31 results on '"Maria Atta"'
Search Results
2. A case of chronic neutrophilic leukemia and multiple myeloma showing the benefits of lenalidomide and cyclophosphamide therapy in treating both conditions
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Kathryn McVinnie, Andrew Innes, Elisabet Nadal‐Melsio, Maria Atta, and Simona Deplano
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Hematology - Published
- 2022
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3. Non-crystalline light chain proximal tubulopathy, a morphologically protean entity
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Andreas Kousios, Sarah Blakey, Linda Moran, Maria Atta, Rawya Charif, Neill Duncan, Andrew Smith, Frederick W K Tam, Jeremy B Levy, Aristeidis Chaidos, and Candice Roufosse
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Transplantation ,Nephrology - Abstract
Background Light chain proximal tubulopathy (LCPT) is a rare form of paraprotein-related disease, occurring in two main histopathological forms; crystalline and non-crystalline. The clinicopathological features, treatment strategies and outcomes, especially of the non-crystalline form, are not well described. Methods Single-centre retrospective case series of 12 LCPT patients, 5 crystalline and 7 non-crystalline, between 2005-2021. Observations Median age was 69.5 years (range, 47-80). 10 patients presented with CKD and significant proteinuria (median eGFR of 43.5 ml/min/1.73m2; uPCR 328 mg/mmol). Only 6 patients had known haematological disease at the time of renal biopsy. Multiple myeloma (MM) was diagnosed in 7 cases and MGRS in 5. A clone was detected in all cases combining serum/urine electrophoresis and free LC assays. Crystalline and non-crystalline variants had similar clinical presentations. For the non-crystalline variant, a diagnosis was reached based on combination of CKD without other cause, haematological work-up, LC restriction on IF and abnormalities on EM. Nine of 12 patients received clone-directed treatment. Patients who achieved haematological response (including all non-crystalline LCPT) had improved renal outcomes over a median follow-up of 79 months. Conclusions The non-crystalline variant may go unrecognised because of its subtle histopathological features and requires EM to distinguish it from “excessive LC resorption without tubular injury”. Clone-directed treatment with good haematological response improves renal outcomes in both variants but limited data exist in MGRS. Multi-centre prospective studies are needed to better define the clinico-pathological characteristics associated with poor outcomes and optimize treatment strategies in patients with MGRS.
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- 2023
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4. High patient satisfaction and increased physical activity following a remote multidisciplinary team multiple myeloma clinic
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Catherine S. Y. Lecat, Abigail Fisher, Maria Atta, Marquita Camilleri, Orla McCourt, Joanne Land, Sarah Worthington, Alyse Hart, Angela Daniel, Inayah Uddin, Charlotte Roche, Holger W. Auner, and Kwee Yong
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Oncology - Abstract
Purpose Patients with multiple myeloma suffer from disease-related complications such as bone destruction, toxicities from repeated therapies and age-related co-morbidities. With improved treatment options, patients are living longer and have specific survivorship needs such as low exercise levels that need to be addressed. In this study, we designed, implemented and evaluated a multidisciplinary team (MDT) myeloma clinic that provided participants with tailored exercise and lifestyle advice. Methods The Promoting Individualised Self-Management and Survivorship (PrISMS) clinic was set up in two UK myeloma centres. This remote MDT clinic comprised of a doctor, a nurse specialist and a physiotherapist. Patients were required to complete blood tests and a questionnaire about their symptoms and concerns before each consultation. Patient-reported outcome measures were captured using validated questionnaires. Patient feedback was collected using a specially designed survey and structured telephone interviews. Results Sixty-one patients were enrolled in the pilot clinic with 210 consultations held during the study period. Nine patients had disease progression and were referred safely back to face-to-face clinics. There was a significant improvement in patients’ exercise score (p = 0.02) after PrISMS clinic. Patient satisfaction was high, with 83% feeling more confident in self-managing myeloma after PrISMS clinic. Conclusion PrISMS clinic is safe and feasible, with high patient compliant and acceptability. It empowers patients to self-manage their condition and encourages physical activity, which is associated with improved quality of life and fatigue level. Future randomised controlled trials will help to confirm its benefits on patient clinical outcomes and cost-effectiveness.
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- 2023
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5. Multi-objective optimization model of autonomous minibus considering passenger arrival reliability and travel risk
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Zhicheng Jin, Haoyang Mao, Di Chen, Hao Li, Huizhao Tu, Ying Yang, and Maria Attard
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Autonomous minibus ,Passenger arrival reliability ,Multi-objective optimization ,Adaptive large neighborhood search algorithm ,Bus scheduling and routing ,Transportation engineering ,TA1001-1280 - Abstract
The advancement of self-driving technologies facilitates the emergence of autonomous minibuses (ABs) in public transportation, which could provide flexible, reliable, and safe mobility services. This study develops an AB routing and scheduling model considering each passenger’s arrival reliability and travel risk. Firstly, to guarantee each passenger’s arrival on time, the arrival reliability (a predetermined threshold of on-time arrival probability of α = 0.9) is included in the constraints. Secondly, three objectives, including system costs, greenhouse gas (GHG) emissions, and travel risk, are optimized in the model. To assess the travel risk of ABs, an enhanced method based on kernel density estimation (KDE) is proposed. Thirdly, an advanced multi-objective adaptive large neighborhood search algorithm (MOALNS) is designed to find the Pareto optimal set. Finally, experiments are conducted in Shanghai to validate model performance. Results show that it can decrease GHG emissions (−2.12%) and risk (−9.47%), while only increasing costs by 2.02%. Furthermore, the proposed arrival reliability constraint can improve an average of 14.70% of passengers to meet their arrival reliability requirement (α = 0.9).
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- 2024
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6. On-demand automated bus services: Opportunities and challenges
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Huizhao Tu, Maria Attard, Ying Yang, Karyn Scerri, Adrian Muscat, and Hao Li
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Transportation engineering ,TA1001-1280 - Published
- 2024
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7. Chartering policies and operational efficiency of shipping lines: exploring strategic changes in response to the COVID-19 pandemic
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Enrico D’agostini, Sohyun Jo, and Maria Attard
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Shipping lines ,Chartering strategies ,COVID-19 ,Efficiency ,Data envelopment analysis (DEA) ,Shipment of goods. Delivery of goods ,HF5761-5780 ,Transportation and communications ,HE1-9990 - Abstract
Abstract Shipping is a highly cyclical, volatile, and unpredictable industry. In recent history, economic shocks like the COVID-19 pandemic have heavily disrupted supply chains and tested the resilience and adaptability of shipping lines from both operational and financial perspectives. Therefore, the commercial success of shipping lines is increasingly determined by an optimal balance between reliable logistics operations and financial performance. Given this, chartering strategies of shipping lines are pivotal in achieving fleet optimisation and financial sustainability. Using a Mann–Whitney U test and a data envelopment analysis (DEA), this study provides a view on chartering strategies and efficiency levels of shipping lines in response to the COVID-19 pandemic. The findings reveal that chartering strategies have changed considerably since 2020 and that most shipping lines have pursued a peculiar strategy with a different mix in terms of chartered vessels’ size, age, and period of charter. Shipping lines which showed the most marked differences in chartering strategies also yielded higher efficiency scores under DEA, whereas those that did not sustain large changes scored lower in terms of efficiency. This study provides significant insights on and managerial guidance for understanding and benchmarking chartering strategies and their impact on efficiency gains.
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- 2024
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8. Chromatin-based, in cis and in trans regulatory rewiring underpins distinct oncogenic transcriptomes in multiple myeloma
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Ian Sudbery, Kanagaraju Ponnusamy, Aristeidis Chaidos, Holger W. Auner, Valentina S. Caputo, Philippa C. May, Alexia Katsarou, Marco Bua, Xiaolin Xiao, Maria Papaioannou, Anastasios Karadimitris, Jaime Alvarez-Benayas, Irene Roberts, Maria Atta, Evdoxia Hatjiharissi, and Nikolaos Trasanidis
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Carcinogenesis ,Gene regulatory network ,General Physics and Astronomy ,Myeloma ,Gene regulatory networks ,Transcriptome ,hemic and lymphatic diseases ,ELEMENTS ,Cyclin D2 ,Cyclin D1 ,Multiple myeloma ,Multidisciplinary ,PROLIFERATION ,Chromatin ,Gene Expression Regulation, Neoplastic ,Multidisciplinary Sciences ,GENOME ,Enhancer Elements, Genetic ,Proto-Oncogene Proteins c-maf ,Science & Technology - Other Topics ,Systems biology ,Multiple Myeloma ,PROTEINS ,Science ,Plasma Cells ,Bone Marrow Cells ,Computational biology ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,CLASSIFICATION ,Cell Line, Tumor ,medicine ,Humans ,Enhancer ,Gene ,Transcription factor ,Science & Technology ,Gene Expression Profiling ,General Chemistry ,Histone-Lysine N-Methyltransferase ,medicine.disease ,Leukemia, Lymphocytic, Chronic, B-Cell ,Survival Analysis ,Repressor Proteins ,Case-Control Studies ,Ectopic expression - Abstract
Multiple myeloma is a genetically heterogeneous cancer of the bone marrow plasma cells (PC). Distinct myeloma transcriptome profiles are primarily driven by myeloma initiating events (MIE) and converge into a mutually exclusive overexpression of the CCND1 and CCND2 oncogenes. Here, with reference to their normal counterparts, we find that myeloma PC enhanced chromatin accessibility combined with paired transcriptome profiling can classify MIE-defined genetic subgroups. Across and within different MM genetic subgroups, we ascribe regulation of genes and pathways critical for myeloma biology to unique or shared, developmentally activated or de novo formed candidate enhancers. Such enhancers co-opt recruitment of existing transcription factors, which although not transcriptionally deregulated per se, organise aberrant gene regulatory networks that help identify myeloma cell dependencies with prognostic impact. Finally, we identify and validate the critical super-enhancer that regulates ectopic expression of CCND2 in a subset of patients with MM and in chronic lymphocytic leukemia., Despite extensive genetic heterogeneity, nearly half of all multiple myeloma (MM) cases are driven by cyclin D2 (CCND2) over-expression. Here the authors dissect the chromatin landscape of MM to provide insights into the transcriptional regulatory landscape driving MM and divergent transcriptomes corresponding to different MM genetic subtypes.
