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1. Vulnerability of mineral-associated soil organic carbon to climate across global drylands

Author

Díaz-Martínez, Paloma, Maestre, Fernando T., Moreno-Jiménez, Eduardo, Delgado-Baquerizo, Manuel, Eldridge, David J., Saiz, Hugo, Gross, Nicolas, Le Bagousse-Pinguet, Yoann, Gozalo, Beatriz, Ochoa, Victoria, Guirado, Emilio, García-Gómez, Miguel, Valencia, Enrique, Asensio, Sergio, Berdugo, Miguel, Martínez-Valderrama, Jaime, Mendoza, Betty J., García-Gil, Juan C., Zaccone, Claudio, Panettieri, Marco, García-Palacios, Pablo, Fan, Wei, Benavente-Ferraces, Iria, Rey, Ana, Eisenhauer, Nico, Cesarz, Simone, Abedi, Mehdi, Ahumada, Rodrigo J., Alcántara, Julio M., Amghar, Fateh, Aramayo, Valeria, Arroyo, Antonio I., Bahalkeh, Khadijeh, Ben Salem, Farah, Blaum, Niels, Boldgiv, Bazartseren, Bowker, Matthew A., Bran, Donaldo, Branquinho, Cristina, Bu, Chongfeng, Cáceres, Yonatan, Canessa, Rafaella, Castillo-Monroy, Andrea P., Castro, Ignacio, Castro-Quezada, Patricio, Chibani, Roukaya, Conceição, Abel A., Currier, Courtney M., Darrouzet-Nardi, Anthony, Deák, Balázs, Dickman, Christopher R., Donoso, David A., Dougill, Andrew J., Durán, Jorge, Ejtehadi, Hamid, Espinosa, Carlos, Fajardo, Alex, Farzam, Mohammad, Ferrante, Daniela, Fraser, Lauchlan H., Gaitán, Juan J., Gusman Montalván, Elizabeth, Hernández-Hernández, Rosa M., von Hessberg, Andreas, Hölzel, Norbert, Huber-Sannwald, Elisabeth, Hughes, Frederic M., Jadán-Maza, Oswaldo, Geissler, Katja, Jentsch, Anke, Ju, Mengchen, Kaseke, Kudzai F., Kindermann, Liana, Koopman, Jessica E., Le Roux, Peter C., Liancourt, Pierre, Linstädter, Anja, Liu, Jushan, Louw, Michelle A., Maggs-Kölling, Gillian, Makhalanyane, Thulani P., Issa, Oumarou Malam, Marais, Eugene, Margerie, Pierre, Mazaneda, Antonio J., McClaran, Mitchel P., Messeder, João Vitor S., Mora, Juan P., Moreno, Gerardo, Munson, Seth M., Nunes, Alice, Oliva, Gabriel, Oñatibia, Gastón R., Osborne, Brooke, Peter, Guadalupe, Pueyo, Yolanda, Quiroga, R. Emiliano, Reed, Sasha C., Reyes, Victor M., Rodríguez, Alexandra, Ruppert, Jan C., Sala, Osvaldo, Salah, Ayman, Sebei, Julius, Sloan, Michael, Solongo, Shijirbaatar, Stavi, Ilan, Stephens, Colton R. A., Teixido, Alberto L., Thomas, Andrew D., Throop, Heather L., Tielbörger, Katja, Travers, Samantha, Val, James, Valko, Orsolya, van den Brink, Liesbeth, Velbert, Frederike, Wamiti, Wanyoike, Wang, Deli, Wang, Lixin, Wardle, Glenda M., Yahdjian, Laura, Zaady, Eli, Zeberio, Juan M., Zhang, Yuanming, Zhou, Xiaobing, and Plaza, César

Published
2024
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2. Unforeseen plant phenotypic diversity in a dry and grazed world

