645 results on '"M. Seeger"'
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2. Spatial distribution of argan tree influence on soil properties in southern Morocco
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M. Kirchhoff, T. Romes, I. Marzolff, M. Seeger, A. Aït Hssaine, and J. B. Ries
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Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Abstract
The endemic argan tree (Argania spinosa) populations in southern Morocco are highly degraded due to overbrowsing, illegal firewood extraction and the expansion of intensive agriculture. Bare areas between the isolated trees increase due to limited regrowth; however, it is unknown if the trees influence the soil of the intertree areas. Hypothetically, spatial differences in soil parameters of the intertree area should result from the translocation of litter or soil particles (by runoff and erosion or wind drift) from canopy-covered areas to the intertree areas. In total, 385 soil samples were taken around the tree from the trunk along the tree drip line (within and outside the tree area) and the intertree area between two trees in four directions (upslope, downslope and in both directions parallel to the slope) up to 50 m distance from the tree. They were analysed for gravimetric soil water content, pH, electrical conductivity, percolation stability, total nitrogen content (TN), content of soil organic carbon (SOC) and C/N ratio. A total of 74 tension disc infiltrometer experiments were performed near the tree drip line, within and outside the tree area, to measure the unsaturated hydraulic conductivity. We found that the tree influence on its surrounding intertree area is limited, with, e.g., SOC and TN content decreasing significantly from tree trunk (4.4 % SOC and 0.3 % TN) to tree drip line (2.0 % SOC and 0.2 % TN). However, intertree areas near the tree drip line (1.3 % SOC and 0.2 % TN) differed significantly from intertree areas between two trees (1.0 % SOC and 0.1 % TN) yet only with a small effect. Trends for spatial patterns could be found in eastern and downslope directions due to wind drift and slope wash. Soil water content was highest in the north due to shade from the midday sun; the influence extended to the intertree areas. The unsaturated hydraulic conductivity also showed significant differences between areas within and outside the tree area near the tree drip line. This was the case on sites under different land usages (silvopastoral and agricultural), slope gradients or tree densities. Although only limited influence of the tree on its intertree area was found, the spatial pattern around the tree suggests that reforestation measures should be aimed around tree shelters in northern or eastern directions with higher soil water content or TN or SOC content to ensure seedling survival, along with measures to prevent overgrazing.
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- 2021
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3. Development and analysis of the Soil Water Infiltration Global database
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M. Rahmati, L. Weihermüller, J. Vanderborght, Y. A. Pachepsky, L. Mao, S. H. Sadeghi, N. Moosavi, H. Kheirfam, C. Montzka, K. Van Looy, B. Toth, Z. Hazbavi, W. Al Yamani, A. A. Albalasmeh, M. Z. Alghzawi, R. Angulo-Jaramillo, A. C. D. Antonino, G. Arampatzis, R. A. Armindo, H. Asadi, Y. Bamutaze, J. Batlle-Aguilar, B. Béchet, F. Becker, G. Blöschl, K. Bohne, I. Braud, C. Castellano, A. Cerdà, M. Chalhoub, R. Cichota, M. Císlerová, B. Clothier, Y. Coquet, W. Cornelis, C. Corradini, A. P. Coutinho, M. B. de Oliveira, J. R. de Macedo, M. F. Durães, H. Emami, I. Eskandari, A. Farajnia, A. Flammini, N. Fodor, M. Gharaibeh, M. H. Ghavimipanah, T. A. Ghezzehei, S. Giertz, E. G. Hatzigiannakis, R. Horn, J. J. Jiménez, D. Jacques, S. D. Keesstra, H. Kelishadi, M. Kiani-Harchegani, M. Kouselou, M. Kumar Jha, L. Lassabatere, X. Li, M. A. Liebig, L. Lichner, M. V. López, D. Machiwal, D. Mallants, M. S. Mallmann, J. D. de Oliveira Marques, M. R. Marshall, J. Mertens, F. Meunier, M. H. Mohammadi, B. P. Mohanty, M. Pulido-Moncada, S. Montenegro, R. Morbidelli, D. Moret-Fernández, A. A. Moosavi, M. R. Mosaddeghi, S. B. Mousavi, H. Mozaffari, K. Nabiollahi, M. R. Neyshabouri, M. V. Ottoni, T. B. Ottoni Filho, M. R. Pahlavan-Rad, A. Panagopoulos, S. Peth, P.-E. Peyneau, T. Picciafuoco, J. Poesen, M. Pulido, D. J. Reinert, S. Reinsch, M. Rezaei, F. P. Roberts, D. Robinson, J. Rodrigo-Comino, O. C. Rotunno Filho, T. Saito, H. Suganuma, C. Saltalippi, R. Sándor, B. Schütt, M. Seeger, N. Sepehrnia, E. Sharifi Moghaddam, M. Shukla, S. Shutaro, R. Sorando, A. A. Stanley, P. Strauss, Z. Su, R. Taghizadeh-Mehrjardi, E. Taguas, W. G. Teixeira, A. R. Vaezi, M. Vafakhah, T. Vogel, I. Vogeler, J. Votrubova, S. Werner, T. Winarski, D. Yilmaz, M. H. Young, S. Zacharias, Y. Zeng, Y. Zhao, H. Zhao, and H. Vereecken
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Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Abstract
In this paper, we present and analyze a novel global database of soil infiltration measurements, the Soil Water Infiltration Global (SWIG) database. In total, 5023 infiltration curves were collected across all continents in the SWIG database. These data were either provided and quality checked by the scientists who performed the experiments or they were digitized from published articles. Data from 54 different countries were included in the database with major contributions from Iran, China, and the USA. In addition to its extensive geographical coverage, the collected infiltration curves cover research from 1976 to late 2017. Basic information on measurement location and method, soil properties, and land use was gathered along with the infiltration data, making the database valuable for the development of pedotransfer functions (PTFs) for estimating soil hydraulic properties, for the evaluation of infiltration measurement methods, and for developing and validating infiltration models. Soil textural information (clay, silt, and sand content) is available for 3842 out of 5023 infiltration measurements ( ∼ 76%) covering nearly all soil USDA textural classes except for the sandy clay and silt classes. Information on land use is available for 76 % of the experimental sites with agricultural land use as the dominant type ( ∼ 40%). We are convinced that the SWIG database will allow for a better parameterization of the infiltration process in land surface models and for testing infiltration models. All collected data and related soil characteristics are provided online in *.xlsx and *.csv formats for reference, and we add a disclaimer that the database is for public domain use only and can be copied freely by referencing it. Supplementary data are available at https://doi.org/10.1594/PANGAEA.885492 (Rahmati et al., 2018). Data quality assessment is strongly advised prior to any use of this database. Finally, we would like to encourage scientists to extend and update the SWIG database by uploading new data to it.
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- 2018
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4. Soil erosion in sloping vineyards under conventional and organic land use managements (Saar-Mosel Valley, Germany)
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M. Kirchhoff, J. Rodrigo-Comino, M. Seeger, and J.B. Ries
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soil erosion ,organic vineyards ,conventional vineyards ,rainfall simulation ,gerlach trough ,Geography (General) ,G1-922 - Abstract
German vineyards are one of the land uses most prone to soil erosion. Due to their placement on mainly steep slopes and non-conservative cultivation practices, runoff and soil loss are a serious problem for wine growers. In the Saar-Mosel valley (Rhineland-Palatinate, Germany), there is a tendency towards organic management of vineyards with protective grass cover in the inter-rows. Since there is a lack of information about organic-conventional tillage in German vineyards related to soil erosion processes, this study presents a comparison between these two soil management practices. For this purpose, 22 rainfall simulations were performed as well as a medium-term monitoring by using 4-paired Gerlach troughs in two experimental sites in the Saar-Mosel valley. The mean simulated runoff coefficient and suspended sediment load in conventional vineyards amounted up to 23.3% and 33.75 g m-2, respectively. In the organic site, runoff and soil loss were only recorded in one out of the 11 simulations. Runoff and sediment was collected in the Gerlach troughs for 33 natural rainfall events. In the conventional vineyard, the total measured soil loss was 3314.63 g m-1 and 6503.77 g m-1 and total runoff volumes were 105.52 L m-1 and 172.58 L m-1. In the organic site, total soil losses reached 143.16 g m-1 and 258.89 g m-1 and total runoff was 21.65 L m-1 and 12.69 L m-1. When soil loss was measured without corresponding runoff or precipitation, soil erosion was activated by tillage or trampling. Finally, the conventional vineyard showed a higher variability in soil loss and runoff suggesting less predictable results.
