29,331 results on '"MORPHOMETRICS"'
Search Results
2. An interactive atlas of three-dimensional syndromic facial morphology.
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Aponte, J, Bannister, Jordan, Hoskens, Hanne, Matthews, Harold, Katsura, Kaitlin, Da Silva, Cassidy, Cruz, Tim, Pilz, Julie, Spritz, Richard, Forkert, Nils, Claes, Peter, Bernier, Francois, Klein, Ophir, Katz, David, and Hallgrímsson, Benedikt
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3D facial imaging ,diagnosis ,genetic disease ,human ,morphometrics ,penetrance ,visualization ,Humans ,Face ,Facies ,Phenotype ,Software ,Syndrome - Abstract
Craniofacial phenotyping is critical for both syndrome delineation and diagnosis because craniofacial abnormalities occur in 30% of characterized genetic syndromes. Clinical reports, textbooks, and available software tools typically provide two-dimensional, static images and illustrations of the characteristic phenotypes of genetic syndromes. In this work, we provide an interactive web application that provides three-dimensional, dynamic visualizations for the characteristic craniofacial effects of 95 syndromes. Users can visualize syndrome facial appearance estimates quantified from data and easily compare craniofacial phenotypes of different syndromes. Our application also provides a map of morphological similarity between a target syndrome and other syndromes. Finally, users can upload 3D facial scans of individuals and compare them to our syndrome atlas estimates. In summary, we provide an interactive reference for the craniofacial phenotypes of syndromes that allows for precise, individual-specific comparisons of dysmorphology.
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- 2024
3. Morphophonemic analysis boosts orthographic and semantic learning of academic words for Spanish–English bilinguals.
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Zhang, Jie, Hou, Zhenjie, Kharabi‐Yamato, Lana, Winton, Stephen, Iluore, Azizah Curry, Lee, Grace, Zhang, Huan, and Nam, Rosa
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ORTHOGRAPHY & spelling , *SEMANTICS , *MORPHOLOGY , *MORPHOMETRICS , *ONTOGENY , *VOXEL-based morphometry - Abstract
Background: Upper elementary grade students encounter increasingly complex texts with abundant morphologically complex words. Despite the positive effects of morphology‐based vocabulary instruction, emergent bilinguals with limited word reading skills may need additional support. Methods: This study investigated the effects of morphological analysis and morphophonemic analysis instruction on the orthographic and semantic learning of morphologically complex academic words. Fourth‐ and fifth‐grade Spanish–English bilingual students (N = 30) in the United States participated in two learning tasks. In learning task one, participants learned two sets of carefully matched derivational words under morphological and whole‐word learning conditions. In learning task two, the same participants learned two other sets of words under morphophonemic and whole‐word learning conditions. Each learning task included two learning sessions interweaved by meaning recall and spelling production assessments. Cross‐classified multilevel regression was used to assess the effects of intervention conditions, child and item predictors, as well as cross‐level interactions. Results: Findings showed no significant difference in meaning recall and spelling measures between morphological and whole‐word conditions. Students performed significantly better in the morphophonemic condition than in the whole‐word condition for both meaning and affix spelling outcomes. The effect of morphophonemic intervention over whole word condition was stronger for younger students and words of lower base frequencies. Student meaning and spelling performance was significantly predicted by their word reading skills. Conclusions: Morphophonemic analysis instruction enhances word meaning recall and spelling of complex derivative words. Highlights: What is already known about this topicUpper elementary emergent bilinguals experience challenges in comprehending complex texts largely due to their limited English vocabulary.Morphology‐focused interventions led to generally positive literacy gains among native English speakers and emergent bilinguals. What this paper addsCompared with whole‐word learning, morphophonemic analysis instruction enhanced word meaning recall and spelling of derivative words for bilinguals who were still developing word reading skills.Compared with the whole‐word learning approach, no advantage was observed for the morphology‐focused instruction on word meaning or spelling recall. Implications for theory, policy, or practiceMaking explicit linkages between word decoding and meaning enhances new word learning for emergent bilingual students.Emergent bilingual students with limited word reading skills benefit from additional phonological support in morphology instruction. [ABSTRACT FROM AUTHOR]
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- 2024
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4. A case of cryptic diversity in the bat Hsunycteris thomasi (Lonchophyllinae, Chiroptera): New insights into unrecognized species.
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Benathar, Thayse Cristine Melo, Trevelin, Leonardo Carreira, Carneiro, Jeferson Costa, Rodrigues, Luis Reginaldo Ribeiro, Sampaio, Iracilda, O'Brien, Patricia Caroline, Ferguson‐Smith, Malcolm Andrew, Yangg, Fengtang, Nagamachi, Cleusa Yoshiko, and Pieczarka, Julio César
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BIOLOGICAL classification , *CHROMOSOMAL rearrangement , *GENETIC variation , *CHROMOSOMES , *PHYLOGENY , *PLANT chromosomes - Abstract
Integrating different lines of evidence is currently recognized as the most robust approach to investigating taxonomic questions, particularly those concerning cryptic diversity. In recent years, different sources of evidence have pointed to new cryptic taxa for bats, with the genus Hsunycteris being an excellent study group because of its large karyotypic variability and high genetic divergence revealed by the latest taxonomic and systematic reviews. This study tests the cryptic diversity hypothesis for the Hsunycteris thomasi complex through an integrative approach using species delimitation, phylogenetic analysis, chromosome painting, and linear morphometry. Our results suggest the existence of three lineages for H. thomasi that are morphologically indistinguishable, confirming the two previously described lineages in the literature and adding a third. We argue that the paraphyly in H. thomasi, as reported by previous studies, should be treated as independent species since they have unique evolutionary histories. Finally, we demonstrate that chromosomal and molecular methods are indispensable for recognizing and confirming groups that include cryptic species or species with confusing and controversial taxonomy. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Hybridization and introgression in deeply differentiated salamander species – molecular genetics and a reappraisal of Dr. Louis Vallée's osteological data.
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Arntzen, Jan W.
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MOLECULAR genetics , *SINGLE nucleotide polymorphisms , *HYBRID zones , *GENE flow , *INTROGRESSION (Genetics) - Abstract
Two morphologically and genetically distinct salamander species (the crested newt, Triturus cristatus and the marbled newt, T. marmoratus) engage over a large area in the west of France where they hybridize at ca. 4%. The species interaction is characterized by ecological differentiation and limited gene flow beyond the F1 hybrid generation. Incompletely isolated species like these allow to investigate the genetic mechanisms and evolutionary forces that maintain their identity in the face of ongoing gene flow, to which a large mosaic hybrid zone provides excellent opportunities. A reanalysis of published morphological data supports the partial breakdown of the species barrier whereas extensive genetic data show that introgression is low yet asymmetric, in line with the dynamics of species replacement inferred earlier. The current work, with seven diagnostic nuclear markers studied for a large sample, revises the estimates of introgression in both T. cristatus (to 0.24%) and T. marmoratus (to 0.11%). Difficulties remain in the recognition of potential triploid hybrids versus backcross hybrids. Haldane's rule is partially supported, but deeper analyses require the use of a molecular marker for sex that is not yet available. [ABSTRACT FROM AUTHOR]
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- 2024
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6. The differences in essential facial areas for impressions between humans and deep learning models: An eye‐tracking and explainable AI approach.
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Sano, Takanori, Shi, Jun, and Kawabata, Hideaki
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DEEP learning , *ARTIFICIAL intelligence , *EYE tracking , *SEXUAL dimorphism , *MORPHOMETRICS - Abstract
This study explored the facial impressions of attractiveness, dominance and sexual dimorphism using experimental and computational methods. In Study 1, we generated face images with manipulated morphological features using geometric morphometrics. In Study 2, we conducted eye tracking and impression evaluation experiments using these images to examine how facial features influence impression evaluations and explored differences based on the sex of the face images and participants. In Study 3, we employed deep learning methods, specifically using gradient‐weighted class activation mapping (Grad‐CAM), an explainable artificial intelligence (AI) technique, to extract important features for each impression using the face images and impression evaluation results from Studies 1 and 2. The findings revealed that eye‐tracking and deep learning use different features as cues. In the eye‐tracking experiments, attention was focused on features such as the eyes, nose and mouth, whereas the deep learning analysis highlighted broader features, including eyebrows and superciliary arches. The computational approach using explainable AI suggests that the determinants of facial impressions can be extracted independently of visual attention. [ABSTRACT FROM AUTHOR]
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- 2024
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7. Morphometric measurements of intraoral anatomy in children with Beckwith-Wiedemann syndrome: a novel approach.
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Romeo, Dominic J., George, Andrew M., Sussman, Jonathan H., Banala, Manisha, Wiemken, Andrew, Wu, Meagan, Ng, Jinggang J., Taylor, Jesse A., Schwab, Richard J., Cielo, Christopher M., and Kalish, Jennifer M.
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DAY care centers , *RESPIRATORY obstructions , *DIGITAL photography , *TONGUE , *GLOSSECTOMY - Abstract
Background: An easy-to-use tool to objectively measure intraoral anatomy with meaningful clinical correlations may improve care for patients with Beckwith-Wiedemann syndrome (BWS), who commonly have symptomatic macroglossia. Methods: Children aged 2–17 years with BWS were enrolled between 12/2021 and 01/2024. Digital intraoral photographs with a laser ruler were taken, and morphometric measurements were made using ImageJ software. Relationships between morphometrics and outcomes including BWS clinical score, percentage mosaicism, and incidence of tongue reduction surgery were examined using t-tests and multivariate linear models. Results: Pharyngeal morphometric measurements were obtained in 49 patients with BWS. Mouth area, width, and height differed significantly across BWS molecular subtypes. Right-to-left tongue width and mouth width were larger in those with loss of methylation at imprinting control region 2 (IC2 LOM) than other BWS variants. Patients with paternal uniparental isodisomy of chromosome 11p15 (pUPD11) had narrower mouths than others. Those with tongue reduction surgery had more tongue ridging than those without surgery. There were correlations between mouth area and BWS clinical score, tongue width and BWS clinical score, and tongue length and percentage mosaicism. Conclusion: Intraoral morphometric measurements are associated with phenotypic burden in BWS. Tongue morphology varies across the BWS spectrum, with IC2 LOM having wider tongues and mouths, and pUPD11 having narrower mouths. Tongue ridging is more common in those selected for surgery. Intraoral morphometric measurements may be safely obtained at low costs across centers caring for children with BWS or others at risk of upper airway obstruction. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Multi‐Level Street‐Based Analysis of the Urban Fabric: Developments for a Nationwide Taxonomy.
