marone, Chris, Selvadurai, Paul Antony, and Tinti, Elisa
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- 2024
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18. Earthquake energy dissipation in a fracture mechanics framework
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Kammer, David S., McLaskey, Gregory C., Abercrombie, Rachel E., Ampuero, Jean-Paul, Cattania, Camilla, Cocco, Massimo, Dal Zilio, Luca, Dresen, Georg, Gabriel, Alice-Agnes, Ke, Chun-Yu, Marone, Chris, Selvadurai, Paul Antony, and Tinti, Elisa
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- 2024
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19. X-ray scattering tensor tomography based finite element modelling of heterogeneous materials
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Auenhammer, Robert M., Kim, Jisoo, Oddy, Carolyn, Mikkelsen, Lars P., Marone, Federica, Stampanoni, Marco, and Asp, Leif E.
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- 2024
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20. Crustal permeability generated through microearthquakes is constrained by seismic moment
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Yu, Pengliang, Mali, Ankur, Velaga, Thejasvi, Bi, Alex, Yu, Jiayi, Marone, Chris, Shokouhi, Parisa, and Elsworth, Derek
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- 2024
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21. Probing the evolution of fault properties during the seismic cycle with deep learning
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Laura Laurenti, Gabriele Paoletti, Elisa Tinti, Fabio Galasso, Cristiano Collettini, and Chris Marone
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Science - Abstract
Abstract We use seismic waves that pass through the hypocentral region of the 2016 M6.5 Norcia earthquake together with Deep Learning (DL) to distinguish between foreshocks, aftershocks and time-to-failure (TTF). Binary and N-class models defined by TTF correctly identify seismograms in test with > 90% accuracy. We use raw seismic records as input to a 7 layer CNN model to perform the classification. Here we show that DL models successfully distinguish seismic waves pre/post mainshock in accord with lab and theoretical expectations of progressive changes in crack density prior to abrupt change at failure and gradual postseismic recovery. Performance is lower for band-pass filtered seismograms (below 10 Hz) suggesting that DL models learn from the evolution of subtle changes in elastic wave attenuation. Tests to verify that our results indeed provide a proxy for fault properties included DL models trained with the wrong mainshock time and those using seismic waves far from the Norcia mainshock; both show degraded performance. Our results demonstrate that DL models have the potential to track the evolution of fault zone properties during the seismic cycle. If this result is generalizable it could improve earthquake early warning and seismic hazard analysis.
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- 2024
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22. Selective haematological cancer eradication with preserved haematopoiesis
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Garaudé, Simon, Marone, Romina, Lepore, Rosalba, Devaux, Anna, Beerlage, Astrid, Seyres, Denis, Dell’ Aglio, Alessandro, Juskevicius, Darius, Zuin, Jessica, Burgold, Thomas, Wang, Sisi, Katta, Varun, Manquen, Garret, Li, Yichao, Larrue, Clément, Camus, Anna, Durzynska, Izabela, Wellinger, Lisa C., Kirby, Ian, Van Berkel, Patrick H., Kunz, Christian, Tamburini, Jérôme, Bertoni, Francesco, Widmer, Corinne C., Tsai, Shengdar Q., Simonetta, Federico, Urlinger, Stefanie, and Jeker, Lukas T.
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- 2024
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23. Are cereal grasses a single genetic system?
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Mascher, Martin, Marone, Marina Püpke, Schreiber, Mona, and Stein, Nils
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- 2024
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24. High-Rate Phase Association with Travel Time Neural Fields
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Shi, Cheng, Poggiali, Giulio, Marone, Chris, de Hoop, Maarten V., and Dokmanić, Ivan
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Physics - Geophysics ,Computer Science - Machine Learning ,Electrical Engineering and Systems Science - Signal Processing - Abstract
Earthquake science and seismology rely on the ability to associate seismic waves with their originating earthquakes. Earthquake detection algorithms based on deep learning have progressed rapidly and now routinely detect microearthquakes with unprecedented clarity, providing information about fault dynamics on increasingly finer spatiotemporal scales. However, this densification of detections can overwhelm existing techniques for phase association which rely on fixed wave speed models and associate events one by one. These methods fail when the event rates become high or where the 4D complexity of elastic wave speeds cannot be ignored. Here, we introduce HARPA, a deep learning solution to this problem. HARPA is a high-rate association framework which incorporates wave physics by leveraging deep generative models and travel time neural fields. Instead of associating events one by one, it lifts arrival sequences to probability distributions and compares them using an optimal transport metric. The generative travel time neural fields are used to estimate the wave speed simultaneously with association. HARPA outperforms state-of-the-art association methods for both real seismic data and complex synthetic models and paves the way for improved understanding of seismicity while establishing a new seismic data analysis paradigm.
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- 2023
25. 'According to ...': Prompting Language Models Improves Quoting from Pre-Training Data
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Weller, Orion, Marone, Marc, Weir, Nathaniel, Lawrie, Dawn, Khashabi, Daniel, and Van Durme, Benjamin
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Computer Science - Computation and Language ,Computer Science - Artificial Intelligence - Abstract
Large Language Models (LLMs) may hallucinate and generate fake information, despite pre-training on factual data. Inspired by the journalistic device of "according to sources", we propose according-to prompting: directing LLMs to ground responses against previously observed text. To quantify this grounding, we propose a novel evaluation metric (QUIP-Score) that measures the extent to which model-produced answers are directly found in underlying text corpora. We illustrate with experiments on three corpora (Wikipedia, PubMed, and the U.S. legal tax code) that these prompts improve grounding under our metrics, with the additional benefit of often improving end-task performance. Furthermore, prompts that ask the model to decrease grounding (or to ground to other corpora) indeed decrease QUIP-Score, indicating the ability of LLMs to increase or decrease grounded generations on request., Comment: Accepted to EACL 2024