Author

Gross, Nicolas, Maestre, Fernando T., Liancourt, Pierre, Berdugo, Miguel, Martin, Raphaël, Gozalo, Beatriz, Ochoa, Victoria, Delgado-Baquerizo, Manuel, Maire, Vincent, Saiz, Hugo, Soliveres, Santiago, Valencia, Enrique, Eldridge, David J., Guirado, Emilio, Jabot, Franck, Asensio, Sergio, Gaitán, Juan J., García-Gómez, Miguel, Martínez, Paloma, Martínez-Valderrama, Jaime, Mendoza, Betty J., Moreno-Jiménez, Eduardo, Pescador, David S., Plaza, César, Pijuan, Ivan Santaolaria, Abedi, Mehdi, Ahumada, Rodrigo J., Amghar, Fateh, Arroyo, Antonio I., Bahalkeh, Khadijeh, Bailey, Lydia, Ben Salem, Farah, Blaum, Niels, Boldgiv, Bazartseren, Bowker, Matthew A., Branquinho, Cristina, van den Brink, Liesbeth, Bu, Chongfeng, Canessa, Rafaella, Castillo-Monroy, Andrea del P., Castro, Helena, Castro, Patricio, Chibani, Roukaya, Conceição, Abel Augusto, Darrouzet-Nardi, Anthony, Davila, Yvonne C., Deák, Balázs, Donoso, David A., Durán, Jorge, Espinosa, Carlos, Fajardo, Alex, Farzam, Mohammad, Ferrante, Daniela, Franzese, Jorgelina, Fraser, Lauchlan, Gonzalez, Sofía, Gusman-Montalvan, Elizabeth, Hernández-Hernández, Rosa Mary, Hölzel, Norbert, Huber-Sannwald, Elisabeth, Jadan, Oswaldo, Jeltsch, Florian, Jentsch, Anke, Ju, Mengchen, Kaseke, Kudzai F., Kindermann, Liana, le Roux, Peter, Linstädter, Anja, Louw, Michelle A., Mabaso, Mancha, Maggs-Kölling, Gillian, Makhalanyane, Thulani P., Issa, Oumarou Malam, Manzaneda, Antonio J., Marais, Eugene, Margerie, Pierre, Hughes, Frederic Mendes, Messeder, João Vitor S., Mora, Juan P., Moreno, Gerardo, Munson, Seth M., Nunes, Alice, Oliva, Gabriel, Oñatibia, Gaston R., Peter, Guadalupe, Pueyo, Yolanda, Quiroga, R. Emiliano, Ramírez-Iglesias, Elizabeth, Reed, Sasha C., Rey, Pedro J., Reyes Gómez, Víctor M., Rodríguez, Alexandra, Rolo, Victor, Rubalcaba, Juan G., Ruppert, Jan C., Sala, Osvaldo, Salah, Ayman, Sebei, Phokgedi Julius, Stavi, Ilan, Stephens, Colton, Teixido, Alberto L., Thomas, Andrew D., Throop, Heather L., Tielbörger, Katja, Travers, Samantha, Undrakhbold, Sainbileg, Val, James, Valkó, Orsolya, Velbert, Frederike, Wamiti, Wanyoike, Wang, Lixin, Wang, Deli, Wardle, Glenda M., Wolff, Peter, Yahdjian, Laura, Yari, Reza, Zaady, Eli, Zeberio, Juan Manuel, Zhang, Yuanling, Zhou, Xiaobing, and Le Bagousse-Pinguet, Yoann

Published
2024
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4. Hotspots of biogeochemical activity linked to aridity and plant traits across global drylands

Author

Eldridge, David J., Ding, Jingyi, Dorrough, Josh, Delgado-Baquerizo, Manuel, Sala, Osvaldo, Gross, Nicolas, Le Bagousse-Pinguet, Yoann, Mallen-Cooper, Max, Saiz, Hugo, Asensio, Sergio, Ochoa, Victoria, Gozalo, Beatriz, Guirado, Emilio, García-Gómez, Miguel, Valencia, Enrique, Martínez-Valderrama, Jaime, Plaza, César, Abedi, Mehdi, Ahmadian, Negar, Ahumada, Rodrigo J., Alcántara, Julio M., Amghar, Fateh, Azevedo, Luísa, Ben Salem, Farah, Berdugo, Miguel, Blaum, Niels, Boldgiv, Bazartseren, Bowker, Matthew, Bran, Donaldo, Bu, Chongfeng, Canessa, Rafaella, Castillo-Monroy, Andrea P., Castro, Ignacio, Castro-Quezada, Patricio, Cesarz, Simone, Chibani, Roukaya, Conceição, Abel Augusto, Darrouzet-Nardi, Anthony, Davila, Yvonne C., Deák, Balázs, Díaz-Martínez, Paloma, Donoso, David A., Dougill, Andrew David, Durán, Jorge, Eisenhauer, Nico, Ejtehadi, Hamid, Espinosa, Carlos Ivan, Fajardo, Alex, Farzam, Mohammad, Foronda, Ana, Franzese, Jorgelina, Fraser, Lauchlan H., Gaitán, Juan, Geissler, Katja, Gonzalez, Sofía Laura, Gusman-Montalvan, Elizabeth, Hernández, Rosa Mary, Hölzel, Norbert, Hughes, Frederic Mendes, Jadan, Oswaldo, Jentsch, Anke, Ju, Mengchen, Kaseke, Kudzai F., Köbel, Melanie, Lehmann, Anika, Liancourt, Pierre, Linstädter, Anja, Louw, Michelle A., Ma, Quanhui, Mabaso, Mancha, Maggs-Kölling, Gillian, Makhalanyane, Thulani P., Issa, Oumarou Malam, Marais, Eugene, McClaran, Mitchel, Mendoza, Betty, Mokoka, Vincent, Mora, Juan P., Moreno, Gerardo, Munson, Seth, Nunes, Alice, Oliva, Gabriel, Oñatibia, Gastón R., Osborne, Brooke, Peter, Guadalupe, Pierre, Margerie, Pueyo, Yolanda, Emiliano Quiroga, R., Reed, Sasha, Rey, Ana, Rey, Pedro, Gómez, Víctor Manuel Reyes, Rolo, Víctor, Rillig, Matthias C., le Roux, Peter C., Ruppert, Jan Christian, Salah, Ayman, Sebei, Phokgedi Julius, Sharkhuu, Anarmaa, Stavi, Ilan, Stephens, Colton, Teixido, Alberto L., Thomas, Andrew David, Tielbörger, Katja, Robles, Silvia Torres, Travers, Samantha, Valkó, Orsolya, van den Brink, Liesbeth, Velbert, Frederike, von Heßberg, Andreas, Wamiti, Wanyoike, Wang, Deli, Wang, Lixin, Wardle, Glenda M., Yahdjian, Laura, Zaady, Eli, Zhang, Yuanming, Zhou, Xiaobing, and Maestre, Fernando T.