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Araldi, Alessandro and Fusco, Giovanni
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URBAN research , *URBAN morphology , *MORPHOMETRICS , *PEDESTRIANS , *COMPARATIVE studies - Abstract
Multiple fabric assessment (MFA) is a computer‐aided procedure designed for identifying and characterizing urban fabric types (morphotypes) from a street‐based perspective. Nonetheless, the original MFA presents some limitations: it relies on surface‐based descriptors, conceived as proxy variables for the pedestrian perspective in urban form analysis, rather than direct sight‐based measurements. It also uses building footprint classes as proxies for building types. The spatial statistics on the street network concentrate on patterns of over‐ and under‐represented values, which often results in a limited number of morphotypes. Furthermore, the morphotypes are typically valid only for a specific study area. This article presents the latest methodological advancements in MFA overcoming these four limitations. Its implementation over the eight largest French metropolitan areas successfully distinguishes approximately 20 distinct place‐specific morphotypes, which are further aggregated into a comprehensive multi‐level nested taxonomy. The new MFA procedure allows a nationwide comparative analysis of contemporary urban forms, laying the groundwork for a comprehensive understanding of morphologically regionalized metropolitan areas. Through detailed algorithmic improvements and nationwide implementation, integrating traditional urban morphology with streetscape analysis, MFA provides insights into the analogies and differences of the urban fabric in contemporary metropolitan areas, enabling interoperability with other domains of urban research. [ABSTRACT FROM AUTHOR]
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- 2024
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9. Formation of tributary junction fans of Spiti Valley cold desert, NW Himalaya: morphometric analysis of geomorphology and influencing factors.
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Shoshta, Amit, Marh, Bhupinder S., and Kumar, Sachin
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SEDIMENT transport , *REMOTE sensing , *CAPACITY (Law) , *GEOMORPHOLOGY , *MORPHOMETRICS - Abstract
Morphometric analysis of previously unresearched tributary junction fans (TJFs) of the Spiti valley cold desert, India, was conducted to understand the factors influencing their development. An integrated remote sensing and field approach was employed, including the development of multi-method morphometric indices
viz . fan conicality (FCI ), sweep angle (SA ), fan width-to-length ratio (W/L ), feeder stream-order and valley floor width-to-height ratio (Vf ). Such TJFs, which are the most suitable cultivation and settlement sites in this region, were found to be largely polygenic and planimetrically confined, with many being multi-staged in terms of their development. The results of morphometric analyses reveal that the TJFs are relatively smaller but steeper than their counterparts in other settings, with high relative topographic confinement causing the construction of smaller and steeper fans. The competence of the feeder stream, along with associated processes, notably influences fan morphology using differential sediment transporting capacity. TJFs created by more competent streams are less steep, more influenced by topographic confinement and more vulnerable to truncation by the trunk stream. Furthermore, tectonically induced base-level fall and resultant downcutting in confined environments have caused the formation of truncated, multi-staged and entrenched fans and are primarily responsible for coupling between TJF catchments and trunk stream in the study area. [ABSTRACT FROM AUTHOR]- Published
- 2024
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10. Morphological and Molecular Characterization of Discolaimus haridwarensis sp. n. (Nematoda: Dorylaimida: Qudsianematidae) from India.
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Sharma, Himani, Chaubey, Ashok Kumar, and Álvarez-Ortega, Sergio
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Discolaimus haridwarensis sp. n. is described from agricultural fields of sugarcane in the Haridwar district, India. It is characterized by its 2.11–2.32 mm long body, lip region offset by deep constriction and 27–30 μm wide, odontostyle 20–23 μm long with aperture occupying 50–54% of its length, 436–487 μm long neck, pharyngeal expansion 57–59% of total neck length, uterus a simple tube-like structure 22–31 μm long or 0.3–0.5 times the corresponding body diameter, pars refringens vaginae absent, transverse vulva (V = 48–55), female tail conoid (34–40 µm, c = 53–68, c′ = 1.0–1.3) with rounded terminus, and males absent. The phylogenetic analysis inferred from the D2-D3 expansion segments of 28S rRNA gene and 18S rRNA gene sequences showed that Discolaimus haridwarensis sp. n. clustered with other dorylaimid species from the genus Discolaimus and the subfamily Discolaiminae. [ABSTRACT FROM AUTHOR]
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- 2024
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11. Unveiling the Wing Shape Variation in Northern Altiplano Ecosystems: The Example of the Butterfly Phulia nymphula Using Geometric Morphometrics.
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Acuña-Valenzuela, Thania, Hernández-Martelo, Jordan, Suazo, Manuel J., Lobos, Isabel A., Piñeiro-González, Alejandro, Villalobos-Leiva, Amado, Cruz-Jofré, Franco, Hernández-P, Raquel, Correa, Margarita, and Benítez, Hugo A.
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EXTREME weather , *INSECT morphology , *CLIMATE extremes , *INSECT adaptation , *GEOMETRIC analysis , *EXTREME environments - Abstract
Simple Summary: The Andean Altiplano, known for its extreme weather and high biodiversity, is an ideal place to study how insects adapt to their environment. This research focuses on the butterfly species Phulia nymphula, which is common in the high-altitudinal Andes Mountains, to identify how their wing shapes vary across six locations in the Northern Chilean Altiplano. By analyzing the wings of 77 butterflies, the study found significant differences in wing shape, likely due to local environmental conditions. These differences suggest that the butterflies have adapted to their specific habitats. The findings showed how the wing shape differentiate between localities across the Northern Altiplano and provide insights into how high-altitude species evolve and adapt through changes in their morphology, highlighting the role of ecological and evolutionary processes in shaping biodiversity in extreme environments. The Andean Altiplano, characterized by its extreme climatic conditions and high levels of biodiversity, provides a unique environment for studying ecological and evolutionary adaptations in insect morphology. Butterflies, due their large wing surface compared to body surface, and wide distribution among a geographical area given the flight capabilities provided by their wings, constitute a good biological model to study morphological adaptations following extreme weathers. This study focuses on Phulia nymphula, a butterfly species widely distributed in the Andes, to evaluate wing shape variation across six localities in the Northern Chilean Altiplano. The geometric morphometrics analysis of 77 specimens from six locations from the Chilean Altiplano (Caquena, Sorapata Lake, Chungará, Casiri Macho Lake, Surire Salt Flat, and Visviri) revealed significant differences in wing shape among populations. According to the presented results, variations are likely influenced by local environmental conditions and selective pressures, suggesting specific adaptations to the microhabitats of the Altiplano. The first three principal components represented 60.92% of the total wing shape variation. The detected morphological differences indicate adaptive divergence among populations, reflecting evolutionary responses to the extreme and fragmented conditions of the Altiplano. This study gives insights into the understanding of how high-altitude species can diversify and adapt through morphological variation, providing evidence of ecological and evolutionary processes shaping biodiversity in extreme environments. [ABSTRACT FROM AUTHOR]
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- 2024
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12. <italic>Sychnotylenchus kulinichi</italic> sp. n. (Nematoda: Anguinoidea) from the Primorsky Krai of Russia with a tabular key to the genus <italic>Sychnotylenchus</italic> Rühm, 1956.
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Ryss, Alexander Yu., Chalkin, Andrey A., and Subbotin, Sergei A.
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MAXIMUM likelihood statistics , *BARK beetles , *MOLECULAR phylogeny , *PINUS koraiensis , *PHYLOGENY - Abstract
A new species of the genus
Sychnotylenchus Rühm, 1956,S. kulinchi sp. n., inhabiting the bark beetle galleries ofPityogenes chalcographus inPinus koraiensis was found in the Primorsky Krai of Russia. The new species differs morphologically from the closely related speciesS. yasinskii andS. mayor in having a shorter body length (626-1030vs 1250-1280 and 1935-1455μ m, respectively) and fromS. sparnugus in having a greater value of the ratio between spicule length and tail length (0.9-11vs less than 0.7). Phylogenetic analysis of the partial 18S rRNA, D2-D3 expansion segments of the 28S rRNA, the ITS rRNA andCOI gene sequences showed that the RussianS. kulinichi sp. n. population grouped with populations from Israel and an unspecified locality that were identified incorrectly asDitylenchus forepolitor , which are considered conspecific withS. kulinichi sp. n. in this study. Phylogenetic analyses aiming to clarify the controversial taxonomic status ofNeoditylenchus andSychnotylenchus species indicated that, although the genusSychnotylenchus was paraphyletic in some phylogenetic trees, testing of alternative topologies for the 18S rRNA, D2-D3 of 28S rRNA and ITS rRNA gene trees and datasets using the maximum likelihood method did not exclude the monophyly of this genus and did not justify the validity of the genusNeoditylenchus , which should be considered a junior synonym ofSychnotylenchus as proposed by Fortuner & Maggenti (1987). Molecular phylogeny showed close relationships ofSychnotylenchus with plant-parasitic nematodes from the generaFicotylus ,Orrina andPterotylenchus , and also with the insect-associated genusNeomisticius . A polytomous key listing 24 morphological diagnostic characters for the identification of 33 species ofSychnotylenchus is provided, along with a table listing associated bark beetle species. [ABSTRACT FROM AUTHOR]- Published
- 2024
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13. Morphological and molecular characterisation of <italic>Bursaphelenchus parasaudi</italic> n. sp. (Tylenchina: Aphelenchoididae) found in loblolly pine logs from the USA.