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- 2021
9. Masked crystalline light chain tubulopathy and podocytopathy with focal segmental glomerulosclerosis: a rare MGRS-associated renal lesion
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Linda B. Moran, Maria Atta, H. Terence Cook, Frederick W.K. Tam, Stephen P. McAdoo, Sarah Blakey, Candice Roufosse, Aristeidis Chaidos, Andreas Kousios, Imperial College Healthcare NHS Trust- BRC Funding, and Imperial College Healthcare NHS Trust
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Renal lesion ,Pathology ,medicine.medical_specialty ,Histology ,Paraproteinemias ,Immunoglobulin light chain ,Kidney ,light chain tubulopathy ,Pathology and Forensic Medicine ,podocytopathy ,Focal segmental glomerulosclerosis ,Tubulopathy ,Medicine ,Humans ,focal segmental glomerulosclerosis ,Science & Technology ,business.industry ,Glomerulosclerosis, Focal Segmental ,Podocytes ,1103 Clinical Sciences ,General Medicine ,Cell Biology ,Middle Aged ,medicine.disease ,Monoclonal gammopathy of renal significance ,business ,Life Sciences & Biomedicine - Abstract
Monoclonal Gammopathy of Renal Significance (MGRS) encompasses a wide spectrum of histopathology. Characterizing rare forms of MGRS-related renal pathology remains work in progress. Light chain crystalline podocytopathy in the context of MGRS, either in isolation or combined with proximal tubulopathy (LCPT) has rarely been described. Unravelling MGRS pathologies is critical for patient management and often requires ancillary techniques for antigen retrieval to demonstrate light chain (LC) restriction on immunofluorescence (IF).
- Published
- 2021
10. Identification of occult cerebral microbleeds in adults with immune thrombocytopenia
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Deena Paul, Thomas Young, James B. Bussel, Camelia Vladescu, Asad Luqmani, Adam D. Waldman, Melanie A. Morrison, Alice C. J. Hart, David J. Sharp, Nichola Cooper, Maria Atta, Amna Malik, National Institute for Health Research, Imperial College Healthcare NHS Trust- BRC Funding, and Imperial Health Charity
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Adult ,Male ,medicine.medical_specialty ,PURPURA ,Immunology ,Neuroimaging ,030204 cardiovascular system & hematology ,Biochemistry ,Gastroenterology ,03 medical and health sciences ,symbols.namesake ,0302 clinical medicine ,Internal medicine ,medicine ,Humans ,Platelet ,Prospective Studies ,Poisson regression ,Adverse effect ,Prospective cohort study ,1102 Cardiorespiratory Medicine and Haematology ,Aged ,Cerebral Hemorrhage ,Aged, 80 and over ,Purpura, Thrombocytopenic, Idiopathic ,Hematology ,Science & Technology ,medicine.diagnostic_test ,Platelet Count ,business.industry ,Magnetic resonance imaging ,1103 Clinical Sciences ,Cell Biology ,Middle Aged ,Magnetic Resonance Imaging ,Occult ,PREVALENCE ,Natural history ,BLEEDING SCORE ,Cross-Sectional Studies ,symbols ,RISK-FACTORS ,1114 Paediatrics and Reproductive Medicine ,Female ,business ,Life Sciences & Biomedicine ,030217 neurology & neurosurgery ,MRI - Abstract
Management of symptoms and prevention of life-threatening haemorrhage in Immune thrombocytopenia (ITP) must be balanced against adverse effects of available therapies. Since current treatment guidelines based on platelet count are confounded by variable bleeding phenotypes, there is a need to identify new objective markers of disease severity for improved treatment stratification. In this cross-sectional, prospective study of 49 patients with ITP and lowest recorded (nadir) platelet counts below 30 x 109/L, we used Susceptibility-Weighted Magnetic Resonance Imaging (SWI) to detect cerebral microbleeds (CMBs) as a marker of occult haemorrhage. CMBs were detected using a semi-automated method and correlated with clinical metadata using multivariate Poisson regression analysis. Lobar CMBs were identified in 43% (21/49); prevalence increased with decreasing nadir platelet count (15/25 15x109/L), and was associated with longer disease duration (p=7x10-6), lower nadir platelet count (p=0.005), lower platelet count at time of MRI (p=0.029), and higher organ bleeding scores (p=0.028). Mucosal and skin bleeding scores, number of previous treatments, age and sex were not associated with CMBs. Occult cerebral microhaemorrhage is common in patients with moderate to severe ITP. Strong associations with ITP duration may reflect CMB accrual over time or more refractory disease. Although associated, neither low platelet count or bleeding scores predict CMBs. SWI could therefore provide an additional non-invasive biomarker of haemorrhagic phenotype, and potential adjunct for treatment stratification. Further longitudinal studies in children and adults will allow greater understanding of the natural history, and clinical and prognostic significance of CMBs.
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- 2020
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11. Over-accessible chromatin links myeloma initiating genetic events to oncogenic transcriptomes and aberrant transcription factor regulatory networks
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Nikolaos Trasanidis, Evdoxia Hatjiharissi, Holger W. Auner, Xiaolin Xiao, Sudbery Im Im, Alexia Katsarou, Papaioannou M M, Irene Roberts, Maria Atta, Kanagaraju Ponnusamy, Aristeidis Chaidos, Jaime Alvarez-Benayas, Anastasios Karadimitris, Valentina S. Caputo, Marco Bua, and Philippa C. May
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Transcriptome ,Genetic heterogeneity ,medicine ,Ectopic expression ,Computational biology ,Biology ,Enhancer ,medicine.disease ,Gene ,Transcription factor ,Multiple myeloma ,Chromatin - Abstract
Multiple myeloma is a genetically heterogeneous cancer of the bone marrow plasma cells (PC). Myeloma initiating genetic events define subgroups (MIE) and drive distinct oncogenic transcriptomes that converge into a mutually exclusive overexpression of CCND1 and CCND2 oncogenes. Here, with reference to normal PC, we dissect how MIE impact the chromatin regulatory landscape of MM. We find that chromatin accessibility combined with transcriptome profiling classifies myeloma genetic subgroups, while in a topologically constrained manner, distal rather than proximal regulatory elements influence myeloma transcriptomes. Across and within MIE-defined subgroups, genes and pathways critical for myeloma biology can be linked to developmentally activated or de novo formed enhancers. We show that existing transcription factors, co-opted to organise highly ordered, aberrant regulatory networks, generate known and novel myeloma cell dependencies and help identify prognostic markers. Finally, we discover and functionally validate the critical enhancer that regulates ectopic expression of CCND2 in MM.
