45 results on '"Marassi V."'
Search Results
2. Asymmetrical flow field-flow fractionation with online multidetection is aviable tool to investigate colored red wine colloids
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Marangon, M., Marassi, V., Roda, B., Zattoni, A., Reschiglian, P., Mattivi, F., Moio, L., Parpinello, G. P., Piombino, P., Rio Segade, S., Rolle, L., Slaghenaufi, D., Versari, A., Vrhovsek, U., Ugliano, M., and Curioni, A.
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colloids ,phenolics ,red wine, colloids, proteins, polysaccharides, phenolics ,polysaccharides ,red wine ,proteins - Published
- 2022
3. Hollow-fiber flow field-flow fractionation with multi-angle laser scattering detection for aggregation studies of therapeutic proteins
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Reschiglian, P., Roda, B., Zattoni, A., Tanase, M., Marassi, V., and Serani, S.
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- 2014
- Full Text
- View/download PDF
4. CHARACTERIZATION, SIZE DISTRIBUTION AND TIME-EVOLUTION ANALYSIS OF ENDOGENOUS NANOPARTICLES IN ITALIAN RED WINES
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Marassi, V., Roda, B., Zattoni, A., Marangon, Matteo, Curioni, Andrea, and Reschiglian, P.
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- 2019
5. A single cystein-enriched phaseolin expressed in transplastomic tobacco plants accumulates as a biopolymer
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Alice, Capecchi, De Marchis, F., Bellucci, M., Fallarino, F., Zattoni, A., Marassi, V., Roda, B., and Pompa, A.
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chloroplasts ,chloroplasts, disulfide bonds, biodegradable films ,biodegradable films ,food and beverages ,disulfide bonds - Abstract
Recently, transformation of chloroplast genome has been used for the production of heterologous proteins. We transformed tobacco chloroplasts with two different versions of the storage protein of Phaseolus vulgaris, phaseolin (with or without signal peptide), in which a cysteine residue has been added to its C-terminal region. This modification allows for the formation of inter-chain disulfide bonds, as previously demonstrated in our lab. Our purpose here is to demonstrate the different ability of chloroplast compartments (stroma and thylakoids) in the formation of phaseolin polypeptides held together by disulfide bonds. We observed that the presence of the signal peptide directs phaseolin into the thylakoid compartment, where the protein is able to form disulfide bridges and high molecular weight polymers, which represent about 0.05 % of the total soluble proteins. The formation of phaseolin polymers, not detected in P. vulgaris, could be very interesting for industrial purposes. The chloroplast could be utilized as a platform for the production of a biopolymer that derives from an edible protein. A possible application is the production of biodegradable films.
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- 2018
6. Hollow-fiber flow field-flow fractionation with multi-angle laser scattering detection for aggregation studies of therapeutic proteins
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Reschiglian, P., primary, Roda, B., additional, Zattoni, A., additional, Tanase, M., additional, Marassi, V., additional, and Serani, S., additional
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- 2013
- Full Text
- View/download PDF
7. FFF-based high-throughput sequence shortlisting to support the development of aptamer-based analytical strategies
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Valentina Marassi, Monica Mattarozzi, Lorenzo Toma, Stefano Giordani, Luca Ronda, Barbara Roda, Andrea Zattoni, Pierluigi Reschiglian, Maria Careri, Marassi V., Mattarozzi M., Toma L., Giordani S., Ronda L., Roda B., Zattoni A., Reschiglian P., and Careri M.
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Aptamer ,SELEX Aptamer Technique ,Lysozyme ,Aptamer selectivity ,Aptamers, Nucleotide ,Ligands ,Field-flow fractionation ,Screening method ,Biochemistry ,Aptamers ,Protein Binding ,Analytical Chemistry - Abstract
Aptamers are biomimetic receptors that are increasingly exploited for the development of optical and electrochemical aptasensors. They are selected in vitro by the SELEX (Systematic Evolution of Ligands by Exponential Enrichment) procedure, but although they are promising recognition elements, for their reliable applicability for analytical purposes, one cannot ignore sample components that cause matrix effects. This particularly applies when different SELEX-selected aptamers and related truncated sequences are available for a certain target, and the choice of the aptamer should be driven by the specific downstream application. In this context, the present work aimed at investigating the potentialities of asymmetrical flow field-flow fractionation (AF4) with UV detection for the development of a screening method of a large number of anti-lysozyme aptamers towards lysozyme, including randomized sequences and an interfering agent (serum albumin). The possibility to work in native conditions and selectively monitor the evolution of untagged aptamer signal as a result of aptamer-protein binding makes the devised method effective as a strategy for shortlisting the most promising aptamers both in terms of affinity and in terms of selectivity, to support subsequent development of aptamer-based analytical devices. Graphical abstract
- Published
- 2022
8. Application of Af4-Multidetection to Liraglutide in Its Formulation: Preserving and Representing Native Aggregation
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Valentina Marassi, Marco Macis, Stefano Giordani, Lucia Ferrazzano, Alessandra Tolomelli, Barbara Roda, Andrea Zattoni, Antonio Ricci, Pierluigi Reschiglian, Walter Cabri, Marassi,V., Macis,M., Giordani,S., Ferrazzano,L., Tolomelli,A., Roda,B., Zattoni,A., Ricci,A., Reschiglian,P., and Cabri,W.
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native aggregation state ,RLD ,Organic Chemistry ,Pharmaceutical Science ,Liraglutide ,FFF-multidetection ,Fractionation, Field Flow ,flow-field flow fractionation ,sameness ,therapeutic peptides ,active pharmaceutical ingredient (API) ,finished dosage form (FDF) ,reference listed drug ,Analytical Chemistry ,Chemistry (miscellaneous) ,Drug Discovery ,Molecular Medicine ,samene ,Physical and Theoretical Chemistry - Abstract
Aggregation is among the most critical parameters affecting the pharmacological and safety profile of peptide Active Pharmaceutical Ingredients (APIs). For this reason, it is of utmost importance to define the exact aggregation state of peptide drugs, particularly when the API is marketed as a ready-to-use solution. Consequently, appropriate non-destructive techniques able to replicate the peptide environment must be employed. In our work, we exploited Asymmetrical Flow Field-Flow Fractionation (AF4), connected to UV, dRI, fluorescence, and MALS detectors, to fully characterize the aggregation state of Liraglutide, a peptide API used for the treatment of diabetes type 2 and chronic obesity. In previous studies, Liraglutide was hypothesized to assemble into hexa-octamers in phosphate buffer, but no information on its behavior in the formulation medium was provided up to now. The method used allowed researchers to work using formulation as the mobile phase with excellent recoveries and LoQ/LoD, discerning between stable and degraded samples, and detecting, when present, aggregates up to 108 Da. The native state of Liraglutide was assessed and found to be an association into pentamers, with a non-spherical conformation. Combined to benchmark analyses, the sameness study was complete and descriptive, also giving insight on the aggregation process and covalent/non-covalent aggregate types.
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- 2022
9. Optimization of a Monobromobimane (MBB) Derivatization and RP-HPLC-FLD Detection Method for Sulfur Species Measurement in Human Serum after Sulfur Inhalation Treatment
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Barbara Roda, Nan Zhang, Laura Gambari, Brunella Grigolo, Cristina Eller-Vainicher, Luigi Gennari, Alessandro Zappi, Stefano Giordani, Valentina Marassi, Andrea Zattoni, Pierluigi Reschiglian, Francesco Grassi, Roda B., Zhang N., Gambari L., Grigolo B., Eller-Vainicher C., Gennari L., Zappi A., Giordani S., Marassi V., Zattoni A., Reschiglian P., and Grassi F.
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sulfur species ,Physiology ,Clinical Biochemistry ,biomarkers ,Cell Biology ,equipment and supplies ,Biochemistry ,hydrogen sulfide pool ,bone metabolism ,high-performance liquid chromatography with fluorescence ,monobromobimane ,monobromobimanesulfur species ,biomarker ,Molecular Biology ,hydrogen sulfide pool,biomarkers,bone metabolism,high-performance liquid chromatography with fluorescence,monobromobimanesulfur species - Abstract
(1) Background: Hydrogen sulfide (H2S) is a widely recognized gasotransmitter, with key roles in physiological and pathological processes. The accurate quantification of H2S and reactive sulfur species (RSS) may hold important implications for the diagnosis and prognosis of diseases. However, H2S species quantification in biological matrices is still a challenge. Among the sulfide detection methods, monobromobimane (MBB) derivatization coupled with reversed phase high-performance liquid chromatography (RP-HPLC) is one of the most reported. However, it is characterized by a complex preparation and time-consuming process, which may alter the actual H2S level; moreover, a quantitative validation has still not been described. (2) Methods: We developed and validated an improved analytical protocol for the MBB RP-HPLC method. MBB concentration, temperature and sample handling were optimized, and the calibration method was validated using leave-one-out cross-validation and tested in a clinical setting. (3) Results: The method shows high sensitivity and allows the quantification of H2S species, with a limit of detection of 0.5 µM. Finally, it can be successfully applied in measurements of H2S levels in the serum of patients subjected to inhalation with vapors rich in H2S. (4) Conclusions: These data demonstrate that the proposed method is precise and reliable for measuring H2S species in biological matrices and can be used to provide key insights into the etiopathogenesis of several diseases and sulfur-based treatments.
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- 2022
10. An ultracentrifugation - hollow-fiber flow field-flow fractionation orthogonal approach for the purification and mapping of extracellular vesicle subtypes
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Valentina Marassi, Pierluigi Reschiglian, Serena Maggio, Michele Guescini, Andrea Zattoni, Vilberto Stocchi, Barbara Roda, Michela Battistelli, Marassi V., Maggio S., Battistelli M., Stocchi V., Zattoni A., Reschiglian P., Guescini M., and Roda B.