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Gu, Jianfeng, Fang, Yiwu, and Ma, Xinxin
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BIOLOGICAL classification , *LOBLOLLY pine , *VULVA , *BEAKS , *ANUS - Abstract
Bursaphelenchus parasaudi n. sp., isolated in Ningbo, P.R. China, from loblolly pine logs imported from the USA is described. It is characterised by a slim body (a = 32-43), lateral field with four lines, excretory pore located at the level of metacorpus, vulva at 76% of total body length, a distinct vulval flap in lateral view, post-uterine branchca half to two-thirds of the vulva to anus distance long, female tail conical, slightly ventrally curved, with a finely rounded terminus, male spicules with weakly developed rostrum and condylus and cross-striped in their central part, a single precloacal papilla and three pairs of ventro-sublateral papillae. It belongs to theafricanus group of the genusBursaphelenchus and is most similar toB. saudi . Detailed phylogenetic analysis based on the partial 18S region, ITS and 28S D2-D3 region confirmed the status of this nematode as a new species. [ABSTRACT FROM AUTHOR]- Published
- 2024
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14. Paleophylogeography of Notiosorex desert shrews with description of a new species.
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Camargo, Issac, Polly, P David, Álvarez-Castañeda, Sergio Ticul, and Stuhler, John D
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ARID regions , *SHREWS , *MIOCENE Epoch , *MORPHOMETRICS , *FOSSILS - Abstract
The genus Notiosorex is the only group of shrews in North America with adaptations to arid or semiarid zones. The genus was described with a single variable species, Notiosorex crawfordi , from which 5 new species have since been distinguished. To date, the phylogenetic relationships of Notiosorex species have only been partially analyzed and it is possible that there are still distinct species included within the catch-all of N. crawfordi. Here, we use geometric morphometrics on cranial and mandibular characters of the described extant species, 3 fossil species, and a distinctive population of N. crawfordi as a proxy for an integrated assessment of phylogenetic relationships of all Notiosorex species. Our results indicate that the population from the Altiplano Mexicano is more similar to, yet distinct from, N. villai than it is to N. crawfordi —we describe it as a new species. We also used the resulting tree to reconstruct phylogeographic history within the genus, which suggests that Notiosorex sp. nov. N. villai , N. evotis , and N. tataticuli all diverged allopatrically as populations from the ancestral area that is currently occupied by N. crawfordi (and in the deeper past by the fossil species N. harrisi), and pushed south into the Gulf Coast, the Altiplano, and Baja California within the last 5 million years following the end of the Miocene. [ABSTRACT FROM AUTHOR]
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- 2024
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15. The Impact of the Anatolian Diagonal on Biodiversity in Turkey: A Geometric Morphometric Study on the Wing Morphology of Platycnemis dealbata (Insecta: Odonata).
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Salur, A., Miroglu, A., and Akyıldız, G. K.
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INSECTS , *MORPHOMETRICS , *BIODIVERSITY , *MORPHOLOGY , *PROVINCES - Abstract
Present research has shown that zoogeographic barriers can have a significant impact on biodiversity. Türkiye has numerous ecobiological barriers and there has been an increase in research on the impact of the Anatolian diagonal on biodiversity. The objective of this study is to examine the variations in wing morphology of Platycnemis dealbata (Selys and Hagen, 1850) in different populations separated by the Anatolian Diagonal. To achieve this objective, the intraspecies wing variation of three different P. dealbata populations collected from the provinces of Iğdır and Hatay in the east of the Anatolian diagonal and Mersin in the west were investigated using geometric morphometry method. The findings of this study support the idea that the Anatolian diagonal acts as a barrier for P. dealbata populations. [ABSTRACT FROM AUTHOR]
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- 2024
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16. Applying geometric morphometrics in megalopa larval stages: relevance for species distribution and biological invasion studies.
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Díaz-Cruz, Jonah, Fatira, Effrosyni, Tuset, Víctor M., Rodríguez, Adriana, and Landeira, José M.
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SPECIES distribution , *GEOMETRIC analysis , *MORPHOMETRICS , *CRABS , *MORPHOLOGY - Abstract
Larval morphology in brachyuran crabs is an essential trait defining survival in the planktonic environment. The present study describes the morphology (carapace and chelipeds) of megalopa larvae in three different species (Percnon gibbesi, Cronius ruber , and Achelous hastatus) using geometric morphometric analysis (GMA). The study aim was to compare the observed body patterns at interspecific and intraspecific levels. The results showed a marked interspecific distinction of C. ruber larvae based on the rostral region of carapace and cheliped length. We relate these differences to advantages in life performance, as in other animal models, suggesting that larval morphology can be another factor contributing to the invasiveness of C. ruber. At intraspecific level, we found a high morphological similarity between two distant geographical locations, indicating strong genetic connectivity in the populations of P. gibbesi from the Canary Islands. Our findings advance the importance of larval morphology for species performance during the plankton phase that eventually can determine invasiveness in brachyuran crabs. We suggest future studies focusing on the inter-population comparisons of megalopa morphology at larger spatiotemporal scales. [ABSTRACT FROM AUTHOR]
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- 2024
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17. Evaluation of the Spike Diversity of Seven Hexaploid Wheat Species and an Artificial Amphidiploid Using a Quadrangle Model Obtained from 2D Images.
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Komyshev, Evgenii G., Genaev, Mikhail A., Kruchinina, Yuliya V., Koval, Vasily S., Goncharov, Nikolay P., and Afonnikov, Dmitry A.
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IMAGE analysis ,PLANT classification ,WHEAT ,MORPHOMETRICS ,SPECIES - Abstract
The spike shape and morphometric characteristics are among the key characteristics of cultivated cereals, being associated with their productivity. These traits are often used for the plant taxonomy and authenticity of hexaploid wheat species. Manual measurement of spike characteristics is tedious and not precise. Recently, the authors of this study developed a method for wheat spike morphometry utilizing 2D image analysis. Here, this method is applied to study variations in spike size and shape for 190 plants of seven hexaploid (2n = 6x = 42) species and one artificial amphidiploid of wheat. Five manually estimated spike traits and 26 traits obtained from digital image analysis were analyzed. Image-based traits describe the characteristics of the base, center and apex of the spike and common parameters (circularity, roundness, perimeter, etc.). Estimates of similar traits by manual measurement and image analysis were shown to be highly correlated, suggesting the practical importance of digital spike phenotyping. The utility of spike traits for classification into types (spelt, normal and compact) and species or amphidiploid is shown. It is also demonstrated that the estimates obtained made it possible to identify the spike characteristics differing significantly between species or between accessions within the same species. The present work suggests the usefulness of wheat spike shape analysis using an approach based on characteristics obtained by digital image analysis. [ABSTRACT FROM AUTHOR]
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- 2024
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18. Longitudinal Morphometric Changes in the Corticospinal Tract Shape After Hemorrhagic Stroke.
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Boren, Seth B., Savitz, Sean I., Gonzales, Nicole, Hasan, Khader, Becerril-Gaitan, Andrea, Maroufy, Vahed, Li, Yuan, Grotta, James, Steven, Emily A, Chen, Ching-Jen, Sitton, Clark W., Aronowski, Jaroslaw, and Haque, Muhammad E.
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Deep intracerebral hemorrhage (ICH) exerts a direct force on corticospinal tracts (CST) causing shape deformation. Using serial MRI, Generalized Procrustes Analysis (GPA), and Principal Components Analysis (PCA), we temporally evaluated the change in CST shape. Thirty-five deep ICH patients with ipsilesional-CST deformation were serially imaged on a 3T-MRI with a median imaging time of day-2 and 84 of onset. Anatomical and diffusion tensor images (DTI) were acquired. Using DTI color-coded maps, 15 landmarks were drawn on each CST and the centroids were computed in 3 dimensions. The contralesional-CST landmarks were used as a reference. The GPA outlined the shape coordinates and we superimposed the ipsilesional-CST shape at the two-time points. A multivariate PCA was applied to identify eigenvectors associated with the highest percentile of change. The first three principal components representing CST deformation along the left-right (PC1), anterior-posterior (PC2), and superior-inferior (PC3) respectively were responsible for 57.9% of shape variance. The PC1 (36.1%, p < 0.0001) and PC3 (9.58%, p < 0.01) showed a significant deformation between the two-time points. Compared to the contralesional-CST, the ipsilesional PC scores were significantly (p < 0.0001) different only at the first-timepoint. A significant positive association between the ipsilesional-CST deformation and hematoma volume was observed. We present a novel method to quantify CST deformation caused by ICH. Deformation most often occurs in left-right axis (PC1) and superior-inferior (PC3) directions. As compared to the reference, the significant temporal difference at the first time point suggests CST restoration over time. [ABSTRACT FROM AUTHOR]
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- 2024
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19. Seed morphometrics unravels the evolutionary history of grapevine in France.
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Bouby, L., Bonhomme, V., Ivorra, S., Bacilieri, R., Ben Makhad, S., Bonnaire, E., Cabanis, M., Derreumaux, M., Dietsch-Sellami, M. F., Durand, F., Evin, A., Figueiral, I., Flottes, L., Hallavant, C., Jedrusiak, F., Lacombe, T., Marinval, P., Martin, L., Matterne, V., and Pagnoux, C.