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- 2020
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12. Ethnic Disparities in Waldenström's Macroglobulinaemia in the United Kingdom - Analysis from the Wmuk Rory Morrison Registry
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Helen McCarthy, Deborah Turner, Nicola Crosbie, Nilima Parry-Jones, Simona Gatto, Roger G. Owen, Kim Linton, Shirley D'Sa, Jahanzaib Khwaja, Charalampia Kyriakou, Maria Atta, Suzanne O Arulogun, Aisha S Patel, Kirsty Cuthill, Guy Pratt, Jaimal Kothari, Josephine Crowe, Agapi Parcharidou, Jindriska Lindsay, Dima El-Sharkawi, and Jeffery L. Smith
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Kingdom ,History ,Immunology ,Ethnic group ,Ethnology ,Cell Biology ,Hematology ,Biochemistry - Abstract
Introduction: Waldenström's Macroglobulinaemia (WM) is a rare indolent B-cell lymphoma characterised by lymphoplasmacytic infiltrate with an IgM paraproteinaemia. Approximately 400 patients (pts) are diagnosed annually in the United Kingdom (UK). National and regional registries provide important insights on the epidemiology and clinical features of this distinct uncommon disorder. Previous authors from the United States have reported significant differences in age at diagnosis and overall survival (OS) in WM between ethnic groups from Surveillance, Epidemiology and End Results data [1]. We aimed to determine baseline demographics, symptoms and survival outcomes across different ethnic groups in the UK. Methods: We retrospectively reviewed data from the WMUK Rory Morrison Registry, collating descriptive data of WM as well as non-IgM Lymphoplasmacytic lymphoma (LPL) cases from 20 centres across the UK, diagnosed between June 1978 and May 2021. Research ethics approval was obtained. Results: 732 pts with documented ethnicity were included here. Ethnicity was categorised in accordance with the UK National Census. Those other than the White cohort (662/732; 90%) were collectively termed 'Ethnic Minorities' (EM) (70/732; 9%): 39/70 (56%) Asian (13 Indian, 6 Chinese, 4 Pakistani, 16 other); 19/70 (27%) Mixed (1 White & Black African, 1 White & Asian, 1 Arab, 16 other); 12/70 (17%) Black (6 Caribbean, 3 African, 3 other). Baseline characteristics are displayed in table 1. EM presented at a significantly younger age compared to White cohort (60 vs 64 years, p=0.01) and had a significantly lower paraprotein at diagnosis (11 vs 18g/L, p=0.05). MYD88 L265P mutation tested in 250 pts (34%): positive in the majority 218/250 (87%) and notably less common in EM (p=0.09), most significantly in the Asian cohort compared to White (67% v 88%, p=0.01). The EM cohort had a smaller proportion of WM diagnoses compared to White cohort (77% vs 93%, p=0.02) with the Asian cohort accounting for the highest proportion of non-IgM LPL (15% vs 4%, p=0.002). Bone marrow trephine infiltration at diagnosis was lower in the EM cohort compared to the White cohort, although not statistically significant (25% vs 37%, respectively; p=0.10). IPSSWM scores were similar throughout. Approximately half of both the White & EM cohorts were asymptomatic at diagnosis. The most common presenting symptoms in EM were anaemia-related (10/34; 29%), B symptoms (6/34; 18%) and fatigue (4/34; 12%). 6/18 (33%) of Asians presented with cryoglobulinaemia, amyloid, nephropathy or acquired von Willebrand's Disease. Of EM, 51/70 (73%) had treatment, 35/51 (69%) within the first year from diagnosis with time to treatment 2 months (range 0-364). Time to next therapy was 14 months. Median lines of therapy were 2 (range 1-8). The most common indication for first line therapy was lymphoma-related (16/39; 41%) followed by paraprotein-related (peripheral neuropathy, hyperviscosity and autoimmune) (13/39; 33%). First line therapies included Bendamustine-Rituximab (BR; 8/49; 16%), Dexamethasone Rituximab Cyclophosphamide (DRC; 7/49; 14%) and R-CHOP (5/49; 10%) with smaller proportions receiving Rituximab monotherapy, Cladribine + Rituximab or Fludarabine + Cyclophosphamide + Rituximab (FCR) (3/49 (6.1% each). Two of 41 (5%) of EM had first treatment as a part of a clinical trial, compared to 16/156 (10%) of the White cohort (p=0.28). Response to first line therapy was similar between the White & EM cohorts (Table 1). For EM, at a median follow up of 7 years, 17 died (1/17; 6% disease related). Median OS was not reached (Figure 1). Estimated 5-year and 10- year OS was 91% (95% CI 96-80%) and 75% (95% CI 85-60%), respectively. Conclusions: This first report on ethnic disparities in WM and non-IgM LPL in the UK identified key differences in presentation of disease. Ethnic minorities present at a younger age, with a lower paraprotein. The Asian cohort had a greater proportion of non-IgM LPL cases and fewer MYD88 mutated cases. A small proportion of Ethnic Minorities have treatment on a clinical trial which may warrant further attention. Further analysis including associations with socioeconomic status, deprivation indices and comorbidities are ongoing. Ailawadhi, Sikander et al. "Outcome disparities among ethnic subgroups of Waldenström's macroglobulinemia: a population-based study." Oncology vol. 86,5-6 (2014): 253-62. doi:10.1159/000360992 Disclosures McCarthy: Janssen: Honoraria; Astra zenica pharmaceuticals: Honoraria; Amgen: Honoraria. Pratt: Amgen: Consultancy; Binding Site: Consultancy; BMS/Celgene: Consultancy; Gilead: Consultancy; Janssen: Consultancy; Takeda: Consultancy. El-Sharkawi: AbbVie: Honoraria, Other: Travel Support, Ad boards; AstraZeneca: Honoraria, Other: Ad boards; Janssen: Honoraria, Other: Ad boards; Roche: Honoraria; Takeda: Honoraria; Novartis: Other: Travel Support; ASTEX: Other: Ad boards; Beigene: Other: Ad boards; Kyowa Kirin: Other: Ad boards. Linton: Genmab: Consultancy, Membership on an entity's Board of Directors or advisory committees, Research Funding; Roche: Consultancy, Honoraria, Membership on an entity's Board of Directors or advisory committees, Research Funding; Aptitude Health: Honoraria; Hartley Taylor: Honoraria; Celgene: Research Funding; BeiGene: Research Funding; University of Manchester: Current Employment. Gatto: Roche: Consultancy. D'Sa: Janssen Cilag: Honoraria, Research Funding; BeiGene: Honoraria, Research Funding; Sanofi: Honoraria.
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- 2021
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13. Thrombocytopenia in critically ill patients with severe sepsis/septic shock: Prognostic value and association with a distinct serum cytokine profile
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Maria Atta, Ioanna Dimopoulou, Konstantinos Gkirkas, Frantzeska Frantzeskaki, Anastasia Bartzeliotou, George Dimitriadis, Ioannis Papassotiriou, Panagiotis Tsirigotis, Maria Stamouli, Spiros Chondropoulos, and Nikolaos Papanikolaou
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Adult ,Male ,Critical Care ,Critical Illness ,030204 cardiovascular system & hematology ,Critical Care and Intensive Care Medicine ,Receptors, Urokinase Plasminogen Activator ,law.invention ,Sepsis ,03 medical and health sciences ,0302 clinical medicine ,law ,medicine ,Humans ,Hospital Mortality ,Prospective Studies ,Prospective cohort study ,Aged ,Greece ,Septic shock ,business.industry ,Cell adhesion molecule ,Incidence ,Interleukin-8 ,030208 emergency & critical care medicine ,Middle Aged ,Prognosis ,Intercellular adhesion molecule ,medicine.disease ,Thrombocytopenia ,Intensive care unit ,ROC Curve ,SuPAR ,Immunology ,Cytokines ,Female ,business ,Plasminogen activator ,Biomarkers - Abstract
The purpose of the study is to evaluate the incidence, association with serum cytokine profile, and prognostic value of thrombocytopenia, in critically ill patients with severe sepsis/septic shock.A cohort of 105 consecutive patients admitted in intensive care unit was included in our analysis. Serum levels of intercellular adhesion molecule, vascular cell adhesion molecule, interferon γ, interleukin 8, and soluble form of the urokinase-type plasminogen activator receptor (suPAR) were measured.Thrombocytopenia was observed in 53% of patients at the time of admission. Platelet counts showed a statistically significant negative correlation with serum levels of intercellular adhesion molecule, suPAR, and interleukin 8 (P.0001). In multivariate analysis, high Acute Physiological and Chronic Health Evaluation II score, high serum suPAR, and low platelet counts were associated with increased mortality, and receiver operating characteristic curve analysis was used to determine the best cutoff value for mortality prediction. Each variable with a value above or below the predefined cutoff levels were given 1 point. Patients were categorized in risk groups based on total point score. High-risk (2-3), intermediate-risk (1), and low-risk (0 points) groups consisted of 43%, 22%, and 35% and 28-day mortality was observed in 69%, 26%, and 3% of the patients in each group, respectively.Thrombocytopenia is associated with poor prognosis and a distinct serum cytokine profile.
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- 2016
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14. People as planners: Stakeholder participation in the street experimentation process using a virtual urban living lab
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Karyn Scerri and Maria Attard
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Walking ,Stakeholders ,Urban mobility ,Car dependence ,Virtual urban living lab ,Malta ,City planning ,HT165.5-169.9 ,Transportation engineering ,TA1001-1280 - Abstract
The creation and design of intervention for street experimentation is in itself a key challenge in sustainable urban mobility to effectively encourage a modal shift from high car dependence to more active, non-polluting modes of transport. Understanding the needs of the community, including the diverse stakeholders at play, is crucial in implementing successful street experiments that can ultimately manifest into more permanent and systemic change. This study aims to address a current gap between stakeholders and the community in the street experimentation process within the context of the principal urban area of Malta, a car-dependent Euro-Mediterranean island. By collecting initial input from the community and several key stakeholders, a virtual platform to engage the local community is created; a virtual urban living lab (VULL). The VULL is tested in a workshop setting as a method for the collection and visualisation of data in the process of street experimentation. The VULL offers an interactive space for participants to identify barriers that discourage walking and explore and evaluate ideas of street experimentation for the local urban environment. A discussion of preliminary findings from the community's direct input and feedback sheds light on the benefits and challenges of using virtual platforms for stakeholder and community participation in the street experimentation process. The paper concludes by proposing VULLs as a valuable tool for city leaders, urban planners and designers to effectively engage with stakeholders and test new solutions to the complex and pressing issues of urban mobility and public space.