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Multi-angle light scattering ,Extracellular Vesicle ,Population ,Multiangle light scattering ,Extracellular Vesicles ,Ultracentrifugation ,Hollow-fiber flow field-flow fractionation ,Size and morphology characterization ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Chemistry Techniques, Analytical ,Analytical Chemistry ,Mice ,Animals ,Centrifugation ,education ,Differential centrifugation ,education.field_of_study ,Chromatography ,Chemistry ,Vesicle ,010401 analytical chemistry ,Organic Chemistry ,Proteins ,DNA ,General Medicine ,Extracellular vesicle ,Fractionation, Field Flow ,Microvesicles ,0104 chemical sciences ,Biophysics ,Ultracentrifuge - Abstract
In the course of their life span, cells release a multitude of different vesicles in the extracellular matrix (EVs), constitutively and/or upon stimulation, carrying signals either inside or on their membrane for intercellular communication. As a natural delivery tool, EVs present many desirable advantages, such as biocompatibility and low toxicity. However, due to the complex biogenesis of EVs and their high heterogeneity in size distribution and composition, the characterization and quantification of EVs and their subpopulations still represents an enticing analytical challenge. Centrifugation methods allow to obtain different subpopulations in an easy way from cell culture conditioned medium and biological fluids including plasma, amniotic fluid and urine, but they still present some drawbacks and limitations. An unsatisfactory isolation can limit their downstream analysis and lead to wrong conclusions regarding biological activities. Isolation and characterization of biologically relevant nanoparticles like EVs is crucial to investigate specific molecular and signaling patterns and requires new combined approaches. Our work was focused on HF5 (miniaturized, hollow-fiber flow field-flow fractionation), and its hyphenation to ultracentrifugation techniques, which are the most assessed techniques for vesicle isolation. We exploited model samples obtained from culture medium of murine myoblasts (C2C12), known to release different subsets of membrane-derived vesicles. Large and small EVs (LEVs and SEVs) were isolated by differential ultracentrifugation (UC). Through an HF5 method employing UV, fluorescence and multi-angle laser scattering as detectors, we characterized these subpopulations in terms of size, abundance and DNA/protein content; moreover, we showed that microvesicles tend to hyper-aggregate and partially release nucleic matter. The quali-quantitative information we obtained from the fractographic profiles was improved with respect to Nano Tracking Analysis (NTA) estimation. The SEV population was then further separated using density gradient centrifugation (DGC), and four fractions were submitted again to HF5-multidetection. This technique is based on a fully orthogonal principle, since F4 does not separate by density, and provided uncorrelated information for each of the fractions processed. The "second dimension" achieved with HF5 showed good promise in sorting particles with both different size and content, and allowed to identify the presence of fibrilloid nucleic matter. This analytical bidimensional approach proved to be effective for the characterization of highly complex biological samples such as mixtures of EVs and could provide purified fractions for further biological characterization.
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- 2021
11. Perspectives on protein biopolymers: miniaturized flow field-flow fractionation-assisted characterization of a single-cysteine mutated phaseolin expressed in transplastomic tobacco plants
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Pierluigi Reschiglian, Valentina Marassi, Andrea Pompa, Barbara Roda, Andrea Zattoni, Francesca De Marchis, Alice Capecchi, Michele Bellucci, Marassi V., De Marchis F., Roda B., Bellucci M., Capecchi A., Reschiglian P., Pompa A., and Zattoni A.
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Signal peptide ,Biopolymer ,multi-angle light scattering ,Light ,Population ,engineering.material ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Analytical Chemistry ,Biopolymers ,Tobacco ,Native state ,transplastomic phaseolin ,Cysteine ,education ,Plant Proteins ,Peptide modification ,education.field_of_study ,Chromatography ,Miniaturization ,Chemistry ,hollow fiber flow field flow fractionation ,010401 analytical chemistry ,Organic Chemistry ,Plant Protein ,Fabaceae ,General Medicine ,Fractionation, Field Flow ,0104 chemical sciences ,protein biolpolymers ,Molecular Weight ,Phaseolin ,protein biolpolymer ,engineering ,Biophysics ,Transcriptome ,Transplastomic plant - Abstract
The development of plant-based protein polymers to employ in biofilm production represents the promising intersection between material science and sustainability, and allows to obtain biodegradable materials that also possess excellent physicochemical properties. A possible candidate for protein biopolymer production is phaseolin, a storage protein highly abundant in P Vulgaris beans. We previously showed that transformed tobacco chloroplasts could be employed to express a mutated phaseolin carrying a signal peptide (directing it into the thylakoids) also enriched of a cysteine residue added to its C-terminal region. This modification allows for the formation of inter-chain disulfide bonds, as we previously demonstrated, and should promote polymerization. To verify the effect of the peptide modification and to quantify polymer formation, we employed hollow-fiber flow field-flow fractionation coupled to UV and multi-angle laser scattering detection (HF5-UV-MALS): HF5 allows for the selective size-based separation of phaseolin species, whereas MALS calculates molar mass and conformation state of each population. With the use of two different HF5 separation methods we first observed the native state of P.Vulgaris phaseolin, mainly assembled into trimers, and compared it to mutated phaseolin (P*) which instead resulted highly aggregated. Then we further characterized P* using a second separation method, discriminating between two and distinct high-molecular weight (HMW) species, one averaging 0.8 × 106 Da and the second reaching the tens of million Da. Insight on the conformation of these HMW species was offered from their conformation plots, which confirmed the positive impact of the Cys modification on polymerization.
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- 2021
12. Comprehensive characterization of gold nanoparticles and their protein conjugates used as a label by hollow fiber flow field flow fractionation with photodiode array and fluorescence detectors and multiangle light scattering
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Pierluigi Reschiglian, Valentina Marassi, Barbara Roda, Andrea Zattoni, Donato Calabria, Ilaria Trozzi, Marassi V., Calabria D., Trozzi I., Zattoni A., Reschiglian P., and Roda B.
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Antibodie ,Multiangle light scattering ,Metal Nanoparticles ,Conjugated system ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Antibodies ,Analytical Chemistry ,law.invention ,Metal Nanoparticle ,Mice ,law ,Animals ,Surface plasmon resonance ,Chromatography ,Chemistry ,Animal ,010401 analytical chemistry ,Organic Chemistry ,General Medicine ,Surface Plasmon Resonance ,Fluorescence ,Fractionation, Field Flow ,0104 chemical sciences ,Photodiode ,Colloidal gold ,Spectrophotometry ,Immunoglobulin G ,Particle ,Fluorescein ,Gold ,Conjugate - Abstract
Most of lateral flow immunoassay (LFIA) devices rely on gold nanoparticles (GNP) labeled antibodies or other biospecific proteins, to achieve reagent-less color-based detection. GNP size, GNP-protein conjugation level and its stability are crucial points for the development of precise and accurate methods. In addition, the purification of the GNP-protein conjugates from unreacted protein and GNP, is necessary for adequate analytical performance of the assay. To assist the synthesis and production process of GNP and their protein conjugates, we use for the first time a non-destructive, particle separation-multi-detection approach based on miniaturized flow field flow fractionation (HF5). A separation method was developed to baseline size-separate GNP, GNP-protein, protein and GNP including BSA used as a surface coater in less than 30 minutes. Freshly synthesized GNP were first characterized and then conjugated with two different model antibodies: a mouse immunoglobulin (IgG) and a fluorescein-labeled mouse immunoglobulin (FITC-IgG). The IgG-GNP complexes were fractionated using the HF5 apparatus, able to separate IgG-GNP from free proteins by their hydrodynamic size, allowing purification of the conjugation product. Both IgG-GNPs and GNPs were characterized according to their size by the MALS detector, and according to their Surface Plasmon Resonance and spectrum by UV-Vis detection, improving the results obtained via batch characterization. This simple non-invasive approach is very useful for the LFIA development and optimization: the use of HF5-mutidetection offers a unique tool for this purpose facilitating the industrialization of the process and the relate optimization and standardization.
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- 2021
13. A new approach for the separation, characterization and testing of potential prionoid protein aggregates through hollow-fiber flow field-flow fractionation and multi-angle light scattering
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Andrea Alessandrini, Andrea Zattoni, Paolo Facci, Marinella Portolani, Valentina Marassi, Tullia Maraldi, Pierluigi Reschiglian, Barbara Roda, Francesca Beretti, Marassi V., Beretti F., Roda B., Alessandrini A., Facci P., Maraldi T., Zattoni A., Reschiglian P., and Portolani M.
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Light ,Prions ,Ion chromatography ,Multiangle light scattering ,Amyloidogenic Proteins ,02 engineering and technology ,Fractionation ,Field flow fractionation to study aggregation-dependent disease ,Protein aggregation ,Prionoid protein aggregate ,Microscopy, Atomic Force ,01 natural sciences ,Biochemistry ,Analytical Chemistry ,Protein–protein interaction ,Field flow fractionation to study aggregation-dependent diseases ,HF5 MALS of protein aggregates ,Prionoid protein aggregates ,Protein-derived toxic pathways ,HF5 MALS of protein aggregate ,Protein Aggregates ,Cell Line, Tumor ,Humans ,Scattering, Radiation ,Environmental Chemistry ,Particle Size ,Cytotoxicity ,Spectroscopy ,Chemistry ,010401 analytical chemistry ,Chromatography, Ion Exchange ,021001 nanoscience & nanotechnology ,Fractionation, Field Flow ,Amyloidogenic Protein ,0104 chemical sciences ,Prion ,Biophysics ,Protein-derived toxic pathway ,Molar mass distribution ,Protein folding ,0210 nano-technology ,Human - Abstract
Protein misfolding and aggregation are the common mechanisms in a variety of aggregation-dependent diseases. The compromised proteins often assemble into toxic, accumulating amyloid-like structures of various lengths and their toxicity can also be transferred both in vivo and in vitro a prion-like behavior. The characterization of protein interactions, degradation and conformational dynamics in biological systems still represents an analytical challenge in the prion-like protein comprehension. In our work, we investigated the nature of a transferable cytotoxic agent, presumably a misfolded protein, through the coupling of a multi-detector, non-destructive separation platform based on hollow-fiber flow field-flow fractionation with imaging and downstream in vitro tests. After purification with ion exchange chromatography, the transferable cytotoxic agentwas analyzed with Atomic Force Microscopy and statistical analysis, showing that the concentration of protein dimers and low n-oligomer forms was higher in the cytotoxic sample than in the control preparation. To assess whether the presence of these species was the actual toxic and/or self-propagating factor, we employed HF5 fractionation, with UV and Multi-Angle Light Scattering detection, to define proteins molar mass distribution and abundance, and fractionate the sample into size-homogeneous fractions. These fractions were then tested individually in vitro to investigate the direct correlation with cytotoxicity. Only the later-eluted fraction, which contains high-molar mass aggregates, proved to be toxic onto cell cultures. Moreover, it was observed that the selective transfer of toxicity also occurs for one lower-mass fraction, suggesting that two different mechanisms, acute and later induced toxicity, are in place. These results strongly encourage the efficacy of this platform to enable the identification of protein toxicants.