- Abstract
The cultivation of grapevines has spanned millennia, leading to thousands of varieties through exchanges, mutations, and crosses between genotypes, as well probably as gene flow from wild populations. These varieties are typically categorized by regional origin and primary use, either for wine production or fruit consumption. France, within the Western European group, hosts many of the world’s renowned wine grape varieties. However, the historical development of cultivated grapevines in France and in the world remains poorly understood. This study applies morphometry on 19,377 charred and waterlogged archaeological grape pips to investigate the evolutionary history of grapevine in France over the last 10,000 years. The study compares seed outlines and lengths, corrected for taphonomic distortions, with a reference collection of 80 wild and 466 modern domestic grapevine accessions. Findings reveal a shift from wild grapevine exploitation to the expansion of domestic varieties around 600–500 BCE, coinciding with Mediterranean cultural influences and the introduction of eastern grape types. The identification of the East-Table group, a group of varieties of eastern origin for fruit consumption, indicates that grapes were also grown for food, especially in Mediterranean regions and near urban areas, alongside wine production. Early French viticulture featured a notable presence of Western European wine-type grapevines. The abundance of pips with wild-like morphology suggests early cultivation involved plants at an initial domestication stage and gene flow between introduced and wild grapevines. As viticulture spread northward, wild and Eastern morphotypes declined, leading to the dominance of Western European wine types in inner France during the Middle Ages. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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20. Hearing abilities of a late‐surviving archaeocete (Cetacea: Kekenodontidae), and implications for the evolution of sound in Neoceti.
- Author
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Corrie, Joshua and Park, Travis
- Subjects
- *
TOOTHED whales , *CETACEA , *OLIGOCENE Epoch , *EOCENE Epoch , *MORPHOMETRICS - Abstract
Kekenodontids are the only known archaeocetes (stem cetaceans) from the late Oligocene. They possess a unique combination of morphological features seen in both more primitive Eocene basilosaurid archaeocetes and more derived Neoceti (mysticetes and odontocetes). However, much remains unknown about the clade, including its acoustic biology. Based on its phylogenetic position crownward to basilosaurids as the latest‐diverging archaeocete, we hypothesize that kekenodontids would be specialized for hearing low‐frequency sounds. Here, we provide the first report on the cochlear anatomy of a kekenodontid using the holotype of Kekenodon onamata from New Zealand. We compare the cochlear morphology of K. onamata to a sample of extinct and extant cetaceans and quantify shape differences using three‐dimensional geometric morphometrics. The analyses show that K. onamata was indeed adapted to hear low frequencies and suggests low‐frequency hearing may be a characteristic of raptorial macrophagous fossil cetaceans in contrast to infrasonic bulk filter‐feeding mysticetes and ultrasonic echolocating odontocetes. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
21. Get unbent! R tools for the removal of arching and bending in fish specimens for geometric morphometric shape analysis.
- Author
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Arbour, Jessica Hilary
- Subjects
- *
POSTURE , *GEOMETRIC shapes , *MORPHOMETRICS , *DATA analysis , *MORPHOLOGY - Abstract
Geometric morphometrics is a powerful tool for studying fish body shape; however, body posture can be a hindrance to these analyses. Here I introduce new R language tools for correcting multiple types of bending of 3D data based on the TPS suite (geometric morphometric software) “unbend specimens” methodology. In a sample dataset of darters, these R tools adequately accounted for posture artifacts otherwise evident across multiple principal component axes. I hope these new tools will facilitate the incorporation of 3D landmark data into the comparative analysis of fish body shape. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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22. Carapace Morphology Variations in Captive Tortoises: Insights from Three-Dimensional Analysis.
- Author
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Eravci Yalin, Ebru, Gündemir, Ozan, Günay, Ebuderda, Vatansever Çelik, Ezgi Can, Duro, Sokol, Szara, Tomasz, Blagojevic, Milos, Sönmez, Bektaş, and Spataru, Mihaela-Claudia
- Subjects
- *
VETERINARY medicine , *PRINCIPAL components analysis , *GEOMETRIC analysis , *TESTUDINIDAE , *MORPHOMETRICS - Abstract
Simple Summary: This study explored the morphological differences in the carapaces of three tortoise species—Leopard tortoises (Stigmochelys pardalis), African spurred tortoises (Centrochelys sulcata), and Greek tortoises (Testudo graeca)—raised in captivity in Türkiye. Using 3D scanning and geometric morphometric analysis, we identified the vital shape variations and dimensional features across species. Principal component analysis revealed that PC1 and PC3 were significant in distinguishing species, with Leopard tortoises showing higher carapace shapes and African spurred tortoises having shorter carapaces. An allometric effect indicated that smaller tortoises had higher shells. These findings provide valuable insights for taxonomy and clinical practice, emphasizing the need to consider shape variations in tortoise care and species identification. The carapace morphology of tortoises is a crucial characteristic used for species identification, with features such as shell shape, roughness, and color patterns varying among species. Understanding this morphological diversity is valuable not only for taxonomic classification but also for more specialized clinical approaches. This study investigated the morphological differences in the shells of Leopard tortoises (Stigmochelys pardalis), African spurred tortoises (Centrochelys sulcata), and Greek tortoises (spur-thighed tortoises; Testudo graeca) raised in captivity. Using 3D scanners, the carapaces were modeled, and a 3D geometric morphometric method was employed to analyze shape variations and dimensional features, with landmarks applied automatically. Among the species studied, African spurred tortoises had the largest carapace size. Principal component analysis (PCA) identified PC1 and PC3 as critical factors in distinguishing between species based on morphological characteristics. Positive PC1 values, associated with a shorter carapace height, indicated a flatter or more compact shell shape. A higher PC3 value corresponded to a raised shape at the back of the shell, while a lower PC3 value indicated a raised shape at the front. Specifically, Leopard tortoises exhibited a higher carapace shape than the other species, while African spurred tortoises had shorter carapaces. An allometric effect was observed in the carapaces, where smaller specimens tended to be proportionately higher-domed, whereas larger shells displayed a lower height in shape. These findings highlight the significance of shape variations in tortoise shells, which emerge during adaptation and have important implications for taxonomy and clinical practice. Such differences should be carefully considered in veterinary care and species identification. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
23. Generating novel tennis racket shape concepts using a theoretical morphospace.
- Author
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Grant, Robyn A., Bonhomme, Vincent, and Allen, Tom
- Subjects
- *
TENNIS rackets , *TENNIS , *PRINCIPAL components analysis , *SPORTING goods , *MORPHOMETRICS - Abstract
Statistical shape analysis, or morphometrics, is a technique commonly used in evolutionary biology to summarise a population of samples. Theoretical morphometrics extends the current population of samples into a theoretical space. Using the lawn tennis racket as an example, this paper showcases the potential of morphometrics as a tool for inspiring design concepts for novel sporting goods. It showcases how morphometrics can be applied to summarise the shape of a sample of rackets and applies theoretical morphometrics to systematically present new candidate designs that fall outside of the inputted existing, racket population. The input population was 514 tennis rackets dating back to the origins of the game. The shape analysis was performed on "front-on" silhouette images of the rackets using the R Package Momocs. The outline shape of each racket was reconstructed using the elliptical Fourier transform curve fitting technique. A principal component analysis performed on the reconstructed outlines showed that >90% of the variance in the shape of the rackets was captured by the first two principal components. An evenly spaced grid of theoretical racket shape outlines was then created in a principal component 2 vs. principal component 1 "morphospace". The limits of this space were then expanded to give a theoretical morphospace that extended beyond the range of the first two principal components for the 514 samples. We propose that the shapes located within such a theoretical morphospace could inspire designers and help them to systematically identify candidates for novel products. Specifically, we suggest that experimenting with wide-angled throats and heads with angled sides might be an interesting starting point for exploring future tennis racket design concepts. The novel technique presented here could be used by a sporting goods brand during the ideation phase of product development to schematically summarise current designs and identify candidates for new ones. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
24. The deeper the rounder: body shape variation in lice parasitizing diving hosts.
- Author
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Leonardi, María Soledad, Paz, Rodrigo R., Oliveira, Hugo Luiz, Lazzari, Claudio R., Negrete, Javier, and Márquez, Federico
- Subjects
- *
HYDROSTATIC pressure , *INSECT adaptation , *LICE , *LOW temperatures , *PINNIPEDIA - Abstract
Seal lice, unique among insects, show remarkable adaptability to the extreme conditions of the deep sea. Evolving with their seal and sea lion hosts, they have managed to tolerate hypoxia, high salinity, low temperature, and elevated hydrostatic pressure. Given the diving capabilities of their mammalian hosts, which can reach depths of hundreds to thousands of meters, our study examines the morphological variation among closely related seal lice species infesting hosts with different maximum diving depths. In particular, our research reveals a significant morphological difference between lice associated with regular and deep-diving hosts, where lice from deep-diving hosts tend to be rounder. This could be an adaptation to withstand the high hydrostatic pressures found in the deep ocean. The rounded shape optimizes the louse's ability to withstand external pressure by redistributing it over a larger ventral/dorsal plane. This in turn minimizes the internal energy required to support body deformations, thereby increasing the louse's resilience in the deep sea environment. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
25. On-demand mitral valve morphometrics during surgical repair.
- Author
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Grizelj, Andela, Sharan, Lalith, Karck, Matthias, De Simone, Raffaele, Romano, Gabriele, and Engelhardt, Sandy
- Subjects
MITRAL valve ,MORPHOMETRICS ,AUGMENTED reality ,CARDIAC surgery ,AORTA surgery - Abstract
Mitral valve regurgitation is one of the most common heart valve diseases that can occur when the structural composition of the mitral valve is affected. Mitral valve repair, typically performed in a minimally invasive setting, is a complex surgery that aims to reinstate the structural integrity of the valve and thereby restore normal valve function. The current practice lacks quantification of geometrical changes and interactive 3D visualization that could enhance the understanding of pathomorphological changes and impact of surgical correction. This work presents functionalities from smartMVR, a quantitative tool to measure, compare, and analyse changes in mitral valve geometry from data captured on-demand using an RGB-D camera. The feasibility of the approach is demonstrated on a silicone replica of a pathological mitral valve that is iteratively corrected using common surgical techniques. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
26. Worldwide Research on Australopiths.
- Author
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Guil-Guerrero, José Luis and Manzano-Agugliaro, Francisco
- Subjects
- *
AUSTRALOPITHECINES , *MORPHOMETRICS , *PARANTHROPUS , *FOSSILS , *PALEONTOLOGY - Abstract
Australopiths are a group of early human ancestors that lived approximately 4 to 2 million years ago and are considered a key transitional form between apes and humans. Studying australopiths can help to understand the evolutionary processes that led to the emergence of humans and gain insights into the unique adaptations and characteristics that set humans apart from other primates. A bibliometric-based review of publications on australopiths contained in the Scopus database was conducted, analyzing approximately 2000 of them. The main authors, institutions, and countries researching this subject were identified, as well as their future development. The connections between authors, countries, and research topics were also analyzed through the detection of communities. The more frequent keywords in this subject are hominid, animal, human, South Africa, and Australopithecus afarensis. Four main research clusters were identified in the field of australopiths: palaeobiology, cranial evolution, locomotion, and mandible evolution and morphometry. The most important countries in terms of collaboration networks are South Africa, the UK, France, and Germany. Research on australopiths is ongoing, and new research clusters are expected to emerge, such as those focused on pre-australopiths and the molecular evolution and taxonomy of australopiths. Overall, this work provides a comprehensive overview of the state of research on australopiths and offers insights into the current direction of the field. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
27. Oleaxonchium olearum gen. et sp. nov. (Nematoda, Dorylaimida) associated with an olive grove in the southern Iberian Peninsula, and new insights into the evolutionary relationships within Belondiridae.