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- 2023
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15. A puzzling case of methemoglobinemia
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Audrey Morris, Barbara J. Bain, Maria Atta, and D. Mark Layton
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Adult ,medicine.medical_specialty ,business.industry ,Erythrocytes, Abnormal ,Hematology ,Methemoglobinemia ,medicine.disease ,Dermatology ,Erythrocyte Inclusions ,medicine ,Humans ,Female ,business - Published
- 2017
16. Distinct Chromatin Accessibility Changes, Aberrant Transcription Factor Networks Combined with Novel Oncogenic Enhancers Characterise Myeloma-Initiating Genetic Events
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Maria Papaioannou, Nikolaos Trasanidis, Ian Sudbery, Philippa C. May, Xiaolin Xiao, Irene Roberts, Anastasios Karadimitris, Kanagaraju Ponnusamy, Aristeidis Chaidos, Valentina S. Caputo, Marco Bua, Evdoxia Hatjiharissi, Maria Atta, Alexia Katsarou, Holger W. Auner, and Jaime Alvarez-Benayas
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biology ,Immunology ,RNA ,Chromosomal translocation ,Cell Biology ,Hematology ,medicine.disease ,Biochemistry ,Chromatin ,Histone ,Cyclin D1 ,Cancer research ,biology.protein ,medicine ,Precordial catch syndrome ,Enhancer ,Transcription factor - Abstract
In multiple myeloma (MM), a malignancy of the bone marrow plasma cells (BMPC), hyperdiploidy (HY) and oncogene over-expression via chromosomal translocation [including CCND1- t(11;14), MAF- t(14;16), MMSET-t(4;14)] are the primary myeloma initiating events (MIE) that drive distinct transcriptional programs. These are further shaped by secondary SNV and CNV events. This genetic heterogeneity converges, in most cases, to a functionally dichotomous state of CCND1 or CCND2 overexpression. The molecular mechanisms underlying each of the distinct myelomagenic transcriptomes and the CCND1 vs CCND2 dichotomy have not been defined. To address these questions, we obtained highly purified BMPC from 3 healthy donors and 30 MM patients (HY: 15; CCND1: 4; MMSET: 5; MAF: 2; other: 4), either at diagnosis or relapse, and mapped their chromatin accessibility and transcriptome profiles by ATAC-seq and RNA-seq, respectively. In total, we obtained ~300K regions with accessible chromatin in either MM or normal PC. Overall chromatin accessibility increased in myeloma compared to normal PC, particularly in MAF- and MMSET-translocated subtypes. Analysis of combined ATAC-seq/RNA-seq by Multi-Omics Factor Analysis (MOFA) resulted in a clearer samples distinction than either ATAC-seq or RNA-seq alone, with altered chromatin accessibility accounting for more of the variance than expression. Of the top five identified factors, the top two (one transcriptome driven, one accessibility driven) distinguished normal from MM samples, whilst two more separated MMSET, MAF and CCND1 subgroups. Ninety seven, 157, 256 and 348 overexpressed genes in the CCND1, HY, MMSET and MAF subgroups, respectively, were predicted to be regulated by differentially accessible enhancers. Twenty percent (165/858) of these genes were overexpressed in >1 subgroup suggesting a process of chromatin accessibility-based convergence evolution. Enrichment analysis suggested direct or indirect involvement of Polycomb and chromatin remodellers; significant enrichment was also found for genes involved in neurogenesis. ATAC-seq footprinting predicted binding sites for 250 expressed transcription factors (TFs), 116 of which displayed higher binding frequency in myeloma than in normal PC and included both known (e.g., XBP1, RELA, IRF4, PRDM1) and potentially novel regulators of myeloma biology (e.g., CXXC1 and NFE2L1). The remaining 134 TF were predicted to be present in at least one MM subgroup, but absent in normal PC. Amongst them, as expected, MAF was active in the MMSET- and more so in the MAF-translocated subgroups. DepMap database analysis suggested myeloma cell dependency on 181/250 TF (CRISPR/Cas9 CERES score < -0.1 in >3/14 MMCL analysed). In dissecting the regulatory basis of CCND2 vs CCND1 dichotomy, one MOFA factor completely separated MAF from CCND1 samples, placing extreme opposite weights on the expression of CCND2 and CCND1 respectively. Interestingly, the same factor identified open-chromatin clusters upstream of CCND2 and linked them to its over-expression. These clusters were also open in the MMSET group and in CCND2-expressing HY samples. Conversely, no accessibility was detected in the CCND1 group, the CCND1-expressing HY samples or in normal PCs. Further, super-enhancer calling using the H3K27ac histone mark in MAF-translocated JJN3 cells identified the region of interest as a bona fide super-enhancer. Chromatin long range interactions, as assessed by Capture-HiC, demonstrated high frequency interactions of the CCND2 promoter with the constituent elements of the putative super-enhancer. Experimental validation using a CRISPR/Cas9i system confirmed the functional role of all 4 super-enhancer constituents tested in the regulation of CCND2 expression, while TF footprinting predicted MAF binding to the super-enhancer in MAF-translocated PC. In conclusion, we show that distinct oncogenic transcriptomes in MM are underpinned by extensive chromatin changes, accompanied by TF activity 're-wiring' that does not necessarily require transcriptional deregulation of the TF themselves. We identify novel, non-oncogene TF dependencies that suggest therapeutic opportunities in MM and we discover and characterise the critical super-enhancer that drives overexpression of the CCND2 oncogene in MM. Disclosures Auner: Amgen: Other: Consultancy and Research Funding; Takeda: Consultancy; Karyopharm: Consultancy. Hatjiharissi:Janssen: Honoraria. Caputo:GSK: Research Funding. Karadimitris:GSK: Research Funding.
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- 2019
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17. Cold autoimmune hemolytic anemia secondary to atypical pneumonia
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Maria Atta, Eimear T. Brannigan, and Barbara J. Bain
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Adult ,medicine.medical_specialty ,government.form_of_government ,Immunology ,1102 Cardiovascular Medicine And Haematology ,03 medical and health sciences ,0302 clinical medicine ,Cold autoimmune hemolytic anemia ,Internal medicine ,0502 economics and business ,Pneumonia, Mycoplasma ,medicine ,Humans ,Science & Technology ,Hematology ,business.industry ,05 social sciences ,medicine.disease ,Atypical pneumonia ,030220 oncology & carcinogenesis ,government ,050211 marketing ,Female ,Anemia, Hemolytic, Autoimmune ,business ,Life Sciences & Biomedicine - Published
- 2016
18. Clustering Analysis of Myeloma Clone Phenotype Is Informative for Disease Heterogeneity and Prognosis at Relapse
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Farah O'Boyle, Mark Robinson, Marco Bua, Kikkeri N. Naresh, Anastasios Karadimitris, Eva Yebra-Fernandez, Holger W. Auner, Syeda Maheen Ahsan, Aristeidis Chaidos, Richard Syzdlo, Maria Atta, Elisabet Nadal-Melsio, and Jane F. Apperley
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Oncology ,medicine.medical_specialty ,Genetic heterogeneity ,Immunology ,Cell Biology ,Hematology ,Biology ,medicine.disease ,Biochemistry ,Minimal residual disease ,Genetic architecture ,Log-rank test ,Autologous stem-cell transplantation ,Internal medicine ,medicine ,Chromosome abnormality ,Multiple myeloma ,Exome sequencing - Abstract
Background: Multiple myeloma (MM) is a remitting-relapsing malignancy with variable clinical outcome. Certain cytogenetic abnormalities, either present at diagnosis or emerged at later stages, predict for poor outcome and highlight the clinical importance of MM genetic heterogeneity. Whole genome and exome sequencing studies reveal a complex intraclonal genetic landscape, organised in linear and branching Darwinian patterns, which evolves in space and time. Clones with a more complex genetic architecture may be more fit to escape treatment and those patients are likely to have a worse clinical outcome. Clinical multicolour flow cytometry (MFC) is routinely used in MM diagnosis and detection of minimal residual disease. Previous studies have shown that MM cell subpopulations with discrete phenotypic features correspond to genetic subclones, therefore it is plausible that MFC data captures clonal heterogeneity. On that basis, we propose that clustering analysis of MM phenotypic subpopulations could be clinically relevant. Methods: We retrospectively analysed clinical MCF data at diagnosis from 44 patients eligible for autologous stem cell transplantation (AutoSCT) and 14 ineligible patients and data from 52 relapsed patients after first AutoSCT. All patients were treated between 2012 - 2018. The 8-colour MCF marker panel included CD138, CD38, CD56, CD45, CD20, CD19, cytoplasmic kappa and lambda light chains (cytLC). Data was analysed in FlowJo software and MM plasma cells were identified as CD38high, CD19-, cytLC+, within their FSC-A/SSC-A physical gate. The gated events were exported in a new fcs file. Clustering analysis was performed in Cytofkit, a R-based Bioconductor package, using the Rphenograph, Cluster-X and FlowSOM algorithms. All fcs files were subjected in the same clustering analysis, but CD56 positive and CD56 negative cases were analysed separately to offset bias from differential CD56 expression. Parameters inserted in the algorithms were FSC-A, CD138, CD38, CD45, CD20 and CD56. The number of clusters was produced by FlowSOM (k=4) and only clusters with size >1% of the total events were accepted. Results: At diagnosis, FlowSOM identified 1 (n=32, 56.1%) or 2 clusters (n=19, 33.3%) in most cases. Three clusters were found only in 5 patients (8.8%) and 4 clusters in 1 patient (1.8%). The number of clusters at diagnosis did not correlate with cytogenetic risk group or ISS. Also, the number of clusters did not predict for depth of response or relapse free survival post AutoSCT. On the contrary, phenotypic patterns at relapse post AutoSCT were more complex, with 1 cluster identified in 2 patients only (3.8%), 2 clusters in 23 (44.2%), 3 clusters in 24 (46.2%) and 4 clusters in 3 patients (5.8%). Patients with >2 clusters (n=27) had a shorter survival post relapse (median 17 months - 95% CI, 7-26.6) compared to those (n=25) with 1-2 phenotypic clusters (median not reached, Log rank p=0.06). A phenotypic cluster characterised by CD138low/- at relapse, was also associated with adverse outcome and higher risk cytogenetics. In 14 patients with available serial samples at diagnosis and relapse we observed 3 patterns of phenotypic evolution: a. sustained pattern, b. change of dominant cluster and c. emergence of completely new subpopulations. These evolving phenotypes resemble changes in clonal composition over time observed in genetic studies. Conclusion: Clinical MCF, in addition to routine diagnostics, can be informative of MM biological and clinical heterogeneity. Particularly in the relapsed setting, complex phenotypic patterns identified by clustering analysis may be of prognostic value. Validation of this preliminary study results in larger patient cohorts or clinical trials, could provide a useful and readily available tool for patient stratification and prognosis. Disclosures Apperley: Novartis: Honoraria, Research Funding, Speakers Bureau; Pfizer: Honoraria, Speakers Bureau; BMS: Honoraria, Speakers Bureau; Incyte: Honoraria, Speakers Bureau. Karadimitris:Celgene: Research Funding; GSK: Research Funding; Gilead: Honoraria.
