87 results on '"Malic S"'
Search Results
2. Rapid screening of the antimicrobial efficacy of Ag zeolites
- Author
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Tosheva, L., Belkhair, S., Gackowski, M., Malic, S., Al-Shanti, N., and Verran, J.
- Published
- 2017
- Full Text
- View/download PDF
3. The denture microbiome in health and disease: an exploration of a unique community
- Author
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Redfern, J., primary, Tosheva, L., additional, Malic, S., additional, Butcher, M., additional, Ramage, G., additional, and Verran, J., additional
- Published
- 2022
- Full Text
- View/download PDF
4. The denture microbiome in health and disease: an exploration of a unique community
- Author
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Redfern, J, Tosheva, L, Malic, S, Butcher, M, Ramage, G, Verran, J, Redfern, J, Tosheva, L, Malic, S, Butcher, M, Ramage, G, and Verran, J
- Abstract
The United Nations suggests the global population of denture wearers (an artificial device that acts as a replacement for teeth) is likely to rise significantly by the year 2050. Dentures become colonized by microbial biofilms, the composition of which is influenced by complex factors such as patient’s age and health, and the nature of the denture material. Since colonization (and subsequent biofilm formation) by some micro-organisms can significantly impact the health of the denture wearer, the study of denture microbiology has long been of interest to researchers. The specific local and systemic health risks of denture plaque are different from those of dental plaque, particularly with respect to the presence of the opportunist pathogen Candida albicans and various other nonoral opportunists. Here, we reflect on advancements in our understanding of the relationship between micro-organisms, dentures, and the host, and highlight how our growing knowledge of the microbiome, biofilms, and novel antimicrobial technologies may better inform diagnosis, treatment, and prevention of denture-associated infections, thereby enhancing the quality and longevity of denture wearers.
- Published
- 2022
5. Phenotypic and Genotypic Characterization of Novel Polyvalent Bacteriophages With Potent In Vitro Activity Against an International Collection of Genetically Diverse Staphylococcus aureus
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Whittard, E, Redfern, J, Xia, G, Millard, A, Ragupathy, R, Malic, S, Enright, MC, Whittard, E, Redfern, J, Xia, G, Millard, A, Ragupathy, R, Malic, S, and Enright, MC
- Abstract
Phage therapy recently passed a key milestone with success of the first regulated clinical trial using systemic administration. In this single-arm non-comparative safety study, phages were administered intravenously to patients with invasive Staphylococcus aureus infections with no adverse reactions reported. Here, we examined features of 78 lytic S. aureus phages, most of which were propagated using a S. carnosus host modified to be broadly susceptible to staphylococcal phage infection. Use of this host eliminates the threat of contamination with staphylococcal prophage — the main vector of S. aureus horizontal gene transfer. We determined the host range of these phages against an international collection of 185 S. aureus isolates with 56 different multilocus sequence types that included multiple representatives of all epidemic MRSA and MSSA clonal complexes. Forty of our 78 phages were able to infect > 90% of study isolates, 15 were able to infect > 95%, and two could infect all 184 clinical isolates, but not a phage-resistant mutant generated in a previous study. We selected the 10 phages with the widest host range for in vitro characterization by planktonic culture time-kill analysis against four isolates:- modified S. carnosus strain TM300H, methicillin-sensitive isolates D329 and 15981, and MRSA isolate 252. Six of these 10 phages were able to rapidly kill, reducing cell numbers of at least three isolates. The four best-performing phages, in this assay, were further shown to be highly effective in reducing 48 h biofilms on polystyrene formed by eight ST22 and eight ST36 MRSA isolates. Genomes of 22 of the widest host-range phages showed they belonged to the Twortvirinae subfamily of the order Caudovirales in three main groups corresponding to Silviavirus, and two distinct groups of Kayvirus. These genomes assembled as single-linear dsDNAs with an average length of 140 kb and a GC content of c. 30%. Phages that could infect > 96% of S. aureus isolates were foun
- Published
- 2021
6. Methylcellulose hydrogel with Melissa officinalis essential oil as a treatment of oral candidosis
- Author
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Serra, E, Saubade, Fabien, Ligorio, C, Whitehead, Kathryn, Sloan, A, Williams, David, Hidalgo-Bastida, A, Verran, J, and Malic, S
- Abstract
Candida spp. are the most prevalent fungi of the human microbiota and are opportunistic pathogens that can cause oral candidiasis. Management of such infections is limited due to the low number of antifungal drugs available, their relatively high toxicity and the emergence of antifungal resistance. Therefore, much interest in the antimicrobial potential of natural compounds has recently been evident. The use of hydrogels in the delivery of biocides has been explored due to their biocompatibility, ease with drug encapsulation, and due to their potential to confer mechanical and structural properties similar to biological tissue. Methylcellulose hydrogels (10% (w/v)) with 1% (v/v) and 2% (v/v) Melissa officinalis oil were synthesised. The rheological properties and gelation time of the hydrogels were evaluated. Antimicrobial action, the antifungal potential and ability to displace Candida were determined. Rheological tests revealed that the hydrogel jellified in three minutes at 37 °C. Loaded hydrogels successfully inhibited Candida albicans growth as evident by zone of inhibition and time-kill assays. A significant reduction in retained C. albicans was demonstrated with the hydrogel at 2% Melissa officinalis concentration. This work demonstrated that an essential oil-loaded hydrogel had the potential to provide a novel antimicrobial therapy for the treatment of oral candidiasis.
- Published
- 2020
7. Methylcellulose Hydrogel with Melissa officinalis Essential Oil as a Potential Treatment for Oral Candidiasis
- Author
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Serra, E, Saubade, F, Ligorio, C, Whitehead, K, Sloan, A, Williams, DW, Hidalgo-Bastida, A, Verran, J, Malic, S, Serra, E, Saubade, F, Ligorio, C, Whitehead, K, Sloan, A, Williams, DW, Hidalgo-Bastida, A, Verran, J, and Malic, S
- Abstract
Candida spp. are the most prevalent fungi of the human microbiota and are opportunistic pathogens that can cause oral candidiasis. Management of such infections is limited due to the low number of antifungal drugs available, their relatively high toxicity and the emergence of antifungal resistance. Therefore, much interest in the antimicrobial potential of natural compounds has recently been evident. The use of hydrogels in the delivery of biocides has been explored due to their biocompatibility, ease with drug encapsulation, and due to their potential to confer mechanical and structural properties similar to biological tissue. Methylcellulose hydrogels (10% (w/v)) with 1% (v/v) and 2% (v/v) Melissa officinalis oil were synthesised. The rheological properties and gelation time of the hydrogels were evaluated. Antimicrobial action, the antifungal potential and ability to displace Candida were determined. Rheological tests revealed that the hydrogel jellified in three minutes at 37 °C. Loaded hydrogels successfully inhibited Candida albicans growth as evident by zone of inhibition and time-kill assays. A significant reduction in retained C. albicans was demonstrated with the hydrogel at 2% Melissa officinalis concentration. This work demonstrated that an essential oil-loaded hydrogel had the potential to provide a novel antimicrobial therapy for the treatment of oral candidiasis.
- Published
- 2020
8. Characterization of Candida albicans infection of an in vitro oral epithelial model using confocal laser scanning microscopy
- Author
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Malic, S., Hill, K. E., Ralphs, J. R., Hayes, A., Thomas, D. W., Potts, A. J., and Williams, D. W.