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- 2017
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5. Experiments as tools in geomorphology
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M. Seeger
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experiments ,soil erosion ,experimental theory ,experimental classification ,soil erosion measurements ,Geography (General) ,G1-922 - Abstract
In this introductory article to the special issue “Experiments in geomorphology”, the fundamentals of experiments in science, and especially in earth science and geomorphology, are discussed. This is of special interest, as geomorphological sciences crosses scales and thus, different types of experiments are applied for highly variable tasks: (i) Real experiments: to test hypotheses on the process interaction of well defined landscape components; (ii) Quasi experiments: the integrated response of pre-defined morphological units is quantified here; (iii) Hybrid experiments: spatial stratification of the landscape according to statistically evaluable characteristics. A short review on different types of experiments in geomorphology is given, focusing on the processes relevant for soil erosion: splash, inter-rill and linear erosion. Finally, the contributions to the special issue are classified according to the classification of experiments given.
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- 2017
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6. Procesos de erosión en diferentes unidades del relieve: relaciones entre forma y proceso
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T. Iserloh, S. Wirtz, M. Seeger, I. Marzolff, and J.B. Ries
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relief units ,erosion processes ,rainfall simulation experiments ,rill experiments ,gully monitoring ,Geography (General) ,G1-922 - Abstract
Las unidades geomorfológicas están relacionadas con ciertos procesos y con la historia de su formación. Además, se definen por sus formas y materiales. En este estudio se investigan los procesos de erosión en diferentes unidades de relieve. Simulaciones de lluvia, experimentos en rigolas y seguimientos a través de fotografía aérea se llevaron a cabo en dunas, glacis, rellenos holocenos, taludes y terrazas franco-arcillosos de origen cuaternario, con el objeto de conocer la variación en la intensidad de los procesos. Para ello, se evaluaron el impacto de las gotas de lluvia, la generación de escorrentía, la erosión en inter-rigolas y rigolas durante varios años. Las áreas de estudio se situaron en el NE y SE de España, sur de Marruecos y norte de Burkina Faso. Los resultados muestras claramente que los procesos medidos son muy diferentes entre sí según la formación de las propias unidades de relieve. Las dunas y los rellenos holocenos en los valles son altamente susceptibles a la erosión por el impacto de las gotas de lluvia y la formación de regueros. Por el contrario, las terrazas sobre materiales franco-arcillosos muestran baja susceptibilidad a los procesos de erosión. Por lo tanto, se puede concluir que las distintas unidades de relieve muestran diferentes dominancia e intensidad de procesos. Las diferencias son más significativas con el incremento de la escala y la complejidad del proceso erosivo: el crecimiento de las cárcavas varía mucho más entre diferentes unidades que los efectos del impacto de la gota de lluvia y la formación de rigolas.
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- 2017
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7. Variación espacio-temporal de los procesos hidrológicos del suelo en viñedos con elevadas pendientes (Valle del Ruwer-Mosela, Alemania)
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J. Rodrigo-Comino, M. Seeger, J. M. Senciales, J. D. Ruiz-Sinoga, and J. B. Ries
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viñedos ,permeámetro de guelph ,infiltración ,procesos hidrológicos ,valle del ruwer-mosela ,Geography (General) ,G1-922 - Abstract
Los suelos de los viñedos del valle del Ruwer-Mosela (Alemania) cultivados en elevadas pendientes muestran una alta variabilidad espacio-temporal en su dinámica hidrológica. A través del uso del permeámetro de Guelph se realizaron un total de cuarenta y dos experimentos en viñedos jóvenes y viejos para medir las tasas de infiltración, la conductividad hidráulica y el potencial del flujo matricial. Los ensayos fueron realizados antes de la vendimia coincidiendo con la primavera y el verano (con el suelo relativamente seco y sin actividad reciente de pisadas y maquinaria), y tras la cosecha en otoño (con un manto edáfico húmedo, con señales de compactación y un menor contenido de materia orgánica). En general, todos los parámetros analizados fueron mucho más elevados en los viñedos jóvenes que en los viejos y aumentaron tras la vendimia. En las viñas jóvenes los tres parámetros analizados mostraron sus mayores valores en la parte media (398,5 mm h-1 de tasa de infiltración, 89,2 mm h-1 de conductividad hidráulica y 62,8 mm2 h-1 de potencial del flujo matricial). Por su parte, en las viñas viejas se observó un descenso de la infiltración desde la parte superior a la inferior de la parcela (desde 42,5 a 16,8 mm h-1). Los resultados de la conductividad hidráulica y el potencial del flujo matricial marcaron también una dinámica hidrológica parecida: descenso de los parámetros conforme se desciende en la parcela (13,2 a 5,4 mm h-1 y desde 5,5 a 2,5 mm2 h-1). Por ultimo, se observó cómo el factor que mayor coeficiente de determinación obtuvo con estas dinámicas hidrológicas fue la variación del contenido de agua en el suelo y las prácticas agrícolas.
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- 2016
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8. Rainfall and human activity impacts on soil losses and rill erosion in vineyards (Ruwer Valley, Germany)
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J. Rodrigo Comino, C. Brings, T. Lassu, T. Iserloh, J. M. Senciales, J. F. Martínez Murillo, J. D. Ruiz Sinoga, M. Seeger, and J. B. Ries
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Geology ,QE1-996.5 ,Stratigraphy ,QE640-699 - Abstract
Vineyards are one of the eco-geomorphological systems most conditioned by human activity in Germany. The vineyards of the Ruwer Valley (Germany) are characterized by high soil erosion rates and rill problems on steep slopes (between 23 and 26°) caused by the increasingly frequent heavy rainfall events as well as deterioration due to incorrect land use managements. The objective of this paper is to determine and to quantify the hydrological and erosive phenomena in one vineyard in Germany during different seasons and under different management conditions (before, during and after vintage). For this purpose, a combined methodology was applied. Climatic (rainfall depth distributions and return periods), pedological (soil analysis and classification), geomorphological (sediment movements and rills evolution) and biological (botanic marks on the vines) variables were used on the two experimental plots in the village of Waldrach (Trier, region of Rhineland-Palatinate). The results showed high infiltration rates (near 100 %) and subsurface flow which were detected by rainfall simulations performed at different times of the year (between September and December). The highest variations of the monitored rills (lateral and frontal movements) were noted before and during vintage, when footsteps occurred concentrated during a short period of time (between September and October). Finally, two maps of soil loss were generated, indicated by botanic marks on the graft union of the vines. 62.5 t ha−1 yr−1 soil loss was registered in the experimental plots of the new vineyards (2 years), while 3.4 t ha−1 yr−1 was recorded in the old one (35 years).
