63 results on '"M. Signoli"'
Search Results
2. Whole genome sequence of bacteremic Clostridium tertium in a World War I soldier, 1914
- Author
-
M, Meucci, C, Costedoat, E, Verna, F, Adam, M, Signoli, M, Drancourt, M, Beye, G, Aboudharam, R, Barbieri, Anthropologie bio-culturelle, Droit, Ethique et Santé (ADES), Aix Marseille Université (AMU)-EFS ALPES MEDITERRANEE-Centre National de la Recherche Scientifique (CNRS), Aix Marseille Université (AMU), Microbes évolution phylogénie et infections (MEPHI), Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Institut Hospitalier Universitaire Méditerranée Infection (IHU Marseille), Aix-Marseille Université - École de médecine (AMU SMPM MED), Aix-Marseille Université - Faculté des sciences médicales et paramédicales (AMU SMPM), Aix Marseille Université (AMU)-Aix Marseille Université (AMU), and Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)
- Subjects
Microbiology (medical) ,0303 health sciences ,Culturomics ,030306 microbiology ,WWI ,[SDV]Life Sciences [q-bio] ,Paleomicrobiology ,QH426-470 ,16. Peace & justice ,Microbiology ,QR1-502 ,humanities ,[SHS]Humanities and Social Sciences ,Dental pulp ,03 medical and health sciences ,stomatognathic diseases ,Infectious Diseases ,Clostridium tertium ,Immunology and Microbiology (miscellaneous) ,stomatognathic system ,Genetics ,Soldier ,030304 developmental biology ,Research Paper - Abstract
Highlights • This original article is the first report of isolate and culture of a bacterium from ancient human samples and dental pulp in particular. • The dental pulp is a mirror of the individual's infectious state at the time of death. • Ancient dental pulp culture yielded to the identification and isolation of the bacterium Clostridium tertium responsible for septicaemia during World War I,., Background Dental pulp, encapsulating a blood drop, could be used to diagnose pathogen bacteraemia in archaeological materials using DNA-based techniques. We questioned the viability of such ancient pathogens preserved in ancient dental pulp. Methods After meticulous decontamination of 32 teeth collected from 31 World War I soldiers exhumed in Spincourt, France, dental pulps were extracted and cultured under strict anaerobiosis. Colonies were identified by mass spectrometry and whole genome sequencing. Fluorescent in situ hybridisation (FISH) was used for the direct microscopic detection of pathogens of interest in the dental pulp. All the experimental procedures included negative controls, notably sediments in contact with individual SQ517 to ensure that results did not arise from contamination. Findings Clostridium tertium was detected by FISH in two dental pulp specimens taken from a 1914 soldier. After a two-day incubation period, both dental pulp samples grew colonies identified by mass spectrometry and genome sequencing as C. tertium; whereas negative controls remained free of C. tertium in all the observations, and no C. tertium was founded in sediments. Skeletal remains of this soldier exhibited two notches in the left tibia evocative of a cold steel wound, and a probably fatal unhealed bullet impact in the hip bone. Interpretation Data indicated the presence of C. tertium in the dental pulp at the time of the death of one World War I soldier, in 1914. This observation diagnosed C. tertium bacteraemia, with war wounds as the probable portal of entry for C. tertium. Our C. tertium strains ante-dated by three years, the princeps description of this deadly opportunistic pathogen.
- Published
- 2021
3. [Biometric and biomechanic analysis of lumbar posterior facets based on a CT-scan database]
- Author
-
N, Bronsard, T, Serre, P, Staccini, I, Hovorka, L, Thollon, B, Padovani, F, de Peretti, M, Signoli, and P, Tropiano
- Subjects
Adult ,Aged, 80 and over ,Male ,Sacrum ,Lumbar Vertebrae ,Anthropometry ,Databases, Factual ,Rotation ,Age Factors ,Middle Aged ,Zygapophyseal Joint ,Biomechanical Phenomena ,Young Adult ,Fiducial Markers ,Humans ,Female ,Range of Motion, Articular ,Arthrography ,Tomography, X-Ray Computed ,Aged - Abstract
Our knowledge on anatomy of lumbar spine is based on few cadaver's study with old and few subjects. CT-scan is very precise for lumbar facet's morphology. We have analysed 400 subjects. The aim of this study is to measure different distances, angles and circles to better understand the mechanical function of the lumbar facets.We have analysed 720 CT-scan. We had 217 men and 183 women with 59 years of mean age. We used native slices of 1.25 mm thick from L1 to S1. We created transversal plan and we put different mark point. We took their coordinates and we have calculated different distances, angles and mechanical circles. We have compared different axis of rotation of the facets.From L1 to S1, the facets goes near to the posterior wall and far from themselves. Moreover, the posterior angle between both facets increase down to the sacrum. The radius of the left side circle and the right one are very closed in 50% of the cases but the three radius are close only in 10% of cases.This study based on 400 subjects shows that there is not a unique axis of rotation for both lumbar posterior facets. We have had only 50% of symmetry between both sides whatever the level studied.
- Published
- 2013
4. Analyse biometrique et biomecanique des articulaires lombaires posterieures au sein d'une base de donnees scanographique
- Author
-
P. Staccini, L. Thollon, P. Tropiano, F. De Peretti, N. Bronsard, B. Padovani, I. Hovorka, M. Signoli, T. Serre, Hôpital ST Roch, Université Nice Sophia Antipolis (... - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA), Laboratoire Mécanismes d'Accidents (IFSTTAR/TS2/LMA), Institut Français des Sciences et Technologies des Transports, de l'Aménagement et des Réseaux (IFSTTAR), Département d'Informatique Médicale, Clinique St Georges, Clinique St Georges - Nice, Laboratoire de Biomécanique Appliquée (LBA UMR T24), Aix Marseille Université (AMU)-Université Gustave Eiffel, Service d'Imagerie Médicale, Anthropologie bio-culturelle, Droit, Ethique et Santé (ADES), Aix Marseille Université (AMU)-EFS ALPES MEDITERRANEE-Centre National de la Recherche Scientifique (CNRS), UMR 6578 : Anthropologie Bio-Culturelle (UAABC), Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS), Hôpital Nord [CHU - APHM], and Université Nice Sophia Antipolis (1965 - 2019) (UNS)
- Subjects
Physics ,030222 orthopedics ,03 medical and health sciences ,BIOMECANIQUE ,0302 clinical medicine ,X ray computed ,[SDV.IB]Life Sciences [q-bio]/Bioengineering ,Anatomy ,BASE DE DONNEES ,Humanities ,030217 neurology & neurosurgery ,[SHS]Humanities and Social Sciences - Abstract
Resume But de l’etude Nos connaissances anatomiques sur le rachis lombaire reposent sur des dissections cadaveriques rares, comprenant un effectif faible et un âge moyen tres avance. Le scanner permet d’obtenir des informations precises sur la morphologie des articulations posterieures. Nous avons realise des mesures sur 400 patients. Le but de ce travail est de mesurer les articulaires dans le plan transversal et d’envisager leur fonctionnement mecanique en se basant sur l’anatomie. Patients et methodes Sept cent vingt scanners ont ete evalues. Nous avons retenu 217 hommes et 183 femmes d’âge moyen 59 ans. Les coupes natives font 1,25 mm d’epaisseur allant de L1 a S1. Nous creons chaque plan de coupe transversal puis nous positionnons des points de reperes. Les coordonnees de ces points nous permettent de calculer des distances, des angles et le rayon des cercles mecaniques qui decrivent le mieux la forme de l’articulaire. Nous comparons ensuite les rayons des cercles qui representent l’axe de rotation des articulaires. Resultats De L1 a S1, les articulaires se rapprochent du mur posterieur mais s’eloignent l’une de l’autre. De plus, l’angle d’etrave posterieure augmente egalement vers la caudalite. Le rayon des cercles mecaniques droit et gauche sont proches dans 50 % des cas mais le rayon des trois cercles est quasi identique dans moins de 10 % des cas. Conclusion Cette analyse geometrique sur 400 sujets nous montre l’absence d’axe de rotation unique entre l’articulaire droite et gauche. De plus, la symetrie droite et gauche n’est retrouvee que dans 50 % des cas quel que soit le niveau intervertebral etudie.