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- 2023
26. StarCoder: may the source be with you!
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Li, Raymond, Allal, Loubna Ben, Zi, Yangtian, Muennighoff, Niklas, Kocetkov, Denis, Mou, Chenghao, Marone, Marc, Akiki, Christopher, Li, Jia, Chim, Jenny, Liu, Qian, Zheltonozhskii, Evgenii, Zhuo, Terry Yue, Wang, Thomas, Dehaene, Olivier, Davaadorj, Mishig, Lamy-Poirier, Joel, Monteiro, João, Shliazhko, Oleh, Gontier, Nicolas, Meade, Nicholas, Zebaze, Armel, Yee, Ming-Ho, Umapathi, Logesh Kumar, Zhu, Jian, Lipkin, Benjamin, Oblokulov, Muhtasham, Wang, Zhiruo, Murthy, Rudra, Stillerman, Jason, Patel, Siva Sankalp, Abulkhanov, Dmitry, Zocca, Marco, Dey, Manan, Zhang, Zhihan, Fahmy, Nour, Bhattacharyya, Urvashi, Yu, Wenhao, Singh, Swayam, Luccioni, Sasha, Villegas, Paulo, Kunakov, Maxim, Zhdanov, Fedor, Romero, Manuel, Lee, Tony, Timor, Nadav, Ding, Jennifer, Schlesinger, Claire, Schoelkopf, Hailey, Ebert, Jan, Dao, Tri, Mishra, Mayank, Gu, Alex, Robinson, Jennifer, Anderson, Carolyn Jane, Dolan-Gavitt, Brendan, Contractor, Danish, Reddy, Siva, Fried, Daniel, Bahdanau, Dzmitry, Jernite, Yacine, Ferrandis, Carlos Muñoz, Hughes, Sean, Wolf, Thomas, Guha, Arjun, von Werra, Leandro, and de Vries, Harm
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Computer Science - Computation and Language ,Computer Science - Artificial Intelligence ,Computer Science - Programming Languages ,Computer Science - Software Engineering - Abstract
The BigCode community, an open-scientific collaboration working on the responsible development of Large Language Models for Code (Code LLMs), introduces StarCoder and StarCoderBase: 15.5B parameter models with 8K context length, infilling capabilities and fast large-batch inference enabled by multi-query attention. StarCoderBase is trained on 1 trillion tokens sourced from The Stack, a large collection of permissively licensed GitHub repositories with inspection tools and an opt-out process. We fine-tuned StarCoderBase on 35B Python tokens, resulting in the creation of StarCoder. We perform the most comprehensive evaluation of Code LLMs to date and show that StarCoderBase outperforms every open Code LLM that supports multiple programming languages and matches or outperforms the OpenAI code-cushman-001 model. Furthermore, StarCoder outperforms every model that is fine-tuned on Python, can be prompted to achieve 40\% pass@1 on HumanEval, and still retains its performance on other programming languages. We take several important steps towards a safe open-access model release, including an improved PII redaction pipeline and a novel attribution tracing tool, and make the StarCoder models publicly available under a more commercially viable version of the Open Responsible AI Model license.
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- 2023
27. Physics informed neural network can retrieve rate and state friction parameters from acoustic monitoring of laboratory stick-slip experiments
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Prabhav Borate, Jacques Rivière, Samson Marty, Chris Marone, Daniel Kifer, and Parisa Shokouhi
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Medicine ,Science - Abstract
Abstract Various machine learning (ML) and deep learning (DL) techniques have been recently applied to the forecasting of laboratory earthquakes from friction experiments. The magnitude and timing of shear failures in stick-slip cycles are predicted using features extracted from the recorded ultrasonic or acoustic emission (AE) signals. In addition, the Rate and State Friction (RSF) constitutive laws are extensively used to model the frictional behavior of faults. In this work, we use data from shear experiments coupled with passive acoustic (variance, kurtosis, and AE rate) interleaved with active source ultrasonic monitoring (transmitted wave amplitude) to develop physics-informed neural network (PINN) models incorporating the RSF law and AE rate generation equation with wave amplitude serving as a proxy for friction state variable. This PINN framework allows learning RSF parameters from stick-slip experiments rather than measuring them through a series of velocity step experiments. We observe that when the stick-slip cycles are irregular, the PINN models outperform the data-driven DL models. Transfer learning (TL) PINN models are also developed by pre-training on data collected at one normal stress level followed by forecasting shear failures and retrieving RSF parameters at other stress levels (i.e., with different recurrence intervals) after retraining on a limited amount of new data. Our findings suggest that TL models perform better compared to standalone models. Both standalone and TL PINN-estimated RSF parameters and their ground truth values show excellent agreements thus demonstrating that RSF parameters can be retrieved from laboratory stick-slip experiments using the corresponding acoustic data and that the transmitted wave amplitude provides a good representation of the evolving frictional state during stick-slips.
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- 2024
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28. Role of critical stress in quantifying the magnitude of fluid-injection triggered earthquakes
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Jiayi Yu, Agathe Eijsink, Chris Marone, Jacques Rivière, Parisa Shokouhi, and Derek Elsworth
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Science - Abstract
Abstract Here we define and report the relationship between the maximum seismic magnitude (M) and injection volume (ΔV) through fluid-injection fault-reactivation experiments and analysis. This relationship incorporates the in situ shear modulus (G) and fault pre-stress as a fraction of the strength drop (c), expressed as M = c/(1-c) GΔV. Injection response defines a sigmoidal relation in $$M-\Delta {V}$$ M − Δ V space with unit gradient limbs linked by an intermediate up-step. Both laboratory observations and analysis for a rigid fault with slip limited to the zone of pressurization show trajectories of cumulative $$M-\Delta {V}$$ M − Δ V that evolve at a gradient of unity, are offset in order of increasing pre-stress and are capable of step changes in moment with shear reactivation at elevated critical-stresses – key features apparent in field observations. The model and confirmatory laboratory observations explain the occurrence of some triggered earthquakes at EGS sites significantly larger than expected relative to injection volumes and based on previous models.