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- 2015
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9. Characterization of complex pebble movement patterns in channel flow – a laboratory study
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K. Becker, O. Gronz, S. Wirtz, M. Seeger, C. Brings, T. Iserloh, M.C. Casper, and J.B. Ries
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pebble movement forms, pebble movement patterns, cross-section shape, channel flow, laboratory channel study. ,Geography (General) ,G1-922 - Abstract
For a long time, studies concerning erosion caused by concentrated overland flow mainly dealt with the erosion and the transport of fine material. More recent studies have shown that rock fragments reduce the intensity of soil erosion processes on the one hand, but on the other hand rock fragment movements also have been observed both in the rill- and interrill erosion processes. However, there is little knowledge about the movement process of rock fragments in shallow channel flow. Are certain movement patterns typical for different shapes? Are there relationships between movement patterns and slope and flow velocity? Are all these patterns and relationships reproducible? To answer these questions, we performed laboratory channel experiments. With these experiments, we could obtain information about movement patterns of pebbles, by varying the following parameters: shape (flat, ellipsoidal, nearly spherical), size (diameter between 1.97 and 4.0 cm) and channel slope (5°, 10°). During the experiments, a high-speed camera was used to capture the motion of eight specially painted pebbles. The resulting image sequences were processed using both automatic image processing and manual visual inspection. Besides the movement patterns, the pebbles velocity, the water velocity and the water depth were estimated. We could show that there were different movement patterns depending on the shape and the slope. For the 5° experiments, the big, flat pebbles lie at the beginning of the tests. After the following yawing, the pebbles mainly showed the movement form rolling around the longest axis. For the 10° experiments the big, flat pebbles showed the same movement pattern firstly, but later in the sequence, they started to roll around their shortest axis and in the end this movement form was combined with saltation. These patterns are described using a simple symbolic language: sequences of pictograms describe the consecutive movement forms. Furthermore, we detected five different velocity groups of the pebbles for each slope: different cross-section shapes of the pebbles result in different acceleration behavior. The methodology is limited to clear water in laboratory use. Even a larger water depth restricts the image processing. Thus, in the future the experiments will be combined with a small sensor that is implanted in the pebbles and measures forces (acceleration), compass (magnetic flux density) and rotations (gyroscope).
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- 2015
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10. Thermal shock and splash effects on burned gypseous soils from the Ebro Basin (NE Spain)
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J. León, M. Seeger, D. Badía, P. Peters, and M. T. Echeverría
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Geology ,QE1-996.5 ,Stratigraphy ,QE640-699 - Abstract
Fire is a natural factor of landscape evolution in Mediterranean ecosystems. The middle Ebro Valley has extreme aridity, which results in a low plant cover and high soil erodibility, especially on gypseous substrates. The aim of this research is to analyze the effects of moderate heating on physical and chemical soil properties, mineralogical composition and susceptibility to splash erosion. Topsoil samples (15 cm depth) were taken in the Remolinos mountain slopes (Ebro Valley, NE Spain) from two soil types: Leptic Gypsisol (LP) in a convex slope and Haplic Gypsisol (GY) in a concave slope. To assess the heating effects on the mineralogy we burned the soils at 105 and 205 °C in an oven and to assess the splash effects we used a rainfall simulator under laboratory conditions using undisturbed topsoil subsamples (0–5 cm depth of Ah horizon). LP soil has lower soil organic matter (SOM) and soil aggregate stability (SAS) and higher gypsum content than GY soil. Gypsum and dolomite are the main minerals (>80%) in the LP soil, while gypsum, dolomite, calcite and quartz have similar proportions in GY soil. Clay minerals (kaolinite and illite) are scarce in both soils. Heating at 105 °C has no effect on soil mineralogy. However, heating to 205 °C transforms gypsum to bassanite, increases significantly the soil salinity (EC) in both soil units (LP and GY) and decreases pH only in GY soil. Despite differences in the content of organic matter and structural stability, both soils show no significant differences (P < 0.01) in the splash erosion rates. The size of pores is reduced by heating, as derived from variations in soil water retention capacity.
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- 2014
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11. Hydraulic factors and erodibility on the edafoclimatic gradient Ebro Depression-Pyrennes
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M. Seeger and C. Frevel
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Geography (General) ,G1-922 - Abstract
Se han estudiado los suelos en cinco áreas de muestreo a lo largo de un transecto entre la Depresión Central del Ebro y el Pirineo Central español con el fin de detectar un posible gradiente en cuanto a la erosionabilidad y a diferentes parámetros hídricos del suelo. El estudio de los suelos de este transecto muestra ciertas similitudes, pudiendo observarse una ligera tendencia a la disminución de la erosionabilidad desde la Depresión del Ebro hasta el Pirineo Central. La erosionabilidad del material matricial del suelo es, de todas formas, alta en todas las áreas estudiadas, siendo moderada de forma significativa por la pedregosidad en las zonas situadas fuera de la Depresión central del Ebro. De los resultados obtenidos se deduce que las diferencias en la producción de sedimento dependen primordialmente de la cobertura vegetal y de la erosividad de las precipitaciones. Las condiciones hídricas del suelo muestra ser dentro de cada área estudiada mucho más variable que a lo largo del transecto. Se han llegado a estimar en zonas erosionadas valores de capacidad de retención de agua disponible extremadamente bajos. De igual forma, todos los suelos muestran conductividades hidraúlicas muy bajas en condiciones no saturadas. En consecuencia, las precipitaciones generan una elevada escorrentía, que a su vez erosiona los suelos e impide su recarga hídrica. Del conjunto de características físicas de los suelos entre la depresión Central del Ebro y el Pirineo Central se puede deducir que las capacidades hidraúlicas tenderán a deteriorarse a causa de la alta erosividad de la matriz edáfica. De este modo, las condiciones para la recuperación de la cubierta vegetal tras el los cambios de uso del suelo serán cada vez más adversas
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- 2013
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12. Las cuencas experimentales de Arnás y San Salvador en el Pirineo Central español : escorrentía y transporte de sedimento
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J. M. García Ruiz, C. Marti-Bono, J. Arnáez Vadillo, S. Beguería Portugués, A. Lorente Grima, and M. Seeger
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Geography (General) ,G1-922 - Abstract
Las cuencas experimentales de Arnás y San Salvador, localizadas en la cuenca alta del río Aragón, han sido equipadas con estación meteorológica completa, flume e instrumentos para la medición continua del caudal y del sedimentos transportado (en solución y en suspensión). Una trampa de sedimento a la entrada del flume permite controlar periódicamente la carga de fondo. Los resultados obtenidos confirman la existencia de grandes diferencias en la respuesta hidrológica y el transporte de sedimento entre la cuenca forestal (San Salvador) y la cuenca de campos abandonados (Arnás). La primera muestra una respuesta mucho más moderada debido básicamente a los procesos de interceptación y a la mayor profundidad de los suelos. Las relaciones entre precipitación y pico de caudal, así como entre este último y la concentración de sedimento en suspensión son muy bajas, aumentando notablemente si se contemplan por separado las crecidas de estación fría. La escorrentía se genera sobre todo por procesos de saturación. Las fuentes de sedimento se localizan en el cauce y sus proximidades.
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- 2013
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13. Runoff generation on abandoned fields in the Central Ebro Basin. Results from modelling
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M. Seeger and J. B. Ries
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Geography (General) ,G1-922 - Abstract
The results from several rainfall simulations performed on two abandoned fields of different ages in the Central Ebro Depression have been analysed by application of the physically based hydraulic model HILLFLOW 1D. The data gained by the simulations was used to parameterise the model. Afterwards, the runoff generation characteristics were determined by simulation of different rainfall intensities and different macroporosities of the soil. The young fallow land shows a minimum intensity for runoff generation of 6 mm h-1. An increase of the rainfall intensity leads rapidly to a growing runoff coefficient, being the value modelled for 30 mm h-1 nearly the same as the simulated one (40 mm h-1). Another con - clusion of the simulations and their modelling is the homogeneity of the soils on the young fallow land, with no macroporosity all over the profile. On the other hand, the rainfall simulations and the modelling on the old fallow land show a high variability of rainfall-runoff response patterns, strongly conditioned by the presence of macropores. They are distributed very irregularly throughout the soil of the old fallow land. In both cases, water infiltrates only little into the soil matrix, for that measures for enhancing soil hydraulic properties are needed.