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- 2019
14. Compact Miniaturized Bioluminescence Sensor Based on Continuous Air-Segmented Flow for Real-Time Monitoring: Application to Bile Salt Hydrolase (BSH) Activity and ATP Detection in Biological Fluids
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Valentina Marassi, Antimo Gioiello, Pierpaolo Greco, Barbara Roda, Giada Moroni, Patrizia Simoni, Aldo Roda, Roda A., Greco P., Simoni P., Marassi V., Moroni G., Gioiello A., and Roda B.
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Bile salt hydrolase-BSH ,Microdialysis ,Continuous flow assay ,QD415-436 ,Bile acid ,Biochemistry ,01 natural sciences ,NO ,Analytical Chemistry ,03 medical and health sciences ,Biological fluids ,Bioluminescence ,Luciferase ,Physical and Theoretical Chemistry ,030304 developmental biology ,bile acids ,0303 health sciences ,Chromatography ,Aminoluciferin ,Sensors ,Chemistry ,010401 analytical chemistry ,Detector ,Substrate (chemistry) ,0104 chemical sciences ,bioluminescence, luciferase, aminoluciferin, ATP, bile acids, bile salt hydrolase-BSH, sensors, continuous flow assay ,ATP ,luciferase ,aminoluciferin ,bile salt hydrolase-BSH ,sensors ,continuous flow assay ,Light emission ,Bile salt hydrolase - Abstract
A simple and versatile continuous air-segmented flow sensor using immobilized luciferase was designed as a general miniaturized platform based on sensitive biochemiluminescence detection. The device uses miniaturized microperistaltic pumps to deliver flows and compact sensitive light imaging detectors based on BI-CMOS (smartphone camera) or CCD technology. The low-cost components and power supply make it suitable as out-lab device at point of need to monitor kinetic-related processes or ex vivo dynamic events. A nylon6 flat spiral carrying immobilized luciferase was placed in front of the detector in lensless mode using a fiber optic tapered faceplate. ATP was measured in samples collected by microdialysis from rat brain with detecting levels as low as 0.4 fmoles. The same immobilized luciferase was also used for the evaluation of bile salt hydrolase (BSH) activity in intestinal microbiota. An aminoluciferin was conjugatated with chenodeoxycholic acid forming the amide derivative aLuc-CDCA. The hydrolysis of the aLuc-CDCA probe by BSH releases free uncaged aminoluciferin which is the active substrate for luciferase leading to light emission. This method can detect as low as 0.5 mM of aLuc-CDCA, so it can be used on real faecal human samples to study BSH activity and its modulation by diseases and drugs.
- Published
- 2021
15. Hollow fiber flow field-flow fractionation and size-exclusion chromatography with multi-angle light scattering detection: A complementary approach in biopharmaceutical industry
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Pierluigi Reschiglian, Valentina Marassi, Barbara Roda, Maya Tanase, Andrea Zattoni, Marassi, V, Roda, B., Zattoni, A., Tanase, M., and Reschiglian, P.
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Chromatography ,Chemistry ,Hollow fiber flow field-flow fractionation of mAb ,MS-compatible mobile phase ,Organic Chemistry ,Size-exclusion chromatography ,Therapeutic monoclonal antibodies (mAbs) characterization ,Multiangle light scattering ,Formulation-like buffer mobile phase ,General Medicine ,Fractionation ,Biochemistry ,Light scattering ,Analytical Chemistry ,Characterization (materials science) ,Size exclusion chromatography of mAb ,Biopharmaceutical industry ,Fiber ,Flow Field-Flow Fractionation - Abstract
Monoclonal antibodies (mAbs) are promising reagents both for the manufacture of drug substances and for their employment as a drug themselves, but to be approved for utilization, according to FDA recommendations and WHO guidelines, they have to undergo verifications regarding their purity, stability and percentage of aggregates. Moreover, stability tests of lots have to be performed in order to verify molecular size distribution over time and lot-to-lot consistency. Recent works in literature have highlighted the need for suitable, sensitive and reliable complementary analytical techniques for the characterization of mAbs and quantification of aggregates. Size-exclusion chromatography (SEC) is the reference technique in the biopharmaceutical industry for its robustness, high performance and simple use; however it presents some limitations especially toward the separation and detection of aggregates with high molecular weight. On the other hand, flow field-flow fractionation (F4) in its miniaturized version (hollow fiber flow field-flow fractionation, HF5) shows comparable performances with interesting additional advantages: a broad size range, gentle separation mechanism with low dilution factor and higher sensitivity. To propose HF5 as a complementary technique for evaluating aggregates' content in mAbs samples, a comparative study of both SEC and HF5 performances has been made. In this work, SEC and HF5 were coupled with UV and multi-angle light scattering detection and employed first in separating standard samples of proteins mixture used as a sample model. Then, a screening of mobile phases and an evaluation of separation performances was performed on a therapeutic mAbs formulation, demonstrating the complementarities between SEC and HF5 and their possible use as a separative platform approach for the characterization and quality control of protein drugs. © 2014 Elsevier B.V.
- Published
- 2014
16. Hollow-fiber flow field-flow fractionation with multi-angle laser scattering detection for aggregation studies of therapeutic proteins Field-Flow Fractionation
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RESCHIGLIAN, PIERLUIGI, RODA, BARBARA, ZATTONI, ANDREA, TANASE, OTILIA MAYA, MARASSI, VALENTINA, Serani, S., Reschiglian, P., Roda, B., Zattoni, A., Tanase, M., Marassi, V., and Serani, S.
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Multi-angle light scattering for complex protein sample ,Protein Denaturation ,Light ,Animal ,Protein ,Laser ,Reproducibility of Result ,Serum Albumin, Bovine ,Therapeutic proteins characterization ,Hollow-fiber flow field-flow fractionation (HF5) ,Avidin ,Biochemistry ,Fractionation, Field Flow ,Analytical Chemistry ,Reversible and irreversible aggregate ,Limit of Detection ,Scattering, Radiation ,Cattle ,Particle Size ,Quality control of therapeutic protein - Abstract
The rapid development of protein-based pharmaceuticals highlights the need for robust analytical methods to ensure their quality and stability. Among proteins used in pharmaceutical applications, an important and ever increasing role is represented by monoclonal antibodies and large proteins, which are often modified to enhance their activity or stability when used as drugs. The bioactivity and the stability of those proteins are closely related to the maintenance of their complex structure, which however are influenced by many external factors that can cause degradation and/or aggregation. The presence of aggregates in these drugs could reduce their bioactivity and bioavailability, and induce immunogenicity. The choice of the proper analytical method for the analysis of aggregates is fundamental to understand their (size) dimensional range, their amount, and if they are present in the sample as generated by an aggregation or as an artifact due to the method itself. Size exclusion chromatography is one of the most important techniques for the quality control of pharmaceutical proteins; however, its application is limited to relatively low molar mass aggregates. Among the techniques for the size characterization of proteins, field-flow fractionation (FFF) represents a competitive choice because of its soft mechanism due to the absence of a stationary phase and application in a broader size range, from nanometer- to micrometer-sized analytes. In this paper, the microcolumn variant of FFF, the hollow-fiber flow FFF, was online coupled with multi-angle light scattering, and a method for the characterization of aggregates with high reproducibility and low limit of detection was demonstrated employing an avidin derivate as sample model
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- 2014
17. A multi-technique analytical approach to support (eco)toxicological investigation of zinc oxide nanoparticles.
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Zanoni I, Marassi V, Zattoni A, Roda B, Casolari S, Ortelli S, Blosi M, and Costa AL
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- Humans, Metal Nanoparticles chemistry, Metal Nanoparticles toxicity, Fractionation, Field Flow methods, Solubility, Hydrogen-Ion Concentration, Ultrafiltration methods, Nanoparticles chemistry, Nanoparticles toxicity, Zinc Oxide chemistry, Zinc Oxide toxicity
- Abstract
Understanding the mechanism of toxicity of nanoparticles and their behavior in biological environments is crucial for designing materials with reduced side effects and improved performance. Among the factors influencing nanoparticle behavior in biological environments, the release and bioavailability of potentially toxic metal ions can alter equilibria and cause adverse effects. In this study, we applied two on-line Field-Flow Fractionation (FFF) strategies and compared the results with off-line benchmarking centrifugal ultrafiltration to assess a key descriptor, namely the solubility of zinc oxide (ZnO) nanoparticles. We found that, at the highest nanoparticle concentrations, the nanoparticle-ion ratio quickly reaches equilibrium, and the stability is not significantly affected by the separation technique. However, at lower concentrations, dynamic, non-equilibrium behavior occurs, and the results depend on the method used to separate the solid from the ionic fraction, where FFF yielded a more representative dissolution pattern. To support the (eco)toxicological profiling of the investigated nanoparticles, we generated experimental data on colloidal stability over typical (eco)toxicological assay durations. The Zeta Potential vs pH curves revealed two distinct scenarios typical of surfaces that have undergone significant modification, most likely due to pH-dependent dissolution and re-precipitation of surface groups. Finally, to enhance hazard assessment screening, we investigated ion-dependent toxicity and the effects of exposure to fresh water. Using an in vitro human skin model, we evaluated the cytotoxicity of fresh and aged ZnO nanoparticles (exposed for 72 h in M7), revealing time-dependent, dose-dependent, and nanoparticle-dependent cytotoxicity, with lower toxicity observed in the case of aged samples., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)
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- 2024
- Full Text
- View/download PDF
18. Native characterization and QC profiling of human amniotic mesenchymal stromal cell vesicular fractions for secretome-based therapy.