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- 2024
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29. Adapting malaria indicator surveys to investigate treatment adherence: a pilot study on Bioko Island, Equatorial Guinea
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David S. Galick, Olivier Tresor Donfack, Teresa Ayingono Ondo Mifumu, Cristina Ngui Otogo Onvogo, Teobaldo Babo Dougan, Monica Idelvina Aling Ayen Mikue, Godino Esono Nguema, Charity Okoro Eribo, Maria Mirella Buila Euka, Kate P. Marone Martin, Wonder P. Phiri, Carlos A. Guerra, and Guillermo A. García
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Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Adherence to anti-malarial treatment regimens is an important aspect of understanding and improving the impact of malaria case management. However, both adherence to artemisinin-based combination therapy (ACT) and the factors driving it vary widely. While many other evaluation activities have been conducted on Bioko Island, until now adherence to anti-malarial treatments, and in particular ACT has not been evaluated. Methods The implementation of a malaria indicator survey (MIS) conducted on Bioko in 2023 was leveraged to evaluate adherence to ACT provided to individuals testing positive following the survey. A follow-up team visited the targeted households, physically observed treatment blisters where possible, and provided messaging to household members on the importance of adhering to the treatment guidelines to household members. The team used survey data from the targeted households to make messaging as relevant to the household’s particular context as possible. Results Overall ACT adherence on Bioko Island was low, around 50%, and this varied demographically and geographically. Some of the highest transmission areas had exceptionally low adherence, but no systematic relationship between proper adherence and Plasmodium falciparum prevalence was detected. Estimates of adherence from follow-up visits were much lower than survey-based estimates in the same households (52.5% versus 87.1%), suggesting that lack of proper adherence may be a much larger issue on Bioko Island than previously thought. Conclusion Representative surveys can be easily adapted to provide empirical estimates of adherence to anti-malarial treatments, complementary to survey-based and health facility-based estimates. The large discrepancy between adherence as measured in this study and survey-based estimates on Bioko Island suggests a health facility-based study to quantify adherence among the population receiving treatment for symptomatic malaria may be necessary.
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- 2024
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30. Using in-situ strain measurements to evaluate the accuracy of stress estimation procedures from fracture injection/shut-in tests
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Guglielmi, Yves, McClure, Mark, Burghardt, Jeffrey, Morris, Joseph P, Doe, Thomas, Fu, Pengcheng, Knox, Hunter, Vermeul, Vince, Kneafsey, Tim, Team, The EGS Collab, Ajo-Franklin, J, Baumgartner, T, Beckers, K, Blankenship, D, Bonneville, A, Boyd, L, Brown, S, Burghardt, JA, Chai, C, Chakravarty, A, Chen, T, Chen, Y, Chi, B, Condon, K, Cook, PJ, Crandall, D, Dobson, PF, Doe, T, Doughty, CA, Elsworth, D, Feldman, J, Feng, Z, Foris, A, Frash, LP, Frone, Z, Fu, P, Gao, K, Ghassemi, A, Guglielmi, Y, Haimson, B, Hawkins, A, Heise, J, Hopp, C, Horn, M, Horne, RN, Horner, J, Hu, M, Huang, H, Huang, L, Im, KJ, Ingraham, M, Jafarov, E, Jayne, RS, Johnson, TC, Johnson, SE, Johnston, B, Karra, S, Kim, K, King, DK, Kneafsey, T, Knox, H, Knox, J, Kumar, D, Kutun, K, Lee, M, Li, D, Li, J, Li, K, Li, Z, Maceira, M, Mackey, P, Makedonska, N, Marone, CJ, Mattson, E, McClure, MW, McLennan, J, McLing, T, Medler, C, Mellors, RJ, Metcalfe, E, Miskimins, J, Moore, J, Morency, CE, Morris, JP, Myers, T, Nakagawa, S, Neupane, G, Newman, G, Nieto, A, Paronish, T, Pawar, R, Petrov, P, Pietzyk, B, Podgorney, R, Polsky, Y, Pope, J, Porse, S, Primo, JC, Pyatina, T, and Reimers, C
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Engineering ,Resources Engineering and Extractive Metallurgy ,Bioengineering ,DFIT ,Minifrac ,SIMFIP ,Collab ,Civil Engineering ,Mining & Metallurgy ,Civil engineering ,Resources engineering and extractive metallurgy - Abstract
Fracture injection/shut-in tests are commonly used to measure the state of stress in the subsurface. Injection creates a hydraulic fracture (or in some cases, opens a preexisting fracture), and then the pressure after shut-in is monitored to identify fracture closure. Different interpretation procedures have been proposed for estimating closure, and the procedures sometimes yield significantly different results. In this study, direct, in-situ strain measurements are used to observe fracture reopening and closure. The tests were performed as part of the EGS Collab project, a mesoscale project performed at 1.25 and 1.5 km depth at the Sanford Underground Research Facility. The tests were instrumented with the SIMFIP tool, a double-packer probe with a high-resolution three-dimensional borehole displacement sensor. The measurements provide a direct observation of the fracture closure signature, enabling a high-fidelity estimate of the fracture closure stress (ie, the normal stress on the fracture). In two of the four tests, injection created an opening mode fracture, and so the closure stress can be interpreted as the minimum principal stress. In the other two tests, injection probably opened preexisting natural fractures, and so the closure stress can be interpreted as the normal stress on the fractures. The strain measurements are compared against different proposed methods for estimating closure stress from pressure transients. The shut-in transients are analyzed with two techniques that are widely used in the field of petroleum engineering – the ‘tangent’ method and the ‘compliance’ method. In three of the four tests, the tangent method significantly underestimates the closure stress. The compliance method is reasonably accurate in all four tests. Closure stress is also interpreted using two other commonly-used methods – ‘first deviation from linearity’ and the method of (Hayashi and Haimson, 1991). In comparison with the SIMFIP data, these methods tend to overestimate the closure stress, evidently because they identify closure from early-time transient effects, such as near-wellbore tortuosity. In two of the tests, microseismic imaging provides an independent estimate of the size of the fracture created by injection. When combined with a simple mass balance calculation, the SIMFIP stress measurements yield predictions of fracture size that are reasonably consistent with the estimates from microseismic. The calculations imply an apparent fracture toughness 2-3x higher than typical laboratory-derived values.