- Published
- 2013
5. Annexe 5. Description de quelques cas paléopathologiques
- Author
-
M. Panuel, M. Signoli, C. Bouttevin, and O. Dutour
- Published
- 2005
6. [Epidemic recrudescence of the Great Plague in Marseille (May-July 1722): excavation of a mass grave]
- Author
-
M, Signoli, S, Bello, and O, Dutour
- Subjects
Plague ,Recurrence ,Mortuary Practice ,Humans ,Autopsy ,France ,History, 18th Century ,Bone and Bones ,Disease Outbreaks - Abstract
The return of some infectious disease has stimulated specialists to study historical aspects of human infections. A major model for this study is Yersinia pestis which has had a great impact on human demography due to the fact that it is highly contagious and has a high mortality rate similar to that of the most lethal viral pathogenic agents. We carried out excavation of a mass grave containing the bodies of victims of an outbreak of bubonic plague that occurred in Marseille from 1720 to 1722. More than 200 skeletons were uncovered from the grave known as the Observance (second district in Marseille). In conjunction with laboratory testing, archival records were studied to determine the conditions and dates surrounding the use of this mass grave and to explain certain findings made at the site. This multidisciplinary approach revealed previously unknown facts concerning the Great Plague and provided new insight into recrudescence of the epidemic in 1722.
- Published
- 1998
7. [Variation of sphenoidal angle of human skull in the course of aging]
- Author
-
G, Léonetti, M, Signoli, I, Hershkovitz, B, Latimer, J P, Tervé, L, Jellema, F, Cianfarani, and O, Dutour
- Subjects
Adult ,Aged, 80 and over ,Male ,Aging ,Adolescent ,Middle Aged ,Europe ,Age Determination by Skeleton ,Anthropology ,Africa ,Sphenoid Bone ,Humans ,Female ,Aged ,Language - Abstract
The degree of the cranial base flexion is a major parameter in the study of the evolution of verbal communication in mankind. The variability of this area among modern humans has received little attention. In the present study, a sample of 330 modern human skulls have been used to characterize the changes in the angle of the cranial base flexion with age, and its possible relationships with gender and ethnic origin. Statistical analysis of the results show significant changes with age. Two conclusions emerged: i) the debate regarding Neanderthal speech should also consider the effect of age on the cranial base; and ii) the sphenoidal angle can be used as an ageing criterion in forensic and anthropological studies.
- Published
- 1998
8. [Demonstration of a cranial autopsy performed during the Great Plague of Marseille (1720-1722)]
- Author
-
M, Signoli, G, Léonetti, P, Champsaur, C, Brunet, and O, Dutour
- Subjects
Male ,Plague ,Adolescent ,Archaeology ,Anthropology ,Skull ,Humans ,Autopsy ,France ,History, 18th Century - Abstract
The excavation of the mass grave from the Monastery of the Observance dating from the Great Plague of Marseilles revealed the first evidence of an autopsy on the skull of a 15-year-old boy, performed during the spring of 1722. The reconstruction of the skull allows us to reconstitute the anatomic technique used, which is identical to those described in a surgical book dating from 1708. This research highlights the interest in correlating the biological and historical archives, and brings new anthropological data to the debate on the contagious nature of the plague.
- Published
- 1997
9. P292 A look into the past: what has changed in obstetrical and neonatal outcome since the 19th century
- Author
-
Léon Boubli, E. Ricard, M. Panuel, O. Dutour, P. Adalian, J. Mancini, M. Signoli, and X. Carcopino
- Subjects
Pediatrics ,medicine.medical_specialty ,business.industry ,General surgery ,medicine ,Obstetrics and Gynecology ,General Medicine ,business ,Outcome (game theory) - Published
- 2009
10. La catastrophe - Nouveau paradigme ? De l'objet au modèle d'analyse
- Author
-
Clavandier, Gaëlle, Clavandier, Gaëlle, L. Buchet, C. Rigeade, I . Seguy et M. Signoli, DYVPI, Groupe de Recherche en Psychologie Sociale (GRePS), Université Lumière - Lyon 2 (UL2)-Université Lumière - Lyon 2 (UL2)-Centre Max Weber (CMW), École normale supérieure de Lyon (ENS de Lyon)-Université Lumière - Lyon 2 (UL2)-Université Jean Monnet - Saint-Étienne (UJM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure de Lyon (ENS de Lyon)-Université Lumière - Lyon 2 (UL2)-Université Jean Monnet - Saint-Étienne (UJM)-Centre National de la Recherche Scientifique (CNRS), L. Buchet, C. Rigeade, I . Seguy et M. Signoli, Centre Max Weber (CMW), École normale supérieure - Lyon (ENS Lyon)-Université Lumière - Lyon 2 (UL2)-Université Jean Monnet [Saint-Étienne] (UJM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Lyon (ENS Lyon)-Université Lumière - Lyon 2 (UL2)-Université Jean Monnet [Saint-Étienne] (UJM)-Centre National de la Recherche Scientifique (CNRS)-Groupe de Recherche en Psychologie Sociale (GRePS), and Université Lumière - Lyon 2 (UL2)-Université Lumière - Lyon 2 (UL2)
- Subjects
herméneutique ,[SHS.SOCIO]Humanities and Social Sciences/Sociology ,risque ,[SHS.SOCIO] Humanities and Social Sciences/Sociology ,Catastrophes - Published
- 2008
11. Le cimetière de peste des Fédons : des données anthropologiques aux interprétations. Caractères ostéoscopiques particuliers
- Author
-
Castex, Dominique, De la Préhistoire à l'Actuel : Culture, Environnement et Anthropologie (PACEA), Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), B. Bizot, D. Castex, P. Reynaud, M. Signoli, Huchet, Jean-Bernard, and B. Bizot, D. Castex, P. Reynaud, M. Signoli
- Subjects
étude anthropologique ,[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology ,Cimetière des Fédons ,[SHS.ANTHRO-BIO] Humanities and Social Sciences/Biological anthropology ,caractères discrets - Published
- 2005
12. Le cimetière de peste des Fédons : des données anthropologiques aux interprétations. Les gestes funéraires
- Author
-
Moreau, Nathalie, Duday, Henri, Castex, Dominique, Reynaud, Patrick, Institut national de recherches archéologiques préventives (Inrap), De la Préhistoire à l'Actuel : Culture, Environnement et Anthropologie (PACEA), Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), B. Bizot, D. Castex, P. Reynaud, M. Signoli, Huchet, Jean-Bernard, and B. Bizot, D. Castex, P. Reynaud, M. Signoli
- Subjects
étude anthropologique ,pratiques funéraires ,[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology ,Cimetière des Fédons ,[SHS.ANTHRO-BIO] Humanities and Social Sciences/Biological anthropology - Published
- 2005
13. Le cimetière de peste des Fédons : des données anthropologiques aux interprétations. Les gestes funéraires. Description de sépultures représentatives
- Author
-
Duday, Henri, Moreau, Nathalie, Castex, Dominique, De la Préhistoire à l'Actuel : Culture, Environnement et Anthropologie (PACEA), Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), Institut national de recherches archéologiques préventives (Inrap), B. Bizot, D. Castex, P. Reynaud, M. Signoli, Huchet, Jean-Bernard, and B. Bizot, D. Castex, P. Reynaud, M. Signoli
- Subjects
étude anthropologique ,[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology ,Cimetière des Fédons ,[SHS.ANTHRO-BIO] Humanities and Social Sciences/Biological anthropology - Published
- 2005
14. Le cimetière de peste des Fédons : des données anthropologiques aux interprétations. Des particularités démographiques propres au site des Fédons
- Author
-
Castex, Dominique, De la Préhistoire à l'Actuel : Culture, Environnement et Anthropologie (PACEA), Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), B. Bizot, D. Castex, P. Reynaud, M. Signoli, Huchet, Jean-Bernard, and B. Bizot, D. Castex, P. Reynaud, M. Signoli
- Subjects
[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology ,Paléodémographie ,quotient de mortalité ,peste ,[SHS.ANTHRO-BIO] Humanities and Social Sciences/Biological anthropology - Published
- 2005
15. Les flèches de la peste. Essai d'interprétaion allégorique
- Author
-
Vons Jacqueline, Centre d'études supérieures de la Renaissance UMR 7323 (CESR), Ministère de la Culture et de la Communication (MCC)-Université de Tours (UT)-Centre National de la Recherche Scientifique (CNRS), M. Signoli, D. Chevé, G. Boetsch, O. Dutour, Vons, Jacqueline, and M. Signoli , D. Chevé, G. Boetsch, O. Dutour
- Subjects
métaphores ,[SHS.HISPHILSO]Humanities and Social Sciences/History, Philosophy and Sociology of Sciences ,[SHS.HISPHILSO] Humanities and Social Sciences/History, Philosophy and Sociology of Sciences ,représentations ,metaphors ,ComputingMilieux_MISCELLANEOUS ,plague ,peste - Abstract
International audience
- Published
- 2001
16. Les pratiques alimentaires funéraires chez les Mongols Xalx. Purifications, offrandes et repas
- Author
-
Ruhlmann, Sandrine, Éco-Anthropologie (EAE), Muséum national d'Histoire naturelle (MNHN)-Centre National de la Recherche Scientifique (CNRS), and G. Boëtsch, M. Signoli & S. Tzortzis
- Subjects
[SHS.ANTHRO-SE]Humanities and Social Sciences/Social Anthropology and ethnology ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 2009
17. Massacre dans le monastère de Qalat'at Sem'an, Syrie (extrémité ouest du martyrium, sondage BW5)
- Author
-
Jean-Luc Biscop, Pierre-Marie Blanc, Michel Kazanski, Dominique Pieri, Jean-Pierre Sodini, ORIENT ET MÉDITERRANÉE : Textes, Archéologie, Histoire (OM), Université Paris 1 Panthéon-Sorbonne (UP1)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Collège de France (CdF (institution))-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Archéologies et Sciences de l'Antiquité (ArScAn), Université Paris 1 Panthéon-Sorbonne (UP1)-Université Paris Nanterre (UPN)-Ministère de la Culture et de la Communication (MCC)-Centre National de la Recherche Scientifique (CNRS), L. Buchet, C. Rigeade, I. Séguy et M. Signoli, and Université Paris 1 Panthéon-Sorbonne (UP1)-Université Paris 8 Vincennes-Saint-Denis (UP8)-Université Paris Nanterre (UPN)-Ministère de la Culture et de la Communication (MCC)-Institut national de recherches archéologiques préventives (Inrap)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and Prehistory ,Syrie ,[SHS.ANTHRO-SE]Humanities and Social Sciences/Social Anthropology and ethnology ,sanctuaire Saint-Syméon ,ComputingMilieux_MISCELLANEOUS - Abstract
International audience
- Published
- 2007
18. The millennial dynamics of malaria in the mediterranean basin: documenting Plasmodium spp. on the medieval island of Corsica.