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- 2013
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14. Effect of hydraulic parameters on sediment transport capacity in overland flow over erodible beds
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M. Ali, G. Sterk, M. Seeger, M. Boersema, and P. Peters
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Technology ,Environmental technology. Sanitary engineering ,TD1-1066 ,Geography. Anthropology. Recreation ,Environmental sciences ,GE1-350 - Abstract
Sediment transport is an important component of the soil erosion process, which depends on several hydraulic parameters like unit discharge, mean flow velocity, and slope gradient. In most of the previous studies, the impact of these hydraulic parameters on transport capacity was studied for non-erodible bed conditions. Hence, this study aimed to examine the influence of unit discharge, mean flow velocity and slope gradient on sediment transport capacity for erodible beds and also to investigate the relationship between transport capacity and composite force predictors, i.e. shear stress, stream power, unit stream power and effective stream power. In order to accomplish the objectives, experiments were carried out in a 3.0 m long and 0.5 m wide flume using four well sorted sands (0.230, 0.536, 0.719, 1.022 mm). Unit discharges ranging from 0.07 to 2.07 × 10−3 m2 s−1 were simulated inside the flume at four slopes (5.2, 8.7, 13.2 and 17.6%) to analyze their impact on sediment transport rate. The sediment transport rate measured at the bottom end of the flume by taking water and sediment samples was considered equal to sediment transport capacity, because the selected flume length of 3.0 m was found sufficient to reach the transport capacity. The experimental result reveals that the slope gradient has a stronger impact on transport capacity than unit discharge and mean flow velocity due to the fact that the tangential component of gravity force increases with slope gradient. Our results show that unit stream power is an optimal composite force predictor for estimating transport capacity. Stream power and effective stream power can also be successfully related to the transport capacity, however the relations are strongly dependent on grain size. Shear stress showed poor performance, because part of shear stress is dissipated by bed irregularities, bed form evolution and sediment detachment. An empirical transport capacity equation was derived, which illustrates that transport capacity can be predicted from median grain size, total discharge and slope gradient.
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- 2012
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15. Identification and regionalization of dominant runoff processes – a GIS-based and a statistical approach
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C. Müller, H. Hellebrand, M. Seeger, and S. Schobel
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Technology ,Environmental technology. Sanitary engineering ,TD1-1066 ,Geography. Anthropology. Recreation ,Environmental sciences ,GE1-350 - Abstract
In this study two approaches are presented to identify Dominant Runoff Processes (DRP) with respect to regionalization. The approaches are a simplification of an existing method to determine DRP by means of an extensive field campaign. The first approach combines the permeability of the substratum, land-use and slope of the basin in a GIS-based analysis. The second approach makes use of discriminant analysis of the physiographic characteristics of the basin and links it to the GIS analysis. The results of the developed approaches are maps, which identify dominant runoff processes and represent a spatial distribution of the hydrological behaviour of the soil during prolonged rainfall events. The approaches have been developed in a micro-scale basin (Germany). An additional meso-scale basin was introduced in which the two approaches were applied for quality control. The thus generated maps for the micro-scale basin were compared with an existing DRP map, which was derived with the existing method. The first approach showed a resemblance of 79% when compared to this map, whereas the second approach showed only a resemblance of 51%. The generated maps for the meso-scale basin were compared to DRP that were determined point wise according to the existing method. The first approach showed in this case a resemblance of 81%, whereas the second approach showed a resemblance of 68%. Therefore, the first approach is preferred to the second approach when accuracy, data input and calculation time are concerned.
- Published
- 2009
16. Supplementary Figure from PTEN Loss Contributes to Erlotinib Resistance in EGFR-Mutant Lung Cancer by Activation of Akt and EGFR
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Roman K. Thomas, Matthew Meyerson, William Pao, Hamid Kashkar, Levi A. Garraway, John D. Minna, Adi F. Gazdar, Michael Peyton, Luc Girard, Craig Mermel, Martin Peifer, Kathrin Michel, Peter Frommolt, Florian Fischer, Jonathan Weiss, Jens M. Seeger, Thomas Zander, Rosalia Rabinovsky, Stefanie Heynck, Barbara A. Weir, Mirjam Koker, and Martin L. Sos
- Abstract
Supplementary Figure from PTEN Loss Contributes to Erlotinib Resistance in EGFR-Mutant Lung Cancer by Activation of Akt and EGFR
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- 2023
17. Data from PTEN Loss Contributes to Erlotinib Resistance in EGFR-Mutant Lung Cancer by Activation of Akt and EGFR
- Author
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Roman K. Thomas, Matthew Meyerson, William Pao, Hamid Kashkar, Levi A. Garraway, John D. Minna, Adi F. Gazdar, Michael Peyton, Luc Girard, Craig Mermel, Martin Peifer, Kathrin Michel, Peter Frommolt, Florian Fischer, Jonathan Weiss, Jens M. Seeger, Thomas Zander, Rosalia Rabinovsky, Stefanie Heynck, Barbara A. Weir, Mirjam Koker, and Martin L. Sos
- Abstract
Clinical resistance to epidermal growth factor receptor (EGFR) inhibition in lung cancer has been linked to the emergence of the EGFR T790M resistance mutation or amplification of MET. Additional mechanisms contributing to EGFR inhibitor resistance remain elusive. By applying combined analyses of gene expression, copy number, and biochemical analyses of EGFR inhibitor responsiveness, we identified homozygous loss of PTEN to segregate EGFR-dependent and EGFR-independent cells. We show that in EGFR-dependent cells, PTEN loss partially uncouples mutant EGFR from downstream signaling and activates EGFR, thereby contributing to erlotinib resistance. The clinical relevance of our findings is supported by the observation of PTEN loss in 1 out of 24 primary EGFR-mutant non–small cell lung cancer (NSCLC) tumors. These results suggest a novel resistance mechanism in EGFR-mutant NSCLC involving PTEN loss. [Cancer Res 2009;69(8):3256–61]
- Published
- 2023
18. Supplementary Materials & Methods and Figure Legend from PTEN Loss Contributes to Erlotinib Resistance in EGFR-Mutant Lung Cancer by Activation of Akt and EGFR
- Author
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Roman K. Thomas, Matthew Meyerson, William Pao, Hamid Kashkar, Levi A. Garraway, John D. Minna, Adi F. Gazdar, Michael Peyton, Luc Girard, Craig Mermel, Martin Peifer, Kathrin Michel, Peter Frommolt, Florian Fischer, Jonathan Weiss, Jens M. Seeger, Thomas Zander, Rosalia Rabinovsky, Stefanie Heynck, Barbara A. Weir, Mirjam Koker, and Martin L. Sos
- Abstract
Supplementary Materials & Methods and Figure Legend from PTEN Loss Contributes to Erlotinib Resistance in EGFR-Mutant Lung Cancer by Activation of Akt and EGFR
- Published
- 2023
19. Supplementary Table from PTEN Loss Contributes to Erlotinib Resistance in EGFR-Mutant Lung Cancer by Activation of Akt and EGFR
- Author
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Roman K. Thomas, Matthew Meyerson, William Pao, Hamid Kashkar, Levi A. Garraway, John D. Minna, Adi F. Gazdar, Michael Peyton, Luc Girard, Craig Mermel, Martin Peifer, Kathrin Michel, Peter Frommolt, Florian Fischer, Jonathan Weiss, Jens M. Seeger, Thomas Zander, Rosalia Rabinovsky, Stefanie Heynck, Barbara A. Weir, Mirjam Koker, and Martin L. Sos
- Abstract
Supplementary Table from PTEN Loss Contributes to Erlotinib Resistance in EGFR-Mutant Lung Cancer by Activation of Akt and EGFR
- Published
- 2023
20. Bioremoval of copper by filamentous fungi isolated from contaminated soils of Puchuncaví-Ventanas Central Chile
- Author
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M. Carvajal, P. Jeldres, A. Vergara, E. Lobaina, M. Olivares, D. Meza, A. Velásquez, F. Dorta, F. Jorquera, M. Seeger, F. Cereceda-Balic, and X. Fadic
- Subjects
Environmental Engineering ,Geochemistry and Petrology ,Environmental Chemistry ,General Medicine ,General Environmental Science ,Water Science and Technology - Published