- Published
- 2007
9. The N14 anti-afamin antibody Fab: A rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling
- Author
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Naschberger A, Bg, Fürnrohr, Lenac Rovis T, Malic S, Scheffzek K, Dieplinger H, and Bernhard Rupp
- Subjects
ANTIBODY - Abstract
The monoclonal antibody N14 is used as a detection antibody in ELISA kits for the human glycoprotein afamin, a member of the albumin family, which has recently gained interest in the capture and stabilization of Wnt signalling proteins, and for its role in metabolic syndrome and papillary thyroid carcinoma. As a rare occurrence, the N14 Fab is N-glycosylated at Asn26L at the onset of the VL1 antigen-binding loop, with the α-1–6 core fucosylated complex glycan facing out of the L1 complementarity-determining region. The crystal structures of two non-apparent (pseudo) isomorphous crystals of the N14 Fab were analyzed, which differ significantly in the elbow angles, thereby cautioning against the overinterpretation of domain movements upon antigen binding. In addition, the map quality at 1.9 Å resolution was sufficient to crystallographically re-sequence the variable VL and VH domains and to detect discrepancies in the hybridoma-derived sequence. Finally, a conservatively refined parsimonious model is presented and its statistics are compared with those from a less conservatively built model that has been modelled more enthusiastically. Improvements to the PDB validation reports affecting ligands, clashscore and buried surface calculations are suggested.
- Published
- 2016
10. Rapid screening of the antimicrobial efficacy of Ag zeolites
- Author
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Tosheva, L, Belkhair, S, Gackowski, M, Malic, S, Al-Shanti, N, Verran, J, Tosheva, L, Belkhair, S, Gackowski, M, Malic, S, Al-Shanti, N, and Verran, J
- Abstract
A semi-quantitative screening method was used to compare the killing efficacy of Ag zeolites against bacteria and yeast as a function of the zeolite type, crystal size and concentration. The method, which substantially reduced labor, consumables and waste and provided an excellent preliminary screen, was further validated by quantitative plate count experiments. Two pairs of zeolite X and zeolite beta with different sizes (ca. 200 nm and 2 m for zeolite X and ca. 250 and 500 nm for zeolite beta) were tested against Escherichia coli (E. coli) and Candida albicans (C. albicans) at concentrations in the range 0.05–0.5 mg ml−1. Reduction of the zeolite crystal size resulted in a decrease in the killing efficacy against both microorganisms. The semi-quantitative tests allowed convenient optimization of the zeolite concentrations to achieve targeted killing times. Zeolite beta samples showed higher activity compared to zeolite X despite their lower Ag content, which was attributed to the higher concentration of silver released from zeolite beta samples. Cytotoxicity measurements using peripheral blood mononuclear cells (PBMCs) indicated that Ag zeolite X was more toxic than Ag zeolite beta. However, the trends for the dependence of cytotoxicity on zeolite crystal size at different zeolite concentrations were different for the two zeolites and no general conclusions about zeolite cytotoxicity could be drawn from these experiments. This result indicates a complex relationship, requiring the necessity for individual cytotoxicity measurements for all antimicrobial applications based on the use of zeolites.
- Published
- 2017
11. Development of an antimicrobial urinary catheter to inhibit urinary catheter encrustation.
- Author
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Jordan, RPC, Malic, S, Waters, MGJ, Stickler, DJ, Williams, DW, Jordan, RPC, Malic, S, Waters, MGJ, Stickler, DJ, and Williams, DW
- Abstract
Background: Encrustation of urinary catheters is a frequent problem in patients with long-term indwelling catheters colonised with urease-positive bacteria such as Proteus mirabilis. Catheter blockage may follow catheter encrustation, potentially leading to systemic infection. Prevention of encrustation is difficult and avoidance of recurrence often unsuccessful. One possible preventative strategy is to use a catheter with an antimicrobial surface and development and assessment of such a surface was the aim of this research. Methods: Initial experiments assessed the antimicrobial activity of silicone impregnated with plant-derived antimicrobials and triclosan using agar diffusion. The longevity of activity of each antimicrobial silicone was examined over a period of 11 weeks following soaking individual pieces of antimicrobial silicone in an artificial urine solution before using agar diffusion to test remaining antimicrobial activity. Live/Dead staining of bacteria colonising the surface of each antimicrobial silicone was employed to determine the bactericidal properties of each antimicrobial silicone. Selected antimicrobial silicones were subsequently evaluated for their ability to prevent catheter encrustation in an in vitro bladder model. Results: Results showed that antimicrobial activity was obtained using 1% triclosan-impregnated silicone and that this antimicrobial activity was long-lasting (up to 11 weeks). Use of a dip coat silicone formulation, containing 0.2% triclosan, proved effective at delaying catheter encrustation with P. mirabilis metabolites in vitro. In 8 out of 13 independent experiments using dip-coated catheters, no catheter blockage occurred over 7 days, whilst all control catheters blocked during this period. Only on one occasion was delayed encrustation not evident with the treated catheters. Conclusions: In summary, a dip-coat silicone containing triclosan proved effective in preventing in vitro catheter encrustation caused by P. mirabili
- Published
- 2015
12. Novel Nystatin A1 derivatives exhibiting low host cell toxicity and antifungal activity in an in vitro model of oral candidosis
- Author
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Boros-Majewska, J, Salewska, N, Borowski, E, Milewski, S, Malic, S, Wei, XQ, Hayes, AJ, Wilson, MJ, Williams, DW, Boros-Majewska, J, Salewska, N, Borowski, E, Milewski, S, Malic, S, Wei, XQ, Hayes, AJ, Wilson, MJ, and Williams, DW
- Abstract
© 2014, Springer-Verlag Berlin Heidelberg. Opportunistic oral infections caused by Candida albicans are frequent problems in immunocompromised patients. Management of such infections is limited due to the low number of antifungal drugs available, their relatively high toxicity and the emergence of antifungal resistance. Given these issues, our investigations have focused on novel derivatives of the antifungal antibiotic Nystatin A1, generated by modifications at the amino group of this molecule. The aims of this study were to evaluate the antifungal effectiveness and host cell toxicity of these new compounds using an in vitro model of oral candidosis based on a reconstituted human oral epithelium (RHOE). Initial studies employing broth microdilution, revealed that against planktonic C. albicans, Nystatin A1had lower minimal inhibitory concentration than novel derivatives. However, Nystatin A1was also markedly more toxic against human keratinocyte cells. Interestingly, using live/dead staining to assess C.albicans and tissue cell viability after RHOE infection, Nystatin A1derivatives were more active against Candida with lower toxicity to epithelial cells than the parent drug. Lactate dehydrogenase activity released by the RHOE indicated a fourfold reduction in tissue damage when certain Nystatin derivatives were used compared with Nystatin A1. Furthermore, compared with Nystatin A1, colonisation of the oral epithelium by C. albicans was notably reduced by the new polyenes. In the absence of antifungal agents, confocal laser scanning microscopy showed that C. albicans extensively invaded the RHOE. However, the presence of the novel derivatives greatly reduced or totally prevented this fungal invasion.