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- 2023
31. Data Portraits: Recording Foundation Model Training Data
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Marone, Marc and Van Durme, Benjamin
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Computer Science - Machine Learning ,Computer Science - Computation and Language - Abstract
Foundation models are trained on increasingly immense and opaque datasets. Even while these models are now key in AI system building, it can be difficult to answer the straightforward question: has the model already encountered a given example during training? We therefore propose a widespread adoption of Data Portraits: artifacts that record training data and allow for downstream inspection. First we outline the properties of such an artifact and discuss how existing solutions can be used to increase transparency. We then propose and implement a solution based on data sketching, stressing fast and space efficient querying. Using our tools, we document a popular language modeling corpus (The Pile) and a recently released code modeling dataset (The Stack). We show that our solution enables answering questions about test set leakage and model plagiarism. Our tool is lightweight and fast, costing only 3% of the dataset size in overhead. We release a live interface of our tools at https://dataportraits.org/ and call on dataset and model creators to release Data Portraits as a complement to current documentation practices., Comment: NeurIPS 2023 Datasets and Benchmarks
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- 2023
32. A strainmeter array as the fulcrum of novel observatory sites along the Alto Tiberina Near Fault Observatory
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L. Chiaraluce, R. Bennett, D. Mencin, W. Johnson, M. R. Barchi, M. Bohnhoff, P. Baccheschi, A. Caracausi, C. Calamita, A. Cavaliere, A. Gualandi, E. Mandler, M. T. Mariucci, L. Martelli, S. Marzorati, P. Montone, D. Pantaleo, S. Pucci, E. Serpelloni, M. Supino, S. Stramondo, C. Hanagan, L. Van Boskirk, M. Gottlieb, G. Mattioli, M. Urbani, F. Mirabella, A. Akimbekova, S. Pierdominici, T. Wiersberg, C. Marone, L. Palmieri, and L. Schenato
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Geology ,QE1-996.5 - Abstract
Fault slip is a complex natural phenomenon involving multiple spatiotemporal scales from seconds to days to weeks. To understand the physical and chemical processes responsible for the full fault slip spectrum, a multidisciplinary approach is highly recommended. The Near Fault Observatories (NFOs) aim at providing high-precision and spatiotemporally dense multidisciplinary near-fault data, enabling the generation of new original observations and innovative scientific products. The Alto Tiberina Near Fault Observatory is a permanent monitoring infrastructure established around the Alto Tiberina fault (ATF), a 60 km long low-angle normal fault (mean dip 20°), located along a sector of the Northern Apennines (central Italy) undergoing an extension at a rate of about 3 mm yr−1. The presence of repeating earthquakes on the ATF and a steep gradient in crustal velocities measured across the ATF by GNSS stations suggest large and deep (5–12 km) portions of the ATF undergoing aseismic creep. Both laboratory and theoretical studies indicate that any given patch of a fault can creep, nucleate slow earthquakes, and host large earthquakes, as also documented in nature for certain ruptures (e.g., Iquique in 2014, Tōhoku in 2011, and Parkfield in 2004). Nonetheless, how a fault patch switches from one mode of slip to another, as well as the interaction between creep, slow slip, and regular earthquakes, is still poorly documented by near-field observation. With the strainmeter array along the Alto Tiberina fault system (STAR) project, we build a series of six geophysical observatory sites consisting of 80–160 m deep vertical boreholes instrumented with strainmeters and seismometers as well as meteorological and GNSS antennas and additional seismometers at the surface. By covering the portions of the ATF that exhibits repeated earthquakes at shallow depth (above 4 km) with these new observatory sites, we aim to collect unique open-access data to answer fundamental questions about the relationship between creep, slow slip, dynamic earthquake rupture, and tectonic faulting.
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- 2024
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33. Mediation role of interpersonal problems between insecure attachment and eating disorder psychopathology
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Marco Carfagno, Eugenia Barone, Eleonora Arsenio, Rosaria Bello, Luigi Marone, Antonio Volpicelli, Giammarco Cascino, and Alessio Maria Monteleone
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Eating disorders ,Attachment ,Interpersonal problems ,Psychopathology ,Mediation analysis ,Nutritional diseases. Deficiency diseases ,RC620-627 - Abstract
Abstract Purpose Although insecure attachment and interpersonal problems have been acknowledged as risk and maintaining factors of eating disorders (EDs), the mediating role of interpersonal problems between attachment style and ED psychopathology has been poorly explored. The purpose of this study was to investigate the mediating role of interpersonal problems between insecure attachment and ED psychopathology. Methods One-hundred-nine women with anorexia nervosa and 157 women with bulimia nervosa filled in the Eating Disorder Inventory-2 (EDI-2) and the Experiences in Close Relationships (ECR) revised scale to assess ED core symptoms and attachment styles, respectively. Interpersonal difficulties were evaluated by the Inventory of Interpersonal Problems (IIP-32). A mediator’s path model was conducted with anxious and avoidant attachment subscores as independent variables, ED core symptoms as dependent variables and interpersonal difficulties as mediators. The diagnosis was entered in the model as a confounding factor. Results The socially inhibited/avoidant interpersonal dimension was a mediator between avoidant attachment and the drive to thinness as well as between avoidant attachment and body dissatisfaction. An indirect connection was found between attachment-related anxiety and bulimic symptoms through the mediation of intrusive/needy score. Conclusions Social avoidance and intrusiveness mediate the relationships between avoidant and anxious attachment styles and ED psychopathology. These interpersonal problems may represent specific targets for psychotherapeutic treatments in individuals with EDs and insecure attachment. Level of evidence Level III: Evidence obtained from well-designed cohort or case–control analytic studies.