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- 2018
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19. Autoimmune Cytopenias Following Alemtuzumab-Induced Renal Transplant: Clinical Features and Treatment Outcomes
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Camelia Vladescu, Nichola Cooper, Andreas Kousios, Rawya Charif, Maria Atta, Simona Deplano, Elisa Lucchini, Deena Paul, Asad Luqmani, and Mark Layton
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Oncology ,medicine.medical_specialty ,Cytopenia ,Kidney ,Evans syndrome ,business.industry ,Immunology ,Cell Biology ,Hematology ,medicine.disease_cause ,medicine.disease ,Biochemistry ,Organ transplantation ,Autoimmunity ,medicine.anatomical_structure ,hemic and lymphatic diseases ,Internal medicine ,medicine ,Alemtuzumab ,Rituximab ,Autoimmune hemolytic anemia ,business ,medicine.drug - Abstract
Background: The anti-CD52 monoclonal antibody alemtuzumab (Alem) induces a rapid-onset, profound and long-lasting depletion of lymphocytes: B cells recover within 12 months, while T cell recovery is still incomplete after 30 months. Alem is used as induction therapy for solid organ transplantations, including renal. Autoimmune complications following Alem include thyroid disorders (20-30%), immune thrombocytopenia (ITP) (2-3%), and autoimmune hemolytic anemia (AIHA) and autoimmune nephropathies (< 1%). Methods: we retrospectively analyzed 41 patients (pts) attending the Haematology Clinic at Hammersmith Hospital (HH), who developed autoimmune cytopenias (ITP or AIHA) after an Alem-induced renal transplant. The autoimmune cytopenia was defined as a rapid onset of isolated thrombocytopenia and/or anemia without other explanation. For ITP, complete response (CR) and response (R) were defined according to IWG standard criteria (Rodeghiero,Blood,2009). For AIHA, CR was defined as a stable Hb level >120 g/L, no transfusion requirement and no signs of hemolysis; partial response (PR) as a rise in Hb levels >20 g/L, without transfusion requirement. The study aim is to report clinical features and treatment outcomes of these 41 pts. Results: Between 1/11/05 and 14/12/16, 1431 pts received an Alem-induced renal transplant at HH. 34 (2.3%) developed ITP and 7 (0.48%) AIHA; 28 (68%) pts were males. Median age at renal transplant was 48 (range 20-69) years. The cytopenia developed a median of 35 months (range 6-161) after Alem administration. Median lowest platelet count was 5.5x109/L (range 0-41) and median nadir of hemoglobin (Hb) was 58 g/L (range 35-65). ITP pts: 2 pts achieved spontaneous CR. Of the remaining 32, 91% received steroids, IVIG or both as first line therapy, with an overall response rate (ORR) of 62%. 10 pts (31%) maintained the response without any further treatment. 22 pts required second line therapy, 11 required ≥ 3 lines of treatment. Treatments included: thrombopoietin receptor agonists (TPO-RA), rituximab (RTX), MMF and/or a combination. TPO-RA were used 15 times, with an ORR of 80%, a relapse rate of 33% and a median duration of response (DOR) of 22 months (range 3-48); 10/12 pts (83%) who responded to TPO-RA, discontinued treatment after a median of 64 days (range 7 - 528): 6 maintained the response after discontinuation. RTX was used 10 times, with an ORR of 90%, a relapse rate of 22% and a median DOR of 27 months (range 3 - 83). A combination of RTX and TPO-RA was used 7 times, with an ORR of 71%, a relapse rate of 40% and a median duration of response (DOR) of 5 months (range 2-44); the 5 responders discontinued treatment after a median of 49 days (range 14-462): 3/5 maintained their response. After a median follow-up of 38 months (range 3-96), all ITP pts maintained a response (91% CR and 9% R); 4 were still on treatment (2 TPO-RA and 2 MMF). AIHA pts: 6 of 7 (86%) pts with AIHA received first line steroids +/- IVIG with an ORR of 67%. 4 pts needed second line therapy: all received RTX with an ORR of 50%. 2 pts needed ≥ 3 lines of therapy. After a median follow-up of 68 months (range 27-102) all AIHA pts maintained a response (57% CR and 43% PR), without any ongoing treatment. Adverse events: 33 pts (80%) experienced 1 or more adverse events (AEs): 25 cardiovascular (including 14 thrombosis), 21 infections (16 grade ≥3), 5 steroid-induced diabetes, 3 graft failures, 10 malignancies (6 solid tumors and 4 PTLD). 6 of the ITP pts also developed AIHA (Evans syndrome). 3 ITP pts died. Conclusions: ITP and AIHA represent important complications of Alem-induced renal transplant. Response rates after first-line therapy for ITP were comparable to primary ITP (30%). However, long-term response rate, sustained response to RTX and the proportion of pts able to continue in remission after discontinuing TPO-RA are higher than seen with primary ITP. Recovery from cytopenias may occur in conjunction with T cell reconstitution post Alem (this is under investigation). The large majority of AEs were related to multifactorial heavy immunosuppression and increased thrombotic risk distinguishing this group of pts. Hence for ITP and AIHA, steroids should be limited, as they are curative in only a few pts and burdened by many side effects. Both RTX and a short course of TPO-RA appear valid options, but the choice should be driven by the individual balance between thrombotic and infectious risks versus persistence of cytopenias. Disclosures Cooper: Amgen, Novartis: Consultancy, Honoraria, Membership on an entity's Board of Directors or advisory committees.
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- 2018
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20. Impact of dabigatran on platelet function and fibrinolysis
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Chrissoula Liantinioti, Argirios E. Tsantes, Georgios Tsivgoulis, Athina Simitsi, Maria Chondrogianni, Aristeidis H. Katsanos, Christina Zompola, Maria Atta, Ignatios Ikonomidis, Stefanos Bonovas, Violetta Kapsimali, Elias Kyriakou, and Petros Kopterides
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Blood Platelets ,Male ,medicine.medical_specialty ,medicine.medical_treatment ,Pilot Projects ,Antithrombins ,Dabigatran ,Interquartile range ,Internal medicine ,Fibrinolysis ,Atrial Fibrillation ,medicine ,Coagulation testing ,Humans ,Stroke ,Blood Coagulation ,Aged ,business.industry ,Middle Aged ,medicine.disease ,Thrombelastography ,Thromboelastometry ,Neurology ,Direct thrombin inhibitor ,Anesthesia ,Cardiology ,Female ,Neurology (clinical) ,business ,medicine.drug ,Discovery and development of direct thrombin inhibitors - Abstract
We sought to evaluate the potential enhanced fibrinolytic and antiplatelet activity of dabigatran etexilate (DE) due to decreased thrombin levels in patients with stroke or transient ischemic attack and non-valvular atrial fibrillation (NVAF).Consecutive patients with cerebrovascular diseases and NVAF that were treated with DE in a tertiary university hospital. Fibrinolysis and platelet function were assessed by thromboelastometry (ROTEM) and platelet function analyzer (PFA)-100, respectively, before and after treatment with DE. Conventional coagulation tests, endogenous thrombin potential (ETP) and hemoclot thrombin inhibitors (HTI), were also performed in order to detect any possible correlation between dabigatran plasma levels, its anticoagulant activity and the intensity of platelet dysfunction or fibrinolysis.A total of nineteen patients fulfilled our inclusion criteria (mean age 62.3±7.2years; 47% males; median CHADS2-score: 3; interquartile range: 2-4). DE treatment was associated with a significant reduction of the lysis index (LI60) at 60min (p=0.036), and prolongation of the PFA-100 CEPI closure time (p=0.024). After dabigatran treatment, abnormal PFA-100 results were obtained in two patients (11%, 95% CI: 2%-33%). DE levels (determined by HTI) were strongly inversely correlated (rho=-0.85; p0.001) with the area under the curve (AUC) values in ETP assay. Νo association was found between HTI and PFA-100 CEPI CT (p=0.64), or LI60 measurements (p=0.60).Our findings indicate that DE might affect platelet function and fibrinolysis and highlight the potential role of ETP as an alternative option in DE monitoring. The intensity and clinical relevance of DE antiplatelet and fibrinolytic effects require further investigation.