- Published
- 2014
13. Biocide Activity against Urinary Catheter Pathogens
- Author
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Malic, S, Jordan, RPC, Waters, MGJ, Stickler, DJ, Williams, DW, Malic, S, Jordan, RPC, Waters, MGJ, Stickler, DJ, and Williams, DW
- Abstract
Antimicrobial effects of essential oils against bacteria associated with urinary catheter infection was assessed. Tests were performed on 14 different bacterial species cultured either planktonically or as biofilms. Biofilms were found to be up to 8-fold more tolerant of the test agents. Higher antimicrobial tolerance was also evident in tests conducted in artificial urine. Eugenol exhibited higher antimicrobial effects against both planktonic cells and biofilms than did terpinen, tea tree oil, and cineole.
- Published
- 2013
14. Antimicrobial activity of novel mouthrinses against planktonic cells and biofilms of pathogenic microorganisms
- Author
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Malic, S, Emanuel, C, Lewis, MAO, Williams, DW, Malic, S, Emanuel, C, Lewis, MAO, and Williams, DW
- Abstract
Background: Oral diseases pose major public health problems on a global scale. Such diseases have considerable impact on individuals and communities by causing pain and suffering, impairment of function and reduced quality of life. The objective of this study was to evaluate the antimicrobial activity of five mouthrinses against a variety of microorganisms associated with infections of the oral cavity and other body sites. Methods: Mouthrinse formulations were Chlorhexidine (0.2%), Citrox (1%; PerioplusTM/Hyaluronic acid (0.2%)®, Chlorhexidine (0.2%)/Citrox (1%; PerioplusTM), Chlorhexidine (0.2%)/Phenoxetol (0.1%)® and Citrox (1%; Oralclens)TM (Oraldent Ltd; UK). The test microorganisms were the bacteria, Actinomyces viscosus ATCC 1598; Actinomyces odontolyticus NCTC 9935, Clostridium difficile R8651, Prevotella intermedia NCTC 13070T, Prevotella denticola R20771, Porphyromonas gingivalis NCTC 11834T, Streptococcus gordonii ATCC 10558T, Streptococcus sanguinis NCTC 7863, and the fungi, Candida albicans ATCC 90028, Candida dubliniensis CD36, Candida krusei ATCC 6258, Candida glabrata ATCC 2001, Candida tropicalis ATCC 750 and Candida parapsilosis ATCC 22019. Determination of mouthwash antifungal and antibacterial properties was done using a microtitre plate assay. In vitro biofilms were constructed using 96-well plates and exposed to a range of mouthrinse concentrations. The minimum biofilm eradication concentration (MBEC) was established by examining subsequent re-growth of biofilm cells. Results were compared with the minimum inhibitory concentrations (MICs) obtained for planktonic cells cultured in 96-wells plates in various mouthrinse concentrations. Results: Planktonic cells of aerobic microorganisms were inhibited by all mouthrinses at concentrations ≤2% (v/v) of the stock preparation. Chlorhexidine (0.2%)/Citrox (1%)TM had the highest antimicrobial activity, followed by Citrox (1%)TM, 0.2% Chlorhexidine, Chlorhexidine (0.2%)/Phenoxetol (0.1%)® and Citrox (1%)
- Published
- 2013
15. In vitro interaction of chronic wound bacteria in biofilms
- Author
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Malic, S, Hill, KE, Playle, R, Thomas, DW, Williams, DW, Malic, S, Hill, KE, Playle, R, Thomas, DW, and Williams, DW
- Published
- 2011
16. Detection and identification of specific bacteria in wound biofilms using peptide nucleic acid fluorescent in situ hybridisation
- Author
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Malic, S, Hill, KE, Hayes, A, Percival, SL, Thomas, DW, Williams, DW, Malic, S, Hill, KE, Hayes, A, Percival, SL, Thomas, DW, and Williams, DW
- Abstract
Biofilms provide a reservoir of potentially infectious micro-organisms that are resistant to antimicrobial agents, and their importance in the failure of medical devices and chronic inflammatory conditions is increasingly being recognized. Particular research interest exists in the association of biofilms with wound infection and non-healing, i.e. chronic wounds. In this study, fluorescent in situ hybridization (FISH) was used in combination with confocal laser scanning microscopy (CLSM) to detect and characterize the spatial distribution of biofilm-forming bacteria which predominate within human chronic skin wounds (Pseudomonas aeruginosa, Staphylococcus aureus, Streptococcus sp. and Micrococcus sp.). In vitro biofilms were prepared using a constant-depth film fermenter and a reconstituted human epidermis model. In vivo biofilms were also studied using biopsy samples from non-infected chronic venous leg ulcers. The specificity of peptide nucleic acid (PNA) probes for the target organisms was confirmed using mixed preparations of planktonic bacteria and multiplex PNA probing. Identification and location of individual bacterial species within multi-species biofilms demonstrated that P. aeruginosa was predominant. CLSM revealed clustering of individual species within mixed-species biofilms. FISH analysis of archive chronic wound biopsy sections showed bacterial presence and allowed bacterial load to be determined. The application of this standardized procedure makes available an assay for identification of single- or multi-species bacterial populations in tissue biopsies. The technique provides a reliable tool to study bacterial biofilm formation and offers an approach to assess targeted biofilm disruption strategies in vivo.
- Published
- 2009
17. Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with F-SK78
- Author
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Pernot, L., primary, Novakovic, I., additional, Westermaier, Y., additional, Perozzo, R., additional, Raic-Malic, S., additional, and Scapozza, L., additional
- Published
- 2013
- Full Text
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18. Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with SK-78
- Author
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Pernot, L., primary, Novakovic, I., additional, Westermaier, Y., additional, Perozzo, R., additional, Raic-Malic, S., additional, and Scapozza, L., additional
- Published
- 2013
- Full Text
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19. Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with IN43/5
- Author
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Pernot, L., primary, Novakovic, I., additional, Westermaier, Y., additional, Perozzo, R., additional, Raic-Malic, S., additional, and Scapozza, L., additional
- Published
- 2013
- Full Text
- View/download PDF
20. In vitro interaction of chronic wound bacteria in biofilms
- Author
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Malic, S., primary, Hill, K.E., additional, Playle, R., additional, Thomas, D.W., additional, and Williams, D.W., additional
- Published
- 2011
- Full Text
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21. An in vitro model of chronic wound biofilms to test wound dressings and assess antimicrobial susceptibilities
- Author
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Hill, K. E., primary, Malic, S., additional, McKee, R., additional, Rennison, T., additional, Harding, K. G., additional, Williams, D. W., additional, and Thomas, D. W., additional
- Published
- 2010
- Full Text
- View/download PDF
22. Synthesis and X-ray crystal structure study of the hydroxyurea and hydantoin derivatives of l-valine
- Author
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Opacic, N., primary, Zorc, B., additional, Cetina, M., additional, Mrvos-Sermek, D., additional, Raic-Malic, S., additional, and Mintas, M., additional
- Published
- 2005
- Full Text
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23. In vitrointeraction of chronic wound bacteria in biofilms
- Author
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Malic, S., Hill, K.E., Playle, R., Thomas, D.W., and Williams, D.W.