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- 2024
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34. Earthquake energy dissipation in a fracture mechanics framework
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David S. Kammer, Gregory C. McLaskey, Rachel E. Abercrombie, Jean-Paul Ampuero, Camilla Cattania, Massimo Cocco, Luca Dal Zilio, Georg Dresen, Alice-Agnes Gabriel, Chun-Yu Ke, Chris Marone, Paul Antony Selvadurai, and Elisa Tinti
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Science - Abstract
Abstract Earthquakes are rupture-like processes that propagate along tectonic faults and cause seismic waves. The propagation speed and final area of the rupture, which determine an earthquake’s potential impact, are directly related to the nature and quantity of the energy dissipation involved in the rupture process. Here, we present the challenges associated with defining and measuring the energy dissipation in laboratory and natural earthquakes across many scales. We discuss the importance and implications of distinguishing between energy dissipation that occurs close to and far behind the rupture tip, and we identify open scientific questions related to a consistent modeling framework for earthquake physics that extends beyond classical Linear Elastic Fracture Mechanics.
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- 2024
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35. Impact of emotional abuse on eating disorder psychopathology: A multiple mediation analysis
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Barone Eugenia, Carfagno Marco, Marafioti Niccolò, Bello Rosaria, Arsenio Eleonora, Marone Luigi, Volpicelli Antonio, Cascino Giammarco, and Monteleone Alessio Maria
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Eating disorders ,Childhood maltreatment ,Emotional abuse ,Psychopathology ,Mediation analysis ,Psychiatry ,RC435-571 - Abstract
Introduction: Childhood maltreatment, particularly emotional abuse (EA), has been identified as a significant risk factor for the development of eating disorders (EDs). This study investigated the association between EA and ED symptoms while considering multiple potential mediators. Methods: Participants included 151 individuals with Anorexia Nervosa (AN), 115 with Bulimia Nervosa (BN), and 108 healthy controls. The Childhood trauma questionnaire, the Toronto Alexithymia scale, the Behavioral inhibition System, and the Eating Disorder Inventory 2 scale were completed before treatment. A mediator path model was conducted in each group: EA was set as independent variable, eating symptoms as dependent variables and ineffectiveness, sensitivity to punishment, alexithymia, and impulsivity as mediators. Results: In individuals with AN, impulsivity emerged as a significant mediator between EA and desire for thinness and bulimic behaviors. Conversely, in individuals with BN, sensitivity to punishment was found to mediate the association between EA and dissatisfaction with one's body.Ineffectiveness and difficulty identifying emotions were identified as transdiagnostic mediators in both clinical groups. No mediation effect was found in healthy individuals. Discussion: The simultaneous assessment of multiple mediators in a unique model outlines the complex interplay between childhood EA and ED psychopathology. Improving ineffectiveness, emotion identification, sensitivity to punishment and impulsivity and exploring their relations with early emotional abuse may represent treatment targets in individuals with EDs and childhood trauma.
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- 2024
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36. Neutrophil exhaustion and impaired functionality in psoriatic arthritis patients
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Luca Modestino, Manuela Tumminelli, Ilaria Mormile, Leonardo Cristinziano, Annagioia Ventrici, Marialuisa Trocchia, Anne Lise Ferrara, Francesco Palestra, Stefania Loffredo, Gianni Marone, Francesca Wanda Rossi, Amato de Paulis, and Maria Rosaria Galdiero
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neutrophils ,neutrophil extracellular traps ,psoriatic arthritis ,inflammation ,innate immunity ,Immunologic diseases. Allergy ,RC581-607 - Abstract
BackgroundNeutrophils (polymorphonuclear leukocytes, PMNs) are the most abundant subtype of white blood cells and are among the main actors in the inflammatory response. Psoriatic arthritis (PsA) is a chronic inflammatory disease affecting both the axial and peripheral joints. Typically associated with psoriasis, PsA can also affect multiple systems and organs, including the nails and entheses. Despite the involvement of PMNs in PsA, their specific role in the disease remains poorly understood. This study aimed to characterize the biological functions of PMNs and neutrophil-related mediators in PsA patients.Materials and methods31 PsA patients and 22 healthy controls (HCs) were prospectively recruited. PMNs were isolated from peripheral blood and subjected to in vitro stimulation with lipopolysaccharide (LPS), N-Formylmethionyl-leucyl-phenylalanine (fMLP), tumor necrosis factor (TNF), phorbol 12-myristate 13-acetate (PMA), or control medium. Highly purified peripheral blood PMNs (>99%) were evaluated for activation status, reactive oxygen species (ROS) production, phagocytic activity, granular enzyme and neutrophil extracellular traps (NETs) release. Serum levels of matrix metalloproteinase-9 (MMP-9), myeloperoxidase (MPO), TNF, interleukin 23 (IL-23), and interleukin 17 (IL-17) were measured by ELISA. Serum Citrullinated histone H3 (CitH3) was measured as a NET biomarker.ResultsActivated PMNs from PsA patients displayed reduced activation, decreased ROS production, and impaired phagocytic activity upon stimulation with TNF, compared to HCs. PMNs from PsA patients also displayed reduced granular enzyme (MPO) and NET release. Serum analyses revealed elevated levels of MMP-9, MPO, TNF, IL-23, IL-17, and CitH3 in PsA patients compared to HCs. Serum CitH3 levels positively correlated with MPO and TNF concentrations, and IL-17 concentrations were positively correlated with IL-23 levels in PsA patients. These findings indicate that PMNs from PsA patients show reduced in vitro activation and function, and an increased presence of neutrophil-derived mediators (MMP-9, MPO, TNF, IL-23, IL-17, and CitH3) in their serum.ConclusionsTaken together, our findings suggest that PMNs from PsA patients exhibit an “exhausted” phenotype, highlighting their plasticity and multifaceted roles in PsA pathophysiology.