- Author
-
Boualam MA, Corbara AG, Aboudharam G, Istria D, Signoli M, Costedoat C, Drancourt M, and Pradines B
- Abstract
Introduction: The lack of well-preserved material upon which to base the paleo-microbiological detection of Plasmodium parasites has prevented extensive documentation of past outbreaks of malaria in Europe. By trapping intact erythrocytes at the time of death, dental pulp has been shown to be a suitable tissue for documenting ancient intraerythrocytic pathogens such as Plasmodium parasites., Methods: Total DNA and proteins extracted from 23 dental pulp specimens collected from individuals exhumed from the 9th to 13th century archaeological site in Mariana, Corsica, were analyzed using open-mind paleo-auto-immunohistochemistry and direct metagenomics, Plasmodium -targeting immunochromatography assays. All experiments incorporated appropriate negative controls., Results: Paleo-auto-immunohistochemistry revealed the presence of parasites Plasmodium spp. in the dental pulp of nine teeth. A further immunochromatography assay identified the presence of at least one Plasmodium antigen in nine individuals. The nine teeth, for which the PfHRP-2 antigen specific of P. falciparum was detected, were also positive using paleo-autoimmunohistochemistry and metagenomics., Conclusion: Dental pulp erythrocytes proved to be suitable for the direct paleomicrobiology documentation of malaria in nine individuals buried in medieval Corsica, in agreement with historical data. This provides additional information on the millennial dynamics of Plasmodium spp. in the Mediterranean basin., Competing Interests: MD was a co-owner of AnthropoPOC®, patented name cited in this review. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Boualam, Corbara, Aboudharam, Istria, Signoli, Costedoat, Drancourt and Pradines.)
- Published
- 2023
- Full Text
- View/download PDF
19. Improving the extraction of ancient Yersinia pestis genomes from the dental pulp.
- Author
-
Clavel P, Louis L, Sarkissian C, Thèves C, Gillet C, Chauvey L, Tressières G, Schiavinato S, Calvière-Tonasso L, Telmon N, Clavel B, Jonvel R, Tzortzis S, Bouniol L, Fémolant JM, Klunk J, Poinar H, Signoli M, Costedoat C, Spyrou MA, Seguin-Orlando A, and Orlando L
- Abstract
Ancient DNA preserved in the dental pulp offers the opportunity to characterize the genome of some of the deadliest pathogens in human history. However, while DNA capture technologies help, focus sequencing efforts, and therefore, reduce experimental costs, the recovery of ancient pathogen DNA remains challenging. Here, we tracked the kinetics of ancient Yersinia pestis DNA release in solution during a pre-digestion of the dental pulp. We found that most of the ancient Y. pestis DNA is released within 60 min at 37°C in our experimental conditions. We recommend a simple pre-digestion as an economical procedure to obtain extracts enriched in ancient pathogen DNA, as longer digestion times release other types of templates, including host DNA. Combining this procedure with DNA capture, we characterized the genome sequences of 12 ancient Y. pestis bacteria from France dating to the second pandemic outbreaks of the 17
th and 18th centuries Common Era., Competing Interests: The authors declare no competing interests., (© 2023 The Author(s).)- Published
- 2023
- Full Text
- View/download PDF
20. Surnames in south-eastern France: structure of the rural population during the 19th century through isonymy.
- Author
-
Kamel C, Saliba-Serre B, Lizee MH, Signoli M, and Costedoat C
- Subjects
- Humans, Birth Certificates, White People, Geography, Genetics, Population, Rural Population, Names
- Abstract
An analysis of the distribution of surnames through time and space allows us to understand the structure of human groups, their exchanges or even their possible isolation. The French population has already been studied through surnames and it has been shown that the Sud-Provence-Alpes-Côte d'Azur region differed from the rest of France in both the 20th and 21st centuries (Mourrieras et al. , ; Scapoli et al. , ). The objective of this study was to understand the population evolution and particularities of the Sud-Provence-Alpes-Côte d'Azur region through an analysis of the distribution of surnames over an earlier period: the 19th century. For this work, 806,069 birth records from 521 communes between 1810 and 1890 were recorded and a total of 23,340 surnames were collected. The estimation of various isonymic parameters has allowed a description of this corpus never exploited before. In order to appreciate the population evolution, the data set was divided into three periods of 25 years. The canton was the geographical unit of this study, and similarities and differences between each of them were evaluated using Lasker distances, which allow the construction of dendrograms. A positive and significant correlation ( p <0.0001) was found between Lasker distances and geographical distances using the Mantel test. The lowest inbreeding estimates were found in the Durance Valley. Migration, estimated from the v -index of Karlin and McGregor (), showed higher values in the south-western quarter of the region. The decrease in R
st values across the three periods is consistent with a homogenization of the patronymic between the cantons. This three-period approach showed a population evolution influenced by linguistic, cultural, historical and migratory phenomena since the Middle Ages, disrupted by the socioeconomic changes of the 19th century.- Published
- 2023
- Full Text
- View/download PDF
21. Post-traumatic growth 5 years after cancer: identification of associated actionable factors.
- Author
-
Evans C, Saliba-Serre B, Préau M, Bendiane MK, Gonçalves A, Signoli M, and Bouhnik AD
- Subjects
- Adaptation, Psychological, Humans, Survivors psychology, Cancer Survivors psychology, Neoplasms psychology, Neoplasms therapy, Posttraumatic Growth, Psychological, Stress Disorders, Post-Traumatic psychology
- Abstract
Background: The number of cancer survivors is growing increasingly worldwide. The long-term negative consequences of the disease are now better known. Cancer may also foster positive outcomes. Some survivors consider life after cancer as the start of a new life and experience positive changes called post-traumatic growth (PTG) measured by a scale developed by Tedeschi and Calhoun., Objective: The purpose of this article was to explore actionable factors affecting PTG, particularly those in relation with health care management and those that reflected health behavior changes., Methods: This study included the 1,982 participants in the VICAN cohort who responded to the questionnaire on living conditions 2 and 5 years after diagnosis. Factors associated with a moderate or high PTG (score ≥ 63) were identified using logistic regressions., Results: Factors positively associated with moderate or high PTG were being satisfied with the time spent by health care team on information (OR:1.35 [1.08;1.70]), increased physical activity (OR:1.42 [1.04;1.95]) and healthier diet (OR:1.85 [1.44;2.36]) since diagnosis, and having benefited from psychological support at diagnosis (OR:1.53 [1.16;2.01])., Conclusion: High PTG is positively associated with health behavior and time spent on information. Our findings suggest that appropriate clinical and educational interventions can help foster growth after the experience of cancer. Even if we do not know what causes what, it is admitted that the interventions leading to an increase of physical activity, for example, are good from all points of view., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