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- 2015
21. Active travel and sustainable transport
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Maria Attard
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Transportation engineering ,TA1001-1280 - Published
- 2022
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22. Procoagulant activities of plasma factor VIIc and factor Xc are positively and independently associated with concentrations of the high-density lipoprotein apolipoprotein, apo A-II
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Ian F. Godsland, David Crook, Maria Atta, Desmond G. Johnston, and Faria Shafique
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Adult ,Male ,medicine.medical_specialty ,Apolipoprotein B ,Lipoproteins ,Fibrinogen ,Models, Biological ,Cohort Studies ,chemistry.chemical_compound ,High-density lipoprotein ,Internal medicine ,Blood plasma ,medicine ,Humans ,Aged ,Factor VII ,biology ,Cholesterol ,Coagulants ,Factor X ,Hematology ,Middle Aged ,Atherosclerosis ,Lipids ,Endocrinology ,chemistry ,biology.protein ,lipids (amino acids, peptides, and proteins) ,Apolipoprotein A-II ,medicine.drug ,Lipoprotein - Abstract
SummaryThe pro- and antiatherogenic roles of apolipoproteins B andA-I, respectively, are well-established although the importance of apolipoprotein A-II remains unclear. There is extensive evidence for the involvement of plasma lipoproteins in haemostatic function. However, in-vivo studies of relationships between haemostatic variables and apolipoprotein concentrations are very limited. Plasma fibrinogen, factors VIIc and Xc (FVIIc and FXc, respectively), apolipoproteins (apo) A-I, A-II and B, triglycerides, total, low-density and high-density lipoprotein (HDL) cholesterol, and cholesterol in HDL subfractions 2 and 3 were measured in 186 apparently healthy Caucasian men (aged 26–78 years; body mass index 19.9–37.8 kg/m2).Associations between haemostatic, apolipoprotein,lipid and lipoprotein variables were explored in uni- and multivariable analyses. Fibrinogen did not correlate with any of the lipid-related variables. FVIIc and FXc were significant positive univariate correlates of total cholesterol (correlation coefficients 0.26,p
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- 2008
23. Quantitative and Qualitative Analysis of Regulatory T Cells (Tregs) in B Cell Chronic Lymphocytic Leukemia (B-CLL)
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Christos K. Kontos, Aris Spathis, Efi Bazani, Nikos Papanikolaou, S. Papageorgiou, Christina Economopoulou, Anthi Bouchla, Diamantina Vasilatou, Myrofora Vikentiou, Vassiliki E. Mpakou, Frieda Kontsioti, Christoforos Roubakis, Eugenia Konsta, Maria Atta, Georgia Stavroulaki, George Dimitriadis, Vassiliki Pappa, Stela Kokkori, Dikea-Eleni Ioannidou, Elias Kyriakou, and Kostas Gontopoulos
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CD40 ,biology ,Immunology ,FOXP3 ,hemic and immune systems ,chemical and pharmacologic phenomena ,Cell Biology ,Hematology ,Biochemistry ,CD19 ,Interleukin 21 ,immune system diseases ,hemic and lymphatic diseases ,biology.protein ,Interleukin 12 ,Cancer research ,IL-2 receptor ,CD5 ,Clone (B-cell biology) - Abstract
Introduction: T regulatory cells are immunosuppressive cells considered to play an important role in cancer biology and autoimmunity by suppressing host immune response and autoreactive lymphocytes respectively. Several studies reveal that Treg cells act by suppressing anti-tumor immune response, through the targeting of other immune cells, such as T cells, B cells and dendritic cells. Accumulated data indicate a significant role of T cell dysfunction in the pathogenesis of CLL. Aims: The scope of this study is the analysis of numerical and functional abnormalities of Tregs in B-CLL with the view to elucidate their role in the pathogenesis of the disease. Methods: Treg cells derived from 44 untreated B-CLL patients with a median age 62 and 17 healthy donors were analyzed by Flow cytometry, using the following antibodies: CD45Ro-FITC/CD45RA-PE/CD4-ECD/CD25-PC5/CD127-PC7, CD1a-FITC/CD137-PE/CD4-ECD/CD25-PC5/CD127-PC7, CD95-FITC/cyCD152-PE/CD4-ECD/CD25-PC5/CD127-PC7, beads/FoxP3-PE/CD4-ECD/CD25-PC5/CD127-PC7, Annexin V-FITC/CD4-ECD/CD25-PC5/CD127-PC7. For the functional analysis, peripheral blood was obtained from 20 patients with B-CLL. Mononuclear cells were isolated using Ficoll-Paque gradient centrifugation. CD4+ CD25+ (Treg cells), CD4+ CD25- (T effectοr cells, Teff), CD5+ CD19+ (B-CLL) and CD5- CD19+ (Normal B, NB) cells were separated using magnetic antibody cell sorting. To test the functionality of the assayed Tregs, the isolated cell populations were cultured in a 96-well plate (Tregs, Teff, B-CLL cells, NB cells, B-CLL cells: Tregs in 1:20 ratio, B-CLL cells: Teff in 1:20 ratio, NB cells: Tregs in 1:20 ratio, NB cells: Teff in 1:20 ratio) and their proliferative capacity was measured using the BrdU assay. To further analyze the functional role of Tregs, peripheral blood was obtained from 22 patients with CLL and 22 healthy donors. Mononuclear cells were isolated using Ficoll-Paque gradient centrifugation. CD4+ CD25+ CD127dim/- (Treg cells), CD5+ CD19+ (B-CLL) and CD5- CD19+ (Normal B, NB) cells were separated using magnetic antibody cell sorting and were co-cultured in a 96-well plate in a 1:10 ratio. The apoptosis of B cells was determined by the Annexin V/PI method. Results: FACS analysis of the Treg cells resulted at the following observations: The Treg absolute cell number (cells/μL), estimated either as the number of CD4+ CD25+ CD127- cells or as the number of CD4+ CD25+ FoxP3+ cells, was statistically significantly higher in patients' samples than in controls (CD127- 21.65 vs 7.35, p=0.001; FoxP3+ 20.42 vs 6.5, p= 0.001). Annexin V expression in Treg cells from BCLL patients was significantly lower compared to controls (3.626 vs 38.615, p=0.003). The functional analysis of Treg cells through BrdU assay indicated that CLL Tregs were able to suppress the proliferation of Teff cells (p=0.002) and that Teff cells were in turn able to significantly suppress the proliferation of B-CLL cells (p=0.05). Moreover, FACS analysis through Annexin V/PI method indicated that Treg CLL cells significantly decrease the apoptosis rate of NB cells after their co-culturing, compared to NB cells (p Conclusions: In CLL patients, Treg cells are significantly higher and present with lower apoptotic levels compared to healthy donors. The functional analysis indicates that T effector cells suppress the proliferation of B-CLL cells and T effector cells are suppressed by Tregs indicating that the increased number of Tregs observed in CLL contributes indirectly to the proliferation of the CLL clone. These data are further supported by our observations that CLL derived Treg cells appear rather incapable of inducing apoptosis of both NB cells and B-CLL cells, in contrast to normal Tregs, suggesting an immunoediting effect of B-CLL cells on Tregs which negatively affects the functionality of the latter. Therefore, Treg cells in CLL do not efficiently eliminate the abnormal clone and play an important role in the pathogenesis of the disease. The molecular underlying mechanisms need to be further elucidated. Disclosures No relevant conflicts of interest to declare.