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- 2024
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37. The JAK1/JAK2 inhibitor ruxolitinib inhibits mediator release from human basophils and mast cells
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Remo Poto, Leonardo Cristinziano, Gjada Criscuolo, Caterina Strisciuglio, Francesco Palestra, Gianluca Lagnese, Antonio Di Salvatore, Gianni Marone, Giuseppe Spadaro, Stefania Loffredo, and Gilda Varricchi
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asthma ,basophil ,histamine ,IL-4 ,IL-13 ,mast cell ,Immunologic diseases. Allergy ,RC581-607 - Abstract
IntroductionThe Janus kinase (JAK) family includes four cytoplasmic tyrosine kinases (JAK1, JAK2, JAK3, and TYK2) constitutively bound to several cytokine receptors. JAKs phosphorylate downstream signal transducers and activators of transcription (STAT). JAK-STAT5 pathways play a critical role in basophil and mast cell activation. Previous studies have demonstrated that inhibitors of JAK-STAT pathway blocked the activation of mast cells and basophils.MethodsIn this study, we investigated the in vitro effects of ruxolitinib, a JAK1/2 inhibitor, on IgE- and IL-3-mediated release of mediators from human basophils, as well as substance P-induced mediator release from skin mast cells (HSMCs).ResultsRuxolitinib concentration-dependently inhibited IgE-mediated release of preformed (histamine) and de novo synthesized mediators (leukotriene C4) from human basophils. Ruxolitinib also inhibited anti-IgE- and IL-3-mediated cytokine (IL-4 and IL-13) release from basophils, as well as the secretion of preformed mediators (histamine, tryptase, and chymase) from substance P-activated HSMCs.DiscussionThese results indicate that ruxolitinib, inhibiting the release of several mediators from human basophils and mast cells, is a potential candidate for the treatment of inflammatory disorders.
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- 2024
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38. Pretrained Models for Multilingual Federated Learning
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Weller, Orion, Marone, Marc, Braverman, Vladimir, Lawrie, Dawn, and Van Durme, Benjamin
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Computer Science - Computation and Language - Abstract
Since the advent of Federated Learning (FL), research has applied these methods to natural language processing (NLP) tasks. Despite a plethora of papers in FL for NLP, no previous works have studied how multilingual text impacts FL algorithms. Furthermore, multilingual text provides an interesting avenue to examine the impact of non-IID text (e.g. different languages) on FL in naturally occurring data. We explore three multilingual language tasks, language modeling, machine translation, and text classification using differing federated and non-federated learning algorithms. Our results show that using pretrained models reduces the negative effects of FL, helping them to perform near or better than centralized (no privacy) learning, even when using non-IID partitioning., Comment: NAACL 2022
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- 2022
39. Forced expression of the non-coding RNA miR-17∼92 restores activation and function in CD28-deficient CD4+ T cells
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Dölz, Marianne, Hasiuk, Marko, Gagnon, John D, Kornete, Mara, Marone, Romina, Bantug, Glenn, Kageyama, Robin, Hess, Christoph, Ansel, K Mark, Seyres, Denis, Roux, Julien, and Jeker, Lukas T
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Biological Sciences ,Biomedical and Clinical Sciences ,Medicinal and Biomolecular Chemistry ,Chemical Sciences ,Immunology ,Genetics ,Biotechnology ,2.1 Biological and endogenous factors ,Biological sciences ,immunology ,molecular mechanism of gene regulation - Abstract
CD28 provides the prototypical costimulatory signal required for productive T-cell activation. Known molecular consequences of CD28 costimulation are mostly based on studies of protein signaling molecules. The microRNA cluster miR-17∼92 is induced by T cell receptor stimulation and further enhanced by combined CD28 costimulation. We demonstrate that transgenic miR-17∼92 cell-intrinsically largely overcomes defects caused by CD28 deficiency. Combining genetics, transcriptomics, bioinformatics, and biochemical miRNA:mRNA interaction maps we empirically validate miR-17∼92 target genes that include several negative regulators of T cell activation. CD28-deficient T cells exhibit derepressed miR-17∼92 target genes during activation. CRISPR/Cas9-mediated ablation of the miR-17∼92 targets Pten and Nrbp1 in naive CD28-/- CD4+ T cells differentially increases proliferation and expression of the activation markers CD25 and CD44, respectively. Thus, we propose that miR-17∼92 constitutes a central mediator for T cell activation, integrating signals by the TCR and CD28 costimulation by dampening multiple brakes that prevent T cell activation.
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- 2022
40. X-ray scattering tensor tomography based finite element modelling of heterogeneous materials
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Robert M. Auenhammer, Jisoo Kim, Carolyn Oddy, Lars P. Mikkelsen, Federica Marone, Marco Stampanoni, and Leif E. Asp
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Materials of engineering and construction. Mechanics of materials ,TA401-492 ,Computer software ,QA76.75-76.765 - Abstract
Abstract Among micro-scale imaging technologies of materials, X-ray micro-computed tomography has evolved as most popular choice, even though it is restricted to limited field-of-views and long acquisition times. With recent progress in small-angle X-ray scattering these downsides of conventional absorption-based computed tomography have been overcome, allowing complete analysis of the micro-architecture for samples in the dimension of centimetres in a matter of minutes. These advances have been triggered through improved X-ray optical elements and acquisition methods. However, it has not yet been shown how to effectively transfer this small-angle X-ray scattering data into a numerical model capable of accurately predicting the actual material properties. Here, a method is presented to numerically predict mechanical properties of a carbon fibre-reinforced polymer based on imaging data with a voxel-size of 100 μm corresponding to approximately fifteen times the fibre diameter. This extremely low resolution requires a completely new way of constructing the material’s constitutive law based on the fibre orientation, the X-ray scattering anisotropy, and the X-ray scattering intensity. The proposed method combining the advances in X-ray imaging and the presented material model opens for an accurate tensile modulus prediction for volumes of interest between three to six orders of magnitude larger than those conventional carbon fibre orientation image-based models can cover.