- 2023
21. Towards Concurrent Data Sampling Using GPU Coprocessing.
- Author
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Mark M. Seeger and Stephen D. Wolthusen
- Published
- 2012
- Full Text
- View/download PDF
22. A model for partially asynchronous observation of malicious behavior.
- Author
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Mark M. Seeger and Stephen D. Wolthusen
- Published
- 2012
- Full Text
- View/download PDF
23. Rooting Android - Extending the ADB by an Auto-connecting WiFi-Accessible Service.
- Author
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Assem Nazar, Mark M. Seeger, and Harald Baier
- Published
- 2011
- Full Text
- View/download PDF
24. Manipulating Mobile Devices with a Private GSM Base Station - A Case Study.
- Author
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Christoph Kemetmüller, Mark M. Seeger, Harald Baier, and Christoph Busch 0001
- Published
- 2010
25. Benzodiazepine‐induced photosensitivity reactions: A compilation of cases from literature review with Naranjo causality assessment
- Author
-
Ashmal A. Ali, Merlyn Joseph, Phuong Phan, Noorulain Momin, Hamed I. Ali, and Christina M. Seeger
- Subjects
medicine.medical_specialty ,Clobazam ,medicine.drug_class ,Immunology ,Dermatology ,030226 pharmacology & pharmacy ,Benzodiazepines ,030207 dermatology & venereal diseases ,03 medical and health sciences ,0302 clinical medicine ,Photosensitivity ,Tetrazepam ,medicine ,Humans ,Immunology and Allergy ,Clorazepate ,Radiology, Nuclear Medicine and imaging ,Photosensitivity Disorders ,Benzodiazepine ,Dermatitis, Photoallergic ,business.industry ,General Medicine ,Middle Aged ,Alprazolam ,Female ,Naranjo Scale ,business ,Phototoxicity ,Algorithms ,Dermatitis, Phototoxic ,medicine.drug - Abstract
Objective Benzodiazepines have been reported to cause photosensitivity reactions. We characterized the clinical presentation and diagnosis of benzodiazepine-associated photosensitivity and adjudicated these cases for a causal association with benzodiazepines. Methods A literature search on PubMed's "MeSH" search feature and CINAHL (1964 to 2019) was performed using search terms: benzodiazepine, photosensitivity, and photosensitivity disorders/chemically induced. We applied the Naranjo scale, a standardized causality assessment algorithm, to identified cases. Results We identified 8 published cases, with 50% of patients being female with a mean age of 46.3 years. Alprazolam, tetrazepam, clobazam, and clorazepate induced phototoxic reactions. Chlordiazepoxide induced one photoallergic reaction. Photosensitivity occurred between 1-3 days (37.5%), 7-14 days (25%), and >14 days (25%). Photosensitivity resolved after drug discontinuation within 2 weeks (62.5%). Benzodiazepine rechallenge confirmed photosensitivity in 75% of cases. Photopatch testing was negative in two patients; however, these patients had positive oral provocation testing. However, an oral photoprovocation test, an ideal diagnostic test, was not administered to several patients. Despite these challenges, the Naranjo scale identified 5 cases as definite benzodiazepine-induced photosensitivity. Conclusion Five benzodiazepines induced photosensitivity reactions. Five patients showed a definite association with the Naranjo scale. Reporting to pharmacovigilance databases may help identify other benzodiazepines causing photosensitivity reactions.
- Published
- 2021
26. Mentorship Landscape and Common Practices in an Academic Pharmacy Association
- Author
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Shannon Kinney, Kristin M. Janzen, Kelly M. Shields, Jaclyn Tetenbaum-Novatt, Manas Mandal, Ryan E. Owens, Christina M. Seeger, Susan Smith, Emmeline Tran, Jamie L. Wagner, Kimberly Zitko, Justin Kinney, and Lea S. Eiland
- Subjects
General Medicine ,General Pharmacology, Toxicology and Pharmaceutics ,Education - Published
- 2023
27. Obesity Promotes Liver Carcinogenesis via Mcl-1 Stabilization Independent of IL-6Rα Signaling
- Author
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Sabine Gruber, Beate K. Straub, P. Justus Ackermann, Claudia M. Wunderlich, Jan Mauer, Jens M. Seeger, Hildegard Büning, Lukas Heukamp, Hamid Kashkar, Peter Schirmacher, Jens C. Brüning, and F. Thomas Wunderlich
- Subjects
Biology (General) ,QH301-705.5 - Abstract
Obesity increases the incidence of hepatocellular carcinoma (HCC) development in part through the activation of obesity-associated proinflammatory signaling. Here, we show that in lean mice, abrogation of IL-6Rα signaling protects against diethylnitrosamine (DEN)-induced HCC development. HCC protection occurs via Mcl-1 destabilization, thus promoting hepatocyte apoptosis. IL-6 regulates Mcl-1 stability via the inhibition of PP-1α expression, promoting GSK-3β inactivation. In addition, IL-6 suppresses expression of the Mcl-1 E3 ligase (Mule). Consequently, IL-6Rα deficiency activates PP-1α and Mule expression, resulting in increased Mcl-1 turnover and protection against HCC development. In contrast, in obesity, inhibition of PP-1α and Mule expression, leading to Mcl-1 stabilization, occurs independently of IL-6 signaling. Collectively, this study provides evidence that obesity inhibits hepatocyte apoptosis through Mcl-1 stabilization independent of IL-6 signaling, thus promoting liver carcinogenesis.