- Published
- 2022
- Full Text
- View/download PDF
22. History of the plague of 1720-1722, in Marseille.
- Author
-
Signoli M
- Subjects
- Humans, Genomics, Epidemics
- Abstract
The plague epidemic of 1720-1722 had a profound effect on the history of the city of Marseille. A subject of numerous scientific studies and a source of inspiration for novels, one of the last great European epidemics is well-documented. In this article, we have sought to draw on the numerous documents left by the administrative services of the time or by the writings of survivors recounting their vision of the situation. We have completed this historical approach by referring to the study of mass graves of plague victims and will show how the simultaneous reading of two types of archives (historical and biological) can provide better anthropological knowledge of epidemic phenomena. The perspectives of interdisciplinary approaches to past infectious diseases are numerous, notably with the contributions of paleomicrobiology and genomics, and are particularly relevant today's health context., (Copyright © 2022 Elsevier Masson SAS. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
23. Paleoserology points to Coronavirus as possible causative pathogens of the 'Russian flu'.
- Author
-
Ramassy L, Oumarou Hama H, Costedoat C, Signoli M, Verna E, La Scola B, Aboudharam G, Barbieri R, and Drancourt M
- Subjects
- Humans, Russia, Coronavirus, Coronavirus Infections, Influenza, Human
- Published
- 2022
- Full Text
- View/download PDF
24. Differential word expression analyses highlight plague dynamics during the second pandemic.
- Author
-
Barbieri R, Nodari R, Signoli M, Epis S, Raoult D, and Drancourt M
- Abstract
Research on the second plague pandemic that swept over Europe from the fourteenth to nineteenth centuries mainly relies on the exegesis of contemporary texts and is prone to interpretive bias. By leveraging certain bioinformatic tools routinely used in biology, we developed a quantitative lexicography of 32 texts describing two major plague outbreaks, using contemporary plague-unrelated texts as negative controls. Nested, network and category analyses of a 207-word pan-lexicome, comprising overrepresented terms in plague-related texts, indicated that 'buboes' and 'carbuncles' are words that were significantly associated with the plague and signalled an ectoparasite-borne plague. Moreover, plague-related words were associated with the terms 'merchandise', 'movable', 'tatters', 'bed' and 'clothes'. Analysing ancient texts using the method reported in this paper can certify plague-related historical records and indicate the particularities of each plague outbreak, which can inform on the potential sources for the causative Yersinia pestis ., (© 2022 The Authors.)
- Published
- 2022
- Full Text
- View/download PDF
25. Variola virus DNA in skeletal remains, 17th to 18th centuries, southeastern France.
- Author
-
Meffray A, Ardagna Y, Sillano B, Parmentier S, Pouget B, Signoli M, and Biagini P
- Subjects
- France, History, 17th Century, History, 18th Century, Humans, Body Remains virology, DNA, Viral isolation & purification, Variola virus
- Published
- 2021
- Full Text
- View/download PDF
26. African Gene Flow Reduces Beta-Ionone Anosmia/Hyposmia Prevalence in Admixed Malagasy Populations.
- Author
-
Razafindrazaka H, Pereda-Loth V, Ferdenzi C, Heiske M, Alva O, Randriamialisoa M, Costedoat C, Signoli M, Talou T, Courtade-Saidi M, Boland A, Deleuze JF, Rouby C, Radimilahy C, Letellier T, Bensafi M, and Pierron D
- Abstract
While recent advances in genetics make it possible to follow the genetic exchanges between populations and their phenotypic consequences, the impact of the genetic exchanges on the sensory perception of populations has yet to be explored. From this perspective, the present study investigated the consequences of African gene flow on odor perception in a Malagasy population with a predominantly East Asian genetic background. To this end, we combined psychophysical tests with genotype data of 235 individuals who were asked to smell the odorant molecule beta-ionone (βI). Results showed that in this population the ancestry of the OR5A1 gene significantly influences the ability to detect βI. At the individual level, African ancestry significantly protects against specific anosmia/hyposmia due to the higher frequency of the functional gene (OR ratios = 14, CI: 1.8-110, p -value = 0.012). At the population level, African introgression decreased the prevalence of specific anosmia/hyposmia to this odorous compound. Taken together, these findings validate the conjecture that in addition to cultural exchanges, genetic transfer may also influence the sensory perception of the population in contact.
- Published
- 2021
- Full Text
- View/download PDF
27. No particular genomic features underpin the dramatic economic consequences of 17 th century plague epidemics in Italy.
- Author
-
Seguin-Orlando A, Costedoat C, Der Sarkissian C, Tzortzis S, Kamel C, Telmon N, Dalén L, Thèves C, Signoli M, and Orlando L
- Abstract
The 17
th century plague epidemic had a particularly strong demographic toll in Southern Europe, especially Italy, where it caused long-lasting economical damage. Whether this resulted from ineffective sanitation measures or more pathogenic Yersinia pestis strains remains unknown. DNA screening of 26 skeletons from the 1629-1630 plague cemetery of Lariey (French Alps) identified two teeth rich in plague genetic material. Further sequencing revealed two Y. pestis genomes phylogenetically closest to those from the 1636 outbreak of San Procolo a Naturno, Italy. They both belonged to a cluster extending from the Alps to Northern Germany that probably propagated during the Thirty Years war. Sequence variation did not support faster evolutionary rates in the Italian genomes and revealed only rare private non-synonymous mutations not affecting virulence genes. This, and the more heterogeneous spatial diffusion of the epidemic outside Italy, suggests environmental or social rather than biological causes for the severe Italian epidemic trajectory., Competing Interests: The authors declare no competing interests., (© 2021 The Author(s).)- Published
- 2021
- Full Text
- View/download PDF
28. Yersinia pestis: the Natural History of Plague.
- Author
-
Barbieri R, Signoli M, Chevé D, Costedoat C, Tzortzis S, Aboudharam G, Raoult D, and Drancourt M
- Subjects
- Animals, Archaeology, Clonal Evolution, Humans, Insect Vectors microbiology, Phylogeny, Population Surveillance, Siphonaptera microbiology, Soil Microbiology, Yersinia pestis genetics, Yersinia pestis isolation & purification, Plague epidemiology, Plague transmission, Rodentia microbiology, Yersinia pestis classification
- Abstract
The Gram-negative bacterium Yersinia pestis is responsible for deadly plague, a zoonotic disease established in stable foci in the Americas, Africa, and Eurasia. Its persistence in the environment relies on the subtle balance between Y. pestis -contaminated soils, burrowing and nonburrowing mammals exhibiting variable degrees of plague susceptibility, and their associated fleas. Transmission from one host to another relies mainly on infected flea bites, inducing typical painful, enlarged lymph nodes referred to as buboes, followed by septicemic dissemination of the pathogen. In contrast, droplet inhalation after close contact with infected mammals induces primary pneumonic plague. Finally, the rarely reported consumption of contaminated raw meat causes pharyngeal and gastrointestinal plague. Point-of-care diagnosis, early antibiotic treatment, and confinement measures contribute to outbreak control despite residual mortality. Mandatory primary prevention relies on the active surveillance of established plague foci and ectoparasite control. Plague is acknowledged to have infected human populations for at least 5,000 years in Eurasia. Y. pestis genomes recovered from affected archaeological sites have suggested clonal evolution from a common ancestor shared with the closely related enteric pathogen Yersinia pseudotuberculosis and have indicated that ymt gene acquisition during the Bronze Age conferred Y. pestis with ectoparasite transmissibility while maintaining its enteric transmissibility. Three historic pandemics, starting in 541 AD and continuing until today, have been described. At present, the third pandemic has become largely quiescent, with hundreds of human cases being reported mainly in a few impoverished African countries, where zoonotic plague is mostly transmitted to people by rodent-associated flea bites., (Copyright © 2020 American Society for Microbiology.)