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- 2024
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41. Crustal permeability generated through microearthquakes is constrained by seismic moment
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Pengliang Yu, Ankur Mali, Thejasvi Velaga, Alex Bi, Jiayi Yu, Chris Marone, Parisa Shokouhi, and Derek Elsworth
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Science - Abstract
Abstract We link changes in crustal permeability to informative features of microearthquakes (MEQs) using two field hydraulic stimulation experiments where both MEQs and permeability evolution are recorded simultaneously. The Bidirectional Long Short-Term Memory (Bi-LSTM) model effectively predicts permeability evolution and ultimate permeability increase. Our findings confirm the form of key features linking the MEQs to permeability, offering mechanistically consistent interpretations of this association. Transfer learning correctly predicts permeability evolution of one experiment from a model trained on an alternate dataset and locale, which further reinforces the innate interdependency of permeability-to-seismicity. Models representing permeability evolution on reactivated fractures in both shear and tension suggest scaling relationships in which changes in permeability ( $$\Delta k$$ Δ k ) are linearly related to the seismic moment ( $$M$$ M ) of individual MEQs as $$\Delta k\propto M$$ Δ k ∝ M . This scaling relation rationalizes our observation of the permeability-to-seismicity linkage, contributes to its predictive robustness and accentuates its potential in characterizing crustal permeability evolution using MEQs.
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- 2024
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42. Stochastic Chaos and Predictability in Laboratory Earthquakes
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Gualandi, Adriano, Faranda, Davide, Marone, Chris, Cocco, Massimo, and Mengaldo, Gianmarco
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Nonlinear Sciences - Chaotic Dynamics - Abstract
Laboratory earthquakes exhibit characteristics of a low dimensional random attractor with a dimension similar to that of natural slow earthquakes. A model of stochastic differential equations based on rate and state-dependent friction explains the laboratory observations. We study the transition from stable sliding to stickslip events and find that aperiodic behavior can be explained by small perturbations in the stress state. Friction's nonlinear nature amplifies small scale perturbations, reducing the predictability of the otherwise periodic macroscopic dynamics.
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- 2022
43. Deep learning for laboratory earthquake prediction and autoregressive forecasting of fault zone stress
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Laurenti, Laura, Tinti, Elisa, Galasso, Fabio, Franco, Luca, and Marone, Chris
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Physics - Geophysics ,Computer Science - Computer Vision and Pattern Recognition - Abstract
Earthquake forecasting and prediction have long and in some cases sordid histories but recent work has rekindled interest based on advances in early warning, hazard assessment for induced seismicity and successful prediction of laboratory earthquakes. In the lab, frictional stick-slip events provide an analog for earthquakes and the seismic cycle. Labquakes are ideal targets for machine learning (ML) because they can be produced in long sequences under controlled conditions. Recent works show that ML can predict several aspects of labquakes using fault zone acoustic emissions. Here, we generalize these results and explore deep learning (DL) methods for labquake prediction and autoregressive (AR) forecasting. DL improves existing ML methods of labquake prediction. AR methods allow forecasting at future horizons via iterative predictions. We demonstrate that DL models based on Long-Short Term Memory (LSTM) and Convolution Neural Networks predict labquakes under several conditions, and that fault zone stress can be predicted with fidelity, confirming that acoustic energy is a fingerprint of fault zone stress. We predict also time to start of failure (TTsF) and time to the end of Failure (TTeF) for labquakes. Interestingly, TTeF is successfully predicted in all seismic cycles, while the TTsF prediction varies with the amount of preseismic fault creep. We report AR methods to forecast the evolution of fault stress using three sequence modeling frameworks: LSTM, Temporal Convolution Network and Transformer Network. AR forecasting is distinct from existing predictive models, which predict only a target variable at a specific time. The results for forecasting beyond a single seismic cycle are limited but encouraging. Our ML/DL models outperform the state-of-the-art and our autoregressive model represents a novel framework that could enhance current methods of earthquake forecasting., Comment: Published in https://www.sciencedirect.com/science/article/pii/S0012821X22004617
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- 2022
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44. Implementation of an antimicrobial stewardship program in the Vascular Surgery ward of a university tertiary care hospital in Pavia, Northern Italy
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Vecchia, Marco, Colaneri, Marta, Sacchi, Paolo, Marvulli, Lea Nadia, Salvaderi, Andrea, Lanza, Jessica, Boschini, Stefano, Ragni, Franco, Marone, Piero, Cutti, Sara, Muzzi, Alba, Marena, Carlo, Calvi, Monica, Scudeller, Luigia, Marone, Enrico Maria, and Bruno, Raffaele
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- 2023
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45. Physicians’ preferences for radioiodine treatment of differentiated thyroid cancer in Brazil: an observational study
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Rosália do Prado Padovani, Isabella Fagian Pansani, Marília Martins Silveira Marone, Fernanda Vaisman, Ana Luiza Silva Maia, José Miguel Silva Dora, Helton Estrela Ramos, Ana Amélia Fialho de Oliveira Hoff, and George Barbério Coura Filho
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Thyroid nodule ,thyroid neoplasms ,radiopharmaceuticals ,thyroid cancer, papillary thyroid carcinoma ,thyrotropin ,thyroid diseases ,Medicine ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
ABSTRACT Objective The aim of this observational, cross-sectional study was to investigate physicians’ preferences for radioiodine (RAI) treatment in patients with differentiated thyroid cancer (DTC) in Brazil and the factors influencing RAI indications. Materials and methods A survey was distributed to physicians potentially involved in DTC care in Brazil to understand the factors influencing RAI indications. The survey collected information on the profiles of the physicians, along with the characteristics of their workplaces and their preferences regarding RAI indications in three hypothetical clinical cases. Cases 1, 2, and 3 described the cases of patients with DTC and variations to the case that included different scenarios to assess how the respondents would change their RAI recommendations. The analysis included the RAI indications across different medical specialties. Results A total of 175 physicians answered the survey. There was considerable variability in RAI recommendations in all three cases. The training background influenced the respondents' preferences for RAI indications and their approaches to preparing patients for RAI treatment. Conclusion The findings of this study reaffirm the need for a Brazilian consensus among physicians across multiple specialties to help guide health care professionals treating patients with DTC in Brazil.