Published
2024
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12. Author Correction: Hotspots of biogeochemical activity linked to aridity and plant traits across global drylands

Author

Eldridge, David J., Ding, Jingyi, Dorrough, Josh, Delgado-Baquerizo, Manuel, Sala, Osvaldo, Gross, Nicolas, Le Bagousse-Pinguet, Yoann, Mallen-Cooper, Max, Saiz, Hugo, Asensio, Sergio, Ochoa, Victoria, Gozalo, Beatriz, Guirado, Emilio, García-Gómez, Miguel, Valencia, Enrique, Martínez-Valderrama, Jaime, Plaza, César, Abedi, Mehdi, Ahmadian, Negar, Ahumada, Rodrigo J., Alcántara, Julio M., Amghar, Fateh, Azevedo, Luísa, Ben Salem, Farah, Berdugo, Miguel, Blaum, Niels, Boldgiv, Bazartseren, Bowker, Matthew, Bran, Donaldo, Bu, Chongfeng, Canessa, Rafaella, Castillo-Monroy, Andrea P., Castro, Ignacio, Castro-Quezada, Patricio, Cesarz, Simone, Chibani, Roukaya, Conceição, Abel Augusto, Darrouzet-Nardi, Anthony, Davila, Yvonne C., Deák, Balázs, Díaz-Martínez, Paloma, Donoso, David A., Dougill, Andrew David, Durán, Jorge, Eisenhauer, Nico, Ejtehadi, Hamid, Espinosa, Carlos Ivan, Fajardo, Alex, Farzam, Mohammad, Foronda, Ana, Franzese, Jorgelina, Fraser, Lauchlan H., Gaitán, Juan, Geissler, Katja, Gonzalez, Sofía Laura, Gusman-Montalvan, Elizabeth, Hernández, Rosa Mary, Hölzel, Norbert, Hughes, Frederic Mendes, Jadan, Oswaldo, Jentsch, Anke, Ju, Mengchen, Kaseke, Kudzai F., Köbel, Melanie, Lehmann, Anika, Liancourt, Pierre, Linstädter, Anja, Louw, Michelle A., Ma, Quanhui, Mabaso, Mancha, Maggs-Kölling, Gillian, Makhalanyane, Thulani P., Issa, Oumarou Malam, Marais, Eugene, McClaran, Mitchel, Mendoza, Betty, Mokoka, Vincent, Mora, Juan P., Moreno, Gerardo, Munson, Seth, Nunes, Alice, Oliva, Gabriel, Oñatibia, Gastón R., Osborne, Brooke, Peter, Guadalupe, Pierre, Margerie, Pueyo, Yolanda, Emiliano Quiroga, R., Reed, Sasha, Rey, Ana, Rey, Pedro, Gómez, Víctor Manuel Reyes, Rolo, Víctor, Rillig, Matthias C., le Roux, Peter C., Ruppert, Jan Christian, Salah, Ayman, Sebei, Phokgedi Julius, Sharkhuu, Anarmaa, Stavi, Ilan, Stephens, Colton, Teixido, Alberto L., Thomas, Andrew David, Tielbörger, Katja, Robles, Silvia Torres, Travers, Samantha, Valkó, Orsolya, van den Brink, Liesbeth, Velbert, Frederike, von Heßberg, Andreas, Wamiti, Wanyoike, Wang, Deli, Wang, Lixin, Wardle, Glenda M., Yahdjian, Laura, Zaady, Eli, Zhang, Yuanming, Zhou, Xiaobing, and Maestre, Fernando T.