- Published
- 2020
- Full Text
- View/download PDF
29. An outbreak of relapsing fever unmasked by microbial paleoserology, 16th century, France.
- Author
-
Oumarou Hama H, Barbieri R, Guirou J, Chenal T, Mayer A, Ardagna Y, Signoli M, Aboudharam G, Raoult D, and Drancourt M
- Subjects
- Adult, Animals, Bacteria genetics, Bacteria immunology, Burial history, DNA, Bacterial genetics, Dental Pulp chemistry, Dental Pulp microbiology, France, History, 16th Century, Humans, Male, Paleopathology, Phthiraptera, Seroepidemiologic Studies, Antibodies, Bacterial analysis, Disease Outbreaks history, Relapsing Fever epidemiology, Relapsing Fever history, Relapsing Fever microbiology, Vector Borne Diseases epidemiology, Vector Borne Diseases history, Vector Borne Diseases microbiology
- Abstract
Objectives: Depicting past epidemics currently relies on DNA-based detection of pathogens, an approach limited to pathogens with well-preserved DNA sequences. We used paleoserology as a complementary approach detecting specific antibodies under a mini line-blot format including positive and negative control antigens., Methods: Mini line blot assay incorporated skim milk as negative control, Staphylococcus aureus as positive control, and antigens prepared from lice-borne pathogens Rickettsia prowazekii, Borrelia recurrentis, Bartonella quintana, and Yersinia pestis. Paleoserums were extracted from rehydrated dental pulp recovered from buried individuals. Mini line blots observed with the naked eye, were quantified using a scanner and appropriate software. Paleoserology was applied to the indirect detection of lice-borne pathogens in seven skeletons exhumed from a 16th-17th century suspected military burial site (Auxi-le-Château); and 14 civils exhumed from a 5th-13th century burial site (Saint-Mont). Direct detection of pathogens was performed using quantitative real-time PCR., Results: In Auxi-le-Château, paleoserology yielded 7/7 interpretable paleoserums including 7/7 positives for B. recurrentis including one also positive for B. quintana. In Saint-Mont, paleoserology yielded 8/14 interpretable paleoserums and none reacted against any of the four pathogens. Antibodies against R. prowazekii and Y. pestis were not detected. The seroprevalence was significantly higher in the military burial site of Auxi-le-Château than in the civil burial site of Saint-Mont. Real-time PCR detection of B. quintana yielded 5/21 positive (3 at Saint-Mont and 2 at Auxi-le-Château) whereas B. recurrentis was not detected., Conclusions: Paleoserology unmasked an outbreak of relapsing B. recurrentis fever in one 16th - 17th century military garrison, missed by real-time PCR. Paleoserology offers a new tool for investigating past epidemics, in complement to DNA sequence-based approaches., (© 2020 Wiley Periodicals LLC.)
- Published
- 2020
- Full Text
- View/download PDF
30. French soldiers who died during both World Wars: from recovery to repatriation.
- Author
-
Verna E, Costedoat C, Stevanovitch A, Adam F, Desfossés Y, Jacques A, and Signoli M
- Subjects
- Archaeology, Bone and Bones, DNA Fingerprinting, Forensic Sciences, France, History, 20th Century, Humans, Male, World War I, World War II, Body Remains, Military Personnel
- Abstract
The study of human remains from the first and the second World War is important for enhancing our understanding of that historical period. Despite the fact that the period has been well-documented previously, gaps remain, particularly as a result of the destruction of archives. In fact, for just WWI, more than 700,000 soldiers from both sides remain missing. Scientific and political collaborations established in hopes of recovering and identifying soldiers will allow many families understand "what happened" to their loved ones and facilitate the return of the soldiers their homes. In this paper, the recovery of the human remains of French soldiers WWI and WWII will be described through the lens of the legislation in place governing the retrieval and identification of the remains, protocols established for recovery, excavation and analysis, and the dissemination data. These features will be illustrated using three case studies that involve French soldiers who died during WWI. Research of this type is the result of true interdisciplinary and sometimes international, depending on the context, collaboration. The public and academic the dissemination of these archaeological discoveries, both to academics and the public, is crucial and a type of remembrance., Competing Interests: Declaration of Competing Interest No conflict interest., (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Published
- 2020
- Full Text
- View/download PDF
31. When a lost "Petit Prince" meets Antoine de Saint Exupéry: An anthropological case report.
- Author
-
Costedoat C, Adalian P, Bouzaid E, Martinet A, Vanrell L, von Gartzen L, Castellano P, Signoli M, Tzortzis S, and Stevanovitch A
- Subjects
- Age Determination by Skeleton methods, Age Determination by Teeth methods, DNA isolation & purification, DNA, Mitochondrial genetics, France, History, 20th Century, Humans, Male, Microsatellite Repeats, Military Personnel, Polymerase Chain Reaction, Radiometric Dating, Sex Determination by Skeleton methods, World War II, Bone and Bones chemistry, Bone and Bones pathology, DNA Fingerprinting, Forensic Anthropology, Pilots
- Abstract
This case study reports the anthropological analysis of bones remains discovered on Riou Island (Marseille, France) and the story of two World War II fighter pilots. The discovery of bones on "The Fountain of the Greeks" square on Riou Island occurred in the 1960's and a first anthropological study described a 35-year-old man, about 1.77 m tall, buried since an estimated period between the 13th and 16th centuries. The case was "closed" and the bones were considered as isolated archaeological remains. Few years later, near the coasts of Riou Island, parts of two planes were discovered. One was from of a German Messerschmitt Bf 109 F-4 of the Luftwaffe piloted by Prince Alexis fürst zu Bentheim und Steinfurt, and the other from a French P-38 Lightning F-5 B piloted by Antoine de Saint-Exupery. Therefore, the identification of the skeletal remains mentioned above was then thought to be perhaps one of the two World War II pilots. In this particular context we performed forensic and molecular biology analyses to resolve this identification., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2019
- Full Text
- View/download PDF
32. Developmental stability and environmental stress: A geometric morphometrics analysis of asymmetry in the human femur.
- Author
-
Mopin C, Chaumoître K, Signoli M, and Adalian P
- Subjects
- Adult, Anthropology, Physical, Anthropometry, Female, Health Status, Humans, Male, Middle Aged, Young Adult, Femur anatomy & histology, Femur pathology, Stress, Physiological physiology
- Abstract
Objectives: The evaluation of developmental stability (DS) by measuring fluctuating asymmetry (FA), a bioindicator of general cumulative stress, is an approach that has often been used to characterize health status in past populations. New techniques of geometric morphometrics now enable a better appreciation of FA than before, with a more refined quantification of variation. The aim of our study is to determine the effectiveness of geometric morphometrics analyses of asymmetry in the human femur for the study of individual DS and inferring health status of human populations., Materials and Methods: We conducted a comparative analysis between two diachronic populations of distinct and known health status. Two samples of 70 pairs of adult femurs from individuals of comparable age range and sex were selected and CT-scanned. For each 3D reconstruction, two sets of 27 landmarks were digitized to quantify and minimize the effect of measurement error on the evaluation of FA., Results: While the measurement of FA in femoral centroid size seemed comparable between the samples, the amount of FA in femoral shape differed. Individuals who experienced high levels of environmental stress presented higher intra-individual variation. In parallel, results did not reveal any significant differences in DS between sexes or age groups., Discussion: The geometric morphometrics analysis of femoral asymmetry was effective for distinguishing two populations. After considering various factors of influence, genetics and biomechanics seem to have a limited impact on the results. Expressing FA appears to be normal but dependent on the disturbances of DS produced by environmental stress., (© 2018 Wiley Periodicals, Inc.)
- Published
- 2018
- Full Text
- View/download PDF
33. Analysis of Anelloviridae sequences characterized from serial human and animal biological samples.
- Author
-
Bédarida S, Dussol B, Signoli M, and Biagini P
- Subjects
- Adult, Amino Acid Sequence, Anelloviridae classification, Anelloviridae isolation & purification, Animals, Cats, DNA Primers chemistry, DNA Primers metabolism, DNA Virus Infections diagnosis, Female, France, Humans, Male, Nucleic Acid Amplification Techniques methods, Open Reading Frames, Renal Dialysis, Renal Insufficiency, Chronic pathology, Renal Insufficiency, Chronic therapy, Renal Insufficiency, Chronic virology, Saliva virology, Sequence Alignment, Sequence Analysis, DNA, Anelloviridae genetics, DNA Virus Infections virology, DNA, Circular genetics, DNA, Viral genetics, Genome, Viral
- Abstract
Rolling-circle amplification-sequence-independent single primer amplifications (RCA-SISPA) and/or RCA-PCR-based approaches were applied to serial human plasma and animal (domestic cat) saliva samples. Complete SENV-H-related and PRA4 Anelloviridae genomes were characterized and analysed over time (~16 and 6.5years for human and animal samples, respectively). Genomic sequences and deduced putative coding regions were compared. Comparable values, i.e. ~2×10
-4 subs/site/year, were obtained for estimated rates of non-synonymous substitutions. A "hot-spot" of mutations located on the SENV-H-related ORF1 was identified. These results are first data concerning Anelloviridae evolution in a human and an animal host based on the analysis of complete sequences., (Copyright © 2017 Elsevier B.V. All rights reserved.)- Published
