1. Studies of Interaction Between Cyanine Dye T-284 and Fibrillar Alpha-Synuclein
- Author
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Volkova, Kateryna D., Kovalska, Vladyslava B., Losytskyy, Mykhaylo Yu., Veldhuis, G.J., Veldhuis, G., Segers-Nolten, Gezina M.J., Tolmachev, Olexiy I., Subramaniam, Vinod, Yarmoluk, Sergiy M., Executive board Vrije Universiteit, Nanobiophysics, and Faculty of Science and Technology
- Subjects
Sociology and Political Science ,Clinical Biochemistry ,Fluorescence Polarization ,macromolecular substances ,Microscopy, Atomic Force ,Research Support ,Fibril ,Biochemistry ,METIS-268279 ,chemistry.chemical_compound ,Journal Article ,Molecule ,Cyanine ,Non-U.S. Gov't ,Conformational isomerism ,Spectroscopy ,Fluorescent Dyes ,Cyanine dyes - α-synuclein - Amyloid fibrils - Fluorescent detection - Atomic force microscopy ,Alpha-synuclein ,Microscopy ,Molecular Structure ,Atomic force microscopy ,Research Support, Non-U.S. Gov't ,Atomic Force ,Carbocyanines ,Fluorescence ,IR-77901 ,Clinical Psychology ,Crystallography ,chemistry ,alpha-Synuclein ,Law ,Social Sciences (miscellaneous) ,Fluorescence anisotropy - Abstract
A key feature of Parkinson's disease is the formation and accumulation of amyloid fibrils of the natively unfolded protein α-synuclein (ASN) inside neurons. Recently we have proposed novel sensitive monomethinecyanine dye T-284 as fluorescent probe for quantitative detection of ASN amyloid fibrils. In this study the T-284 dye complex with ASN fibril was characterized by means of fluorescence anisotropy, atomic force microscopy and time-resolved fluorescence techniques to give further insights into the mode of dye interaction with amyloid fibrils. The fluorescence anisotropy of T-284 was shown to noticeably increase upon addition of aggregated proteins indicating on stable dye/amyloid fibril complex formation. AFM imaging of fibrillar wild-type ASN revealed differences in heights between ASN fibrils alone and in presence of the T-284 dye (6.37 ± 1.0 nm and 8.0 ± 1.1 nm respectively), that is believed to be caused by embedding of T-284 dye molecules in the "binding channel" running along the fibril. Fluorescence decay analysis of the T-284 in complexes with fibrillar ASN variants revealed the fluorescence lifetime values for T-284/fibril complexes to be an order of magnitude higher as compared to the free dye. Also, the fluorescence decay of free T-284 was bi-exponential, while dye bound to protein yields tri-exponential decay. We suppose that in complexes with fibrillar ASN variants T-284 dye might exist in different "populations" due to interaction with fibrils in different conformers and ways. The exact binding mode of T-284 with ASN fibrils needs further studies. Studied parameters of dye/amyloid fibril complexes are important for the characterization and screening of newly-developed amyloid-sensitive dyes.
- Published
- 2010