- Published
- 2013
- Full Text
- View/download PDF
28. ATP synthase modulation leads to an increase of spare respiratory capacity in HPV associated cancers
- Author
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Gian Paolo Marcuzzi, N. Würdemann, Jens M. Seeger, Steffen Wagner, Anamaria Đukić, Matthias Kirschberg, Jens Peter Klussmann, Slawomir Majewski, Hamid Kashkar, Alexander Quaas, Baki Akgül, Martin Hufbauer, Vjekoslav Tomaić, Claus Wittekindt, and Sandra Heuser
- Subjects
0301 basic medicine ,ATP5B ,Science ,Cell ,Oxidative phosphorylation ,Human papilloma virus ,Alphapapillomavirus ,medicine.disease_cause ,Article ,Oxidative Phosphorylation ,human papillomaviruses (HPV), cell metabolism, mitochondrial ATP-synthase (ATP5B), HPV-mediated tumorigenesis ,03 medical and health sciences ,0302 clinical medicine ,Viral life cycle ,medicine ,Humans ,Glycolysis ,Head and neck cancer ,Multidisciplinary ,biology ,ATP synthase ,Squamous Cell Carcinoma of Head and Neck ,Papillomavirus Infections ,virus diseases ,Basic Medical Sciences ,Oncogene Proteins, Viral ,Mitochondrial Proton-Translocating ATPases ,Survival Analysis ,female genital diseases and pregnancy complications ,3. Good health ,Oropharyngeal Neoplasms ,Tumor Virus Infections ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Cancer research ,biology.protein ,Medicine ,Female ,Carcinogenesis ,ATP synthase alpha/beta subunits ,Protein Binding - Abstract
Mucosal and skin cancers are associated with infections by human papillomaviruses (HPV). The manner how viral oncoproteins hijack the host cell metabolism to meet their own energy demands and how this may contribute to tumorigenesis is poorly understood. We now show that the HPV oncoprotein E7 of HPV8, HPV11 and HPV16 directly interact with the beta subunit of the mitochondrial ATP-synthase (ATP5B), which may therefore represent a conserved feature across different HPV genera. By measuring both glycolytic and mitochondrial activity we observed that the association of E7 with ATP5B was accompanied by reduction of glycolytic activity. Interestingly, there was a drastic increase in spare mitochondrial respiratory capacity in HPV8-E7 and an even more profound increase in HPV16-E7 expressing cells. In addition, we could show that ATP5B levels were unchanged in betaHPV positive skin cancers. However, comparing HPV-positive and HPV-negative oropharyngeal squamous cell carcinomas (OPSCC) we noticed that, while ATP5B expression levels did not correlate with patient overall survival in HPV-negative OPSCC, there was a strong correlation within the HPV16-positive OPSCC patient group. These novel findings provide evidence that HPV targets the host cell energy metabolism important for viral life cycle and HPV-mediated tumorigenesis.
- Published
- 2020
29. Mitochondrial respiration controls neoangiogenesis during wound healing and tumour growth
- Author
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Axel Witt, Sebastian Willenborg, Oliver Coutelle, Manolis Pasparakis, Carlos T. Moraes, Martin Krönke, Saskia Diana Günther, C. Lucas, Marie-Christine Albert, Sabine A. Eming, Susanne Brodesser, Lars Schiffmann, Jens M. Seeger, Christiane J. Bruns, F. Heintges-Kleinhofer, Fabian Schorn, Hamid Kashkar, Christian Jüngst, J. P. Werthenbach, and Melanie Fritsch
- Subjects
0301 basic medicine ,Male ,Bioenergetics ,Angiogenesis ,General Physics and Astronomy ,Oxidative Phosphorylation ,Gene Knockout Techniques ,Mice ,0302 clinical medicine ,Adenosine Triphosphate ,Neoplasms ,lcsh:Science ,Multidisciplinary ,Neovascularization, Pathologic ,Cell biology ,Mitochondria ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Female ,Endothelium ,Cellular respiration ,Transgene ,Science ,Cell Respiration ,Embryonic Development ,Neovascularization, Physiologic ,Mice, Transgenic ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,03 medical and health sciences ,Cell Line, Tumor ,medicine ,Cytochrome c oxidase ,Animals ,Humans ,Wound Healing ,Alkyl and Aryl Transferases ,Endothelial Cells ,Membrane Proteins ,General Chemistry ,Energy metabolism ,Embryo, Mammalian ,Disease Models, Animal ,030104 developmental biology ,Cell culture ,biology.protein ,lcsh:Q ,Endothelium, Vascular ,Wound healing ,Tumour angiogenesis - Abstract
The vasculature represents a highly plastic compartment, capable of switching from a quiescent to an active proliferative state during angiogenesis. Metabolic reprogramming in endothelial cells (ECs) thereby is crucial to cover the increasing cellular energy demand under growth conditions. Here we assess the impact of mitochondrial bioenergetics on neovascularisation, by deleting cox10 gene encoding an assembly factor of cytochrome c oxidase (COX) specifically in mouse ECs, providing a model for vasculature-restricted respiratory deficiency. We show that EC-specific cox10 ablation results in deficient vascular development causing embryonic lethality. In adult mice induction of EC-specific cox10 gene deletion produces no overt phenotype. However, the angiogenic capacity of COX-deficient ECs is severely compromised under energetically demanding conditions, as revealed by significantly delayed wound-healing and impaired tumour growth. We provide genetic evidence for a requirement of mitochondrial respiration in vascular endothelial cells for neoangiogenesis during development, tissue repair and cancer., During angiogenesis the vasculature switches from a quiescent to a proliferative state. Here the authors show that mitochondrial respiration in endothelial cells controls angiogenesis during development, tumour growth and tissue repair.
- Published
- 2020
30. First Report of
- Author
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A, Larach, N, Riquelme, A, Salinas, P E, Rolshausen, M, Seeger, and X, Besoian
- Published
- 2021
31. The Cost of Observation for Intrusion Detection: Performance Impact of Concurrent Host Observation.
- Author
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Mark M. Seeger, Stephen D. Wolthusen, Christoph Busch 0001, and Harald Baier
- Published
- 2010
32. Metabolic control of adult neural stem cell self-renewal by the mitochondrial protease YME1L
- Author
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Milica Jevtic, Désirée Schatton, S. M. V. Kochan, S. Chandragiri, Elisa Motori, Hans-Georg Sprenger, Elena I. Rugarli, K. Ndoci, Patrick Giavalisco, Thomas Langer, S. Mueller, Vignesh Sakthivelu, G. Wani, J. M. Seeger, R. J. Acton, and Matteo Bergami
- Subjects
Citric acid cycle ,Protease ,medicine.medical_treatment ,Metabolic control analysis ,Proteome ,Neurogenesis ,medicine ,Biology ,Progenitor cell ,Beta oxidation ,Neural stem cell ,Cell biology - Abstract
The transition between quiescence and activation in neural stem and progenitor cells (NSPCs) is coupled to reversible changes in energy metabolism with key implications for life-long NSPC self-renewal and neurogenesis. How this metabolic plasticity is ensured between NSPC activity states is unclear. We found that a state-dependent rewiring of the mitochondrial proteome by the peptidase YME1L is required to preserve NSPC self-renewal in the adult brain. YME1L-mediated proteome rewiring regulates the rate of fatty acid oxidation (FAO) for replenishing Krebs cycle intermediates and dNTP precursors, which are required to sustain NSPC amplification. Yme1l deletion irreversibly shifts the metabolic profile of NSPCs away from a FAO-dependent state resulting in defective self-renewal, premature differentiation and NSPC pool depletion. Our results disclose an important role for YME1L in coordinating the switch between metabolic states of NSPCs and suggest that NSPC fate is regulated by compartmentalized changes in protein network dynamics.