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Marassi V, La Rocca G, Placci A, Muntiu A, Vincenzoni F, Vitali A, Desiderio C, Maraldi T, Beretti F, Russo E, Miceli V, Conaldi PG, Papait A, Romele P, Cargnoni A, Silini AR, Alviano F, Parolini O, Giordani S, Zattoni A, Reschiglian P, and Roda B
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- Humans, Quality Control, Cells, Cultured, Mesenchymal Stem Cells cytology, Mesenchymal Stem Cells metabolism, Secretome metabolism, Amnion chemistry, Amnion cytology, Amnion metabolism, Extracellular Vesicles chemistry, Extracellular Vesicles metabolism
- Abstract
Human amniotic mesenchymal stromal cells (hAMSCs) have unique immunomodulatory properties making them attractive candidates for regenerative applications in inflammatory diseases. Most of their beneficial properties are mediated through their secretome. The bioactive factors concurring to its therapeutic activity are still unknown. Evidence suggests synergy between the two main components of the secretome, soluble factors and vesicular fractions, pivotal in shifting inflammation and promoting self-healing. Biological variability and the absence of quality control (QC) protocols hinder secretome-based therapy translation to clinical applications. Moreover, vesicular secretome contains a multitude of particles with varying size, cargos and functions whose complexity hinders full characterization and comprehension. This study achieved a significant advancement in secretome characterization by utilizing native, FFF-based separation and characterizing extracellular vesicles derived from hAMSCs. This was accomplished by obtaining dimensionally homogeneous fractions then characterized based on their protein content, potentially enabling the identification of subpopulations with diverse functionalities. This method proved to be successful as an independent technique for secretome profiling, with the potential to contribute to the standardization of a qualitative method. Additionally, it served as a preparative separation tool, streamlining populations before ELISA and LC-MS characterization. This approach facilitated the categorization of distinctive and recurring proteins, along with the identification of clusters associated with vesicle activity and functions. However, the presence of proteins unique to each fraction obtained through the FFF separation tool presents a challenge for further analysis of the protein content within these cargoes., Competing Interests: Funding The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper: Ornella Parolini reports financial support was provided by PRIN 2017 program of Italian Ministry of Research and University (MIUR, Grant No. 2017RSAFK7). If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Author(s). Published by Elsevier B.V. All rights reserved.)
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- 2024
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19. Emerging technologies for quality control of cell-based, advanced therapy medicinal products.
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Zia S, Pizzuti V, Paris F, Alviano F, Bonsi L, Zattoni A, Reschiglian P, Roda B, and Marassi V
- Subjects
- Animals, Humans, Quality Control, Cell- and Tissue-Based Therapy methods, Cell- and Tissue-Based Therapy standards, Genetic Therapy methods, Genetic Therapy standards, Tissue Engineering methods, Tissue Engineering standards
- Abstract
Advanced therapy medicinal products (ATMP) are complex medicines based on gene therapy, somatic cell therapy, and tissue engineering. These products are rapidly arising as novel and promising therapies for a wide range of different clinical applications. The process for the development of well-established ATMPs is challenging. Many issues must be considered from raw material, manufacturing, safety, and pricing to assure the quality of ATMPs and their implementation as innovative therapeutic tools. Among ATMPs, cell-based ATMPs are drugs altogether. As for standard drugs, technologies for quality control, and non-invasive isolation and production of cell-based ATMPs are then needed to ensure their rapidly expanding applications and ameliorate safety and standardization of cell production. In this review, emerging approaches and technologies for quality control of innovative cell-based ATMPs are described. Among new techniques, microfluid-based systems show advantages related to their miniaturization, easy implementation in analytical process and automation which allow for the standardization of the final product., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)
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- 2024
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20. Comprehensive analysis of colloid formation, distribution, and properties of monovarietal red wines using asymmetrical flow field-flow fractionation with online multidetection.
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Marangon M, Marassi V, Roda B, Zattoni A, Reschiglian P, Mattivi F, Moio L, Ricci A, Piombino P, Segade SR, Giacosa S, Slaghenaufi D, Versari A, Vrhovsek U, Ugliano M, De Iseppi A, Mayr Marangon C, and Curioni A
- Subjects
- Fermentation, Particle Size, Wine analysis, Colloids chemistry, Fractionation, Field Flow methods
- Abstract
Red wine colloids, crucial in determining wine quality and stability, are understudied due to inadequate techniques for studying them effectively in the natural wine environment. Recently, Asymmetrical Flow Field-flow Fractionation (AF4) with online multidetection has emerged as a novel analytical tool for quantifying, fractionating, and characterizing red wine colloids in their native state. This study aimed to characterize the colloidal composition of 24 monovarietal Italian wines produced without filtration, oak contact, fining treatments, malolactic fermentation, macerating enzymes or ageing on yeast lees. AF4 analysis allowed quantification and characterization of wine colloids based on light scattering signal (MALS; gyration radius - Rg), size (hydrodynamic radius - Rh) and absorbance (A
280 & A520 nm). The results showed that each wine contained up to five distinct colloids' populations, varying in size and gyration radii. Despite possessing very similar Rh, most colloids exhibited great differences in compactness, as indicated by their varying Rg values. Comparing the A280 signal of whole wines to those of wines containing only species larger than 5 kDa (considered colloids) allowed to calculate the percentage of molecules involved in colloidal particles assembly, ranging from 1 to 44 % of the total A280 absorbing compounds, reflecting the diversity among wines. The A520 signal indicated the presence of polymeric pigments in the colloidal fraction. Notably, colored colloids all had Rg > 20 nm, indicating their association with other colloidal-forming compounds. This observation led to the conclusion that, apart from free anthocyanins and polymeric pigments, the color of red wines is also due to colloidal particles formed by the latter bound to proteins, with their quantity being highly variable across wines of different origin. These findings, which highlight the fundamental role of proteins in shaping the colloidal status of red wines, were utilized to propose an updated hypothetical model for colloidal aggregation in red wine., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Andrea Zattoni, Barbara Roda, Pierluigi Reschiglian and Valentina Marassi are associates of the academic spinoff company byFlow Srl (Bologna, Italy). The company mission includes know-how transfer, development, and application of novel technologies and methodologies for the analysis and characterization of samples of nano-biotechnological interest., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)- Published
- 2024
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21. Rapid and green discrimination of bovine milk according to fat content, thermal treatment, brand and manufacturer via colloidal fingerprinting.
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Giordani S, Kassouf N, Zappi A, Zattoni A, Roda B, Melucci D, and Marassi V
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- Animals, Multivariate Analysis, Food Safety, Milk chemistry, Fractionation, Field Flow
- Abstract
Addressing food safety and detecting food fraud while fulfilling greenness requisites for analysis is a challenging but necessary task. The use of sustainable techniques, with limited pretreatment, non-toxic chemicals, high throughput results, is recommended. A combination of Field Flow Fractionation (FFF), working in saline carrier and with minimal preprocessing, and chemometrics was for the first time applied to bovine milk grouping. A set of 47 bovine milk samples was analyzed: a single analysis yielded a characteristic multidimensional colloidal dataset, that once processed with multivariate tools allowed simultaneously for different discriminations: fat content, thermal treatment, brand and manufacturing plant. The analytical methodology is fast, green, simple, and inexpensive and could offer great help in the field of quality control and frauds identification. This work represents also the first attempt to identify milk sub-typologies based on colloidal profiles, and the most complete study concerning multivariate analysis of FFF fingerprint., Competing Interests: Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Valentina Marassi, Barbara Roda, Andrea Zattoni are associates of the spinoff company byFlow srl. The company mission includes know-how transfer, development, and application of novel technologies and methodologies for the analysis and characterization of samples of nano-biotechnological interest, (Copyright © 2023 The Author(s). Published by Elsevier Ltd.. All rights reserved.)
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- 2024
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22. Are Aptamers Really Promising as Receptors for Analytical Purposes? Insights into Anti-Lysozyme DNA Aptamers through a Multitechnique Study.
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Toma L, Mattarozzi M, Ronda L, Marassi V, Zattoni A, Fortunati S, Giannetto M, and Careri M
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- Muramidase, Reproducibility of Results, SELEX Aptamer Technique methods, Antibodies, Antinuclear, Aptamers, Nucleotide chemistry
- Abstract
Aptamers are recognition elements increasingly used for the development of biosensing strategies, especially in the detection of proteins or small molecule targets. Lysozyme, which is recognized as an important biomarker for various diseases and a major allergenic protein found in egg whites, is one of the main analytical targets of aptamer-based biosensors. However, since aptamer-based strategies can be prone to artifacts and data misinterpretation, rigorous strategies for multifaceted characterization of the aptamer-target interaction are needed. In this work, a multitechnique approach has been devised to get further insights into the binding performance of the anti-lysozyme DNA aptamers commonly used in the literature. To study molecular interactions between lysozyme and different anti-lysozyme DNA aptamers, measurements based on a magneto-electrochemical apta-assay, circular dichroism spectroscopy, fluorescence spectroscopy, and asymmetrical flow field-flow fractionation were performed. The reliability and versatility of the approach were proved by investigating a SELEX-selected RNA aptamer reported in the literature, that acts as a positive control. The results confirmed that an interaction in the low micromolar range is present in the investigated binding buffers, and the binding is not associated with a conformational change of either the protein or the DNA aptamer. The similar behavior of the anti-lysozyme DNA aptamers compared to that of randomized sequences and polythymine, used as negative controls, showed nonsequence-specific interactions. This study demonstrates that severe testing of aptamers resulting from SELEX selection is the unique way to push these biorecognition elements toward reliable and reproducible results in the analytical field.
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- 2024
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23. A biotechnological approach for the production of new protein bioplastics.
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De Marchis F, Vanzolini T, Maricchiolo E, Bellucci M, Menotta M, Di Mambro T, Aluigi A, Zattoni A, Roda B, Marassi V, Crinelli R, and Pompa A
- Subjects
- Plants, Biopolymers, Nicotiana genetics, Disulfides, Biocompatible Materials, Escherichia coli genetics, Biotechnology
- Abstract
The future of biomaterial production will leverage biotechnology based on the domestication of cells as biological factories. Plants, algae, and bacteria can produce low-environmental impact biopolymers. Here, two strategies were developed to produce a biopolymer derived from a bioengineered vacuolar storage protein of the common bean (phaseolin; PHSL). The cys-added PHSL* forms linear-structured biopolymers when expressed in the thylakoids of transplastomic tobacco leaves by exploiting the formation of inter-chain disulfide bridges. The same protein without signal peptide (ΔPHSL*) accumulates in Escherichia coli inclusion bodies as high-molar-mass species polymers that can subsequently be oxidized to form disulfide crosslinking bridges in order to increase the stiffness of the biomaterial, a valid alternative to the use of chemical crosslinkers. The E. coli cells produced 300 times more engineered PHSL, measured as percentage of total soluble proteins, than transplastomic tobacco plants. Moreover, the thiol groups of cysteine allow the site-specific PEGylation of ΔPHSL*, which is a desirable functionality in the design of a protein-based drug carrier. In conclusion, ΔPHSL* expressed in E. coli has the potential to become an innovative biopolymer., (© 2023 The Authors. Biotechnology Journal published by Wiley-VCH GmbH.)
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- 2024
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24. The dual nature of biomimetic melanin.