- Abstract
Objective:To use in vitrobiofilm models of wound bacterial isolates and compare the biofilms produced for different combinations of wound bacterial species.Method:In vitrobiofilms, generated by Pseudomonas aeruginosa, Staphylococcus aureus, Streptococcus oralisand Micrococcus luteusin microtitre plates and a constant depth film fermentor (cDFF), were studied. The tested isolates all originated from chronic venous leg ulcers. biofilms of individual and dual combinations of these species were generated in microtitre plate wells at 37°c for 24–96 hours and also in the CDFF for 7 days. The extent of biofilm formation from these systems was then measured using crystal violet staining and/or total viable counts.Results:All the chronic wound bacteria formed biofilms (both individually and in mixed culture) in these models. In mixed species microtitre plate biofilms, both P. aeruginosaand S. aureusappeared to antagonise biofilm formation by S. oralisand M. luteus, with P. aeruginosacompletely inhibiting the growth of these organisms. Similar effects were evident in the CDFF model, when all four bacterial species were added simultaneously, with M. luteusbeing ‘out-competed’ by the other organisms present and occurring at numbers at the limits of detection; however, there was an apparent increase in the numbers of S. oraliscompared with its single culture equivalent.Conclusion:The study highlighted differences in biofilm formation ability for the tested species in both closed and open model systems. Using dual species biofilms, distinct species antagonism was observed with apparent antagonism of pathogenic species over ‘commensal’ ones. Such a finding provides insight into possible bacterial interactions during development of ‘non-healing’ wound biofilms.Declaration of interest:The authors have no conflict of interest to declare. There were no external sources of funding for this study.
- Published
- 2011
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24. The Novel <SCP>l</SCP>- and <SCP>d</SCP>-Amino Acid Derivatives of Hydroxyurea and Hydantoins: Synthesis, X-ray Crystal Structure Study, and Cytostatic and Antiviral Activity Evaluations
- Author
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Opacic, N., Barbaric, M., Zorc, B., Cetina, M., Nagl, A., Frkovic, D., Kralj, M., Pavelic, K., Balzarini, J., Andrei, G., Snoeck, R., Clercq, E. De, Raic-Malic, S., and Mintas, M.
- Abstract
The novel
l - andd -amino acid derivatives of hydroxyurea5a − o were prepared by aminolysis of N-(1-benzotriazolecarbonyl)amino acid amides4a − o with hydroxylamine. The hydantoin derivatives6a − e,m,p were synthesized by base-catalyzed cyclization of amides4 , common precursors for5 and6 . X-ray crystal structure analysis shows that the C5 atom in6e possesses the S configuration, which is consistent with the configuration of the starting reagent,l -leucine. Amongl -amino acid derivatives of hydroxyurea,5h and5i inhibited specifically murine leukemia and human T-lymphocytes (IC50 = 10−19 μM) and showed selectivity with respect to normal human fibroblasts (WI 38).d -Amino acid derivatives of hydroxyurea5m and5o inhibited the growth of all tumor cell lines (IC50 = 4.8−83.9 μM), but not the growth of normal fibroblasts (WI 38; IC50 > 100 μM). Results on antiviral evaluations showed that N-(1-benzotriazolecarbonyl)amino acid amide4m and hydantoin6m had marked activity against the Davis strain of CMV (4m , EC50 = 3.2 μg/mL;6m , EC50 = 4.0 μg/mL). However, these compounds showed also rather expressed cytotoxicity (4m , CC50 = 43.4 μg/mL;6m , CC50 = 12.5 μg/mL-1).- Published
- 2005
25. Synthesis and Biological Evaluation of Iodinated and Fluorinated 9-(2-Hydroxypropyl) and 9-(2-Hydroxyethoxy)methyl Purine Nucleoside Analogues
- Author
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Prekupec, S., Svedruzic, D., Gazivoda, T., Mrvos-Sermek, D., Nagl, A., Grdisa, M., Pavelic, K., Balzarini, J., Clercq, E. De, Folkers, G., Scapozza, L., Mintas, M., and Raic-Malic, S.
- Abstract
The novel fluorinated and iodinated purine derivatives containing 9-(2-hydroxypropyl) (
1a − 7a and9a − 13a ) and 9-(2-hydroxyethoxymethyl) (1b − 3b, 5b , and7b − 12c ) side chains were synthesized by a multistep synthetic route involving Baltz−Schiemann's fluorination and diazotation/iodination as key reactions. An unequivocal proof for the stereostructure of5b was obtained by X-ray structure analysis. New compounds were evaluated for their cytostatic activity against murine leukemia (L1210); mammary carcinoma (FM3A); and human T-lymphocytes (Molt4/C8 and CEM), melanoma (HBL), cervical carcinoma (HeLa), colon carcinoma (HT29 and SW620), laryngeal carcinoma (Hep2), and pancreatic carcinoma (MiaPaCa2) as well as diploid fibroblasts (WI38). Of all the compounds, the 2-aminopurin-6-thione derivative9a showed the most pronounced inhibitory activity against human SW620 cells. The 2-aminopurin-6-thione derivative9b exhibited the most selective inhibitory activity against human HeLa, Hep2, SW620, and murine L1210 cell proliferation as compared to normal fibroblast (WI38) cell proliferation. None of the compounds showed inhibitory activities against HIV-1, HIV-2, HSV-1, and HSV-2, vaccinia, vesicular stomatitis, parainfluenza-3, reovirus-1, Sindbis, Coxsackie B4, or respiratory syncytial virus. The new purine derivatives, and particularly9a and9b , appear to demonstrate sufficient cytostatic potency and selectivity to justify further evaluation of their potential.- Published
- 2003
26. Synthesis and Antitumor Activities of Novel Pyrimidine Derivatives of 2,3-O,O-Dibenzyl-6-deoxy-<SCP>l</SCP>-ascorbic Acid and 4,5-Didehydro-5,6- dideoxy-<SCP>l</SCP>-ascorbic Acid
- Author
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Raic-Malic, S., Svedruzic, D., Gazivoda, T., Marunovic, A., Hergold-Brundic, A., Nagl, A., Balzarini, J., Clercq, E. De, and Mintas, M.
- Abstract
The new pyrimidine derivatives of 2,3-O,O-dibenzyl-6-deoxy-
l -ascorbic acid (8 −10 ) were synthesized by condensation of uracil and its 5-fluoro- and 5-trifluoromethyl-substituted derivatives with 4-(5,6-epoxypropyl)-2,3-O,O-dibenzyl-l -ascorbic acid (7 ), while pyrimidine derivatives of 4,5-didehydro-5,6-dideoxy-l -ascorbic acid (14 −17 ) with free C-2 and C-3 hydroxy groups in the lactone ring were obtained by debenzylation of11 −13 with boron trichloride. Z-Configuration of the C4&dbd;C5 double bond and position of the benzyl group in the lactone ring of14 were deduced from their 1H and 13C NMR spectra and connectivities in COSY, ROESY, and HMBC spectra. The exact stereostructure of13 was confirmed by its X-ray crystal structure analysis. Of all the compounds in the series, compound16 containing a 5-fluoro-substituted uracil ring showed the most significant antitumor activities against murine leukemia L1210/0 (IC50 = 1.4 μg/mL), murine mammary carcinoma FM3A/0 (IC50 = 0.78 μg/mL), and, to a lesser extent, human T-lymphocyte cells Molt4/C8 (IC50 = 31.8 μg/mL) and CEM/0 cell lines (IC50 = 20.9 μg/mL).- Published
- 2000
27. Synthesis and biological evaluation of the novel purine and pyrimidine nucleoside analogues containing 2,3-epoxypropyl, 3-amino-2-hydroxypropyl or 2,3-epoxypropyl ether moieties
- Author
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Raic-Malic, S., Grdisa, M., Paveliac, K., and Mintas, M.