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- 2015
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24. Serum Cytokine Profile in Patients with Septic Shock/Severe Sepsis and Thrombocytopenia
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Christina Economopoulou, Maria I. Stamouli, Panagiotis Tsirigotis, Konstantinos Gkirkas, I Dimopoulou, Spiros Chondropoulos, Diamantina Vasilatou, Nikolaos Papanikolaou, Maria Atta, Dikea-Eleni Ioannidou, Sotirios G. Papageorgiou, Ioannis Papassotiriou, Vassiliki Pappa, and Anastasia Bartzeliotou
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Disseminated intravascular coagulation ,medicine.medical_specialty ,Septic shock ,business.industry ,medicine.medical_treatment ,Immunology ,Cell Biology ,Hematology ,medicine.disease ,Biochemistry ,Intensive care unit ,Gastroenterology ,law.invention ,Sepsis ,Cytokine ,SuPAR ,law ,Internal medicine ,medicine ,SOFA score ,Multiple organ dysfunction syndrome ,business - Abstract
Introduction Sepsis is the result of an uncontrolled inflammatory response to various stimuli such as bacterial infections. Sepsis can be complicated by hemodynamic instability, multi-organ dysfunction and hematological abnormalities. Patients with severe sepsis usually develop thrombocytopenia due to various reasons, and the presence of thrombocytopenia is considered as a negative prognostic marker. The aim of the present study was to determine the cytokine profile in serum of patients with severe sepsis and thrombocytopenia. Patients and Methods Serum cytokine profile was analyzed in a cohort of 112 consecutive patients with severe sepsis and/or septic shock treated in the intensive care unit (ICU) of our institute from October/2009 to September/2012. Patients were divided in two groups (A and B). Group A consisted of 43 patients with severe sepsis and thrombocytopenia (platelet count below 70X103/ìl), while group B consisted of 69 patients without thrombocytopenia. Patients with thrombocytopenia due to disseminated intravascular coagulation (DIC), suspected drug etiology, or due to any obvious etiology such as hematologic malignancy were excluded from our analysis. A cohort of 10 healthy volunteers served as control group. Serum levels of IFNã, IL-8, ICAM, VCAM, and SUPAR (soluble urokinase plasminogen activation receptor) were estimated by using Luminex xMAP technology. Statistical analyses were performed using NCSS software. The following variables were entered in a multiple logistic regression model: 1) age and sex, 2) active malignancy vs. not, 3) septic shock vs. severe sepsis, 4) APACHEII score, 5) SOFA score, 6) serum IFNã, ICAM, VCAM, IL-8, and SUPAR levels, and 7) platelet number. All parameters were estimated on day of admission. Results Hospital Mortality: Overall 65 out of 112 patients died during their hospital stay. The overall hospital mortality was 58%. In multivariate analysis non-survivors had higher APACHE score (p=0.01) and had lower platelet counts (p Plasma cytokine levels in patients with and without thrombocytopenia: Patients in group A had a different cytokine profile as compared with patients in group B. Serum levels of VCAM and IFNã were not different between group A and B. However, patients with sepsis and thrombocytopenia had statistically significantly higher serum levels of ICAM, IL-8 and SUPAR (p Predictive value of serum cytokine for thrombocytopenia: Serum levels of ICAM, IL-8, and SUPAR were good predictors of the presence of thrombocytopenia in patients with sepsis. The ROC curves of ICAM, IL-8, and SUPAR serum levels in predicting thrombocytopenia in patients with sepsis are shown in Figure 1. The AUCs were 0.785 (95% CI, 0.696 – 0.857, p Conclusion Thrombocytopenia is not an uncommon finding in patients with severe sepsis. Although DIC or drug reactions are well known causes of low PLT counts, the pathogenesis of thrombocytopenia in patients with sepsis remains poorly understood. High levels of ICAM, IL-8 and SUPAR are usually associated with severe endothelial dysfunction. In our study, we showed that patients with thrombocytopenia have a specific serum cytokine profile expression consistent with the presence of endothelial damage. Figure 1 Figure 1. Disclosures No relevant conflicts of interest to declare.
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- 2014
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25. Bortezomib and Methotrexate Interfere with the DNA Repair Signaling Transduction Pathways and Induce Apoptosis in Cutaneous T-Cell Lymphoma
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S. Papageorgiou, Christina Antoniou, Dikea-Eleni Ioannidou, Frieda Kontsioti, Diamantina Vasilatou, Nikos Papanikolaou, Evangelia Papadavid, Panagiotis Tsirigotis, George Dimitriadis, Christoforos Roubakis, Eleni Bazani, Vassiliki E. Mpakou, Christina Economopoulou, Vikentiou Murofora, Vassiliki Pappa, Evi Konsta, Maria Atta, and Dimitris Rigopoulos
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Bortezomib ,DNA repair ,Immunology ,Cutaneous T-cell lymphoma ,Cell Biology ,Hematology ,DNA repair protein XRCC4 ,Biology ,medicine.disease ,Biochemistry ,MSH2 ,Cancer cell ,Cancer research ,medicine ,Proteasome inhibitor ,medicine.drug ,Nucleotide excision repair - Abstract
Introduction: Cutaneous T-cell lymphomas (CTCL) represent a heterogeneous group of extranodal non-Hodgkin lymphomas, derived from skin-homing mature T-cells. Mycosis fungoides (MF) and Sézary syndrome (SS) are the commonest types and together comprise 54% of all CTCL. MF evolves from patches to infiltrated plaques and eventually tumors. SS is a lymphoma-leukemia syndrome characterized by erythroderma and the presence of a malignant T-cell clone in the peripheral blood and the skin. At present, no curative treatment for CTCL is available. Therefore current CTCL research efforts are focused on elucidating the molecular mechanisms of the disease’s pathogenesis and on identifying new pharmacological targets. Several drugs have shown potentially significant activity either alone or in combination with conventional agents. Their effectiveness and their mechanisms of action comprise a current research challenge for the improvement of CTCL therapy. The aim of this study was to investigate the possible alterations in the gene expression profile (focusing on DNA Damage Signaling and DNA Repair pathways) and cell death in CTCL cell lines after treatment with two chemotherapeutic agents, Bortezomib and Methotrexate. Methods: Three CTCL cell lines were used. MyLa, (MF), SeAx and Hut-78 (both SS). Cells were cultured in RPMI 1640 and were treated with either Bortezomib (10nmol/L) or Methotrexate (10μM) for 24h. Apoptosis was determined by flow cytometry using the Annexin V/PI method. Gene expression profiling following PCR arrays analysis was performed after total RNA extraction and purification from untreated and drug-treated cells. All RNA samples’ amplification, labeling and hybridization to RT2 Profiler PCR Arrays (DNA Damage Signaling and DNA Repair PCR array) (QIAGEN) were performed according to the manufacturer’s instructions. All data were analyzed using the appropriate RT2 Profiler PCR Array data analysis tool. Results: Hut-78, Seax and Myla cells responded with statistically significant enhanced apoptosis when treated for 24h with bortezomib, compared to untreated cells, while Methotrexate led to a rather moderate increase of apoptosis in Hut-78 and Seax cells and did not affect the apoptosis of Myla cells. Microarrays analysis after bortezomib treatment revealed a great effect in the expression profile of genes involved in almost all DNA repair pathways tested, in all three cell lines, with Hut-78 being affected the most. Specifically, in all cell lines, there was a significant down-regulation of a large number of genes involved in the Double Strand Breaks DNA Repair mechanism, (i.e. BRCA1, BRCA2, RAD50, RAD51, RAD51C, XRCC2, XRCC3, XRCC4, XRCC5 and XRCC6) as well as of genes involved in the Mismatch Repair pathway (i.e. MLH1, MLH3, MSH2, MSH5, MSH6) and the Nucleotide Excision Repair mechanism (i.e. DDB2, LIG1 and RAD23A), compared to untreated cells. On the contrary, bortezomib had a small effect on Base Excision repair mechanism, mostly downregulating the expression of XRCC1 gene in Hut-78 and Myla cells. Methotrexate treatment also led to a significant down-regulation of genes involved in the DSB (RAD50, XRCC4, XRCC6), MMR (MSH4) and NER (CDK7, RAD23A) repair mechanisms in Hut-78 cells but had a rather much more moderate effect on the expression profile of Seax and Myla cells, where fewer genes were affected. Conclusions: Our data clearly demonstrate a differential effect of bortezomib and methotrexate in terms of apoptosis induction on CTCL cells with bortezomib inducing apoptosis of both MF and SS derived cell lines and methotrexate being rather inactive on SS derived cells. We showed that both drugs, but mostly bortezomib significantly down-regulate a large number of genes involved in the DSB, MMR and NER mechanisms, suggesting a possible mechanism, among probably others, for the enhanced sensitivity to apoptosis of SS and MF cell lines after treatment. Bortezomib’s significant effect could be easily understood, since it is a well known proteasome inhibitor and has been previously related to inhibition of NF-kB and accumulation of pro-apoptotic proteins, while it has also been reported that cancer cells are more sensitive to proteasome inhibition than normal cells. Although these results need to be further confirmed, they appear very encouraging for understanding the mechanisms of action of these drugs in CTCL with the view to ameliorate their use in clinical practice. Disclosures No relevant conflicts of interest to declare.