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Mavridi-Printezi A, Giordani S, Menichetti A, Mordini D, Zattoni A, Roda B, Ferrazzano L, Reschiglian P, Marassi V, and Montalti M
- Subjects
- Dopamine, Spectrum Analysis, Polymers chemistry, Melanins chemistry, Biomimetics
- Abstract
Melanin-inspired nanomaterials offer unique photophysical, electronic and radical scavenging properties that are widely explored for health and environmental preservation, or energy conversion and storage. The incorporation of functional melanin building blocks in more complex nanostructures or surfaces is typically achieved via a bottom-up approach starting from a molecular precursor, in most cases dopamine. Here we demonstrate that indeed, the oxidative polymerization of dopamine, for the synthesis of melanin-like polydopamine (PDA), leads to the simultaneous formation of more than one nanosized species with different compositions, morphologies and properties. In particular, a low-density polymeric structure and dense nanoparticles ( NP ) are simultaneously formed. The two populations could be separated and analyzed in real time using a chromatographic technique free of any stationary phase (flow field fractionation, FFF). The results following the synthesis of melanin-like PDA showed that the NP are formed only during the first 6 hours as a result of a supramolecular self-assembly-driven polymerization, while the formation of the polymer continues for about 36 hours. The two populations were also separated and characterized using TEM, UV-vis absorption spectroscopy, fluorescence and light scattering spectroscopy, DLS, FTIR, ζ-potential measurements, gel electrophoresis and pH titrations. Interestingly, very different properties between the two populations were observed: in particular the polymer contains a higher number of catechol units (8 mmol g
-1 -OH) with respect to the NP (1 mmol g-1 -OH) and presents a much higher antioxidant activity. The attenuation of light by NP is more efficient than that by the polymer especially in the Vis-NIR region. Moreover, while the NP scatter light with an efficiency up to 27% they are not fluorescent, and the polymer does not scatter light but shows an excitation wavelength-dependent fluorescence typical of multi-fluorophoric uncoupled systems.- Published
- 2023
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25. Critical aspects in dissolution testing of nanomaterials in the oro-gastrointestinal tract: the relevance of juice composition for hazard identification and grouping.
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Di Cristo L, Keller JG, Leoncino L, Marassi V, Loosli F, Seleci DA, Tsiliki G, Oomen AG, Stone V, Wohlleben W, and Sabella S
- Abstract
The dissolution of a nanomaterial (NM) in an in vitro simulant of the oro-gastrointestinal (OGI) tract is an important predictor of its biodurability in vivo . The cascade addition of simulated digestive juices (saliva, stomach and intestine), including inorganic/organic biomacromolecules and digestive enzymes (complete composition, referred to as "Type 1 formulation"), strives for realistic representation of chemical composition of the OGI tract. However, the data robustness requires consideration of analytical feasibility, such as the use of simplified media. Here we present a systematic analysis of the effects exerted by different digestive juice formulations on the dissolution% (or half-life values) of benchmark NMs ( e.g. , zinc oxide, titanium dioxide, barium sulfate, and silicon dioxide). The digestive juices were progressively simplified by removal of components such as organic molecules, enzymes, and inorganic molecules (Type 2, 3 and 4). The results indicate that the "Type 1 formulation" augments the dissolution via sequestration of ions by measurable factors compared to formulations without enzymes ( i.e. , Type 3 and 4). Type 1 formulation is thus regarded as a preferable option for predicting NM biodurability for hazard assessment. However, for grouping purposes, the relative similarity among diverse nanoforms (NFs) of a NM is decisive. Two similarity algorithms were applied, and additional case studies comprising NFs and non NFs of the same substance were included. The results support the grouping decision by simplified formulation (Type 3) as a robust method for screening and grouping purposes., Competing Interests: At the time of the study, JGK and WW were employees of BASF SE, a company producing nanomaterials. The other authors declare that they have no competing interests., (This journal is © The Royal Society of Chemistry.)
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- 2023
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26. Liposomes characterization for market approval as pharmaceutical products: Analytical methods, guidelines and standardized protocols.
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Giordani S, Marassi V, Zattoni A, Roda B, and Reschiglian P
- Subjects
- Drug Liberation, Liposomes, Drug Delivery Systems methods
- Abstract
Liposomes are nano-sized lipid-based vesicles widely studied for their drug delivery capabilities. Compared to standard carries they exhibit better properties such as improved site-targeting and drug release, protection of drugs from degradation and clearance, and lower toxic side effects. At present, scientific literature is rich of studies regarding liposomes-based systems, while 14 types of liposomal products have been authorized to the market by EMA and FDA and many others have been approved by national agencies. Although the interest in nanodevices and nanomedicine has steadily increased in the last two decades the development of documentation regulating and standardizing all the phases of their development and quality control still suffers from major inadequacy due to the intrinsic complexity of nano-systems characterization. Many generic documents (Type 1) discussing guidelines for the study of nano-systems (lipidic and not) have been proposed while there is a lack of robust and standardized methods (Type 2 documents). As a result, a widespread of different techniques, approaches and methodologies are being used, generating results of variable quality and hard to compare with each other. Additionally, such documents are often subject to updates and rewriting further complicating the topic. Within this context the aim of this work is focused on bridging the gap in liposome characterization: the most recent standardized methodologies suitable for liposomes characterization are here reported (with the corresponding Type 2 documents) and revised in a short and pragmatical way focused on providing the reader with a practical background of the state of the art. In particular, this paper will put the accent on the methodologies developed to evaluate the main critical quality attributes (CQAs) necessary for liposomes market approval., Competing Interests: Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests. Valentina Marassi reports financial support was provided by Government of Italy Ministry of Education University and Research. Valentina Marassi, Barbara Roda, Andrea Zattoni and Pierluigi Reschiglian are associates of the spinoff company byFlow srl. The company mission includes know-how transfer, development, and application of novel technologies and methodologies for the analysis and characterization of samples of nano-biotechnological interest., (Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2023
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27. Emerging Microfluidic Tools for Simultaneous Exosomes and Cargo Biosensing in Liquid Biopsy: New Integrated Miniaturized FFF-Assisted Approach for Colon Cancer Diagnosis.
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Marassi V, Giordani S, Placci A, Punzo A, Caliceti C, Zattoni A, Reschiglian P, Roda B, and Roda A
- Subjects
- Humans, Microfluidics, Liquid Biopsy methods, Biomarkers analysis, Cell Communication, Exosomes chemistry, Colonic Neoplasms diagnosis
- Abstract
The early-stage diagnosis of cancer is a crucial clinical need. The inadequacies of surgery tissue biopsy have prompted a transition to a less invasive profiling of molecular biomarkers from biofluids, known as liquid biopsy. Exosomes are phospholipid bilayer vesicles present in many biofluids with a biologically active cargo, being responsible for cell-to-cell communication in biological systems. An increase in their excretion and changes in their cargo are potential diagnostic biomarkers for an array of diseases, including cancer, and they constitute a promising analyte for liquid biopsy. The number of exosomes released, the morphological properties, the membrane composition, and their content are highly related to the physiological and pathological states. The main analytical challenge to establishing liquid biopsy in clinical practice is the development of biosensors able to detect intact exosomes concentration and simultaneously analyze specific membrane biomarkers and those contained in their cargo. Before analysis, exosomes also need to be isolated from biological fluids. Microfluidic systems can address several issues present in conventional methods (i.e., ultracentrifugation, size-exclusion chromatography, ultrafiltration, and immunoaffinity capture), which are time-consuming and require a relatively high amount of sample; in addition, they can be easily integrated with biosensing systems. A critical review of emerging microfluidic-based devices for integrated biosensing approaches and following the major analytical need for accurate diagnostics is presented here. The design of a new miniaturized biosensing system is also reported. A device based on hollow-fiber flow field-flow fractionation followed by luminescence-based immunoassay is applied to isolate intact exosomes and characterize their cargo as a proof of concept for colon cancer diagnosis.
- Published
- 2023
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28. Field-Flow Fractionation in Molecular Biology and Biotechnology.
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Giordani S, Marassi V, Placci A, Zattoni A, Roda B, and Reschiglian P
- Subjects
- Molecular Biology, Food, Industry, Biotechnology, Fractionation, Field Flow
- Abstract
Field-flow fractionation (FFF) is a family of single-phase separative techniques exploited to gently separate and characterize nano- and microsystems in suspension. These techniques cover an extremely wide dynamic range and are able to separate analytes in an interval between a few nm to 100 µm size-wise (over 15 orders of magnitude mass-wise). They are flexible in terms of mobile phase and can separate the analytes in native conditions, preserving their original structures/properties as much as possible. Molecular biology is the branch of biology that studies the molecular basis of biological activity, while biotechnology deals with the technological applications of biology. The areas where biotechnologies are required include industrial, agri-food, environmental, and pharmaceutical. Many species of biological interest belong to the operational range of FFF techniques, and their application to the analysis of such samples has steadily grown in the last 30 years. This work aims to summarize the main features, milestones, and results provided by the application of FFF in the field of molecular biology and biotechnology, with a focus on the years from 2000 to 2022. After a theoretical background overview of FFF and its methodologies, the results are reported based on the nature of the samples analyzed.
- Published
- 2023
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29. Controlled Release of H 2 S from Biomimetic Silk Fibroin-PLGA Multilayer Electrospun Scaffolds.
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Liguori A, Petri E, Gualandi C, Dolci LS, Marassi V, Petretta M, Zattoni A, Roda B, Grigolo B, Olivotto E, Grassi F, and Focarete ML
- Subjects
- Tissue Scaffolds chemistry, Delayed-Action Preparations, Biomimetics, Tissue Engineering methods, Silk, Fibroins chemistry, Nanofibers chemistry
- Abstract
The possibility of incorporating H
2 S slow-release donors inside biomimetic scaffolds can pave the way to new approaches in the field of tissue regeneration and anti-inflammatory treatment. In the present work, GYY4137, an easy-to-handle commercially available Lawesson's reagent derivative, has been successfully incorporated inside biomimetic silk fibroin-based electrospun scaffolds. Due to the instability of GYY4137 in the solvent needed to prepare silk fibroin solutions (formic acid), the electrospinning of the donor together with the silk fibroin turned out to be impossible. Therefore, a multilayer structure was realized, consisting of a PLGA mat containing GYY4137 sandwiched between two silk fibroin nanofibrous layers. Before their use in the multilayer scaffold, the silk fibroin mats were treated in ethanol to induce crystalline phase formation, which conferred water-resistance and biomimetic properties. The morphological, thermal, and chemical properties of the obtained scaffolds were thoroughly characterized by SEM, TGA, DSC, FTIR, and WAXD. Multilayer devices showing two different concentrations of the H2 S donor, i.e., 2 and 5% w/w with respect to the weight of PLGA, were analyzed to study their H2 S release and biological properties, and the results were compared with those of the sample not containing GYY4137. The H2 S release analysis was carried out according to an "ad-hoc" designed procedure based on a validated high-performance liquid chromatography method. The proposed analytical approach demonstrated the slow-release kinetics of H2 S from the multilayer scaffolds and its tunability by acting on the donor's concentration inside the PLGA nanofibers. Finally, the devices were tested in biological assays using bone marrow-derived mesenchymal stromal cells showing the capacity to support cell spreading throughout the scaffold and prevent cytotoxicity effects in serum starvation conditions. The resulting devices can be exploited for applications in the tissue engineering field since they combine the advantages of controlled H2 S release kinetics and the biomimetic properties of silk fibroin nanofibers.- Published
- 2023
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30. Native Study of the Behaviour of Magnetite Nanoparticles for Hyperthermia Treatment during the Initial Moments of Intravenous Administration.