- 2017
- Full Text
- View/download PDF
34. Paleoproteomics of the Dental Pulp: The plague paradigm.
- Author
-
Barbieri R, Mekni R, Levasseur A, Chabrière E, Signoli M, Tzortzis S, Aboudharam G, and Drancourt M
- Subjects
- Burial, Chromatography, Liquid, Dental Pulp microbiology, France, Host-Pathogen Interactions, Humans, Paleopathology, Plague microbiology, Tandem Mass Spectrometry methods, Time Factors, Yersinia pestis physiology, Bacterial Proteins analysis, Dental Pulp metabolism, Peptides analysis, Plague metabolism, Proteomics methods, Yersinia pestis metabolism
- Abstract
Chemical decomposition and fragmentation may limit the detection of ancient host and microbial DNA while some proteins can be detected for extended periods of time. We applied paleoproteomics on 300-year-old dental pulp specimens recovered from 16 individuals in two archeological funeral sites in France, comprising one documented plague site and one documented plague-negative site. The dental pulp paleoproteome of the 16 teeth comprised 439 peptides representative of 30 proteins of human origin and 211 peptides representative of 27 proteins of non-human origin. Human proteins consisted of conjunctive tissue and blood proteins including IgA immunoglobulins. Four peptides were indicative of three presumable Yersinia pestis proteins detected in 3/8 dental pulp specimens from the plague-positive site but not in the eight dental pulp specimens collected in the plague-negative site. Paleoproteomics applied to the dental pulp is a new and innovative approach to screen ancient individuals for the detection of blood-borne pathogens and host inflammatory response.
- Published
- 2017
- Full Text
- View/download PDF
35. Forensic use of the Greulich and Pyle atlas: prediction intervals and relevance.
- Author
-
Chaumoitre K, Saliba-Serre B, Adalian P, Signoli M, Leonetti G, and Panuel M
- Subjects
- Adolescent, Adult, Child, Child, Preschool, Female, France, Hand diagnostic imaging, Humans, Infant, Male, Radiography, Reproducibility of Results, Young Adult, Age Determination by Skeleton methods, Forensic Anthropology methods
- Abstract
Objective: The Greulich and Pyle (GP) atlas is one of the most frequently used methods of bone age (BA) estimation. Our aim is to assess its accuracy and to calculate the prediction intervals at 95% for forensic use., Methods: The study was conducted on a multi-ethnic sample of 2614 individuals (1423 boys and 1191 girls) referred to the university hospital of Marseille (France) for simple injuries. Hand radiographs were analysed using the GP atlas. Reliability of GP atlas and agreement between BA and chronological age (CA) were assessed and prediction intervals at 95% were calculated., Results: The repeatability was excellent and the reproducibility was good. Pearson's linear correlation coefficient between CA and BA was 0.983. The mean difference between BA and CA was -0.18 years (boys) and 0.06 years (girls). The prediction interval at 95% for CA was given for each GP category and ranged between 1.2 and more than 4.5 years., Conclusion: The GP atlas is a reproducible and repeatable method that is still accurate for the present population, with a high correlation between BA and CA. The prediction intervals at 95% are wide, reflecting individual variability, and should be known when the method is used in forensic cases., Key Points: • The GP atlas is still accurate at the present time. • There is a high correlation between bone age and chronological age. • Individual variability must be known when GP is used in forensic cases. • Prediction intervals (95%) are large; around 4 years after 10 year olds.
- Published
- 2017
- Full Text
- View/download PDF
36. Tracing back ancient oral microbiomes and oral pathogens using dental pulps from ancient teeth.
- Author
-
Rascovan N, Huynh H, Chouin G, Adekola K, Georges-Zimmermann P, Signoli M, Desfosses Y, Aboudharam G, Drancourt M, and Desnues C
- Abstract
Ancient dental pulps are highly precious samples because they conserve DNA from humans and blood-borne pathogens for ages. However, little is known about the microbial communities present in dental pulps. Here, we analyzed ancient and modern dental pulp samples from different time periods and geographic regions and found that they are colonized by distinct microbial communities, which can be differentiated from other oral cavity samples. We found that despite the presence of environmental bacteria, ancient dental pulps conserve a clear and well-conserved record of oral microbes. We were able to detect several different oral pathogens in ancient and modern dental pulps, which are commonly associated with periodontal diseases. We thus showed that ancient dental pulps are not only valuable sources of DNA from humans and systemic infections, but also an open window for the study of ancient oral microbiomes.
- Published
- 2016
- Full Text
- View/download PDF
37. Characterization of the Funeral Groups Associated with Plague Epidemics.
- Author
-
Tzortzis S and Signoli M
- Subjects
- Burial, Cemeteries, Humans, Epidemics, Fossils microbiology, Paleopathology methods, Plague epidemiology
- Abstract
There are several scenarios regarding how burial sites in archaeological contexts are discovered. We will focus on two scenarios according to the degree of historical knowledge regarding the studied sector. The excavation may be performed in a known funeral place or a highly suspected place (e.g., the interior or immediate exterior space in a religious monument or a parish cemetery). Also, the excavation of unexpected graves or graves discovered by chance may occur in places that had unknown or forgotten funeral purposes.
- Published
- 2016
- Full Text
- View/download PDF
38. Restricted diversity of dental calculus methanogens over five centuries, France.
- Author
-
Huynh HT, Nkamga VD, Signoli M, Tzortzis S, Pinguet R, Audoly G, Aboudharam G, and Drancourt M
- Subjects
- Escherichia coli, France, Humans, In Situ Hybridization, Fluorescence, Phylogeny, RNA, Ribosomal, 16S, Archaea metabolism, Biodiversity, Dental Calculus microbiology, Methane metabolism
- Abstract
Methanogens are acknowledged archaeal members of modern dental calculus microbiota and dental pathogen complexes. Their repertoire in ancient dental calculus is poorly known. We therefore investigated archaea in one hundred dental calculus specimens collected from individuals recovered from six archaeological sites in France dated from the 14(th) to 19(th) centuries AD. Dental calculus was demonstrated by macroscopic and cone-beam observations. In 56 calculus specimens free of PCR inhibition, PCR sequencing identified Candidatus Methanobrevibacter sp. N13 in 44.6%, Methanobrevibacter oralis in 19.6%, a new Methanomassiliicoccus luminyensis-like methanogen in 12.5%, a Candidatus Nitrososphaera evergladensis-like in one and Methanoculleus bourgensis in one specimen, respectively. One Candidatus Methanobrevibacter sp. N13 dental calculus was further documented by fluorescent in situ hybridization. The prevalence of dental calculus M. oralis was significantly lower in past populations than in modern populations (P = 0.03, Chi-square test). This investigation revealed a previously unknown repertoire of archaea found in the oral cavity of past French populations as reflected in preserved dental calculus.
- Published
- 2016
- Full Text
- View/download PDF
39. [Study of remains and dental wastes of a First World War German rest camp].
- Author
-
Lan R, Tzortzis S, Desfosses Y, Signoli M, and Tardivo D
- Subjects
- Dental Materials history, Dental Waste history, Germany, History, 20th Century, Humans, Dental Prosthesis history, Military Personnel history, Periodontal Diseases history, Tooth Diseases history, World War I
- Abstract
Introduction: This article presents the analysis of dental remains and waste from the dental office of a German rest camp of the First World War in order to study the living conditions of the soldiers, the care policy and the prosthetic rehabilitation techniques used in this context., Materials and Methods: The study included both dental and prosthetic remains, revealed during the excavation. The criteria to determine dental and periodontal health were the presence or absence of caries, wear, tartar and periodontal lesion. Location, severity and frequency of each of these parameters were examined. Regarding the prosthetic remains, the type of prosthesis and the materials used were determined., Results: Three hundred and twenty seven (327) dental remains were analyzed. A high prevalence of large caries, especially in the molar areas, was highlighted. The incisal areas had however more wear and tartar. 183 casts of plaster dental arcade allowed to highlight a significant proportion of posterior edentulous. Prosthetic remains and laboratory waste revealed the use of vulcanite and porcelain for making dentures.
- Published
- 2014
40. [Biometric and biomechanic analysis of lumbar posterior facets based on a CT-scan database].