Published
2024
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22. Agricultural management and pesticide use reduce the functioning of beneficial plant symbionts

Author

Edlinger, Anna, Garland, Gina, Hartman, Kyle, Banerjee, Samiran, Degrune, Florine, García-Palacios, Pablo, Hallin, Sara, Valzano-Held, Alain, Herzog, Chantal, Jansa, Jan, Kost, Elena, Maestre, Fernando T., Pescador, David Sánchez, Philippot, Laurent, Rillig, Matthias C., Romdhane, Sana, Saghaï, Aurélien, Spor, Ayme, Frossard, Emmanuel, and van der Heijden, Marcel G. A.

Published
2022
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24. Plant species accumulation curves are determined by evenness and spatial aggregation in drylands worldwide

Author

DeMalach, Niv, Saiz, Hugo, Zaady, Eli, and Maestre, Fernando T.

Subjects
Quantitative Biology - Populations and Evolution
Abstract

Species accumulation curves (SAC), i.e. the relationship between species richness and the number of sampling units in a given community, can be used to describe diversity patterns while accounting for the well-known scale-dependence of species richness. Despite their value, the functional form and the parameters of SAC, as well as their determinants, have barely been investigated in plant communities, particularly in drylands. We characterized the SAC of perennial plant communities from 233 dryland ecosystems from six continents by comparing the fit of major functions (power-law, logarithmic and Michaelis-Menten). We tested the theoretical prediction that the effects of aridity and soil pH on SAC are mediated by vegetation attributes such as evenness, cover, and spatial aggregation. We found that the logarithmic relationship was the most common functional form, followed by Michaelis-Menten and power-law. Functional form was mainly determined by evenness while the SAC parameters (intercept and slope) were largely determined by spatial aggregation. In addition, aridity decreased small scale richness (intercept of SAC) but did not affect accumulation rate (slope of the SAC). Our results highlight the role that attributes such as spatial aggregation and evenness play as main mediators of the SAC of vegetation in drylands, the Earth's largest biome.

Published
2018

26. Changes in belowground biodiversity during ecosystem development

Author

Delgado-Baquerizo, Manuel, Bardgett, Richard D, Vitousek, Peter M, Maestre, Fernando T, Williams, Mark A, Eldridge, David J, Lambers, Hans, Neuhauser, Sigrid, Gallardo, Antonio, García-Velázquez, Laura, Sala, Osvaldo E, Abades, Sebastián R, Alfaro, Fernando D, Berhe, Asmeret A, Bowker, Matthew A, Currier, Courtney M, Cutler, Nick A, Hart, Stephen C, Hayes, Patrick E, Hseu, Zeng-Yei, Kirchmair, Martin, Peña-Ramírez, Victor M, Pérez, Cecilia A, Reed, Sasha C, Santos, Fernanda, Siebe, Christina, Sullivan, Benjamin W, Weber-Grullon, Luis, and Fierer, Noah

Subjects
Life on Land, Biodiversity, Models, Biological, soil biodiversity, ecosystem development, global scale, acidification, soil chronosequences
Abstract

Belowground organisms play critical roles in maintaining multiple ecosystem processes, including plant productivity, decomposition, and nutrient cycling. Despite their importance, however, we have a limited understanding of how and why belowground biodiversity (bacteria, fungi, protists, and invertebrates) may change as soils develop over centuries to millennia (pedogenesis). Moreover, it is unclear whether belowground biodiversity changes during pedogenesis are similar to the patterns observed for aboveground plant diversity. Here we evaluated the roles of resource availability, nutrient stoichiometry, and soil abiotic factors in driving belowground biodiversity across 16 soil chronosequences (from centuries to millennia) spanning a wide range of globally distributed ecosystem types. Changes in belowground biodiversity during pedogenesis followed two main patterns. In lower-productivity ecosystems (i.e., drier and colder), increases in belowground biodiversity tracked increases in plant cover. In more productive ecosystems (i.e., wetter and warmer), increased acidification during pedogenesis was associated with declines in belowground biodiversity. Changes in the diversity of bacteria, fungi, protists, and invertebrates with pedogenesis were strongly and positively correlated worldwide, highlighting that belowground biodiversity shares similar ecological drivers as soils and ecosystems develop. In general, temporal changes in aboveground plant diversity and belowground biodiversity were not correlated, challenging the common perception that belowground biodiversity should follow similar patterns to those of plant diversity during ecosystem development. Taken together, our findings provide evidence that ecological patterns in belowground biodiversity are predictable across major globally distributed ecosystem types and suggest that shifts in plant cover and soil acidification during ecosystem development are associated with changes in belowground biodiversity over centuries to millennia.