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Marassi V, Zanoni I, Ortelli S, Giordani S, Reschiglian P, Roda B, Zattoni A, Ravagli C, Cappiello L, Baldi G, Costa AL, and Blosi M
- Abstract
Magnetic nanoparticles (MNPs) present outstanding properties making them suitable as therapeutic agents for hyperthermia treatments. Since the main safety concerns of MNPs are represented by their inherent instability in a biological medium, strategies to both achieve long-term stability and monitor hazardous MNP degradation are needed. We combined a dynamic approach relying on flow field flow fractionation (FFF)-multidetection with conventional techniques to explore frame-by-frame changes of MNPs injected in simulated biological medium, hypothesize the interaction mechanism they are subject to when surrounded by a saline, protein-rich environment, and understand their behaviour at the most critical point of intravenous administration. In the first moments of MNPs administration in the patient, MNPs change their surrounding from a favorable to an unfavorable medium, i.e., a complex biological fluid such as blood; the particles evolve from a synthetic identity to a biological identity, a transition that needs to be carefully monitored. The dynamic approach presented herein represents an optimal alternative to conventional batch techniques that can monitor only size, shape, surface charge, and aggregation phenomena as an averaged information, given that they cannot resolve different populations present in the sample and cannot give accurate information about the evolution or temporary instability of MNPs. The designed FFF method equipped with a multidetection system enabled the separation of the particle populations providing selective information on their morphological evolution and on nanoparticle-proteins interaction in the very first steps of infusion. Results showed that in a dynamic biological setting and following interaction with serum albumin, PP-MNPs retain their colloidal properties, supporting their safety profile for intravenous administration.
- Published
- 2022
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31. The Challenges of O 2 Detection in Biological Fluids: Classical Methods and Translation to Clinical Applications.
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Marassi V, Giordani S, Kurevija A, Panetta E, Roda B, Zhang N, Azzolini A, Dolzani S, Manko D, Reschiglian P, Atti M, and Zattoni A
- Subjects
- Humans, Oxygen, Oxygen Consumption physiology
- Abstract
Dissolved oxygen (DO) is deeply involved in preserving the life of cellular tissues and human beings due to its key role in cellular metabolism: its alterations may reflect important pathophysiological conditions. DO levels are measured to identify pathological conditions, explain pathophysiological mechanisms, and monitor the efficacy of therapeutic approaches. This is particularly relevant when the measurements are performed in vivo but also in contexts where a variety of biological and synthetic media are used, such as ex vivo organ perfusion. A reliable measurement of medium oxygenation ensures a high-quality process. It is crucial to provide a high-accuracy, real-time method for DO quantification, which could be robust towards different medium compositions and temperatures. In fact, biological fluids and synthetic clinical fluids represent a challenging environment where DO interacts with various compounds and can change continuously and dynamically, and further precaution is needed to obtain reliable results. This study aims to present and discuss the main oxygen detection and quantification methods, focusing on the technical needs for their translation to clinical practice. Firstly, we resumed all the main methodologies and advancements concerning dissolved oxygen determination. After identifying the main groups of all the available techniques for DO sensing based on their mechanisms and applicability, we focused on transferring the most promising approaches to a clinical in vivo/ex vivo setting.
- Published
- 2022
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32. A Green Analytical Method Combined with Chemometrics for Traceability of Tomato Sauce Based on Colloidal and Volatile Fingerprinting.
- Author
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Zappi A, Marassi V, Kassouf N, Giordani S, Pasqualucci G, Garbini D, Roda B, Zattoni A, Reschiglian P, and Melucci D
- Subjects
- Chemometrics, Gas Chromatography-Mass Spectrometry methods, Principal Component Analysis, Solanum lycopersicum, Volatile Organic Compounds analysis
- Abstract
Tomato sauce is a world famous food product. Despite standards regulating the production of tomato derivatives, the market suffers frpm fraud such as product adulteration, origin mislabelling and counterfeiting. Methods suitable to discriminate the geographical origin of food samples and identify counterfeits are required. Chemometric approaches offer valuable information: data on tomato sauce is usually obtained through chromatography (HPLC and GC) coupled to mass spectrometry, which requires chemical pretreatment and the use of organic solvents. In this paper, a faster, cheaper, and greener analytical procedure has been developed for the analysis of volatile organic compounds (VOCs) and the colloidal fraction via multivariate statistical analysis. Tomato sauce VOCs were analysed by GC coupled to flame ionisation (GC-FID) and to ion mobility spectrometry (GC-IMS). Instead of using HPLC, the colloidal fraction was analysed by asymmetric flow field-fractionation (AF4), which was applied to this kind of sample for the first time. The GC and AF4 data showed promising perspectives in food-quality control: the AF4 method yielded comparable or better results than GC-IMS and offered complementary information. The ability to work in saline conditions with easy pretreatment and no chemical waste is a significant advantage compared to environmentally heavy techniques. The method presented here should therefore be taken into consideration when designing chemometric approaches which encompass a large number of samples.
- Published
- 2022
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33. Application of Af4-Multidetection to Liraglutide in Its Formulation: Preserving and Representing Native Aggregation.
- Author
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Marassi V, Macis M, Giordani S, Ferrazzano L, Tolomelli A, Roda B, Zattoni A, Ricci A, Reschiglian P, and Cabri W
- Subjects
- Fractionation, Field Flow methods, Liraglutide
- Abstract
Aggregation is among the most critical parameters affecting the pharmacological and safety profile of peptide Active Pharmaceutical Ingredients (APIs). For this reason, it is of utmost importance to define the exact aggregation state of peptide drugs, particularly when the API is marketed as a ready-to-use solution. Consequently, appropriate non-destructive techniques able to replicate the peptide environment must be employed. In our work, we exploited Asymmetrical Flow Field-Flow Fractionation (AF4), connected to UV, dRI, fluorescence, and MALS detectors, to fully characterize the aggregation state of Liraglutide, a peptide API used for the treatment of diabetes type 2 and chronic obesity. In previous studies, Liraglutide was hypothesized to assemble into hexa-octamers in phosphate buffer, but no information on its behavior in the formulation medium was provided up to now. The method used allowed researchers to work using formulation as the mobile phase with excellent recoveries and LoQ/LoD, discerning between stable and degraded samples, and detecting, when present, aggregates up to 10
8 Da. The native state of Liraglutide was assessed and found to be an association into pentamers, with a non-spherical conformation. Combined to benchmark analyses, the sameness study was complete and descriptive, also giving insight on the aggregation process and covalent/non-covalent aggregate types.- Published
- 2022
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34. FFF-based high-throughput sequence shortlisting to support the development of aptamer-based analytical strategies.
- Author
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Marassi V, Mattarozzi M, Toma L, Giordani S, Ronda L, Roda B, Zattoni A, Reschiglian P, and Careri M
- Subjects
- Ligands, Protein Binding, Aptamers, Nucleotide metabolism, SELEX Aptamer Technique methods
- Abstract
Aptamers are biomimetic receptors that are increasingly exploited for the development of optical and electrochemical aptasensors. They are selected in vitro by the SELEX (Systematic Evolution of Ligands by Exponential Enrichment) procedure, but although they are promising recognition elements, for their reliable applicability for analytical purposes, one cannot ignore sample components that cause matrix effects. This particularly applies when different SELEX-selected aptamers and related truncated sequences are available for a certain target, and the choice of the aptamer should be driven by the specific downstream application. In this context, the present work aimed at investigating the potentialities of asymmetrical flow field-flow fractionation (AF4) with UV detection for the development of a screening method of a large number of anti-lysozyme aptamers towards lysozyme, including randomized sequences and an interfering agent (serum albumin). The possibility to work in native conditions and selectively monitor the evolution of untagged aptamer signal as a result of aptamer-protein binding makes the devised method effective as a strategy for shortlisting the most promising aptamers both in terms of affinity and in terms of selectivity, to support subsequent development of aptamer-based analytical devices., (© 2022. The Author(s).)
- Published
- 2022
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35. Optimization of a Monobromobimane (MBB) Derivatization and RP-HPLC-FLD Detection Method for Sulfur Species Measurement in Human Serum after Sulfur Inhalation Treatment.
- Author
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Roda B, Zhang N, Gambari L, Grigolo B, Eller-Vainicher C, Gennari L, Zappi A, Giordani S, Marassi V, Zattoni A, Reschiglian P, and Grassi F
- Abstract
(1) Background: Hydrogen sulfide (H
2 S) is a widely recognized gasotransmitter, with key roles in physiological and pathological processes. The accurate quantification of H2 S and reactive sulfur species (RSS) may hold important implications for the diagnosis and prognosis of diseases. However, H2 S species quantification in biological matrices is still a challenge. Among the sulfide detection methods, monobromobimane (MBB) derivatization coupled with reversed phase high-performance liquid chromatography (RP-HPLC) is one of the most reported. However, it is characterized by a complex preparation and time-consuming process, which may alter the actual H2 S level; moreover, a quantitative validation has still not been described. (2) Methods: We developed and validated an improved analytical protocol for the MBB RP-HPLC method. MBB concentration, temperature and sample handling were optimized, and the calibration method was validated using leave-one-out cross-validation and tested in a clinical setting. (3) Results: The method shows high sensitivity and allows the quantification of H2 S species, with a limit of detection of 0.5 µM. Finally, it can be successfully applied in measurements of H2 S levels in the serum of patients subjected to inhalation with vapors rich in H2 S. (4) Conclusions: These data demonstrate that the proposed method is precise and reliable for measuring H2 S species in biological matrices and can be used to provide key insights into the etiopathogenesis of several diseases and sulfur-based treatments.- Published
- 2022
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36. Synthesis Monitoring, Characterization and Cleanup of Ag-Polydopamine Nanoparticles Used as Antibacterial Agents with Field-Flow Fractionation.