- Published
- 2021
33. The anti-apoptotic Bcl-2 protein regulates hair follicle stem cell function
- Author
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Catherin Niemann, Florian Kuester, Peter Schettina, Giada Mantellato, Hamid Kashkar, Anna Geueke, Melanie Nelles, and Jens M. Seeger
- Subjects
medicine.disease_cause ,Biochemistry ,Article ,Mice ,Downregulation and upregulation ,Conditional gene knockout ,Genetics ,medicine ,Animals ,Lef1 ,Molecular Biology ,Tissue homeostasis ,Skin ,Cancer ,hair follicle ,Chemistry ,Regeneration (biology) ,Stem Cells ,Bcl‐2 ,Stem Cells & Regenerative Medicine ,apoptosis ,Articles ,Hair follicle ,Cell biology ,stem cell ,medicine.anatomical_structure ,Apoptosis ,Autophagy & Cell Death ,Stem cell ,Carcinogenesis ,Apoptosis Regulatory Proteins - Abstract
Maintaining the architecture, size and composition of an intact stem cell (SC) compartment is crucial for tissue homeostasis and regeneration throughout life. In mammalian skin, elevated expression of the anti‐apoptotic Bcl‐2 protein has been reported in hair follicle (HF) bulge SCs (BSCs), but its impact on SC function is unknown. Here, we show that systemic exposure of mice to the Bcl‐2 antagonist ABT‐199/venetoclax leads to the selective loss of suprabasal BSCs (sbBSCs), thereby disrupting cyclic HF regeneration. RNAseq analysis shows that the pro‐apoptotic BH3‐only proteins BIM and Bmf are upregulated in sbBSCs, explaining their addiction to Bcl‐2 and the marked susceptibility to Bcl‐2 antagonism. In line with these observations, conditional knockout of Bcl‐2 in mouse epidermis elevates apoptosis in BSCs. In contrast, ectopic Bcl‐2 expression blocks apoptosis during HF regression, resulting in the accumulation of quiescent SCs and delaying HF growth in mice. Strikingly, Bcl‐2‐induced changes in size and composition of the HF bulge accelerate tumour formation. Our study identifies a niche‐instructive mechanism of Bcl‐2‐regulated apoptosis response that is required for SC homeostasis and tissue regeneration, and may suppress carcinogenesis., Anti‐apoptotic Bcl‐2 protein function is required to maintain a hair follicle subpopulation of stem cells in murine skin. Blocking cell death by Bcl‐2 overexpression affects the hair follicle stem cell niche and hair follicle regeneration.
- Published
- 2021
34. Respiratory chain inactivation links cartilage-mediated growth retardation to mitochondrial diseases
- Author
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Juliane Heilig, Julian Nüchel, Bent Brachvogel, Anja Niehoff, Björn Bluhm, Olivier R. Baris, Markus Auler, Veronika S. Georgieva, Markus Plomann, Jens M. Seeger, Julia Etich, Hamid Kashkar, Christian Frie, Kristina Probst, Tatjana Holzer, and Rudolf J. Wiesner
- Subjects
Mitochondrial Diseases ,Cellular differentiation ,Respiratory chain ,Cartilage metabolism ,Mitochondrion ,Biology ,Short stature ,Article ,Electron Transport ,Mitochondrial Proteins ,Mice ,03 medical and health sciences ,Chondrocytes ,0302 clinical medicine ,medicine ,Animals ,Growth Plate ,Collagen Type II ,Research Articles ,Growth Disorders ,030304 developmental biology ,Mice, Knockout ,0303 health sciences ,Cartilage ,DNA Helicases ,Cell Differentiation ,Cell Biology ,Cell biology ,Mice, Inbred C57BL ,Mitochondrial respiratory chain ,medicine.anatomical_structure ,Electron Transport Chain Complex Proteins ,Anaerobic glycolysis ,medicine.symptom ,Energy Metabolism ,030217 neurology & neurosurgery ,Signal Transduction - Abstract
Children with mitochondrial diseases often present with slow growth and short stature, but the underlying mechanism remains unclear. In this study, Holzer et al. provide in vivo evidence that mitochondrial respiratory chain dysfunction induces cartilage degeneration coincident with altered metabolism, impaired extracellular matrix formation, and cell death at the cartilage–bone junction., In childhood, skeletal growth is driven by transient expansion of cartilage in the growth plate. The common belief is that energy production in this hypoxic tissue mainly relies on anaerobic glycolysis and not on mitochondrial respiratory chain (RC) activity. However, children with mitochondrial diseases causing RC dysfunction often present with short stature, which indicates that RC activity may be essential for cartilage-mediated skeletal growth. To elucidate the role of the mitochondrial RC in cartilage growth and pathology, we generated mice with impaired RC function in cartilage. These mice develop normally until birth, but their later growth is retarded. A detailed molecular analysis revealed that metabolic signaling and extracellular matrix formation is disturbed and induces cell death at the cartilage–bone junction to cause a chondrodysplasia-like phenotype. Hence, the results demonstrate the overall importance of the metabolic switch from fetal glycolysis to postnatal RC activation in growth plate cartilage and explain why RC dysfunction can cause short stature in children with mitochondrial diseases.
- Published
- 2019
35. First Report of Diaporthe ambigua Associated with Dead Arm Disease on Grapevine in Chile
- Author
-
A. Larach, N. Riquelme, A. Salinas, P. E. Rolshausen, M. Seeger, and X. Besoian
- Subjects
Plant Science ,Agronomy and Crop Science - Published
- 2022
36. First Report of Bacterial Speck Caused by Pseudomonas syringae pv. tomato Race 1 Affecting Tomato in Different Regions of Chile
- Author
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M. Valenzuela, B. Fuentes, J. F. Alfaro, E. Gálvez, A. Salinas, X. Besoain, and M. Seeger
- Subjects
fungi ,food and beverages ,Plant Science ,Agronomy and Crop Science - Published
- 2022
37. Complementary and alternative medicine
- Author
-
Renee A. Bellanger and Christina M. Seeger
- Subjects
Complete data ,medicine.medical_specialty ,Distrust ,business.industry ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,media_common.quotation_subject ,Alternative medicine ,Patient care ,Medicine ,Risks and benefits ,business ,Adverse effect ,Intensive care medicine ,Healthcare providers ,media_common - Abstract
The use of complementary and alternative medicine (CAM) therapies continues to rise worldwide. The cultural importance of various CAM techniques and systems cannot be overlooked. As data become available on the use and adverse events, misuse, adulterations, toxicities and interactions of various dietary supplements (DS) and other CAM therapies, the clinician can piece together appropriate patient care approaches. Reporting mechanisms in many countries continue to be sporadic and inconsistent. Information may be biased or inaccurate in the public domain, causing consumer distrust of healthcare provider guidance. As with any therapeutic decision-making, the patient/consumer should be included in the process and given evidence-based information to weigh the risks and benefits for the individual's needs. Healthcare providers should familiarize themselves with CAM practices and the benefits and associated risks to best care for their patient populations. In this review of the current literature from January through December 2019, the adverse effects of herbal dietary supplements (HDS) are organized as affecting different physiological systems. Systematic reporting and monitoring of AEs from mind/body therapies are extremely limited though reported as found. The full impact caused by side effects (SE) of various CAM therapies may be underappreciated due to this lack of complete data.
- Published
- 2021
38. Sleep-related eating disorder associated with zolpidem: cases compiled from a literature review
- Author
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Itzayana Sanchez, Tiffany Ho, Merlyn Joseph, Alyssa Jimenez, and Christina M. Seeger
- Subjects
Pediatrics ,medicine.medical_specialty ,Zolpidem ,Parasomnias ,lcsh:Specialties of internal medicine ,Amnesia ,Review Article ,lcsh:RC581-951 ,medicine ,Sleep Related Eating Disorder ,Depression (differential diagnoses) ,business.industry ,musculoskeletal, neural, and ocular physiology ,General Medicine ,Sleep disorders ,medicine.disease ,Sleep-related eating disorder ,Dyssomnias ,Discontinuation ,Obstructive sleep apnea ,Eating disorders ,medicine.symptom ,business ,psychological phenomena and processes ,medicine.drug ,SRED - Abstract
Objective Zolpidem is associated with sleep-related eating disorder (SRED). We compiled case reports and performed a descriptive study to identify etiology and aggravating factors. Methods A literature search on PubMed's MeSH search feature, CINAHL, and SciFinder was performed using search terms “Zolpidem,” “Feeding and Eating Disorders/chemically induced,” “Dyssomnias,” “sleep eating disorder,” and “sleep-related eating disorder.” Three reviewers examined all English and Spanish citations and extracted pertinent information. A narrative synthesis of the evidence was prepared. Results We identified 40 case reports of which 65% were female, and the mean age was 53 years. SRED onset was most commonly seen with daily zolpidem doses of 10 mg or higher (95% of patients). Prior medical history included obstructive sleep apnea (OSA) (35%), depression (32.5%), and restless leg syndrome (RLS) (25%). Even with controlled RLS and OSA, SRED developed in some patients. All patients had either partial or full amnesia with compulsive eating. Onset of SRED occurred as early as the first dose to after 9 years of use. SRED symptoms occurred nightly in 57.5% of patients. Discontinuation of zolpidem resolved SRED in all patients (n = 36). Conclusion SRED associated with zolpidem can occur with any dose, but was most common with higher doses of zolpidem. Therefore, prescribers should initiate lower doses of zolpidem. Interestingly, many patients had underlying disorders known to affect sleep (RLS, OSA, depression). Although it is recommended to control these underlying disorders prior to initiating zolpidem, SRED may still occur. Zolpidem discontinuation resolved all cases of SRED., Graphical abstract Image 1, Highlights • Sleep-Related Eating Disorder (SRED) can occur with any dose of zolpidem. • Patients most vulnerable include females receiving higher doses of zolpidem. • SRED is more common with underlying disorders known to affect sleep. • Discontinuation of zolpidem resolves SRED.