- Author
-
Bronsard N, Serre T, Staccini P, Hovorka I, Thollon L, Padovani B, de Peretti F, Signoli M, and Tropiano P
- Subjects
- Adult, Age Factors, Aged, Aged, 80 and over, Anthropometry, Arthrography, Biomechanical Phenomena, Databases, Factual, Female, Fiducial Markers, Humans, Lumbar Vertebrae physiology, Male, Middle Aged, Range of Motion, Articular, Rotation, Sacrum diagnostic imaging, Young Adult, Zygapophyseal Joint physiology, Lumbar Vertebrae diagnostic imaging, Tomography, X-Ray Computed, Zygapophyseal Joint anatomy & histology
- Abstract
Aim of the Study: Our knowledge on anatomy of lumbar spine is based on few cadaver's study with old and few subjects. CT-scan is very precise for lumbar facet's morphology. We have analysed 400 subjects. The aim of this study is to measure different distances, angles and circles to better understand the mechanical function of the lumbar facets., Patients and Methods: We have analysed 720 CT-scan. We had 217 men and 183 women with 59 years of mean age. We used native slices of 1.25 mm thick from L1 to S1. We created transversal plan and we put different mark point. We took their coordinates and we have calculated different distances, angles and mechanical circles. We have compared different axis of rotation of the facets., Results: From L1 to S1, the facets goes near to the posterior wall and far from themselves. Moreover, the posterior angle between both facets increase down to the sacrum. The radius of the left side circle and the right one are very closed in 50% of the cases but the three radius are close only in 10% of cases., Conclusion: This study based on 400 subjects shows that there is not a unique axis of rotation for both lumbar posterior facets. We have had only 50% of symmetry between both sides whatever the level studied., (Copyright © 2013 Elsevier Masson SAS. All rights reserved.)
- Published
- 2013
- Full Text
- View/download PDF
41. Reflections on crisis burials related to past plague epidemics.
- Author
-
Signoli M
- Subjects
- Demography, History, 15th Century, History, 16th Century, History, 17th Century, History, 18th Century, History, 19th Century, History, 20th Century, History, 21st Century, History, Medieval, Humans, Plague epidemiology, Pandemics, Plague history, Plague mortality, Yersinia pestis pathogenicity
- Abstract
Drawing its etymology from the Latin pestis (curse), plague, over the centuries, has been more dreaded by humankind than any other epidemic. The Apocalypse had recognized plague as the archetypal divine curse, 'the power to kill over a fourth of the earth'. Plague is thus a particular topic of study, insofar that it is one of the rare epidemics that has had recurrent major consequences on demography and human societies. Its highly transmissible nature, the brutality of its action, its high pathogenicity, marked by strong lethality and great swiftness, and the complete absence of treatment options before the 20th century conferred on it a sinister aspect. Generating a series of severe demographic crises, well known in the Western world, it has necessarily influenced the evolution of societies at both the biological and cultural levels., (© 2012 The Author. Clinical Microbiology and Infection © 2012 European Society of Clinical Microbiology and Infectious Diseases.)
- Published
- 2012
- Full Text
- View/download PDF
42. Immuno-PCR--a new tool for paleomicrobiology: the plague paradigm.
- Author
-
Malou N, Tran TN, Nappez C, Signoli M, Le Forestier C, Castex D, Drancourt M, and Raoult D
- Subjects
- Antigens, Bacterial analysis, Dental Pulp microbiology, Enzyme-Linked Immunosorbent Assay, History, Ancient, Humans, Methods, Paleontology standards, Plague diagnosis, Polymerase Chain Reaction standards, Sensitivity and Specificity, Tooth microbiology, Paleontology methods, Plague microbiology, Polymerase Chain Reaction methods, Yersinia pestis isolation & purification
- Abstract
Background: The cause of past plague pandemics was controversial but several research teams used PCR techniques and dental pulp as the primary material to reveal that they were caused by Yersinia pestis. However, the degradation of DNA limits the ability to detect ancient infections., Methods: We used for the first time immuno-PCR to detect Yersinia pestis antigens; it can detect protein concentrations 70 times lower than the standard ELISA. After determining the cut-off value, we tested 34 teeth that were obtained from mass graves of plague, and compared previous PCR results with ELISA and immuno-PCR results., Results: The immuno-PCR technique was the most sensitive (14 out of 34) followed by the PCR technique (10 out of 34) and ELISA (3 out of 34). The combination of these three methods identified 18 out of 34 (53%) teeth as presumably being from people with the plague., Conclusion: Immuno-PCR is specific (no false-positive samples were found) and more sensitive than the currently used method to detect antigens of ancient infections in dental pulp. The combination of three methods, ELISA, PCR and immuno-PCR, increased the capacity to identify ancient pathogens in dental pulp.
- Published
- 2012
- Full Text
- View/download PDF
43. [A look into the past: improves in obstetrical and neonatal outcome in maternity since the 19th century].
- Author
-
Ricard E, Carcopino X, Lalys L, Bertrand J, Le Du R, Mancini J, Boubli L, Signoli M, Panuel M, and Adalian P
- Subjects
- Adolescent, Adult, Female, France epidemiology, History, 19th Century, History, 20th Century, History, 21st Century, Hospitals, Maternity history, Hospitals, Maternity statistics & numerical data, Humans, Infant Mortality, Infant, Newborn, Maternal Mortality, Middle Aged, Obstetrics statistics & numerical data, Obstetrics trends, Pregnancy, Young Adult, Delivery, Obstetric history, Delivery, Obstetric statistics & numerical data, Delivery, Obstetric trends, Obstetrics history, Pregnancy Outcome epidemiology
- Abstract
Objective: Evaluate changes in obstetrical and neonatal outcome of women who delivered in maternity hospital since the 19(th) century., Materials and Methods: Data from a historic cohort of 1022 women who delivered between 1871 and 1874 in the hôtel Dieu hospital of Marseille were compared to those from 1159 women who delivered from 2005 to 2006 in the level 3 maternity of Nord hospital of Marseille (contemporary cohort). Deliveries that had occured before 22 weeks and/or with a foetal birth weight of less than 500 g were excluded., Results: A total of 2131 pregnancies were included: 1011 and 1120 in historic and contemporary cohort, respectively. Despite comparable mean term of delivery, mean birth weight of neonates from historic cohort were significantly lower: 2971 g (550-4900 g) vs 3250 g (500-5375 g), respectively (p<0.001). Stillbirths were reported in 72 (7.1%) cases in historic cohort compared to nine (0.8%) in contemporary cohort (p<0.001). Neonatal mortality was 3.7% in historic cohort and 1.9% in contemporary cohort (p=0.012). A total of 99 (9.8%) maternal deaths were reported in historic cohort, while none in contemporary cohort (p<0.001). A wide majority of maternal deaths were caused by maternal infection (72.9%); 5.2% were caused by postpartum haemorrhage., Conclusion: Our results illustrate the tremendous impact on maternal and neonatal outcome of advances in obstetrical management. The significant increase in the median foetal birth weight is likely to be related to wide changes in environmental conditions and behaviour., (Copyright © 2011. Published by Elsevier Masson SAS.)
- Published
- 2011
- Full Text
- View/download PDF
44. High throughput, multiplexed pathogen detection authenticates plague waves in medieval Venice, Italy.
- Author
-
Tran TN, Signoli M, Fozzati L, Aboudharam G, Raoult D, and Drancourt M
- Subjects
- Burial, DNA, Bacterial genetics, Genotype, Geography, History, Medieval, Humans, Italy, Plague immunology, High-Throughput Nucleotide Sequencing methods, Plague history, Plague microbiology, Yersinia pestis genetics
- Abstract
Background: Historical records suggest that multiple burial sites from the 14th-16th centuries in Venice, Italy, were used during the Black Death and subsequent plague epidemics., Methodology/principal Findings: High throughput, multiplexed real-time PCR detected DNA of seven highly transmissible pathogens in 173 dental pulp specimens collected from 46 graves. Bartonella quintana DNA was identified in five (2.9%) samples, including three from the 16th century and two from the 15th century, and Yersinia pestis DNA was detected in three (1.7%) samples, including two from the 14th century and one from the 16th century. Partial glpD gene sequencing indicated that the detected Y. pestis was the Orientalis biotype., Conclusions: These data document for the first time successive plague epidemics in the medieval European city where quarantine was first instituted in the 14th century.