- Author
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Marassi V, Casolari S, Panzavolta S, Bonvicini F, Gentilomi GA, Giordani S, Zattoni A, Reschiglian P, and Roda B
- Abstract
Advances in nanotechnology have opened up new horizons in nanomedicine through the synthesis of new composite nanomaterials able to tackle the growing drug resistance in bacterial strains. Among these, nanosilver antimicrobials sow promise for use in the treatment of bacterial infections. The use of polydopamine (PDA) as a biocompatible carrier for nanosilver is appealing; however, the synthesis and functionalization steps used to obtain Ag-PDA nanoparticles (NPs) are complex and require time-consuming cleanup processes. Post-synthesis treatment can also hinder the stability and applicability of the material, and dry, offline characterization is time-consuming and unrepresentative of real conditions. The optimization of Ag-PDA preparation and purification together with well-defined characterization are fundamental goals for the safe development of these new nanomaterials. In this paper, we show the use of field-flow fractionation with multi-angle light scattering and spectrophotometric detection to improve the synthesis and quality control of the production of Ag-PDA NPs. An ad hoc method was able to monitor particle growth in a TLC-like fashion; characterize the species obtained; and provide purified, isolated Ag-PDA nanoparticles, which proved to be biologically active as antibacterial agents, while achieving a short analysis time and being based on the use of green, cost-effective carriers such as water.
- Published
- 2022
- Full Text
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37. An ultracentrifugation - hollow-fiber flow field-flow fractionation orthogonal approach for the purification and mapping of extracellular vesicle subtypes.
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Marassi V, Maggio S, Battistelli M, Stocchi V, Zattoni A, Reschiglian P, Guescini M, and Roda B
- Subjects
- Animals, Chemistry Techniques, Analytical instrumentation, DNA analysis, Mice, Proteins analysis, Chemistry Techniques, Analytical methods, Extracellular Vesicles chemistry, Fractionation, Field Flow, Ultracentrifugation
- Abstract
In the course of their life span, cells release a multitude of different vesicles in the extracellular matrix (EVs), constitutively and/or upon stimulation, carrying signals either inside or on their membrane for intercellular communication. As a natural delivery tool, EVs present many desirable advantages, such as biocompatibility and low toxicity. However, due to the complex biogenesis of EVs and their high heterogeneity in size distribution and composition, the characterization and quantification of EVs and their subpopulations still represents an enticing analytical challenge. Centrifugation methods allow to obtain different subpopulations in an easy way from cell culture conditioned medium and biological fluids including plasma, amniotic fluid and urine, but they still present some drawbacks and limitations. An unsatisfactory isolation can limit their downstream analysis and lead to wrong conclusions regarding biological activities. Isolation and characterization of biologically relevant nanoparticles like EVs is crucial to investigate specific molecular and signaling patterns and requires new combined approaches. Our work was focused on HF5 (miniaturized, hollow-fiber flow field-flow fractionation), and its hyphenation to ultracentrifugation techniques, which are the most assessed techniques for vesicle isolation. We exploited model samples obtained from culture medium of murine myoblasts (C2C12), known to release different subsets of membrane-derived vesicles. Large and small EVs (LEVs and SEVs) were isolated by differential ultracentrifugation (UC). Through an HF5 method employing UV, fluorescence and multi-angle laser scattering as detectors, we characterized these subpopulations in terms of size, abundance and DNA/protein content; moreover, we showed that microvesicles tend to hyper-aggregate and partially release nucleic matter. The quali-quantitative information we obtained from the fractographic profiles was improved with respect to Nano Tracking Analysis (NTA) estimation. The SEV population was then further separated using density gradient centrifugation (DGC), and four fractions were submitted again to HF5-multidetection. This technique is based on a fully orthogonal principle, since F4 does not separate by density, and provided uncorrelated information for each of the fractions processed. The "second dimension" achieved with HF5 showed good promise in sorting particles with both different size and content, and allowed to identify the presence of fibrilloid nucleic matter. This analytical bidimensional approach proved to be effective for the characterization of highly complex biological samples such as mixtures of EVs and could provide purified fractions for further biological characterization., Competing Interests: Declaration of Competing Interest Valentina Marassi, Andrea Zattoni, Pierluigi Reschiglian and Barbara Roda are associates of the academic spinoff company byFlow Srl (Bologna, Italy). The company mission includes know-how transfer, development, and application of novel technologies and methodologies for the analysis and characterization of samples of nano-biotechnological interest., (Copyright © 2020. Published by Elsevier B.V.)
- Published
- 2021
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38. Perspectives on protein biopolymers: miniaturized flow field-flow fractionation-assisted characterization of a single-cysteine mutated phaseolin expressed in transplastomic tobacco plants.
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Marassi V, De Marchis F, Roda B, Bellucci M, Capecchi A, Reschiglian P, Pompa A, and Zattoni A
- Subjects
- Fractionation, Field Flow methods, Light, Molecular Weight, Transcriptome, Biopolymers chemistry, Cysteine analysis, Fabaceae chemistry, Miniaturization, Plant Proteins chemistry, Nicotiana genetics
- Abstract
The development of plant-based protein polymers to employ in biofilm production represents the promising intersection between material science and sustainability, and allows to obtain biodegradable materials that also possess excellent physicochemical properties. A possible candidate for protein biopolymer production is phaseolin, a storage protein highly abundant in P Vulgaris beans. We previously showed that transformed tobacco chloroplasts could be employed to express a mutated phaseolin carrying a signal peptide (directing it into the thylakoids) also enriched of a cysteine residue added to its C-terminal region. This modification allows for the formation of inter-chain disulfide bonds, as we previously demonstrated, and should promote polymerization. To verify the effect of the peptide modification and to quantify polymer formation, we employed hollow-fiber flow field-flow fractionation coupled to UV and multi-angle laser scattering detection (HF5-UV-MALS): HF5 allows for the selective size-based separation of phaseolin species, whereas MALS calculates molar mass and conformation state of each population. With the use of two different HF5 separation methods we first observed the native state of P.Vulgaris phaseolin, mainly assembled into trimers, and compared it to mutated phaseolin (P*) which instead resulted highly aggregated. Then we further characterized P* using a second separation method, discriminating between two and distinct high-molecular weight (HMW) species, one averaging 0.8 × 10
6 Da and the second reaching the tens of million Da. Insight on the conformation of these HMW species was offered from their conformation plots, which confirmed the positive impact of the Cys modification on polymerization., Competing Interests: Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests., (Copyright © 2020. Published by Elsevier B.V.)- Published
- 2021
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39. Comprehensive characterization of gold nanoparticles and their protein conjugates used as a label by hollow fiber flow field flow fractionation with photodiode array and fluorescence detectors and multiangle light scattering.
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Marassi V, Calabria D, Trozzi I, Zattoni A, Reschiglian P, and Roda B
- Subjects
- Animals, Fluorescein chemistry, Mice, Spectrophotometry, Surface Plasmon Resonance, Antibodies chemistry, Fractionation, Field Flow methods, Gold chemistry, Immunoglobulin G chemistry, Metal Nanoparticles chemistry
- Abstract
Most of lateral flow immunoassay (LFIA) devices rely on gold nanoparticles (GNP) labeled antibodies or other biospecific proteins, to achieve reagent-less color-based detection. GNP size, GNP-protein conjugation level and its stability are crucial points for the development of precise and accurate methods. In addition, the purification of the GNP-protein conjugates from unreacted protein and GNP, is necessary for adequate analytical performance of the assay. To assist the synthesis and production process of GNP and their protein conjugates, we use for the first time a non-destructive, particle separation-multi-detection approach based on miniaturized flow field flow fractionation (HF5). A separation method was developed to baseline size-separate GNP, GNP-protein, protein and GNP including BSA used as a surface coater in less than 30 minutes. Freshly synthesized GNP were first characterized and then conjugated with two different model antibodies: a mouse immunoglobulin (IgG) and a fluorescein-labeled mouse immunoglobulin (FITC-IgG). The IgG-GNP complexes were fractionated using the HF5 apparatus, able to separate IgG-GNP from free proteins by their hydrodynamic size, allowing purification of the conjugation product. Both IgG-GNPs and GNPs were characterized according to their size by the MALS detector, and according to their Surface Plasmon Resonance and spectrum by UV-Vis detection, improving the results obtained via batch characterization. This simple non-invasive approach is very useful for the LFIA development and optimization: the use of HF5-mutidetection offers a unique tool for this purpose facilitating the industrialization of the process and the relate optimization and standardization., Competing Interests: Declaration of Competing Interest Valentina Marassi, Andrea Zattoni, Pierluigi Reschiglian and Barbara Roda are associates of the academic spinoff company byFlow Srl (Bologna, Italy). The company mission includes know-how transfer, development, and application of novel technologies and methodologies for the analysis and characterization of samples of nano-biotechnological interest., (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Published
- 2021
- Full Text
- View/download PDF
40. A new approach for the separation, characterization and testing of potential prionoid protein aggregates through hollow-fiber flow field-flow fractionation and multi-angle light scattering.