- Published
- 1999
- Full Text
- View/download PDF
28. Novel Pyrimidine and Purine Derivatives of <SCP>l</SCP>-Ascorbic Acid: Synthesis and Biological Evaluation
- Author
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Raic-Malic, S., Hergold-Brundic, A., Nagl, A., Grdisa, M., Pavelic, K., Clercq, E. De, and Mintas, M.
- Abstract
The novel pyrimidine derivatives
1 −6 of 2,3-dibenzyl-4,5-didehydro-5,6-dideoxy-l -ascorbic acid were synthesized by the condensation of pyrimidine bases with 5,6-diacetyl-2,3-dibenzyl-l -ascorbic acid (DDA). Both N-9 (7 ) and N-7 (8 ) regioisomers were obtained in the reaction of 6-chloropurine with 5-acetyl-6-bromo-2,3-dibenzyl-l -ascorbic acid (ABDA), while the reaction of 6-(N-pyrrolyl)purine with ABDA afforded exclusively the N-9 isomer9 . Structures of all newly prepared compounds were deduced from the chemical shifts in 1H and 13C NMR spectra, as well as connectivities in 2D homo- and heteronuclear correlation spectra. An unambiguous proof of the structure and conformation of7 was obtained by X-ray crystallographic analysis. Compounds1 −9 were found to exert cytostatic activities against malignant cell lines: pancreatic carcinoma (MiaPaCa2), breast carcinoma (MCF7), cervical carcinoma (HeLa), laryngeal carcinoma (Hep2), murine leukemia (L1210/0), murine mammary carcinoma (FM3A), and human T-lymphocytes (Molt4/C8 and CEM/0), as well as antiviral activities against varicella-zoster virus (TK+VZV and TK-VZV) and cytomegalovirus (CMV). The compound6 containing a trifluoromethyl-substituted uracil ring exhibited marked antitumor activity. The N-7-substituted purine regioisomer8 had greater inhibitory effects on the murine L1210/0 and human CEM/0 cell lines than the N-9 isomer7 . Compound9 with the 6-purine-substituted pyrrolo moiety had a more pronounced selective cytostatic activity against human (Molt4/C8 and CEM/0) cell lines than murine (L1210/0 and FM3A/0) and human (MiaPaCa2, MCF7, HeLa, and Hep2) tumor cell lines and normal fibroblasts (Hef522). The compound6 exhibited the most potent antiviral activities against TK+VZV, TK-VZV, and CMV, albeit at concentrations that were only slightly lower than the cytotoxic concentrations.- Published
- 1999
29. Characterisation of biofilms within medical devices
- Author
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Cairns, SA, Williams, DW, Thomas, J, Hooper, S, Wise, Matthew, Frost, Paul, Malic, S, Lewis, M, Harding, KG, Leaper, DJ, Cairns, SA, Williams, DW, Thomas, J, Hooper, S, Wise, Matthew, Frost, Paul, Malic, S, Lewis, M, Harding, KG, and Leaper, DJ
30. Linking plaque and endotrach biofilm/matrix by structure and composition
- Author
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Malic, S, Thomas, J, Williams, DW, Hooper, SJ, Rowe, WG, Wise, Matthew, Frost, Paul, Cairns, S, Lewis, M, Malic, S, Thomas, J, Williams, DW, Hooper, SJ, Rowe, WG, Wise, Matthew, Frost, Paul, Cairns, S, and Lewis, M
31. PCR DGGE to unmask streptococcus mutans in endotrach biofilms
- Author
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Thomas, J, Williams, D.W., Hooper, SJ, Malic, S, Wise, Matthew, Frost, Paul, Cairns, S, Lewis, M, Thomas, J, Williams, D.W., Hooper, SJ, Malic, S, Wise, Matthew, Frost, Paul, Cairns, S, and Lewis, M
32. Profiling microbial diversity in endotracheal tube biofilms
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Williams, DW, Thomas, J, Hooper, SJ, Wise, Matthew, Frost, Paul, Malic, S, Cairns, S, Lewis, M, Williams, DW, Thomas, J, Hooper, SJ, Wise, Matthew, Frost, Paul, Malic, S, Cairns, S, and Lewis, M
33. Microbial diversity in biofilms, wounds and medical device
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Cairns, SA, Williams, DW, Thomas, J, Hooper, S, Wise, Matthew, Frost, Paul, Malic, S, Lewis, M, Harding, KG, Leaper, DJ, Cairns, SA, Williams, DW, Thomas, J, Hooper, S, Wise, Matthew, Frost, Paul, Malic, S, Lewis, M, Harding, KG, and Leaper, DJ
34. Microbial diversity in biofilms, wounds and medical device
- Author
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Cairns, SA, Williams, DW, Thomas, J, Hooper, S, Wise, Matthew, Frost, Paul, Malic, S, Lewis, M, Harding, KG, Leaper, DJ, Cairns, SA, Williams, DW, Thomas, J, Hooper, S, Wise, Matthew, Frost, Paul, Malic, S, Lewis, M, Harding, KG, and Leaper, DJ
35. Profiling microbial diversity in endotracheal tube biofilms
- Author
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Williams, DW, Thomas, J, Hooper, SJ, Wise, Matthew, Frost, Paul, Malic, S, Cairns, S, Lewis, M, Williams, DW, Thomas, J, Hooper, SJ, Wise, Matthew, Frost, Paul, Malic, S, Cairns, S, and Lewis, M
36. Characterisation of biofilms within medical devices
- Author
-
Cairns, SA, Williams, DW, Thomas, J, Hooper, S, Wise, Matthew, Frost, Paul, Malic, S, Lewis, M, Harding, KG, Leaper, DJ, Cairns, SA, Williams, DW, Thomas, J, Hooper, S, Wise, Matthew, Frost, Paul, Malic, S, Lewis, M, Harding, KG, and Leaper, DJ
37. Linking plaque and endotrach biofilm/matrix by structure and composition
- Author
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Malic, S, Thomas, J, Williams, DW, Hooper, SJ, Rowe, WG, Wise, Matthew, Frost, Paul, Cairns, S, Lewis, M, Malic, S, Thomas, J, Williams, DW, Hooper, SJ, Rowe, WG, Wise, Matthew, Frost, Paul, Cairns, S, and Lewis, M
38. PCR DGGE to unmask streptococcus mutans in endotrach biofilms
- Author
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Thomas, J, Williams, D.W., Hooper, SJ, Malic, S, Wise, Matthew, Frost, Paul, Cairns, S, Lewis, M, Thomas, J, Williams, D.W., Hooper, SJ, Malic, S, Wise, Matthew, Frost, Paul, Cairns, S, and Lewis, M
39. A Simple Method of Correcting99Mo Breakthrough from a99mTc-99Mo Generator
- Author
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Lo, Hing-Har, primary, Berke, Raymond A., additional, and Potsaid, Malic S., additional
- Published
- 1969
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40. A Simple Method of Correcting99Mo Breakthrough from a99mTc-99Mo Generator
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Malic S. Potsaid, Raymond A. Berke, and Hing-Har Lo
- Subjects
Molybdenum ,Radiochemistry ,Chromatography ,Generator (computer programming) ,business.industry ,Elution ,Technetium ,Medicine ,Radiology, Nuclear Medicine and imaging ,Contamination ,business - Abstract
The eluent of a 99mTc-99Mo commercial generator is routinely checked for contamination by 99Mo. Infrequently we have found a concentration of 99Mo higher than the level permitted by AEC regulations (1 µCi 99Mo/mCi of 99mTc). A method of reducing the level of 99Mo contamination by passing the contaminated eluent through a second exhausted generator was suggested by E. R. Squibb & Sons, Inc. Though tandom elution is known to increase the yield of 99mTc (1), its use in the correction of 99Mo breakthrough has not previously been reported. Method The eluent contaminated with 99Mo was passed through a recently exhausted generator which had been demonstrated to be free of significant contamination by 99Mo while in use. Prior to and following the passage of the contaminated eluent through the exhausted generator, levels of 99Mo were measured by two different methods. In the first: method, described in the Squibb pamphlet,3 the total eluent in a lead shield approximately 1'4 inch thick was compared to a l37Cs stan...