Published
2019

28. The global distribution and environmental drivers of the soil antibiotic resistome

Author

Delgado-Baquerizo, Manuel, Hu, Hang-Wei, Maestre, Fernando T., Guerra, Carlos A., Eisenhauer, Nico, Eldridge, David J., Zhu, Yong-Guan, Chen, Qing-Lin, Trivedi, Pankaj, Du, Shuai, Makhalanyane, Thulani P., Verma, Jay Prakash, Gozalo, Beatriz, Ochoa, Victoria, Asensio, Sergio, Wang, Ling, Zaady, Eli, Illán, Javier G., Siebe, Christina, Grebenc, Tine, Zhou, Xiaobing, Liu, Yu-Rong, Bamigboye, Adebola R., Blanco-Pastor, José L., Duran, Jorge, Rodríguez, Alexandra, Mamet, Steven, Alfaro, Fernando, Abades, Sebastian, Teixido, Alberto L., Peñaloza-Bojacá, Gabriel F., Molina-Montenegro, Marco A., Torres-Díaz, Cristian, Perez, Cecilia, Gallardo, Antonio, García-Velázquez, Laura, Hayes, Patrick E., Neuhauser, Sigrid, and He, Ji-Zheng

Published
2022
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30. Functional rarity and evenness are key facets of biodiversity to boost multifunctionality

Author

Le Bagousse-Pinguet, Yoann, Gross, Nicolas, Saiz, Hugo, Maestre, Fernando T., Ruiz, Sonia, Dacal, Marina, Asensio, Sergio, Ochoa, Victoria, Gozalo, Beatriz, Cornelissen, Johannes H. C., Deschamps, Lucas, García, Carlos, Maire, Vincent, Milla, Rubén, Salinas, Norma, Wang, Juntao, Singh, Brajesh K., and García-Palacios, Pablo

Published
2021

31. Aboveground and belowground biodiversity have complementary effects on ecosystem functions across global grasslands.

Author

Martins, Catarina S. C., Delgado-Baquerizo, Manuel, Jayaramaiah, Ramesha H., Tao, Dongxue, Wang, Jun-Tao, Sáez-Sandino, Tadeo, Liu, Hongwei, Maestre, Fernando T., Reich, Peter B., and Singh, Brajesh K.

Subjects
MICROBIAL diversity, PLANT diversity, PLANT-soil relationships, ARID regions, SOIL biodiversity
Abstract

Grasslands are integral to maintaining biodiversity and key ecosystem services and are under threat from climate change. Plant and soil microbial diversity, and their interactions, support the provision of multiple ecosystem functions (multifunctionality). However, it remains virtually unknown whether plant and soil microbial diversity explain a unique portion of total variation or shared contributions to supporting multifunctionality across global grasslands. Here, we combine results from a global survey of 101 grasslands with a novel microcosm study, controlling for both plant and soil microbial diversity to identify their individual and interactive contribution to support multifunctionality under aridity and experimental drought. We found that plant and soil microbial diversity independently predict a unique portion of total variation in above- and belowground functioning, suggesting that both types of biodiversity complement each other. Interactions between plant and soil microbial diversity positively impacted multifunctionality including primary production and nutrient storage. Our findings were also climate context dependent, since soil fungal diversity was positively associated with multifunctionality in less arid regions, while plant diversity was strongly and positively linked to multifunctionality in more arid regions. Our results highlight the need to conserve both above- and belowground diversity to sustain grassland multifunctionality in a drier world and indicate climate change may shift the relative contribution of plant and soil biodiversity to multifunctionality across global grasslands. Grasslands are integral to maintaining biodiversity and key ecosystem services under climate change. This study combines a global survey of 101 grasslands with a novel microcosm experiment to show that plant and soil microbial diversity independently predict a unique portion of variation in above- and below-ground functioning. [ABSTRACT FROM AUTHOR]

Published
2024
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32. The impact of fungi on soil protist communities in European cereal croplands.

Author

Degrune, Florine, Dumack, Kenneth, Ryo, Masahiro, Garland, Gina, Romdhane, Sana, Saghaï, Aurélien, Banerjee, Samiran, Edlinger, Anna, Herzog, Chantal, Pescador, David S., García‐Palacios, Pablo, Fiore‐Donno, Anna Maria, Bonkowski, Michael, Hallin, Sara, van der Heijden, Marcel G. A., Maestre, Fernando T., Philippot, Laurent, Glemnitz, Michael, Sieling, Klaus, and Rillig, Matthias C.