- Author
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Marassi V, Beretti F, Roda B, Alessandrini A, Facci P, Maraldi T, Zattoni A, Reschiglian P, and Portolani M
- Subjects
- Amyloidogenic Proteins isolation & purification, Amyloidogenic Proteins toxicity, Cell Line, Tumor, Chromatography, Ion Exchange, Fractionation, Field Flow, Humans, Light, Microscopy, Atomic Force, Particle Size, Prions isolation & purification, Prions toxicity, Scattering, Radiation, Amyloidogenic Proteins analysis, Prions analysis, Protein Aggregates
- Abstract
Protein misfolding and aggregation are the common mechanisms in a variety of aggregation-dependent diseases. The compromised proteins often assemble into toxic, accumulating amyloid-like structures of various lengths and their toxicity can also be transferred both in vivo and in vitro a prion-like behavior. The characterization of protein interactions, degradation and conformational dynamics in biological systems still represents an analytical challenge in the prion-like protein comprehension. In our work, we investigated the nature of a transferable cytotoxic agent, presumably a misfolded protein, through the coupling of a multi-detector, non-destructive separation platform based on hollow-fiber flow field-flow fractionation with imaging and downstream in vitro tests. After purification with ion exchange chromatography, the transferable cytotoxic agentwas analyzed with Atomic Force Microscopy and statistical analysis, showing that the concentration of protein dimers and low n-oligomer forms was higher in the cytotoxic sample than in the control preparation. To assess whether the presence of these species was the actual toxic and/or self-propagating factor, we employed HF5 fractionation, with UV and Multi-Angle Light Scattering detection, to define proteins molar mass distribution and abundance, and fractionate the sample into size-homogeneous fractions. These fractions were then tested individually in vitro to investigate the direct correlation with cytotoxicity. Only the later-eluted fraction, which contains high-molar mass aggregates, proved to be toxic onto cell cultures. Moreover, it was observed that the selective transfer of toxicity also occurs for one lower-mass fraction, suggesting that two different mechanisms, acute and later induced toxicity, are in place. These results strongly encourage the efficacy of this platform to enable the identification of protein toxicants., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2019
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41. Widening the Therapeutic Perspectives of Clofazimine by Its Loading in Sulfobutylether β-Cyclodextrin Nanocarriers: Nanomolar IC 50 Values against MDR S. epidermidis.
- Author
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Wankar J, Bonvicini F, Benkovics G, Marassi V, Malanga M, Fenyvesi E, Gentilomi GA, Reschiglian P, Roda B, and Manet I
- Subjects
- Drug Resistance, Bacterial, Drug Resistance, Multiple, Bacterial, Molecular Weight, Clofazimine chemistry, Clofazimine pharmacology, Drug Carriers chemistry, Nanoparticles chemistry, Staphylococcus epidermidis drug effects, beta-Cyclodextrins chemistry
- Abstract
Clofazimine (CLZ) is an antibiotic with a promising behavior against Gram-positive bacteria; however, the drug is completely insoluble in water and accumulates in fat tissues. We explored nanocarriers, labeled and not labeled with rhodamine, consisting of negatively charged sulfobutylether-β-cyclodextrins for CLZ loading. A new oligomeric carrier was obtained cross-linking βCyD with epichlorohydrin followed by sulfonation in a strongly alkaline aqueous medium. The oligomeric carrier has a MW of 53 kDa and forms small nanoparticles of a few tens of nm. With aqueous solutions containing a 25 mg/mL oligomeric carrier, we loaded up to 0.5 mg/mL of drug. The oligomers exhibited a 10-fold better loading capacity compared to monomers and formed nanoparticles with a size in the 20-60 nm range after drug loading. Circular dichroism confirmed encapsulation of the CLZ in the nanocarriers. All carriers with or without CLZ are not cytotoxic up to 1 μM, while CLZ alone is highly cytotoxic at the same concentration. The drug has IC
50 values below 100 nM against S. epidermidis. The same holds true also for clinical isolates of S. epidermidis, some displaying MDR. So, the selectivity index significantly increased for CLZ/carrier systems compared to the drug alone. Taken all together, our results open new avenues for the clinical application of this antibiotic.- Published
- 2018
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42. Flow field-flow fractionation and multi-angle light scattering as a powerful tool for the characterization and stability evaluation of drug-loaded metal-organic framework nanoparticles.
- Author
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Roda B, Marassi V, Zattoni A, Borghi F, Anand R, Agostoni V, Gref R, Reschiglian P, and Monti S
- Subjects
- Anti-HIV Agents chemistry, Antimetabolites administration & dosage, Antimetabolites chemistry, Dideoxynucleotides administration & dosage, Dideoxynucleotides chemistry, Dynamic Light Scattering, Fractionation, Field Flow, Models, Molecular, Particle Size, Refractometry, Spectrophotometry, Ultraviolet, Thymine Nucleotides administration & dosage, Thymine Nucleotides chemistry, Zidovudine analogs & derivatives, Zidovudine chemistry, Anti-HIV Agents administration & dosage, Coordination Complexes chemistry, Drug Carriers chemistry, Metal-Organic Frameworks chemistry, Nanoparticles chemistry, Zidovudine administration & dosage
- Abstract
Asymmetric flow field-flow fractionation (AF4) coupled with UV-Vis spectroscopy, multi-angle light scattering (MALS) and refractive index (RI) detection has been applied for the characterization of MIL-100(Fe) nanoMOFs (metal-organic frameworks) loaded with nucleoside reverse transcriptase inhibitor (NRTI) drugs for the first time. Empty nanoMOFs and nanoMOFs loaded with azidothymidine derivatives with three different degrees of phosphorylation were examined: azidothymidine (AZT, native drug), azidothymidine monophosphate (AZT-MP), and azidothymidine triphosphate (AZT-TP). The particle size distribution and the stability of the nanoparticles when interacting with drugs have been determined in a time frame of 24 h. Main achievements include detection of aggregate formation in an early stage and monitoring nanoMOF morphological changes as indicators of their interaction with guest molecules. AF4-MALS proved to be a useful methodology to analyze nanoparticles engineered for drug delivery applications and gave fundamental data on their size distribution and stability. Graphical abstract ᅟ.
- Published
- 2018
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43. Silver nanoparticles as a medical device in healthcare settings: a five-step approach for candidate screening of coating agents.
- Author
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Marassi V, Di Cristo L, Smith SGJ, Ortelli S, Blosi M, Costa AL, Reschiglian P, Volkov Y, and Prina-Mello A
- Abstract
Silver nanoparticle-based antimicrobials can promote a long lasting bactericidal effect without detrimental toxic side effects. However, there is not a clear and complete protocol to define and relate the properties of the particles (size, shape, surface charge, ionic content) with their specific activity. In this paper, we propose an effective multi-step approach for the identification of a 'purpose-specific active applicability window' to maximize the antimicrobial activity of medical devices containing silver nanoparticles (Ag NPs) (such as surface coaters), minimizing any consequent risk for human health (safety by design strategy). The antimicrobial activity and the cellular toxicity of four types of Ag NPs, differing in their coating composition and concentration have been quantified. Through the implementation of flow-field flow fractionation, Ag NPs have been characterized in terms of metal release, size and shape. The particles are fractionated in the process while being left unmodified, allowing for the identification of biological particle-specific contribution. Toxicity and inflammatory response in vitro have been assessed on human skin models, while antimicrobial activity has been monitored with both non-pathogenic and pathogenic Escherichia coli . The main benefit associated with such approach is the comprehensive assessment of the maximal effectiveness of candidate nanomaterials, while simultaneously indexing their properties against their safety., Competing Interests: The authors declare that they have no competing interests.
- Published
- 2018
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44. Hollow-fiber flow field-flow fractionation and multi-angle light scattering investigation of the size, shape and metal-release of silver nanoparticles in aqueous medium for nano-risk assessment.
- Author
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Marassi V, Casolari S, Roda B, Zattoni A, Reschiglian P, Panzavolta S, Tofail SA, Ortelli S, Delpivo C, Blosi M, and Costa AL
- Subjects
- Chemical Fractionation methods, Feasibility Studies, Filtration methods, Light, Particle Size, Risk Assessment methods, Water chemistry, Metal Nanoparticles chemistry, Scattering, Radiation, Silver chemistry
- Abstract
Due to the increased use of silver nanoparticles in industrial scale manufacturing, consumer products and nanomedicine reliable measurements of properties such as the size, shape and distribution of these nano particles in aqueous medium is critical. These properties indeed affect both functional properties and biological impacts especially in quantifying associated risks and identifying suitable risk-mediation strategies. The feasibility of on-line coupling of a fractionation technique such as hollow-fiber flow field flow fractionation (HF5) with a light scattering technique such as MALS (multi-angle light scattering) is investigated here for this purpose. Data obtained from such a fractionation technique and its combination thereof with MALS have been compared with those from more conventional but often complementary techniques e.g. transmission electron microscopy, dynamic light scattering, atomic absorption spectroscopy, and X-ray fluorescence. The combination of fractionation and multi angle light scattering techniques have been found to offer an ideal, hyphenated methodology for a simultaneous size-separation and characterization of silver nanoparticles. The hydrodynamic radii determined by fractionation techniques can be conveniently correlated to the mean average diameters determined by multi angle light scattering and reliable information on particle morphology in aqueous dispersion has been obtained. The ability to separate silver (Ag(+)) ions from silver nanoparticles (AgNPs) via membrane filtration during size analysis is an added advantage in obtaining quantitative insights to its risk potential. Most importantly, the methodology developed in this article can potentially be extended to similar characterization of metal-based nanoparticles when studying their functional effectiveness and hazard potential., (Copyright © 2014 Elsevier B.V. All rights reserved.)
- Published
- 2015
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45. Flow field-flow fractionation for the analysis of nanoparticles used in drug delivery.
- Author
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Zattoni A, Roda B, Borghi F, Marassi V, and Reschiglian P
- Subjects
- Animals, Chromatography, Gel, Humans, Light, Microscopy, Electron, Transmission, Nanotechnology, Particle Size, Scattering, Radiation, Drug Delivery Systems, Fractionation, Field Flow methods, Nanoparticles
- Abstract
Structured nanoparticles (NPs) with controlled size distribution and novel physicochemical features present fundamental advantages as drug delivery systems with respect to bulk drugs. NPs can transport and release drugs to target sites with high efficiency and limited side effects. Regulatory institutions such as the US Food and Drug Administration (FDA) and the European Commission have pointed out that major limitations to the real application of current nanotechnology lie in the lack of homogeneous, pure and well-characterized NPs, also because of the lack of well-assessed, robust routine methods for their quality control and characterization. Many properties of NPs are size-dependent, thus the particle size distribution (PSD) plays a fundamental role in determining the NP properties. At present, scanning and transmission electron microscopy (SEM, TEM) are among the most used techniques to size characterize NPs. Size-exclusion chromatography (SEC) is also applied to the size separation of complex NP samples. SEC selectivity is, however, quite limited for very large molar mass analytes such as NPs, and interactions with the stationary phase can alter NP morphology. Flow field-flow fractionation (F4) is increasingly used as a mature separation method to size sort and characterize NPs in native conditions. Moreover, the hyphenation with light scattering (LS) methods can enhance the accuracy of size analysis of complex samples. In this paper, the applications of F4-LS to NP analysis used as drug delivery systems for their size analysis, and the study of stability and drug release effects are reviewed., (Copyright © 2013 Elsevier B.V. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
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