- Author
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Peña-Santiago, Reyes, García-Ruiz, Miriam, Ruiz-Cuenca, Alba N., and Abolafia, Joaquín
- Subjects
- *
GENITALIA , *VULVA , *UTERUS , *MORPHOMETRICS , *NEMATODES - Abstract
A new belondirid, dorylaimid taxon, Oleaxonchium olearum gen. et sp. nov., collected from an olive grove in the Andalusia region of Spain, is characterised, including its morphological description, morphometrics, SEM study, and molecular (18S-, 28S-rDNA) analyses. The new genus displays a unique combination of traits that distinguishes it from its closest genera: a rectangular lip region with sclerotized margins when observed in lateral view and visibly hexagonal in face view under SEM; a comparatively long cheilostom with thickened walls at its anterior part; a short isthmus-like section separating both pharyngeal regions; a mono-opistho-ovarian didelphic female genital system without pars refringens vaginae; and a short and rounded tail. The new species is characterised by its 2.44–2.87 mm long body, lip region 7–7.5 µm wide, odontostyle 10–10.5 µm long, neck 723–973 µm long, pharyngeal expansion occupying 63–72% of the total neck length, female anterior genital branch 4–6% of body length, tripartite posterior uterus 1.9–2.6 body diameters long, with a short intermediate section bearing sclerotized elements, vulva (V = 58–61) a transverse slit, caudal region 29–35 µm long (c = 74–89, c' = 0.9–1.1), and male unknown. As derived from an integrative approach combining morphological and molecular data, the new genus is close to Metaxonchium, the polyphyly of Belondiridae is confirmed, and support is provided in favour of the monophyly of Axonchiinae. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
28. What does external morphometry tell us about stock discrimination of Sardina pilchardus stocks from Türkiye?
- Author
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Ozpicak, Melek and Saygin, Semra
- Subjects
- *
PRINCIPAL components analysis , *DISCRIMINANT analysis , *MULTIVARIATE analysis , *SARDINES , *MORPHOMETRICS - Abstract
The analysis of shape is a fundamental part of much biological research. Morphometrics, which incorporates concepts from biology, geometry, and statistics, is the study of the geometrical form of organisms. In addition, morphometric characteristics can be used to differentiate 'phenotypic stocks' as groups with similar growth, mortality, and reproductive rates. In this study, 25 morphometric characters were used to discriminate European pilchard (Sardina pilchardus) stocks from Türkiye. Intraspecific variation of the European pilchard was investigated based on morphometric characters. Samples were collected from the Aegean Sea (AS; N = 54), the Sea of Marmara (MS; N = 50) and the Mediterranean Sea (MEDS; N = 50) during the 2019 fishing season. Principal Component Analysis (PCA) and Canonical Discriminant Analysis (CDA) were used for stock discrimination of the European pilchard. Univariate statistics (ANOVA) showed that 24 of the 25 measurements differed significantly between samples to a varying degree (p < 0.001). According to CDA, an overall classification success rate of 87.7% was achieved using 12 morphometric parameters. All samples were clearly separated from each other in the discriminant space, suggesting that there was no strong intermingling between populations. In addition, we would like to conclude that the morphological difference is not at the genetic level, and would like to emphasize the need for additional stock discrimination methods. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
29. První zkušenosti s morfometrií mozkové tkáně s využitím umělé inteligence u neurodegenerativních onemocnění.
- Author
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Šuto, Lovre, Ferda, Jiří, and Tupý, Radek
- Subjects
- *
CEREBRAL atrophy , *NEURODEGENERATION , *ARTIFICIAL intelligence , *MORPHOMETRICS , *MAGNETIC resonance - Abstract
Brain tissue morphometry further improves the radiologist’s assessment of brain atrophy. Conventional programs using this method are of limited use in normal practice due to their relatively long calculation time. Artificial intelligence, thanks to its speed, enables the routine use of morphometrics. Because the technology is relatively new, its contribution in day-to-day diagnostics has not yet been clearly determined. This text summarizes our initial experience with this method on a pilot cohort of patients with neurodegenerative diseases and describes those advantages and limitations which became apparent during our usage of the program. [ABSTRACT FROM AUTHOR]
- Published
- 2024
30. Comparative Shape of Two Recently Diverged Species of Pacific Rockfish: Sebastes ciliatus and S. variabilis.
- Author
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Smith, Jonah, Sorensen, Michael, Shiozawa, Dennis K., and Belk, Mark C.
- Subjects
- *
SYMPATRIC speciation , *STRIPED bass , *GEOMETRIC shapes , *GENETIC speciation , *MORPHOMETRICS - Abstract
Species delimitation can be based on the consideration of several different criteria, including the differentiation of ecological or functional traits. Two species of Pacific rockfish, the dark rockfish (Sebastes ciliatus) and the dusky rockfish (Sebastes variabilis), appear to represent recently divergent evolutionary lineages. We evaluate evidence for the differentiation of these two species in somatic shape using geometric morphometrics at two locations in the northeast Pacific where they occur in sympatry. The somatic shape was significantly different between species, but the species' shape did not vary between the two locations. Sebastes ciliatus had an upturned and relatively smaller head, eye, and jaw, and an elongated midbody, whereas S. variabilis had a downturned and larger head, eye, and jaw, and a shorter midbody. These results suggest that S. ciliatus and S. variabilis are morphometrically differentiated in a similar way in both locations. The somatic shape differentiation between these two sympatric species is similar to genus-wide patterns of somatic shape differentiation. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
31. First Virtual Reconstruction of a Mosasaurid Brain Endocast: Description and Comparison of the Endocast of Tethysaurus nopcsai with Those of Extant Squamates.
- Author
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Allemand, Rémi, Polcyn, Michael J., Houssaye, Alexandra, Vincent, Peggy, López-Aguirre, Camilo, and Bardet, Nathalie
- Subjects
- *
SQUAMATA , *MORPHOMETRICS , *SNAKES , *FLEXURE , *TOMOGRAPHY - Abstract
Paleoneurological studies of mosasaurids are few and limited to old partial reconstructions made from latex casts on Platecarpus and Clidastes. Here, the brain endocasts of three specimens of the early mosasaurid Tethysaurus nopcsai from the Turonian of Morocco are reconstructed for the first time by using micro-computed tomography. Comparisons between Tethysaurus and the later Platecarpus and Clidastes show that distinct endocranial organizations have occurred within the clade through time, including differences in the flexure of the endocast and the size of the parietal eye. The physiological consequences of such variability remain unclear and further investigations are required to better interpret these variations. In addition, the endocast of Tethysaurus was compared to those of extant anguimorphs, iguanians, and snakes, using landmark-based geometric morphometrics. The results revealed that Tethysaurus exhibits a unique combination of endocranial features compared to extant toxicoferans. Contrary to previous statements, we find no strong resemblance in endocast morphology between Tethysaurus and varanids. Rather, the endocast of Tethysaurus shows some morphological similarities with each of the clades of anguimorphs, iguanians, and snakes. In this context, while a notable phylogenetic signal is observed in the variability of squamate endocasts, it is premature to establish any phylogenetic affinities between mosasaurids and extant squamates based solely on endocast morphologies. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
32. Anatomical study of pericardioperitoneal canal in immature beluga (Huso huso) with ultrasonography.
- Author
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Zehtabvar, Omid, Vajhi, AliReza, Masoudifard, Majid, Davudypoor, Somaye, and Tonekabony, Seyyed Hossein Modarres
- Subjects
- *
PERICARDIUM , *PERITONEUM , *PECTORAL fins , *ULTRASONIC imaging , *MORPHOMETRICS - Abstract
Background: One of the special anatomical structures in sturgeons is the pericardioperitoneal canal (PPC), which has not been studied much. Considering that the presence and absence of this channel and its morphometry have not been investigated in this type of fish, this study was conducted. Objective: The purpose of present study was to obtain a complete understanding about anatomical features and ultrasonography of PPC in the heart of immature beluga species in order to provide standard approaches for performing sonography and echocardiography on this sturgeon species. Methods: Ten immature belugas (Huso huso) were used to perform ultrasonography with Sonosite MicroMaxx ultrasonography machine of ventral approach between two pectoral fins. After performing the steps of ultrasonographic study, gross anatomical studies were also performed, and the morphometric measurement of the canal was also performed. Results: A small PPC was observed, which communicated between the pericardial cavity, and the peritoneal (coelomic) cavity. The cranial part of this channel, which was located immediately after the transverse septum, was on the midline of the body and was seen in midsagittal ultrasonograms. On average, the length of this canal was 3.23 ± 0.05 cm, and its diameter (cranial part) was 0.24 ± 0.04 cm. Conclusions: In the present study on immature beluga, it was observed that the canal is located behind the sinus venosus and is caudoventral to it, though behind the transverse septum. It has been mentioned that this PPC establishes a connection between the pericardial cavity and the peritoneal cavity, so this connection is between the peritoneal cavity and the space between the two layers of the pericardium and has no connection with the pericardial sac (the space where the heart is located). In this study, the anatomical structure and morphometry of the PPC in immature beluga were investigated, and some approaches were presented to observe the canal in ultrasonography. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
33. Harpy eagle kill sample provides insights into the mandibular ontogenetic patterns of two-toed sloths (Xenarthra: Choloepus).