Subjects
SUSTAINABILITY, SUSTAINABLE agriculture, NUTRIENT cycles, BACTERIAL communities, STRUCTURAL equation modeling, FUNGAL communities
Abstract

Protists, a crucial part of the soil food web, are increasingly acknowledged as significant influencers of nutrient cycling and plant performance in farmlands. While topographical and climatic factors are often considered to drive microbial communities on a continental scale, higher trophic levels like heterotrophic protists also rely on their food sources. In this context, bacterivores have received more attention than fungivores. Our study explored the connection between the community composition of protists (specifically Rhizaria and Cercozoa) and fungi across 156 cereal fields in Europe, spanning a latitudinal gradient of 3000 km. We employed a machine‐learning approach to measure the significance of fungal communities in comparison to bacterial communities, soil abiotic factors, and climate as determinants of the Cercozoa community composition. Our findings indicate that climatic variables and fungal communities are the primary drivers of cercozoan communities, accounting for 70% of their community composition. Structural equation modelling (SEM) unveiled indirect climatic effects on the cercozoan communities through a change in the composition of the fungal communities. Our data also imply that fungivory might be more prevalent among protists than generally believed. This study uncovers a hidden facet of the soil food web, suggesting that the benefits of microbial diversity could be more effectively integrated into sustainable agriculture practices. [ABSTRACT FROM AUTHOR]

Published
2024
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34. Detecting macroecological patterns in bacterial communities across independent studies of global soils.

Author

Ramirez, Kelly S, Knight, Christopher G, de Hollander, Mattias, Brearley, Francis Q, Constantinides, Bede, Cotton, Anne, Creer, Si, Crowther, Thomas W, Davison, John, Delgado-Baquerizo, Manuel, Dorrepaal, Ellen, Elliott, David R, Fox, Graeme, Griffiths, Robert I, Hale, Chris, Hartman, Kyle, Houlden, Ashley, Jones, David L, Krab, Eveline J, Maestre, Fernando T, McGuire, Krista L, Monteux, Sylvain, Orr, Caroline H, van der Putten, Wim H, Roberts, Ian S, Robinson, David A, Rocca, Jennifer D, Rowntree, Jennifer, Schlaeppi, Klaus, Shepherd, Matthew, Singh, Brajesh K, Straathof, Angela L, Bhatnagar, Jennifer M, Thion, Cécile, van der Heijden, Marcel GA, and de Vries, Franciska T

Subjects
Bacteria, DNA, Bacterial, RNA, Ribosomal, 16S, Soil, Ecology, Soil Microbiology, Ecosystem, Biodiversity, Phylogeny, Bacterial Physiological Phenomena, Microbial Interactions, High-Throughput Nucleotide Sequencing, Microbiota, Machine Learning
Abstract

The emergence of high-throughput DNA sequencing methods provides unprecedented opportunities to further unravel bacterial biodiversity and its worldwide role from human health to ecosystem functioning. However, despite the abundance of sequencing studies, combining data from multiple individual studies to address macroecological questions of bacterial diversity remains methodically challenging and plagued with biases. Here, using a machine-learning approach that accounts for differences among studies and complex interactions among taxa, we merge 30 independent bacterial data sets comprising 1,998 soil samples from 21 countries. Whereas previous meta-analysis efforts have focused on bacterial diversity measures or abundances of major taxa, we show that disparate amplicon sequence data can be combined at the taxonomy-based level to assess bacterial community structure. We find that rarer taxa are more important for structuring soil communities than abundant taxa, and that these rarer taxa are better predictors of community structure than environmental factors, which are often confounded across studies. We conclude that combining data from independent studies can be used to explore bacterial community dynamics, identify potential 'indicator' taxa with an important role in structuring communities, and propose hypotheses on the factors that shape bacterial biogeography that have been overlooked in the past.

Published
2018

35. Upper boundary on tree cover at global drylands

Author

Biancari, Lucio, primary, Aguiar, Martín R., additional, Saiz, Hugo, additional, Gross, Nicolas, additional, Le Bagousse‐Pinguet, Yoann, additional, Eldridge, David J., additional, and Maestre, Fernando T., additional

Published
2024
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38. Extreme drought impacts have been underestimated in grasslands and shrublands globally