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- 2024
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46. Age management and intergenerational education in health. Artificial intelligence and virtual
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Francesca Marone and Maria Navarra
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Age Management ,healthcare contexts ,active policies ,continuous training ,sanità ,politiche attive ,Education - Abstract
In recent years, age management practices and strategies have become widely diffused since today the valorization of people according to their age represents, a fundamental aspect for organisations, which are required to understand in depth the dynamics of generational belonging for a correct definition of their work and training policies. Population ageing is a phenomenon shared by many countries, especially those in Europe. In health care contexts, the ageing of workers and their co-habitation of organisational contexts with colleagues belonging to other generations demands effective equal opportunities for training and skills development policies to improve both the quality of work and the quality of services offered. To this purpose, communities of practice, including virtual ones, become a training device to be explored, especially looking at the latest developments in artificial intelligence. Age management e formazione intergenerazionale in medicina. Intelligenza artificiale e comunità di pratica virtuali. Negli ultimi anni, le pratiche e le strategie di age management si sono largamente diffuse poiché la valorizzazione delle persone in funzione della loro età rappresenta, oggi, un aspetto fondamentale per le organizzazioni, chiamate a comprendere in modo approfondito le dinamiche dell’appartenenza generazionale per una corretta definizione e valorizzazione delle proprie politiche di lavoro e formazione. L’invecchiamento della popolazione è un fenomeno che accomuna molti paesi, soprattutto quelli europei. Nei contesti sanitari, l’invecchiamento degli operatori e la loro co-abitazione dei contesti organizzativi con colleghi appartenenti ad altre generazioni richiede politiche efficaci di pari opportunità e di formazione e sviluppo delle competenze per migliorare sia la qualità del lavoro sia la qualità dei servizi offerti. A tale scopo, le comunità di pratica, anche quelle virtuali, divengono un dispositivo formativo da esplorare, soprattutto guardando ai più recenti sviluppi dell’intelligenza artificiale.
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- 2024
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47. 616 Comparison of optical and ultrasound imaging in lupus arthritis
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Xin Wang, Anca Askanase, Laura Geraldino-Pardilla, Wei Tang, Leila Khalili, Alessandro Marone, Andreas Hielscher, Sean Inzerillo, Shane Murray, Moegammad Bardien, Vedant Gaikwad, and Stephen Kim
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Immunologic diseases. Allergy ,RC581-607 - Published
- 2024
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48. Everything Is All It Takes: A Multipronged Strategy for Zero-Shot Cross-Lingual Information Extraction
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Yarmohammadi, Mahsa, Wu, Shijie, Marone, Marc, Xu, Haoran, Ebner, Seth, Qin, Guanghui, Chen, Yunmo, Guo, Jialiang, Harman, Craig, Murray, Kenton, White, Aaron Steven, Dredze, Mark, and Van Durme, Benjamin
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Computer Science - Computation and Language - Abstract
Zero-shot cross-lingual information extraction (IE) describes the construction of an IE model for some target language, given existing annotations exclusively in some other language, typically English. While the advance of pretrained multilingual encoders suggests an easy optimism of "train on English, run on any language", we find through a thorough exploration and extension of techniques that a combination of approaches, both new and old, leads to better performance than any one cross-lingual strategy in particular. We explore techniques including data projection and self-training, and how different pretrained encoders impact them. We use English-to-Arabic IE as our initial example, demonstrating strong performance in this setting for event extraction, named entity recognition, part-of-speech tagging, and dependency parsing. We then apply data projection and self-training to three tasks across eight target languages. Because no single set of techniques performs the best across all tasks, we encourage practitioners to explore various configurations of the techniques described in this work when seeking to improve on zero-shot training., Comment: EMNLP 2021
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- 2021
49. Reporting or Marketing? The Discourse on Technology in Educational Landscape Reports
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Bruna Damiana Heinsfeld and Vittorio Marone
- Abstract
Educational landscape reports have historically contributed to advocating for changes that would benefit learners, including recommendations for digital technologies and their use. The COVID-19 pandemic has considerably affected education, pushing institutions to quickly adapt to the emergency through the use of technology. This scenario has impacted the discourse on educational technologies and their implementation. Seeking to better understand this discourse and its potential impact on education, drawing from a range of scholarly literature--including discourse analysis, critical discourse studies, and studies on educational technology and change--this study focuses on how technology has been presented in a major yearly publication in 2020, 2021, and 2022. This study adds to the literature by presenting findings that show that technology corporations can play a crucial role in shaping educational technology discourses in landscape reports, including how technology should be adopted and the very future of higher education. Additionally, it reinforces the need for critical awareness of how different publications may push corporate agendas disguised as impartial expert guidance.
- Published
- 2023
- Full Text
- View/download PDF
50. Heitt Mjölnir: a heated miniature triaxial apparatus for 4D synchrotron microtomography
- Author
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Damien Freitas, Ian B. Butler, Stephen C. Elphick, James Gilgannon, Roberto E. Rizzo, Oliver Plümper, John Wheeler, Christian M. Schlepütz, Federica Marone, and Florian Fusseis
- Subjects
synchrotron x-ray microtomography ,experimental geosciences ,rock deformation ,fluid–rock interactions ,in situ experiments ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Third- and fourth-generation synchrotron light sources with high fluxes and beam energies enable the use of innovative X-ray translucent experimental apparatus. These experimental devices access geologically relevant conditions whilst enabling in situ characterization using the spatial and temporal resolutions accessible at imaging beamlines. Here, Heitt Mjölnir is introduced, a heated miniature triaxial rig based on the design of Mjölnir, but covering a wider temperature range and larger sample volume at similar pressure capacities. This device is designed to investigate coupled thermal, chemical, hydraulic and mechanical processes from grain to centimetre scales using cylindrical samples of 10 mm × 20 mm (diameter × length). Heitt Mjölnir can simultaneously reach confining (hydraulic) pressures of 30 MPa and 500 MPa of axial stress with independently controlled sample pore fluid pressure < 30 MPa. This internally heated apparatus operates to temperatures up to 573 K with a minimal vertical thermal gradient in the sample of
- Published
- 2024
- Full Text
- View/download PDF
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