- Published
- 1969
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- View/download PDF
41. Antigenic determinants driving serogroup-specific antibody response to Neisseria meningitidis C, W, and Y capsular polysaccharides: Insights for rational vaccine design.
- Author
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Pietri GP, Bertuzzi S, Karnicar K, Unione L, Lisnic B, Malic S, Miklic K, Novak M, Calloni I, Santini L, Usenik A, Romano MR, Adamo R, Jonjic S, Turk D, Jiménez-Barbero J, and Lenac Rovis T
- Subjects
- Antibodies, Bacterial immunology, Epitopes immunology, Epitopes chemistry, Animals, Mice, Humans, Bacterial Capsules immunology, Bacterial Capsules chemistry, Antibody Formation immunology, Antibodies, Monoclonal immunology, Antibodies, Monoclonal chemistry, Serogroup, Neisseria meningitidis immunology, Neisseria meningitidis chemistry, Meningococcal Vaccines immunology, Meningococcal Vaccines chemistry, Polysaccharides, Bacterial immunology, Polysaccharides, Bacterial chemistry
- Abstract
Meningococcal glycoconjugate vaccines sourced from capsular polysaccharides (CPSs) of pathogenic Neisseria meningitidis strains are well-established measures to prevent meningococcal disease. However, the exact structural factors responsible for antibody recognition are not known. CPSs of Neisseria meningitidis serogroups Y and W differ by a single stereochemical center, yet they evoke specific immune responses. Herein, we developed specific monoclonal antibodies (mAbs) targeting serogroups C, Y, and W and evaluated their ability to kill bacteria. We then used these mAbs to dissect structural elements responsible for carbohydrate-protein interactions. First, Men oligosaccharides were screened against the mAbs using ELISA to select putative lengths representing the minimal antigenic determinant. Next, molecular interaction features between the mAbs and serogroup-specific sugar fragments were elucidated using STD-NMR. Moreover, X-ray diffraction data with the anti-MenW CPS mAb enabled the elucidation of the sugar-antibody binding mode. Our findings revealed common traits in the epitopes of all three sialylated serogroups. The minimal binding epitopes typically comprise five to six repeating units. Moreover, the O-acetylation of the neuraminic acid moieties was fundamental for mAb binding. These insights hold promise for the rational design of optimized meningococcal oligosaccharides, opening new avenues for novel production methods, including chemical or enzymatic approaches., Competing Interests: Declaration of competing interest LS, MRR and RA are employee of GSK. GPP was a PhD fellow of MEDRI and performed a secondment in GSK during his doctorate. Menjugate, Menveo, Menitorix, Menhibrix are registered trademarks from GSK Vaccines; Menactra is a registered trademark from Sanofi Pasteur; Nimenrix is a registered trademark from Pfizer; NeisVac is a registerd trademark from North American Vaccine Inc.- Baxter Bioscience., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2024
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42. Epitope Recognition of a Monoclonal Antibody Raised against a Synthetic Glycerol Phosphate Based Teichoic Acid.
- Author
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Berni F, Kalfopoulou E, Gimeno Cardells AM, Carboni F, van der Es D, Romero-Saavedra F, Laverde D, Miklic K, Malic S, Rovis TL, Jonjic S, Ali S, Overkleeft HS, Hokke CH, van Diepen A, Adamo R, Jiménez-Barbero J, van der Marel GA, Huebner J, and Codée JDC
- Subjects
- Animals, Antibodies, Monoclonal, Murine-Derived immunology, Enzyme-Linked Immunosorbent Assay, Epitopes chemistry, Epitopes immunology, Glycerophosphates chemistry, Glycerophosphates immunology, Mice, Nuclear Magnetic Resonance, Biomolecular, Protein Binding, Teichoic Acids chemistry, Teichoic Acids immunology, Antibodies, Monoclonal, Murine-Derived metabolism, Epitopes metabolism, Glycerophosphates metabolism, Teichoic Acids metabolism
- Abstract
Glycerol phosphate (GroP)-based teichoic acids (TAs) are antigenic cell-wall components found in both enterococcus and staphylococcus species. Their immunogenicity has been explored using both native and synthetic structures, but no details have yet been reported on the structural basis of their interaction with antibodies. This work represents the first case study in which a monoclonal antibody, generated against a synthetic TA, was developed and employed for molecular-level binding analysis using TA microarrays, ELISA, SPR-analyses, and STD-NMR spectroscopy. Our findings show that the number and the chirality of the GroP residues are crucial for interaction and that the sugar appendage contributes to the presentation of the backbone to the binding site of the antibody.
- Published
- 2021
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43. Phenotypic and Genotypic Characterization of Novel Polyvalent Bacteriophages With Potent In Vitro Activity Against an International Collection of Genetically Diverse Staphylococcus aureus .
- Author
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Whittard E, Redfern J, Xia G, Millard A, Ragupathy R, Malic S, and Enright MC
- Subjects
- Genotype, Humans, Staphylococcus, Staphylococcus Phages genetics, Staphylococcus aureus genetics, Bacteriophages genetics, Methicillin-Resistant Staphylococcus aureus genetics, Staphylococcal Infections
- Abstract
Phage therapy recently passed a key milestone with success of the first regulated clinical trial using systemic administration. In this single-arm non-comparative safety study, phages were administered intravenously to patients with invasive Staphylococcus aureus infections with no adverse reactions reported. Here, we examined features of 78 lytic S. aureus phages, most of which were propagated using a S. carnosus host modified to be broadly susceptible to staphylococcal phage infection. Use of this host eliminates the threat of contamination with staphylococcal prophage - the main vector of S. aureus horizontal gene transfer. We determined the host range of these phages against an international collection of 185 S. aureus isolates with 56 different multilocus sequence types that included multiple representatives of all epidemic MRSA and MSSA clonal complexes. Forty of our 78 phages were able to infect > 90% of study isolates, 15 were able to infect > 95%, and two could infect all 184 clinical isolates, but not a phage-resistant mutant generated in a previous study. We selected the 10 phages with the widest host range for in vitro characterization by planktonic culture time-kill analysis against four isolates:- modified S. carnosus strain TM300H, methicillin-sensitive isolates D329 and 15981, and MRSA isolate 252. Six of these 10 phages were able to rapidly kill, reducing cell numbers of at least three isolates. The four best-performing phages, in this assay, were further shown to be highly effective in reducing 48 h biofilms on polystyrene formed by eight ST22 and eight ST36 MRSA isolates. Genomes of 22 of the widest host-range phages showed they belonged to the Twortvirinae subfamily of the order Caudovirales in three main groups corresponding to Silviavirus , and two distinct groups of Kayvirus . These genomes assembled as single-linear dsDNAs with an average length of 140 kb and a GC content of c. 30%. Phages that could infect > 96% of S. aureus isolates were found in all three groups, and these have great potential as therapeutic candidates if, in future studies, they can be formulated to maximize their efficacy and eliminate emergence of phage resistance by using appropriate combinations., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Whittard, Redfern, Xia, Millard, Ragupathy, Malic and Enright.)