- Published
- 2011
- Full Text
- View/download PDF
45. Evidence of a louse-borne outbreak involving typhus in Douai, 1710-1712 during the war of Spanish succession.
- Author
-
Nguyen-Hieu T, Aboudharam G, Signoli M, Rigeade C, Drancourt M, and Raoult D
- Subjects
- Animals, History, 18th Century, Humans, Typhus, Epidemic Louse-Borne transmission, Disease Outbreaks, Insect Vectors, Phthiraptera microbiology, Typhus, Epidemic Louse-Borne epidemiology
- Abstract
Background: The new field of paleomicrobiology allows past outbreaks to be identified by testing dental pulp of human remains with PCR., Methods: We identified a mass grave in Douai, France dating from the early XVIII(th) century. This city was besieged during the European war of Spanish succession. We tested dental pulp from 1192 teeth (including 40 from Douai) by quantitative PCR (qPCR) for R. prowazekii and B. quintana. We also used ultra-sensitive suicide PCR to detect R. prowazekii and genotyped positive samples., Results and Discussion: In the Douai remains, we identified one case of B. quintana infection (by qPCR) and R. prowazekii (by suicide PCR) in 6/21 individuals (29%). The R. prowazekii was genotype B, a genotype previously found in a Spanish isolate obtained in the first part of the XX(th) century., Conclusion: Louse-borne outbreaks were raging during the XVIII(th) century; our results support the hypothesis that typhus was imported into Europe by Spanish soldiers from America.
- Published
- 2010
- Full Text
- View/download PDF
46. Distinct clones of Yersinia pestis caused the black death.
- Author
-
Haensch S, Bianucci R, Signoli M, Rajerison M, Schultz M, Kacki S, Vermunt M, Weston DA, Hurst D, Achtman M, Carniel E, and Bramanti B
- Subjects
- Base Sequence, DNA, Bacterial analysis, Disease Outbreaks, Epidemics, Europe, Genetic Markers, Genotype, Humans, Mass Screening, Molecular Sequence Data, Phylogeny, Plague diagnosis, Plague epidemiology, Plague genetics, Plague microbiology, Sequence Homology, Nucleic Acid, Yersinia pestis classification, Yersinia pestis genetics, Plague etiology, Plague transmission, Yersinia pestis physiology
- Abstract
From AD 1347 to AD 1353, the Black Death killed tens of millions of people in Europe, leaving misery and devastation in its wake, with successive epidemics ravaging the continent until the 18(th) century. The etiology of this disease has remained highly controversial, ranging from claims based on genetics and the historical descriptions of symptoms that it was caused by Yersinia pestis to conclusions that it must have been caused by other pathogens. It has also been disputed whether plague had the same etiology in northern and southern Europe. Here we identified DNA and protein signatures specific for Y. pestis in human skeletons from mass graves in northern, central and southern Europe that were associated archaeologically with the Black Death and subsequent resurgences. We confirm that Y. pestis caused the Black Death and later epidemics on the entire European continent over the course of four centuries. Furthermore, on the basis of 17 single nucleotide polymorphisms plus the absence of a deletion in glpD gene, our aDNA results identified two previously unknown but related clades of Y. pestis associated with distinct medieval mass graves. These findings suggest that plague was imported to Europe on two or more occasions, each following a distinct route. These two clades are ancestral to modern isolates of Y. pestis biovars Orientalis and Medievalis. Our results clarify the etiology of the Black Death and provide a paradigm for a detailed historical reconstruction of the infection routes followed by this disease.
- Published
- 2010
- Full Text
- View/download PDF
47. [Historical and biological approaches to the study of Modern Age French plague mass burials].
- Author
-
Bianuccii R, Tzortzis S, Fornaciari G, and Signoli M
- Subjects
- France, History, 16th Century, History, 17th Century, History, 18th Century, Humans, Burial history, Plague history
- Abstract
The "Black Death" and subsequent epidemics from 1346 to the early 18th century spread from the Caspian Sea all over Europe six hundred years after the outbreak of the Justinian plague (541-767 AD). Plague has been one of the most devastating infectious diseases that affected the humankind and has caused approximately 200 million human deaths historically. Here we describe the different approaches adopted in the study of several French putative plague mass burials dating to the Modern Age (16th-18th centuries). Through complementation of historical, archaeological and paleobiological data, ample knowledge of both the causes that favoured the spread of the Medieval plague in cities, towns and small villages and of the modification of the customary funerary practices in urban and rural areas due to plague are gained.
- Published
- 2010
48. Technical note: a rapid diagnostic test detects plague in ancient human remains: an example of the interaction between archeological and biological approaches (southeastern France, 16th-18th centuries).
- Author
-
Bianucci R, Rahalison L, Massa ER, Peluso A, Ferroglio E, and Signoli M
- Subjects
- Antibodies, Monoclonal, France, History, 16th Century, History, 17th Century, History, 18th Century, Humans, Sensitivity and Specificity, Bacterial Proteins analysis, Chromatography methods, Paleopathology methods, Plague diagnosis, Soil analysis
- Abstract
A rapid diagnostic test (RDT) that detects Yersinia pestis F1 antigen was applied to 28 putative plague victims exhumed from seven burial sites in southeastern France dating to the 16th-18th centuries. Yersinia pestis F1 antigen was detected in 19 of the 28 (67.9%) samples. The 27 samples used as negative controls yielded negative results. Soil samples taken from archeological sites related to both positive and negative samples tested negative for F1 antigen. The detection threshold of the RDT for plague (0.5 ng/ml) is sufficient for a preliminary retrospective diagnosis of Y. pestis infection in human remains. The high specificity and sensitivity of the assay were confirmed. For two sites positive to F1 antigen (Lambesc and Marseille), Y. pestis-specific DNA (pla gene) had been identified previously by PCR-sequence based analyses. Specifically, the positive results for two samples, from the Lambesc cemetery and the Marseille pit burial, matched those previously reported using PCR. Independent analyses in Italy and France of different samples taken from the same burial sites (Draguignan and Martigues) led to the identification of both Y. pestis F1 antigen and Y. pestis pla and gplD genes. These data are clear evidence of the presence of Y. pestis in the ancient human remains examined in this study., ((c) 2008 Wiley-Liss, Inc.)
- Published
- 2008
- Full Text
- View/download PDF
49. [Oro-dental paleo-epidemiology: occurrences of the plague in the 18th century among the Capuchins of Ferrières and Délos (Martigues, Bouches du Rhône)].
- Author
-
Switajski-Chautard M, Tzortzis S, Signoli M, and Foti B
- Subjects
- Alveolar Bone Loss history, Dental Calculus history, Dental Caries history, Dental Enamel Hypoplasia history, France, History, 18th Century, Humans, Oral Hygiene history, Tooth Attrition history, Plague history, Tooth Diseases history
- Published
- 2007
50. [A rapid diagnostic test for plague detects Yersinia pestis F1 antigen in ancient human remains].
- Author
-
Bianucci R, Rahalison L, Ferroglio E, Massa ER, and Signoli M
- Subjects
- Adolescent, Adult, Bacterial Outer Membrane Proteins genetics, Bacterial Proteins genetics, Bone and Bones microbiology, Cadaver, DNA, Bacterial analysis, Dental Pulp microbiology, Double-Blind Method, France epidemiology, History, 16th Century, History, 17th Century, History, 18th Century, Humans, Plague diagnosis, Plague epidemiology, Plague microbiology, Plasminogen Activators genetics, Polymerase Chain Reaction methods, Sensitivity and Specificity, Yersinia pestis classification, Yersinia pestis genetics, Yersinia pestis immunology, Antigens, Bacterial analysis, Bacterial Proteins analysis, Disease Outbreaks history, Immunoassay methods, Plague history, Reagent Strips, Yersinia pestis isolation & purification
- Abstract
A rapid diagnostic dipstick test (RDT) that detects Yersinia pestis F1 antigen has been recently applied on 18 putative plague victims exhumed from four archaeological burial sites in southeastern France dating back to the 16(th), 17(th) and 18(th) centuries. The Y. pestis antigen F1 was detected in 12 ancient samples out of 18 (67%). Negative controls confirmed their negativity (100%). Our results emphasize that the detection threshold of the RDT for plague (0.5 ng/ml) is sufficient for a first retrospective diagnosis of Y. pestis infection in ancient remains, and confirm the high specificity and sensitivity of the assay. Double-blind analyses performed by using two different techniques (RDT and 'suicide PCR') led us to the identification of the Y. pestis F1 antigen and the Y. pestis pla and gplD genes. These data provide clear evidence of the presence of Y. pestis in the examined specimens.
- Published
- 2007
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.