- Author
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Pasin, Lucas C., Casali, Daniel M., Semedo, Thiago B. F., and Garbino, Guilherme S. T.
- Subjects
- *
MANDIBLE , *LAZINESS , *MORPHOMETRICS , *EAGLES , *ALLOMETRY - Abstract
Skeletal ontogeny of xenarthrans is poorly known, especially because of the paucity of study specimens from distinct developmental stages. Here, we investigate morphometric aspects of the mandible ontogeny in the two-toed sloths, Choloepus spp. We examined mandibles of infant, juveniles and subadult sloths that were present in kill assemblages of harpy eagles, Harpia harpyja, and complemented our study with adult museum specimens. We carried out uni- and multivariate linear morphometric analyzes to assess the growth pattern of the mandible. Harpy eagles did not prey on adult two-toed sloths, preferring younger individuals. We found an overall strong correlation between the total length of the mandible and other mandibular measurements across age classes, with some of them scaling isometrically, and others presenting allometric growth. Also, morphometric data correlated with patterns of symphysial fusion across ontogenetic stages, rendering the latter a reliable indicator of the animal's age category. Although it was necessary to complement our sample with museum material, individuals obtained from the harpy eagle kill assemblage proved to be a valuable complementary source of specimens to be studied. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
34. Post-mortem examinations of New Zealand birds. 3. Shining cuckoos (Chrysococcyx lucidus Aves: Cuculinae).
- Author
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Gill, Brian J.
- Subjects
- *
PREDATORY insects , *AUTOPSY , *BIRD migration , *GASTROINTESTINAL contents , *LEPIDOPTERA , *LADYBUGS , *CATERPILLARS - Abstract
I examined 107 shining cuckoos that died accidentally in the northern North Island, New Zealand, during 39 years. Birds arriving on migration in spring were all in adult plumage. Juveniles occurred mainly from January to March. The sex-ratio of adults was 1:1. In several measurements, females were slightly larger than males on average, and adults slightly larger than juveniles. Gonad size suggested readiness for breeding from September to January (inclusive). Ninety-one gizzards held a total of 3754 arthropod food items. Insects (10 orders) made up around 94% of items and just two orders accounted for 79% of food items: caterpillars (larval Lepidoptera, 55%) and beetles (Coleoptera, 24%). 'Spiny' caterpillars made up roughly 8% of total caterpillars. Ladybirds (Coccinellidae) made up 21% of beetles. Shining cuckoos ate small prey, mostly 1–10 mm long (44%) and 11–20 mm long (43%). By eating hairy caterpillars and ladybirds, shining cuckoos exert predatory control on insects that other birds avoid. By gorging (up to 258 insects per stomach) the cuckoo might dampen the impact of herbivorous insects (e.g. caterpillar infestations) on plants. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
35. Cognitive Polygenic Index is Associated with Occupational Complexity over and above Brain Morphometry.
- Author
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Tsapanou, A., Mourtzi, N., Gu, Y., Belsky, D.W., Barral, S., Habeck, C., and Stern, Yaakov
- Subjects
- *
BRAIN cortical thickness , *JOB titles , *REGRESSION analysis , *MORPHOMETRICS , *COGNITION - Abstract
Although the impact of occupation on cognitive skills has been extensively studied, there is limited research examining if genetically predicted cognitive score may influence occupation. We examined the association between Cognitive Polygenic Index (PGI) and occupation, including the role of brain measures. Participants were recruited for the Reference Ability Neural Network and the Cognitive Reserve studies. Occupational complexity ratings for Data, People, or Things came from the Dictionary of Occupational Titles. A previously-created Cognitive PGI and linear regression models were used for the analyses. Age, sex, education, and the first 20 genetic Principal Components (PCs) of the sample were covariates. Total cortical thickness and total gray matter volume were further covariates. We included 168 white-ethnicity participants, 20–80 years old. After initial adjustment, higher Cognitive PGI was associated with higher Data complexity (B=-0.526, SE = 0.227, Beta= -0.526 p = 0.022, R2 = 0.259) (lower score implies higher complexity). Associations for People or Things were not significant. After adding brain measures, association for Data remained significant (B=-0.496, SE: 0.245, Beta= -0.422, p = 0.045, R2 = 0.254). Similarly, for a further, fully-adjusted analysis including all the three occupational complexity measures (B=-0.568, SE = 0.237, Beta= -0.483, p = 0.018, R2 = 0.327). Cognitive genes were associated with occupational complexity over and above brain morphometry. Working with Data occupational complexity probably acquires higher cognitive status, which can be significantly genetically predetermined. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
36. Replicated Functional Evolution in Cichlid Adaptive Radiations.
- Author
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Martinez, Christopher M., Corn, Katherine A., Williamson, Sarah, Satterfield, Darien, Roberts-Hugghis, Alexus S., Barley, Anthony, Borstein, Samuel R., McGee, Matthew D., and Wainwright, Peter C.
- Subjects
- *
ADAPTIVE radiation , *BIOLOGICAL evolution , *CICHLIDS , *MORPHOMETRICS , *RADIATION - Abstract
Adaptive radiations highlight the mechanisms by which species and traits diversify and the extent to which these patterns are predictable. We used 1,110 high-speed videos of suction feeding to study functional and morphological diversification in 300 cichlid species from three African Great Lake radiations of varying ages (Victoria, Malawi, and Tanganyika) and an older, spatially dispersed continental radiation in the Neotropics. Among African radiations, standing diversity was reflective of time. Morphological and functional variance in Lake Victoria, the youngest radiation, was a subset of that within Lake Malawi, which itself was nested within the older Tanganyikan radiation. However, functional diversity in Neotropical cichlids was often lower than that in Lake Tanganyika, despite being much older. These two radiations broadly overlapped, but each diversified into novel trait spaces not found in the youngest lake radiations. Evolutionary rates across radiations were inversely related to age, suggesting extremely rapid trait evolution at early stages, particularly in lake radiations. Despite this support for early bursts, other patterns of trait diversity were inconsistent with expectations of adaptive radiations. This work suggests that cichlid functional evolution has played out in strikingly similar fashion in different radiations, with contingencies eventually resulting in lineage-specific novelties. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
37. Correlating male white‐tailed deer antler size with female body mass across multiple spatial scales.
- Author
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Turner, Mark A., Harper, Craig A., Strickland, Bronson K., Lashley, Marcus A., Wilber, Mark Q., and McKinley, William
- Subjects
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BODY size , *ANIMAL populations , *ANTLERS , *UNGULATES , *ADULTS , *WHITE-tailed deer - Abstract
Managers use morphometric data collected from harvested animals as indicators of nutritional condition. Antler or horn size often are considered in ungulates, but there are problems associated with biased and limited harvest data available from male animals in many populations. Adult female body mass also may be collected, but little information exists on how male antler size scales with female body mass. We evaluated the relationship between property‐specific mature male white‐tailed deer (Odocoileus virginianus) antler size and adult female body mass from harvest data collected at 2 spatial scales. Regression predicted a 4.4‐cm increase in average mature male antler size for every 1‐kg increase in female body mass from 31 properties across the eastern United States, 2015–2023. Adult female mass explained 64% of the variation in mature antler size, and including latitude as a covariate did not improve model fit. When we considered data from 174 properties in Mississippi, USA, 1991–1994, we predicted a 4.7‐cm increase in average mature male antler size for every 1‐kg increase in adult female body mass. Including soil resource region in the Mississippi model explained 48% of the variation in mature male antler size by accounting for differences in average sizes across regions. Our results indicate average female body mass correlates with mature male antler size at multiple spatial scales. We recommend managers collect body mass and age from harvested female deer, as female mass represents a useful metric to track management progress and predict changes in antler size. [ABSTRACT FROM AUTHOR]
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- 2024
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38. A global review of white shark (Carcharodon carcharias) parturition.
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O'Connell, Craig P., Dodd, Jon F., Crews, Julia, Gressle, Juliet, Racicot, Breanna, Sitzer, Steven, Lis, Timothy, and Skomal, Gregory B.
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WHITE shark , *HABITAT conservation , *FISHERIES , *TOP predators , *WATER depth - Abstract
The white shark (Carcharodon carcharias) is a globally distributed top predator. Due to its ecological importance and historical declining population trends, data contributing to conservation initiatives (e.g. habitat protections and resource management) pertaining to all life stages of this species are essential to facilitate population recovery. Of particular interest, the locations and discrete seasonality of C. carcharias parturition remain uncertain. Understanding C. carcharias parturition in relation to each population is relevant to population recovery since neonate to young-of-the-year (YOY) sharks are more vulnerable to predation and particularly threatened by and susceptible to commercial fishing pressure. Herein, this paper provides a synthesis from published literature across seven well-studied C. carcharias populations to identify common trends associated with parturition location, seasonality, and habitat characteristics. The data reviewed in this study are consistent with previous population-specific hypotheses, that C. carcharias parturition occurs during spring and summer for all populations. Further, this review also indicates that parturition likely occurs in insular shelf waters and water temperatures ranging from15.7 to 23.1 °C. Although discrete parturition sites were not identified, the compiled data are suggestive that C. carcharias parturition may occur over horizontal and vertical spatial scales that exceed the inshore, shallow water environments associated with nursery area habitat to perhaps minimize predation by conspecifics. Due to the vulnerability of C. carcharias, conducting non-lethal technological (e.g., baited remote underwater video systems—BRUVS), morphological (i.e., ontogenetic changes in dorsal fin shape), and reproductive (e.g., blood chemistry and ultrasonography) research that may help identify parturition location and seasonality are thus warranted. [ABSTRACT FROM AUTHOR]
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- 2024
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39. The morphometry of distal tibia and posterior malleolus and its clinical implications in total ankle prosthesis.