Author

Smith, Melinda D., primary, Wilkins, Kate D., additional, Holdrege, Martin C., additional, Wilfahrt, Peter, additional, Collins, Scott L., additional, Knapp, Alan K., additional, Sala, Osvaldo E., additional, Dukes, Jeffrey S., additional, Phillips, Richard P., additional, Yahdjian, Laura, additional, Gherardi, Laureano A., additional, Ohlert, Timothy, additional, Beier, Claus, additional, Fraser, Lauchlan H., additional, Jentsch, Anke, additional, Loik, Michael E., additional, Maestre, Fernando T., additional, Power, Sally A., additional, Yu, Qiang, additional, Felton, Andrew J., additional, Munson, Seth M., additional, Luo, Yiqi, additional, Abdoli, Hamed, additional, Abedi, Mehdi, additional, Alados, Concepción L., additional, Alberti, Juan, additional, Alon, Moshe, additional, An, Hui, additional, Anacker, Brian, additional, Anderson, Maggie, additional, Auge, Harald, additional, Bachle, Seton, additional, Bahalkeh, Khadijeh, additional, Bahn, Michael, additional, Batbaatar, Amgaa, additional, Bauerle, Taryn, additional, Beard, Karen H., additional, Behn, Kai, additional, Beil, Ilka, additional, Biancari, Lucio, additional, Blindow, Irmgard, additional, Bondaruk, Viviana Florencia, additional, Borer, Elizabeth T., additional, Bork, Edward W., additional, Bruschetti, Carlos Martin, additional, Byrne, Kerry M., additional, Cahill Jr., James F., additional, Calvo, Dianela A., additional, Carbognani, Michele, additional, Cardoni, Augusto, additional, Carlyle, Cameron N., additional, Castillo-Garcia, Miguel, additional, Chang, Scott X., additional, Chieppa, Jeff, additional, Cianciaruso, Marcus V., additional, Cohen, Ofer, additional, Cordeiro, Amanda L., additional, Cusack, Daniela F., additional, Dahlke, Sven, additional, Daleo, Pedro, additional, D'Antonio, Carla M., additional, Dietterich, Lee H., additional, S. Doherty, Tim, additional, Dubbert, Maren, additional, Ebeling, Anne, additional, Eisenhauer, Nico, additional, Fischer, Felícia M., additional, Forte, T'ai G. W., additional, Gebauer, Tobias, additional, Gozalo, Beatriz, additional, Greenville, Aaron C., additional, Guidoni-Martins, Karlo G., additional, Hannusch, Heather J., additional, Vatsø Haugum, Siri, additional, Hautier, Yann, additional, Hefting, Mariet, additional, Henry, Hugh A. L., additional, Hoss, Daniela, additional, Ingrisch, Johannes, additional, Iribarne, Oscar, additional, Isbell, Forest, additional, Johnson, Yari, additional, Jordan, Samuel, additional, Kelly, Eugene F., additional, Kimmel, Kaitlin, additional, Kreyling, Juergen, additional, Kröel-Dulay, György, additional, Kröpfl, Alicia, additional, Kübert, Angelika, additional, Kulmatiski, Andrew, additional, Lamb, Eric G., additional, Larsen, Klaus Steenberg, additional, Larson, Julie, additional, Lawson, Jason, additional, Leder, Cintia V., additional, Linstädter, Anja, additional, Liu, Jielin, additional, Liu, Shirong, additional, Lodge, Alexandra G., additional, Longo, Grisel, additional, Loydi, Alejandro, additional, Luan, Junwei, additional, Curtis Lubbe, Frederick, additional, Macfarlane, Craig, additional, Mackie-Haas, Kathleen, additional, Malyshev, Andrey V., additional, Maturano-Ruiz, Adrián, additional, Merchant, Thomas, additional, Metcalfe, Daniel B., additional, Mori, Akira S., additional, Mudongo, Edwin, additional, Newman, Gregory S., additional, Nielsen, Uffe N., additional, Nimmo, Dale, additional, Niu, Yujie, additional, Nobre, Paola, additional, O'Connor, Rory C., additional, Ogaya, Romà, additional, Oñatibia, Gastón R., additional, Orbán, Ildikó, additional, Osborne, Brooke, additional, Otfinowski, Rafael, additional, Pärtel, Meelis, additional, Penuelas, Josep, additional, Peri, Pablo L., additional, Peter, Guadalupe, additional, Petraglia, Alessandro, additional, Picon-Cochard, Catherine, additional, Pillar, Valério D., additional, Piñeiro-Guerra, Juan Manuel, additional, Ploughe, Laura W., additional, Plowes, Robert M., additional, Portales-Reyes, Cristy, additional, Prober, Suzanne M., additional, Pueyo, Yolanda, additional, Reed, Sasha C., additional, Ritchie, Euan G., additional, Rodríguez, Dana Aylén, additional, Rogers, William E., additional, Roscher, Christiane, additional, Sánchez, Ana M., additional, Santos, Bráulio A., additional, Cecilia Scarfó, María, additional, Seabloom, Eric W., additional, Shi, Baoku, additional, Souza, Lara, additional, Stampfli, Andreas, additional, Standish, Rachel J., additional, Sternberg, Marcelo, additional, Sun, Wei, additional, Sünnemann, Marie, additional, Tedder, Michelle, additional, Thorvaldsen, Pål, additional, Tian, Dashuan, additional, Tielbörger, Katja, additional, Valdecantos, Alejandro, additional, van den Brink, Liesbeth, additional, Vandvik, Vigdis, additional, Vankoughnett, Mathew R., additional, Guri Velle, Liv, additional, Wang, Changhui, additional, Wang, Yi, additional, Wardle, Glenda M., additional, Werner, Christiane, additional, Wei, Cunzheng, additional, Wiehl, Georg, additional, Williams, Jennifer L., additional, Wolf, Amelia A., additional, Zeiter, Michaela, additional, Zhang, Fawei, additional, Zhu, Juntao, additional, Zong, Ning, additional, and Zuo, Xiaoan, additional

Published
2024
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43. Pushing the limits of C3 intrinsic water use efficiency in Mediterranean semiarid steppes: Responses of a drought‐avoider perennial grass to climate aridification.