- Published
- 2021
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44. Methylcellulose Hydrogel with Melissa officinalis Essential Oil as a Potential Treatment for Oral Candidiasis.
- Author
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Serra E, Saubade F, Ligorio C, Whitehead K, Sloan A, Williams DW, Hidalgo-Bastida A, Verran J, and Malic S
- Abstract
Candida spp. are the most prevalent fungi of the human microbiota and are opportunistic pathogens that can cause oral candidiasis. Management of such infections is limited due to the low number of antifungal drugs available, their relatively high toxicity and the emergence of antifungal resistance. Therefore, much interest in the antimicrobial potential of natural compounds has recently been evident. The use of hydrogels in the delivery of biocides has been explored due to their biocompatibility, ease with drug encapsulation, and due to their potential to confer mechanical and structural properties similar to biological tissue. Methylcellulose hydrogels (10% ( w / v )) with 1% ( v / v ) and 2% ( v / v ) Melissa officinalis oil were synthesised. The rheological properties and gelation time of the hydrogels were evaluated. Antimicrobial action, the antifungal potential and ability to displace Candida were determined. Rheological tests revealed that the hydrogel jellified in three minutes at 37 °C. Loaded hydrogels successfully inhibited Candida albicans growth as evident by zone of inhibition and time-kill assays. A significant reduction in retained C. albicans was demonstrated with the hydrogel at 2% Melissa officinalis concentration. This work demonstrated that an essential oil-loaded hydrogel had the potential to provide a novel antimicrobial therapy for the treatment of oral candidiasis.
- Published
- 2020
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45. Development of Opsonic Mouse Monoclonal Antibodies against Multidrug-Resistant Enterococci.
- Author
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Kalfopoulou E, Laverde D, Miklic K, Romero-Saavedra F, Malic S, Carboni F, Adamo R, Lenac Rovis T, Jonjic S, and Huebner J
- Subjects
- Animals, Antigens, Bacterial immunology, Bacterial Capsules chemistry, Mice, Polysaccharides immunology, Antibodies, Monoclonal immunology, Drug Resistance, Microbial, Enterococcus faecalis immunology, Enterococcus faecium immunology, Immunotherapy methods, Opsonin Proteins immunology
- Abstract
Multidrug-resistant enterococci are major causes of hospital-acquired infections. Immunotherapy with monoclonal antibodies (MAbs) targeting bacterial antigens would be a valuable treatment option in this setting. Here, we describe the development of two MAbs through hybridoma technology that target antigens from the most clinically relevant enterococcal species. Diheteroglycan (DHG), a well-characterized capsular polysaccharide of Enterococcus faecalis , and the secreted antigen A (SagA), an immunogenic protein from Enterococcus faecium , are both immunogens that have been proven to raise opsonic and cross-reactive antibodies against enterococcal strains. For this purpose, a conjugated form of the native DHG with SagA was used to raise the antibodies in mice, while enzyme-linked immunosorbent assay and opsonophagocytic assay were combined in the selection process of hybridoma cells producing immunoreactive and opsonic antibodies targeting the selected antigens. From this process, two highly specific IgG1(κ) MAbs were obtained, one against the polysaccharide (DHG.01) and one against the protein (SagA.01). Both MAbs exhibited good opsonic killing against the target bacterial strains: DHG.01 showed 90% killing against E. faecalis type 2, and SagA.01 showed 40% killing against E. faecium 11231/6. In addition, both MAbs showed cross-reactivity toward other E. faecalis and E. faecium strains. The sequences from the variable regions of the heavy and light chains were reconstructed in expression vectors, and the activity of the MAbs upon expression in eukaryotic cells was confirmed with the same immunological assays. In summary, we identified two opsonic MAbs against enterococci which could be used for therapeutic or prophylactic approaches against enterococcal infections., (Copyright © 2019 Kalfopoulou et al.)
- Published
- 2019
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- View/download PDF
46. Zeolite-embedded silver extends antimicrobial activity of dental acrylics.
- Author
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Malic S, Rai S, Redfern J, Pritchett J, Liauw CM, Verran J, and Tosheva L
- Subjects
- Acrylic Resins chemistry, Anti-Infective Agents chemistry, Candida albicans drug effects, Candida albicans growth & development, Dental Materials chemistry, Dentures microbiology, Drug Liberation, Fusobacterium nucleatum drug effects, Fusobacterium nucleatum growth & development, Humans, Kinetics, Silver chemistry, Staphylococcus aureus drug effects, Staphylococcus aureus growth & development, Streptococcus mutans drug effects, Streptococcus mutans growth & development, Acrylic Resins pharmacology, Anti-Infective Agents pharmacology, Delayed-Action Preparations, Dental Materials pharmacology, Silver pharmacology, Zeolites chemistry
- Abstract
The insertion of prosthetic devices into the oral cavity affects the oral microflora and results in accumulation of microorganisms on the prosthetic surface. Such fouling of denture surfaces can lead to a number of oral diseases and consequently to the replacement of the denture. Here, we report the post-synthesis introduction of silver in zeolite-loaded dental acrylic (DAZ) resins that does not influence the mechanical or aesthetic properties of the DA resins, and provides them with a long-term antimicrobial activity. Na-FAU zeolite (2 wt%) was incorporated into DA resin, which was conventionally processed and cut into 10 mm × 20 mm × 3 mm coupons. The Na
+ in the zeolite was then exchanged with Ag+ via immersion of the DAZ coupons in 0.01 M AgNO3 solution to obtain DAZ/Ag-treated coupons used in antimicrobial tests. Antimicrobial tests showed that the DAZ/Ag-treated coupons were active against Candida albicans (a reference and a clinically relevant strain), Streptococcus mutans and Fusobacterium nucleatum. Ag leaching tests on the Ag-charged coupons at 1, 2, 3, 4, 7, 14, 30 and 45 days of incubation in distilled water at 37 °C, indicated sustained release of silver. Antimicrobial tests using a reference Candida albicans strain showed that the leached coupons retained antimicrobial activity after 45 days immersion in distilled water, but, after 60 days incubation no antimicrobial activity was observed. Cytotoxicity assay results indicated that the DAZ/Ag-treated coupons showed no additional cytotoxicity compared to neat dental acrylic coupons., (Copyright © 2018 Elsevier B.V. All rights reserved.)- Published
- 2019
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47. Expression, Purification, and Biochemical Characterization of Human Afamin.