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Ülkir, Mehmet, Akdemir Aktaş, Hilal, Yılmaz, Mehmet, and Günenç Beşer, Ceren
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TOTAL ankle replacement , *TURKS , *INTRACLASS correlation , *TIBIA , *MORPHOMETRICS - Abstract
Purpose: The aim of this study is to reveal the morphometry of the distal tibia and posterior malleolus and to generate morphometric reference data for the tibial component of total ankle prosthesis. Methods: This study was performed on 121 human dry tibiae (47 right, 74 left). The morphometric measurements of distal tibial structures, tibial length and the distance between the medial and posterior malleolus were measured in this study. Measurements on 44 tibiae were repeated three times and averaged for minimizing intra-observer error. Results: The tibial length was found 34.19 ± 2.31 cm. Mean values of width of fibular notch at tibial plafond and 10 mm proximal to the tibial plafond were 25.71 ± 2.44 mm and 17.81 ± 2.46 mm, respectively. Mean depth of fibular notch at tibial plafond and 10 mm proximal to the tibial plafond were 3.60 ± 1.04 mm and 3.37 ± 1.24 mm, respectively. Mean height of fibular notch was found 48.21 ± 10.51 mm. Mean width and height of medial malleolus were 25.08 ± 2.13 mm and 14.73 ± 1.85 mm, respectively. Mean width and length of tibial plafond were 27.71 ± 2.74 mm and 26.96 ± 2.62 mm, respectively. Mean values of width and height of posterior malleolus were measured 21.41 ± 3.26 mm and 6.74 ± 1.56 mm, respectively. Mean distance between medial and posterior malleolus was found 37.17 ± 3.53 mm. Mean width and depth of malleolar groove were 10.26 ± 1.84 mm and 1.73 ± 0.75 mm, respectively. The mean intra-class correlation values were found between the 0.959 and 0.999. Conclusions: Knowing the distal tibial morphometry is crucial for designing convenient ankle replacement implants for Turkish population. To our knowledge, this study is the first in the literature that identifies posterior malleolar morphometry on dry tibiae. We believe that this study will make a significant contribution to the literature about distal tibial morphometry and especially the posterior malleolus and the data of our study can be used for designing total ankle prosthesis in Turkish population. [ABSTRACT FROM AUTHOR]
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- 2024
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40. Geometric morphometrics to differentiate species and explore seasonal variation in three Mansonia species (Diptera: Culicidae) in central Thailand and their association with meteorological factors.
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Laojun, Sedthapong, Changbunjong, Tanasak, Abdulloh, Arina, and Chaiphongpachara, Tanawat
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GENETIC barcoding , *PHENOTYPIC plasticity , *ATMOSPHERIC pressure , *PHENOTYPES , *MORPHOMETRICS - Abstract
Mansonia mosquito species are recognised as a significant vector of human pathogens, primarily transmitting the filarial nematode, Brugia malayi. In central Thailand, the three most prevalent Mansonia species are Mansonia annulifera, Mansonia indiana and Mansonia uniformis. This study explored the influence of seasonal changes on the phenotypic variation of these Mansonia species in central Thailand using the geometric morphometrics (GM). To ensure accurate species identification, we integrated GM techniques with DNA barcoding, examining distinctions in both phenotype and genotype among the species. The intraspecific genetic divergence ranged from 0.00% to 1.69%, whereas the interspecific genetic divergence ranged from 10.52% to 16.36%. The clear distinction between intra‐ and interspecific distances demonstrated the presence of a barcoding gap, confirming the successful differentiation of the three Mansonia mosquito species through DNA barcoding. Similarly, the interspecies GM assessment for classifying Mansonia species demonstrated a high degree of accuracy, with an overall performance of 98.12%. Exploring seasonal variation in the three Mansonia species revealed wing variations across different seasons, and pronounced variations appearing in the cool season. Regarding their association with meteorological factors, Ma. annulifera and Ma. uniformis showed significant positive correlations with temperature (p < 0.05), and Ma. uniformis also displayed a significant negative correlation with atmospheric pressure (p < 0.05). The insights from this study will deepen our understanding of the adaptive patterns of Mansonia mosquitoes in Thailand's central region, paving the way for enhanced disease surveillance related to these vectors. [ABSTRACT FROM AUTHOR]
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- 2024
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41. Sub-basin prioritisation from morphometry for erosion management in an undulating rocky terrain: Validating different MCDM techniques with respect to RUSLE in the Chaka River Basin, Eastern India.
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Jaman, Md Hasanur, Das, Souvik, Chatterjee, Jaya, Roy, Subha, and Sengupta, Somasis
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MULTIPLE criteria decision making , *EROSION , *NATURAL resources management , *WATERSHED management , *TOPSIS method , *SOIL erosion , *MORPHOMETRICS - Abstract
In an area like India, where a large number of people are dependent upon agriculture, soil erosion assumes the role of a silent killer. A comprehensive soil management plan requires systematic development and planning at the scale of the natural boundaries, i.e., the watersheds. These watersheds are now actively encouraged to become the planning unit for a wide range of natural resource management. Sub-basin prioritisation with respect to erosion susceptibility, therefore, has become increasingly popular in the last few decades as this helps in optimal distribution, especially in a country like India, where the availability of resources is scarce. Erosion is a complex problem wherein a large number of factors play an important role in influencing this process. Therefore, multi-criteria decision-making (MCDM) techniques are becoming more popular in this domain. However, there are a myriad of MCDM models in literature, and a proper and systematic comparison between such MCDM models may help in deciding on the best possible model in the given categories. This paper has tried to make such a comparison for morphometry-based sub-basin prioritisation in the rocky terrain of the Chaka River Basin, Eastern India. The MCDM models that have been investigated include technique for order of preference by similarity to ideal solution (TOPSIS), VlseKriterijumsk Optimizacija Kompromismo Resenje (VIKOR), multi-objective optimisation on the basis of ratio analysis (MOORA), compound factor (CF), weighted sum model (WSM), weighted product model (WPM) and weighted aggregated sum product assessment (WASPAS). These results were compared with respect to the RUSLE-based annual soil loss of the Chaka Basin with the help of the ROC curve. Results reveal that the MOORA MCDM method is the most reliable (AUC = 0.711), whereas the TOPSIS is the least authentic (AUC = 0.378). The middle domain of the Chaka Basin appears to be highly prioritised as compared to the lower domain. [ABSTRACT FROM AUTHOR]
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- 2024
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42. Reassessing the Interpretative Potential of Ethnographic Collections for Early Hunting Technologies.
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Milks, Annemieke, Hoggard, Christian, and Pope, Matt
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DRAG (Aerodynamics) , *MORPHOMETRICS , *MUSEUM studies , *DESCRIPTIVE statistics , *PLEISTOCENE Epoch , *ETHNOLOGY - Abstract
Archaeological studies of early weaponry have relied for decades on ethnographic parallels—whether from ethnohistorical accounts, ethnographic literature, or from objects studied in museum collections. While such accounts and collected objects provided key data in the past, including of morphometrics and functionality, few studies have explored the quality of such data. In this paper, we critically assess a dominant theoretical paradigm, namely the utility of ethnographic collections to assess Pleistocene archaeological material. Our focus is how ethnographic spear morphometrics are used to propose delivery methods of archaeological weapons. We discuss the archaeological significance of early spears, and the role that ethnography has played in interpreting them. We provide new morphometric data of ethnographic wooden spears, which have been used analogically to assess the earliest archaeological hunting tools. We systematically collected data from ethnographic collections of wooden spears in five museums in the UK and Australia including mass, length, diameters and point of balance, alongside any recorded information on provenance and use. Older datasets, as well as the data in this paper, are limited due to collection bias and a lack of detailed museum records. By subjecting the new data to statistical analyses, we find that with a few exceptions morphometrics are not reliable predictors of delivery as thrusting or hand-thrown spears (javelins). Prevalent hypotheses linking variables such as mass, tip design, or maximum diameter with delivery are unsupported by our results. However, the descriptive statistics provided may remain useful as a means of comparative data for archaeological material. We conclude that using simple morphometrics to parse weapon delivery has had a drag effect on forming new and interesting hypotheses about early weapons. [ABSTRACT FROM AUTHOR]
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- 2024
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43. Flow-through imaging and automated analysis of oil-exposed early stage Atlantic cod (Gadus morhua).
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Williamson, David R., Davies, Emlyn J., Ludvigsen, Martin, and Hansen, Bjørn Henrik
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ARTIFICIAL neural networks , *ATLANTIC cod , *IMAGING systems , *MARINE biology , *IMAGE analysis - Abstract
Toxicology studies in early fish life stages serve an important function in measuring the impact of potentially harmful substances, such as crude oil, on marine life. Morphometric analysis of larvae can reveal the effects of such substances in retarding growth and development. These studies are labor intensive and time consuming, typically resulting in only a small number of samples being considered. An automated system for imaging and measurement of experimental animals, using flow-through imaging and an artificial neural network to allow faster sampling of more individuals, has been described previously and used in toxicity experiments. This study compares the performance of the automated imaging and analysis system with traditional microscopy techniques in measuring biologically relevant endpoints using two oil treatments as positive controls. We demonstrate that while the automated system typically underestimates morphometric measurements relative to analysis of manual microscopy images, it shows similar statistical results to the manual method when comparing treatments across most endpoints. It allows for many more individual specimens to be sampled in a shorter time period, reducing labor requirements and improving statistical power in such studies, and is noninvasive allowing for repeated sampling of the same population. [ABSTRACT FROM AUTHOR]
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- 2024
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44. Geometric morphometric analysis describing sexual dimorphism in housefly, Musca domestica Linn. (Diptera: Muscidae).