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- 2014
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26. Quantitative and Qualitative Analysis Of Regulatory T Cells (Tregs) Derived From The Peripheral Blood Of Chronic Lymphocytic Leukemia Patients
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Christos K. Kontos, Frieda Kontsioti, S. Papageorgiou, Christoforos Roubakis, Maria Atta, George Dimitriadis, Eleni Dikaia Ioannidou, Vassiliki Pappa, Anthi Bouhla, Myrofora Vikentiou, Vassiliki E. Mpakou, Eugenia Konsta, and Nikos Papanikolaou
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CD40 ,biology ,Immunology ,FOXP3 ,hemic and immune systems ,chemical and pharmacologic phenomena ,Cell Biology ,Hematology ,Biochemistry ,CD19 ,Interleukin 21 ,hemic and lymphatic diseases ,biology.protein ,Interleukin 12 ,Cancer research ,IL-2 receptor ,CD5 ,Interleukin-7 receptor - Abstract
Introduction T regulatory cells are immunosuppressive cells, which are considered to play an important role in the regulation of immune response to cancer, by restraining autoreactive lymphocytes. Several studies, mostly in solid tumors, revealed that the number of Treg cells increases as the disease progresses and that Treg cells act by suppressing anti-tumor immune response, through the targeting of other immune cells, such as T cells, B cells and dendritic cells. Chronic lymphocytic leukemia (CLL) is a lymphoid malignancy, characterized by both, immunodeficiency and autoimmune disorders. Accumulated data indicate the role of T cells in the pathogenesis and development of CLL and reveal an increased number of Treg cells in CLL patients. The scope of this study is the analysis of the functional role of Tregs derived from the peripheral blood of CLL patients, mainly on B-CLL cells, and its correlation with well known prognostic factors. Methods Treg cells derived from mononuclear cells of 28 untreated B-cell CLL patients with a median age 62 (44-88) and 17 healthy donors were analyzed through Flow cytometry. Patients were classified according to Rai classification as Rai I:19, Rai II:4, Rai III:5 and according to Binet as Binet A: 24, Binet B:3 and Binet C:1. The following antibodies were used for the fluorescence-activated cell sorter (FACS) analysis: 1. CD45Ro-FITC/CD45RA-PE/CD4-ECD/CD25-PC5/CD127-PC7 2. CD1a-FITC/CD137-PE/CD4-ECD/CD25-PC5/CD127-PC7 3. CD95-FITC/cyCD152-PE/CD4-ECD/CD25-PC5/CD127-PC7 4. beads/FoxP3-PE/CD4-ECD/CD25-PC5/CD127-PC7 5. Annexin V-FITC/CD4-ECD/CD25-PC5/CD127-PC7 Moreover, peripheral blood was obtained from 15 patients with B-cell CLL. Mononuclear cells were isolated using Ficoll-Paque gradient centrifugation. CD4+CD25+ (Treg cells), CD4+CD25- (T effectοr cells, Teff), CD5+CD19+ (B-CLL) and CD5+CD19- (Normal B, NB) cells were separated using magnetic antibody cell sorting. To test the functionality of the assayed Tregs, the isolated cell populations were cultured in a 96-well plate (Tregs, Teff, B-CLL, NB cells, Tregs:Teff in a 4:1 ratio, B-cll:Tregs in 1:20 ratio, B-cll:Teff in 1:20 ratio, NB cells:Tregs in 1:20 ratio, NB cells:Teff in 1:20 ratio) and their proliferative capacity was measured using the BrdU assay. Results FACS analysis of the Treg cells resulted at the following observations: (1) The co-expression of the CD45RA-CD45RO markers was significantly higher in patients’ samples than in controls (p=0.047). (2) No significant differences were observed between patients and controls, regarding the expression of the CD1α marker, as well as the expression of CD95 and CD152 markers. (3) The Treg absolute cell number (cells/μL), estimated either as the number of CD4+ CD25+ CD127- cells or as the number of CD4+ CD25+ FoxP3+ cells, was statistically significantly higher in patients’ samples than in controls (CD127- p=0.047, FoxP3+ p= 0.036). (4) Annexin V expression in Treg cells from B- CLL patients was significantly lower compared to controls (p=0.027). Following the purification and culturing of T and B cells from B-cell CLL patients’ samples, functional analysis of the different cell populations was performed using the BrdU proliferation assay. We observed that Tregs were able to significantly suppress the proliferation of the Teff cells (p=0.002). After the co-culturing of NB cells (CD5+CD19-)and Tregs (CD4+CD25+) we found that NB cells seemed to significantly increase the proliferation of Treg cells, compared to the proliferation capacity of the Tregs when cultured alone (p=0.047). Moreover, we observed that Teff (CD4+CD25-) were able to significantly suppress the proliferation of B-CLL cells (CD5+CD19+), when co-cultured (B-CLL: Teff, 1:20 ratio) (p=0.05). Conclusions In B-cell CLL patients, Treg cells are significantly higher and present with lower apoptotic levels compared to healthy donors’ samples. The functional analysis of Treg cells indicates that they can effectively suppress the proliferation of T effector cells. Moreover, T effector cells seem to suppress the proliferation of B-CLL cells, while NB cells increase the proliferation of Treg cells. These observations could probably indicate that at the early stages of the disease, where NB cells are more aberrant, Treg cells’ activity is induced, leading to Teff cells’ suppression and therefore, to an indirect induction of B-CLL cells’ proliferation. Disclosures: No relevant conflicts of interest to declare.
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- 2013
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27. Topical collection on the role of planning towards sustainable urban mobility
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Hana Brůhová Foltýnová, Maria Attard, and Sandra Melo
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Transportation engineering ,TA1001-1280 ,Transportation and communications ,HE1-9990 - Published
- 2018
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28. The Potential of Volunteered Geographic Information (VGI) in Future Transport Systems
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Maria Attard, Muki Haklay, and Cristina Capineri
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government ,sustainable mobility ,transport ,VGI ,City planning ,HT165.5-169.9 - Abstract
As transport systems are pushed to the limits in many cities, governments have tried to resolve problems of traffic and congestion by increasing capacity. Miller (2013) contends the need to identify new capabilities (instead of capacity) of the transport infrastructure in order to increase efficiency without extending the physical infrastructure. Kenyon and Lyons (2003) identified integrated traveller information as a facilitator for better transport decisions. Today, with further developments in the use of geographic information systems (GIS) and a greater disposition by the public to provide volunteered geographic information (VGI), the potential of information is not only integrated across modes but also user-generated, real-time and available on smartphones anywhere. This geographic information plays today an important role in sectors such as politics, businesses and entertainment, and presumably this would extend to transport in revealing people’s preferences for mobility and therefore be useful for decision-making. The widespread availability of networks and smartphones offer new opportunities supported by apps and crowdsourcing through social media such as the successful traffic and navigation app Waze, car sharing programmes such as Zipcar, and ride sharing systems such as Uber. This study aims to develop insights into the potential of governments to use voluntary (crowdsourced) geographic information effectively to achieve sustainable mobility. A review of the literature and existing technology informs this article. Further research into this area is identified and presented at the end of the paper.
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- 2016
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29. Tujec šteje: prostorsko-časovna analiza okupatorjev, priseljencev in izseljencev na Malti
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John A. Schembri and Maria Attard
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priseljevanje ,sredozemska regija ,Malta ,nezakonito priseljevanje ,severna Afrika ,History of scholarship and learning. The humanities ,AZ20-999 ,Literature (General) ,PN1-6790 - Abstract
Priseljevanje v Sredozemlje ima večtisočletno zgodovino, ki se na malteškem otočju odraža skozi zaporedje okupatorjev, ki so ga kolonizirali. Vendar pa so trendi v zadnjih desetletjih pokazali izrazite spremembe v starih vzorcih, tako da namesto povratnih migrantov in naseljevanja britanskih izseljencev sedaj prevladujejo selitveni tokovi iz Evrope in podsaharske Afrike, zlasti po vključitvi Malte v Evropsko unijo leta 2004. Članek preučuje količine vključenih v te tokove, spreminjajočo se prostorsko razmestitev izhodiščnih držav ter spreminjajoče se starostne strukture priseljencev v zadnjih dveh desetletjih. Da bi zagotovili zanesljivost podatkov, so bili uporabljeni podatki zaporednih popisov prebivalstva in stanovanj, ki jih je zbral Državni statistični urad Malte. Glavni ugotovitvi prispevka sta spreminjajoča se starostna struktura priseljencev ter njihove regionalne porazdelitve na Malti. Ker je Malta najmanjša država v EU in ima eno najvišjih gostot prebivalstva na svetu, je bila obravnavana tudi problematika gostote priseljencev. Pokaže se, da je gostota priseljenega prebivalstva na Malti tako visoka kot gostote vsega prebivalstva v nekaterih evropskih državah.
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- 2013
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30. Thematic networks as toolboxes: The case of the HERODOT Network for Geography in Europe
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Maria Attard
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geography ,toolbox ,GEOCUBE ,promotion ,higher education ,Geography (General) ,G1-922 - Abstract
In some countries, Geography is struggling to survive as a subject as other disciplines develop and absorb geographical thoughts and methods into them. The survival of Geography in schools and higher education institutions is critical to the understanding of world phenomena, particularly in view of the problems with climate change, global warming and globalisation among others. There is very little understanding of the importance and role of geography in modern societies. This paper looks at the role of the HERODOT thematic network as a toolbox for the promotion of geography. By analysing the current state of geography promotion across higher education institutions, the Network aims to provide a toolbox of materials to support teachers and academics, but also parents, students and the general public to understand the role of geography in society. This is achieved through a number of initiatives, particularly the development of the GEOCUBE. This paper concludes by arguing the importance of such Networks in providing tools for the promotion and awareness of geography.
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- 2010
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31. Struttura-azione di poesia e narratività nella scrittura di Vincenzo Consolo
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Maria Attanasio
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viaggio ,storia ,parola ,coro ,metafora ,poesia ,Language. Linguistic theory. Comparative grammar ,P101-410 ,French literature - Italian literature - Spanish literature - Portuguese literature ,PQ1-3999 - Abstract
Alla ricerca di un’espressività nuova rispetto all’omologazione linguistica della contemporaneità, la scrittura di Vincenzo Consolo assume le modalità ritmiche e la densità metaforica della poesia: una vera e propria struttura-azione testuale che fa interferire la lingua della memoria e la memoria della lingua, la sequenzialità del tempo narrativo e la verticalità di quello della poesia.
- Published
- 2005
- Full Text
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