Author

Ren, Wei, García‐Palacios, Pablo, Soliveres, Santiago, Prieto, Iván, Maestre, Fernando T., and Querejeta, José Ignacio

Subjects
WATER efficiency, DROUGHTS, STEPPES, GLOBAL warming, PERENNIALS, RAINFALL
Abstract

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Published
2024
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45. Mycorrhizal fungi modulate tree diversity effects on nutrient dynamics

Author

Boenisch, Elisabeth, primary, Blagodatskaya, Evgenia, additional, Dirzo, Rodolfo, additional, Ferlian, Olga, additional, Fichtner, Andreas, additional, Huang, Yuanyuan, additional, Leonard, Samuel J., additional, Maestre, Fernando T., additional, von Oheimb, Goddert, additional, Ray, Tama, additional, and Eisenhauer, Nico, additional

Published
2023
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46. Connecting the multiple dimensions of global soil fungal diversity

Author

Mikryukov, Vladimir, primary, Dulya, Olesya, additional, Zizka, Alexander, additional, Bahram, Mohammad, additional, Hagh-Doust, Niloufar, additional, Anslan, Sten, additional, Prylutskyi, Oleh, additional, Delgado-Baquerizo, Manuel, additional, Maestre, Fernando T., additional, Nilsson, Henrik, additional, Pärn, Jaan, additional, Öpik, Maarja, additional, Moora, Mari, additional, Zobel, Martin, additional, Espenberg, Mikk, additional, Mander, Ülo, additional, Khalid, Abdul Nasir, additional, Corrales, Adriana, additional, Agan, Ahto, additional, Vasco-Palacios, Aída-M., additional, Saitta, Alessandro, additional, Rinaldi, Andrea, additional, Verbeken, Annemieke, additional, Sulistyo, Bobby, additional, Tamgnoue, Boris, additional, Furneaux, Brendan, additional, Duarte Ritter, Camila, additional, Nyamukondiwa, Casper, additional, Sharp, Cathy, additional, Marín, César, additional, Gohar, Daniyal, additional, Klavina, Darta, additional, Sharmah, Dipon, additional, Dai, Dong-Qin, additional, Nouhra, Eduardo, additional, Biersma, Elisabeth Machteld, additional, Rähn, Elisabeth, additional, Cameron, Erin, additional, De Crop, Eske, additional, Otsing, Eveli, additional, Davydov, Evgeny, additional, Albornoz, Felipe, additional, Brearley, Francis, additional, Buegger, Franz, additional, Zahn, Geoffrey, additional, Bonito, Gregory, additional, Hiiesalu, Inga, additional, Barrio, Isabel, additional, Heilmann-Clausen, Jacob, additional, Ankuda, Jelena, additional, Doležal, Jiri, additional, Kupagme, John, additional, Maciá-Vicente, Jose, additional, Djeugap Fovo, Joseph, additional, Geml, József, additional, Alatalo, Juha, additional, Alvarez-Manjarrez, Julieta, additional, Põldmaa, Kadri, additional, Runnel, Kadri, additional, Adamson, Kalev, additional, Bråthen, Kari-Anne, additional, Pritsch, Karin, additional, Tchan Issifou, Kassim, additional, Armolaitis, Kęstutis, additional, Hyde, Kevin, additional, Newsham, Kevin K., additional, Panksep, Kristel, additional, Lateef, Adebola Azeez, additional, Hansson, Linda, additional, Lamit, Louis, additional, Saba, Malka, additional, Tuomi, Maria, additional, Gryzenhout, Marieka, additional, Bauters, Marijn, additional, Piepenbring, Meike, additional, Wijayawardene, Nalin N., additional, Yorou, Nourou, additional, Kurina, Olavi, additional, Mortimer, Peter, additional, Meidl, Peter, additional, Kohout, Petr, additional, Puusepp, Rasmus, additional, Drenkhan, Rein, additional, Garibay-Orijel, Roberto, additional, Godoy, Roberto, additional, Alkahtani, Saad, additional, Rahimlou, Saleh, additional, Dudov, Sergey, additional, Põlme, Sergei, additional, Ghosh, Soumya, additional, Mundra, Sunil, additional, Ahmed, Talaat, additional, Netherway, Tarquin, additional, Henkel, Terry, additional, Roslin, Tomas, additional, Nteziryayo, Vincent, additional, Fedosov, Vladimir, additional, Onipchenko, Vladimir, additional, Yasanthika, Weeragalle Arachchillage Erandi, additional, Lim, Young, additional, Van Nuland, Michael, additional, Soudzilovskaia, Nadejda, additional, Antonelli, Alexandre, additional, Kõljalg, Urmas, additional, Abarenkov, Kessy, additional, and Tedersoo, Leho, additional

Published
2023
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