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Bagbag, Ernel D. and Pondevida, Helen B.
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SEXUAL dimorphism in animals ,HOUSEFLY ,MUSCIDAE ,MORPHOMETRICS ,INSECT evolution ,INSECT morphology - Abstract
Houseflies (Musca domestica) (Diptera: Muscidae) are medically important insect species because they serve as vectors of pathogens. The study generally described the sexual dimorphism of M. domestica based on their wing size and wing shape. This study examined 25 males and 25 females of F1 offspring from wild-caught M. domestica parents. The wings were digitized and 17 landmarks were obtained, scaled, translated, and rotated in General Procrustes Analysis. The wing size (centroid size) of male M. domestica species was significantly larger compared to females (t = - 2.38, df = 48, p = 0.0200). Principal Component Analysis (PCA) and Relative Warp Analysis (RWA) revealed that 29.72% of shape variation from the original data was attributed to a narrow wing shape, and 14.60% toa broad wing shape. Discriminant Function Analysis (DFA) successfully distinguished female and male species based on wing shape, in which males have narrower wings compared to females, indicating the occurrence of sexual dimorphism in wings. [ABSTRACT FROM AUTHOR]
- Published
- 2024
45. A COLEÇÃO DE PILÕES LÍTICOS DA RESERVA TÉCNICA DO LAEE/UEM: ACERVAMENTO, MORFOMETRIAS E ESPACIALIZAÇÃO.
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Mahamut Garcia, Julia, Tadeu Mota, Lucio, and Uliana Macella, Marcio Augusto
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ETHNOHISTORY ,LEGAL instruments ,CULTURAL property ,SCIENTIFIC community ,ACQUISITION of data ,MATERIAL culture - Abstract
Copyright of Revista de Arqueologia is the property of Revista de Arqueologia and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2024
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46. First record of a mottled spine foot, Siganus fuscescens (Houttuyn, 1782), from the Gulf of Mannar, India.
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Vidya Sagar, P. Eshwar Chandra, Bheemeswararao, K., Swapna, N. Mohana, Prasad, G. Shiva, and Dharmakar, P.
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GILLNETTING ,LONGITUDE ,LATITUDE ,SPINE ,MORPHOMETRICS - Abstract
The present study documents the first occurrence of Siganus fuscescens, known as the mottled spine foot, within the inshore waters of Vaan Island (latitude 8°73 N, longitude 78°16 E) and New Fishing Harbor (latitude 8°84 N, longitude 78°22 E), which are located in the Gulf of Mannar region. The species, commonly referred to as rabbitfishes, was captured by bottom-set gill nets deployed in reefassociated areas of the Gulf of Mannar at a depth of approximately 2-3 m. Furthermore, detailed analyses of the morphometric and meristic characteristics of the specimens were conducted using established taxonomic keys. A comprehensive discussion is also presented, elucidating the distribution patterns of Siganus species within the Gulf of Mannar region. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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47. Morphometric and functional changes in the kidney of rats induced by inorganic selenium.
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Randjelović, Pavle, Radulović, Niko, Stojanović, Nikola, and Ilić, Ivan
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KIDNEY physiology ,OXIDATIVE stress ,RATS ,MORPHOMETRICS ,UREA ,KIDNEYS - Abstract
Selenium (Se) is an essential trace element. Depending on concentration, Se can manifest both beneficial and harmful effects on the cell and can have both oxidative and antioxidant effects. Because the therapeutic index for Se is very narrow and it can depend on the form of Se used, we aimed to investigate the potential safety and side effects of inorganic Se on kidney function and structure in rats. After 8 days of treatment, no detectable signs of microscopic changes or oxidative stress in kidney tissue were observed. We detected a moderate increase in urea and creatinine levels in the blood as a sign of a slight decrease in kidney function. The most notable changes in our study were morphometric alterations in proximal tubules and glomeruli, both of which were considerably enlarged. The short-term application of inorganic Se to rats in a supratherapeutic dose induced mild functional and ultrastructural changes in the kidneys. The dose of inorganic Se used could be considered relatively safe for short-term application in situations where Se could be beneficial to the organism, such as the usage of known nephrotoxicants or high levels of oxidative stress in the body. [ABSTRACT FROM AUTHOR]
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- 2024
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48. Morphometric measurements of intraoral anatomy in children with Beckwith-Wiedemann syndrome: a novel approach
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Dominic J. Romeo, Andrew M. George, Jonathan H. Sussman, Manisha Banala, Andrew Wiemken, Meagan Wu, Jinggang J. Ng, Jesse A. Taylor, Richard J. Schwab, Christopher M. Cielo, and Jennifer M. Kalish
- Subjects
Morphometrics ,Macroglossia ,Beckwith-Wiedemann syndrome ,Glossectomy ,Medicine - Abstract
Abstract Background An easy-to-use tool to objectively measure intraoral anatomy with meaningful clinical correlations may improve care for patients with Beckwith-Wiedemann syndrome (BWS), who commonly have symptomatic macroglossia. Methods Children aged 2–17 years with BWS were enrolled between 12/2021 and 01/2024. Digital intraoral photographs with a laser ruler were taken, and morphometric measurements were made using ImageJ software. Relationships between morphometrics and outcomes including BWS clinical score, percentage mosaicism, and incidence of tongue reduction surgery were examined using t-tests and multivariate linear models. Results Pharyngeal morphometric measurements were obtained in 49 patients with BWS. Mouth area, width, and height differed significantly across BWS molecular subtypes. Right-to-left tongue width and mouth width were larger in those with loss of methylation at imprinting control region 2 (IC2 LOM) than other BWS variants. Patients with paternal uniparental isodisomy of chromosome 11p15 (pUPD11) had narrower mouths than others. Those with tongue reduction surgery had more tongue ridging than those without surgery. There were correlations between mouth area and BWS clinical score, tongue width and BWS clinical score, and tongue length and percentage mosaicism. Conclusion Intraoral morphometric measurements are associated with phenotypic burden in BWS. Tongue morphology varies across the BWS spectrum, with IC2 LOM having wider tongues and mouths, and pUPD11 having narrower mouths. Tongue ridging is more common in those selected for surgery. Intraoral morphometric measurements may be safely obtained at low costs across centers caring for children with BWS or others at risk of upper airway obstruction.
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- 2024
- Full Text
- View/download PDF
49. Re-evaluating hypertragulid diversity in the John Day basin, Oregon, USA
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Nicholas A. Famoso and Lana K. Jewell
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mammalia ,artiodactyla ,hypertragulidae ,morphometrics ,dental morphology ,astragalus ,coefficient of variation ,john day formation ,Fossil man. Human paleontology ,GN282-286.7 ,Paleontology ,QE701-760 - Abstract
Despite their relative abundance, members of the family Hypertragulidae (Artiodactyla, Mammalia) have proved a conundrum regarding species diversity in the Turtle Cove Member (Oligocene) of the John Day Formation, located in central and eastern Oregon. Three species and two separate genera are described in the area, but previous research lacks statistical support for this level of variation. We use coefficients of variation (V) on measurements of dentition and astragali of hypertragulid specimens designated Hypertragulus hesperius, Hypertragulus minutus, and Nanotragulus planiceps as a metric for determining whether there were multiple species present in the population. Asymptotic and modified signed-likelihood ratio V equality tests show that V values of anterior-posterior molar length and transverse molar width vary significantly when comparing single species of modern ecological analogs (Muntiacus muntjak, Muntiacus reevesi, and Tragulus javanicus) to groupings of a combined population. However, the V equality tests on dental and postcranial measurements yield almost no significant results when comparing variation in the extinct John Day hypertragulids to an extant population comprised of a single species. Similar comparisons between astragali measurements of hypertragulids and T. javanicus express no significant difference in the level of variation from the combined population to a modern single species. The low level of variation in the hypertragulids and the lack of differentiation between dental characters of individuals does not statistically support the hypothesis that there were multiple species present in the population, suggesting either that cryptic species may be present but impossible to identify without soft tissue remains, or there may have been taxonomic over-splitting of a single hypertragulid species in the John Day region.
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- 2024
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50. Description and Molecular Characterization of a New Dorylaimid Nematode, Mesodorylaimus pini n. sp. (Nematoda: Dorylaimidae) from Korea
- Author
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Mwamula Abraham Okki, Lee Sang Myeong, Jung Young Hak, Kim Yi Seul, and Lee Dong Woon
- Subjects
dna barcodes ,morphology ,morphometrics ,phylogeny ,taxonomy ,Biology (General) ,QH301-705.5 - Abstract
Mesodorylaimus pini n. sp., a new species isolated from the bark and cambium layer of a dead black pine tree is characterized herein using integrative taxonomy, considering both morphological and molecular phylogenetic analyses of the 18S- and 28S-rRNA genes. Mesodorylaimus pini n. sp. is characterized by having a medium-sized body 1.50–1.89 mm long; lip region angular and offset by a depression; a relatively long odontostyle (17.0–19.0 μm); vulval opening a transverse slit, positioned slightly posteriorly; pars refringens vaginae with two elongated drop-shaped to spindle-shaped sclerotizations; an intestine-prerectum junction with a long anteriorly directed conical or tongue-like projection; a relatively long female tail (115–187 μm); spicules 48.0–57.0 μm long; and regularly spaced 7–8 ventromedian supplements. It is closest to M. subtilis, especially in having similar body length and number of ventromedian supplements but can be differentiated from M. subtilis by the longer odontostyle, tongue-like projection, and longer spicules. The phylogenies based on the 18S- and 28S-rRNA sequences showed a well-supported sister relation of M. pini n. sp. with M. subtilis, M. japonicus, M. bastiani, M. pseudobastiani, Calcaridorylaimus castaneae, C. heynsi, and other member species of the group.
- Published
- 2024
- Full Text
- View/download PDF
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