- Author
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Altamirano A, Naschberger A, Fürnrohr BG, Saldova R, Struwe WB, Jennings PM, Millán Martín S, Malic S, Plangger I, Lechner S, Pisano R, Peretti N, Linke B, Aguiar MM, Fresser F, Ritsch A, Lenac Rovis T, Goode C, Rudd PM, Scheffzek K, Rupp B, and Dieplinger H
- Subjects
- Amino Acid Sequence, Animals, Antibodies, Monoclonal metabolism, Antigen-Antibody Complex metabolism, CHO Cells, Carrier Proteins genetics, Carrier Proteins metabolism, Cloning, Molecular, Cricetulus, Escherichia coli genetics, Escherichia coli metabolism, Gene Expression, Genetic Vectors chemistry, Genetic Vectors metabolism, Glycoproteins genetics, Glycoproteins metabolism, Glycosylation, HEK293 Cells, Humans, Immunoglobulin Fab Fragments metabolism, Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase chemistry, Polysaccharides chemistry, Polysaccharides metabolism, Recombinant Proteins chemistry, Recombinant Proteins genetics, Recombinant Proteins metabolism, Serum Albumin, Human genetics, Serum Albumin, Human metabolism, Antibodies, Monoclonal chemistry, Antigen-Antibody Complex chemistry, Carrier Proteins chemistry, Glycoproteins chemistry, Immunoglobulin Fab Fragments chemistry, Protein Processing, Post-Translational, Serum Albumin, Human chemistry
- Abstract
Afamin is an 87 kDa glycoprotein with five predicted N-glycosylation sites. Afamin's glycan abundance contributes to conformational and chemical inhomogeneity presenting great challenges for molecular structure determination. For the purpose of studying the structure of afamin, various forms of recombinantly expressed human afamin (rhAFM) with different glycosylation patterns were thus created. Wild-type rhAFM and various hypoglycosylated forms were expressed in CHO, CHO-Lec1, and HEK293T cells. Fully nonglycosylated rhAFM was obtained by transfection of point-mutated cDNA to delete all N-glycosylation sites of afamin. Wild-type and hypo/nonglycosylated rhAFM were purified from cell culture supernatants by immobilized metal ion affinity and size exclusion chromatography. Glycan analysis of purified proteins demonstrated differences in micro- and macro-heterogeneity of glycosylation enabling the comparison between hypoglycosylated, wild-type rhAFM, and native plasma afamin. Because antibody fragments can work as artificial chaperones by stabilizing the structure of proteins and consequently enhance the chance for successful crystallization, we incubated a Fab fragment of the monoclonal anti-afamin antibody N14 with human afamin and obtained a stoichiometric complex. Subsequent results showed sufficient expression of various partially or nonglycosylated forms of rhAFM in HEK293T and CHO cells and revealed that glycosylation is not necessary for expression and secretion.
- Published
- 2018
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48. Antifungal Activity of Commercial Essential Oils and Biocides against Candida Albicans.
- Author
-
Serra E, Hidalgo-Bastida LA, Verran J, Williams D, and Malic S
- Abstract
Management of oral candidosis, most frequently caused by Candida albicans , is limited due to the relatively low number of antifungal drugs and the emergence of antifungal tolerance. In this study, the antifungal activity of a range of commercial essential oils, two terpenes, chlorhexidine and triclosan was evaluated against C. albicans in planktonic and biofilm form. In addition, cytotoxicity of the most promising compounds was assessed using murine fibroblasts and expressed as half maximal inhibitory concentrations (IC50). Antifungal activity was determined using a broth microdilution assay. The minimum inhibitory concentration (MIC) was established against planktonic cells cultured in a range of concentrations of the test agents. The minimal biofilm eradication concentration (MBEC) was determined by measuring re-growth of cells after pre-formed biofilm was treated for 24 h with the test agents. All tested commercial essential oils demonstrated anticandidal activity (MICs from 0.06% ( v / v ) to 0.4% ( v / v )) against planktonic cultures, with a noticeable increase in resistance exhibited by biofilms (MBECs > 1.5% ( v / v )). The IC50s of the commercial essential oils were lower than the MICs, while a one hour application of chlorhexidine was not cytotoxic at concentrations lower than the MIC. In conclusion, the tested commercial essential oils exhibit potential as therapeutic agents against C. albicans , although host cell cytotoxicity is a consideration when developing these new treatments., Competing Interests: The authors declare no conflicts of interest.
- Published
- 2018
- Full Text
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49. The N14 anti-afamin antibody Fab: a rare V L 1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling.
- Author
-
Naschberger A, Fürnrohr BG, Lenac Rovis T, Malic S, Scheffzek K, Dieplinger H, and Rupp B
- Subjects
- Animals, Antigen-Antibody Complex, Complementarity Determining Regions, Crystallography, X-Ray, Glycosylation, Humans, Immunoglobulin Variable Region chemistry, Immunoglobulin Variable Region immunology, Mice, Models, Molecular, Serum Albumin, Human, Antibodies, Monoclonal chemistry, Antibodies, Monoclonal immunology, Carrier Proteins immunology, Glycoproteins immunology, Immunoglobulin Fab Fragments chemistry, Immunoglobulin Fab Fragments immunology, Serum Albumin immunology
- Abstract
The monoclonal antibody N14 is used as a detection antibody in ELISA kits for the human glycoprotein afamin, a member of the albumin family, which has recently gained interest in the capture and stabilization of Wnt signalling proteins, and for its role in metabolic syndrome and papillary thyroid carcinoma. As a rare occurrence, the N14 Fab is N-glycosylated at Asn26L at the onset of the V
L 1 antigen-binding loop, with the α-1-6 core fucosylated complex glycan facing out of the L1 complementarity-determining region. The crystal structures of two non-apparent (pseudo) isomorphous crystals of the N14 Fab were analyzed, which differ significantly in the elbow angles, thereby cautioning against the overinterpretation of domain movements upon antigen binding. In addition, the map quality at 1.9 Å resolution was sufficient to crystallographically re-sequence the variable VL and VH domains and to detect discrepancies in the hybridoma-derived sequence. Finally, a conservatively refined parsimonious model is presented and its statistics are compared with those from a less conservatively built model that has been modelled more enthusiastically. Improvements to the PDB validation reports affecting ligands, clashscore and buried surface calculations are suggested.- Published
- 2016
- Full Text
- View/download PDF
50. Recent trends in 1,2,3-Triazolo-nucleosides as promising anti-infective and anticancer agents.
- Author
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Raic-Malic S and Mescic A
- Subjects
- Anti-Infective Agents chemical synthesis, Anti-Infective Agents pharmacology, Antineoplastic Agents chemical synthesis, Antineoplastic Agents toxicity, Apoptosis drug effects, Bacteria drug effects, Click Chemistry, Fungi drug effects, Humans, Hydrolases antagonists & inhibitors, Hydrolases metabolism, Nucleosides chemical synthesis, Nucleosides pharmacology, Viruses drug effects, Anti-Infective Agents chemistry, Antineoplastic Agents chemistry, Nucleosides chemistry, Triazoles chemistry
- Abstract
The concept of click chemistry represented by the formation of the 1,2,3-triazole core has found wide application in drug discovery, particularly in the early discovery phases and the lead optimization process. 1,2,3-Triazoles ha ve attracted considerable attention in recent years because of their wide range of biological activities against various viruses, malignant cells, microorganisms and their inhibitory activities against several enzymes. This review emphasizes the recent advances on diverse and potent biological profiles of 1,2,3-triazolo-nucleosides, along with emerging application of click chemistry in their synthesis, and their perspective in the development of new bioactive chemical entities in the future. The work is primarily addressed to antiviral, antimicrobial and anticancer potency of this important structural motifs in which the 1,2,3-triazole ring acts as a nucleobase surrogate or is linked to a nucleobase or a sugar/sugar mimic moiety.
- Published
- 2015
- Full Text
- View/download PDF
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