- Published
- 2020
39. When poultry take a sick leave: Response costs for the 2014–2015 highly pathogenic avian influenza epidemic in the USA
- Author
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Riley M. Seeger, Kamina K. Johnson, Thomas L. Marsh, Amy D. Hagerman, and Dustin L. Pendell
- Subjects
Marginal cost ,0303 health sciences ,Economics and Econometrics ,Government ,Resource (biology) ,Sociology and Political Science ,030309 nutrition & dietetics ,business.industry ,Natural resource economics ,Impact assessment ,05 social sciences ,Management, Monitoring, Policy and Law ,Development ,medicine.disease_cause ,Influenza A virus subtype H5N1 ,03 medical and health sciences ,Agriculture ,0502 economics and business ,Sick leave ,medicine ,050202 agricultural economics & policy ,Business ,health care economics and organizations ,Food Science ,Cost database - Abstract
The 2014–2015 H5N2/H5N8 highly pathogenic avian influenza (HPAI) epidemic required $879 million dollars in public expenditures to eradicate the disease from poultry production, making it the most costly animal health incident in US history. Cost and resource availability are important considerations when determining optimal response plans. However, limited information was available, historically, on which to base the evaluation of response plans for large-scale HPAI events on farms in the US and across the world. Response cost data collected during the 2014–2015 HPAI outbreak by the United States Department of Agriculture – Animal and Plant Health Inspection Service and associated response information such as responder type and activity were examined as a preliminary effort to enhance understanding of the cost associated with alternative response plans under real resource and labor constraints. Results indicated that differences did exist by state and poultry facility type that affected both total and incremental cost, indicating the importance of local and state policies and resources on farm level eradication cost. On-farm response activities associated with depopulation and disposal resulted in costs that were most sensitive to bird inventory size. Exploring the responder characteristics revealed that contractors hired directly by the federal government or sub-contractors that are hired by a producer, while most expensive in absolute terms, contributed the lowest incremental increase in cost for each additional bird housed on a farm when depopulating. Identifying and quantifying response activity costs for poultry assists planning efforts for local, state and federal response agencies and private firms that are faced with high consequence avian health threats. The data, while still limited in certain facets, facilitate impact assessments and cost-benefit analyses in future planning. This study illustrates the importance of collecting livestock disease outbreak cost data ex post for observing cost relationships during large-scale animal disease events in countries with commercial poultry production.
- Published
- 2021
40. When constants are no longer constant: The case of inhibition in bioprocesses
- Author
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M. Seeger, Andres Donoso-Bravo, C. Segura, David Jeison, and Christian Vergara
- Subjects
0106 biological sciences ,education.field_of_study ,Environmental Engineering ,Chemistry ,Population ,Biomedical Engineering ,Bioengineering ,Model parameters ,01 natural sciences ,Ammonia nitrogen ,010101 applied mathematics ,Biochemistry ,010608 biotechnology ,0101 mathematics ,Biological system ,education ,Constant (mathematics) ,Biotechnology - Abstract
Traditional models describing microorganisms growth assume that changes in the environmental conditions generate immediate responses in microbial population. However, reports are available indicating that in some cases this may not be the case. The existence of a delayed inhibition response (DIR) was studied, exposing a microalgae culture to inhibitory ammonia concentrations. Results revealed the existence of considerable delays in the microalgae response, even when imposing conditions promoting null microalgal activity. Even an extremely unfavourable condition such as 1500 mg L −1 of total ammonia nitrogen and pH 9 takes about 24 h to induce complete inhibition. The existence of DIR may cause serious deviations between predictions given by traditional models and real behaviour of a culture. Inclusion of DIR in traditional models may be accomplished by assuming model parameters as variables depending on time. In other words, assuming that inhibition “constant” is no longer constant, but a function of exposure time.
- Published
- 2017
41. Safety of complementary and alternative medicine treatments and practices
- Author
-
Renee A. Bellanger, Helen E. Smith, and Christina M. Seeger
- Subjects
medicine.medical_specialty ,Modalities ,business.industry ,media_common.quotation_subject ,Alternative medicine ,Heavy metals ,Harm ,medicine ,Quality (business) ,Adverse effect ,Intensive care medicine ,business ,Healthcare providers ,media_common - Abstract
Complementary and alternative (CAM) treatment systems are being studied more intensely in recent years. Adverse events (AEs), errors, toxicities and interactions have reporting mechanisms in many countries but continue to be inconsistent in aggregation and causality assessment. The information available regarding dietary supplements (DS) and other CAM modalities with a prejudice toward “safe and natural” can deceive the consumer. DS are pharmacologically active moieties that act differently depending on the individual's state of being. Contamination of DS with heavy metals, unlabeled medications or other plant or animal products continues to plague the industry but newer methods of detection are being developed and used to assure quality of manufacturing. Manipulative and mind–body therapies are also undergoing scrutiny for appropriateness and efficacy without harm. Healthcare providers should familiarize themselves with CAM practices and their benefits and the associated risks to best care for their patient populations. In this review of the current literature from January through December 2018, the adverse effects of herbal dietary supplements (HDS) are organized as affecting different physiological systems. Many examples of unintentional and intentional contamination of HDS and methods of detection were recorded. The AEs reported for mind–body therapies were fewer in number and severity as compared to HDS, but without systematic reporting and monitoring it can be difficult to grasp the full extent of the impact side effects (SE) of various CAM therapies can have.
- Published
- 2019
42. Scaffolding in the Spliceosome via Single α Helices
- Author
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Alexander K.C. Ulrich, N Bartlick, M Seeger, Tonio Schütze, and Markus C. Wahl
- Subjects
Models, Molecular ,0301 basic medicine ,Spliceosome ,Scaffold ,Protein domain ,Crystal structure ,Biology ,Crystallography, X-Ray ,Protein Structure, Secondary ,03 medical and health sciences ,Contractile Proteins ,0302 clinical medicine ,Structural Biology ,Humans ,Molecular Biology ,Extracellular Matrix Proteins ,Binding Sites ,Circular Dichroism ,Ribonucleoproteins, Small Nuclear ,Unstructured Proteins ,Crystallography ,030104 developmental biology ,α helices ,RNA splicing ,Spliceosomes ,Pre-mRNA splicing ,Biophysics ,Thermodynamics ,RNA Splicing Factors ,030217 neurology & neurosurgery ,Protein Binding - Abstract
The spliceosomal B complex-specific protein Prp38 forms a complex with the intrinsically unstructured proteins MFAP1 and Snu23. Our binding and crystal structure analyses show that MFAP1 and Snu23 contact Prp38 via ER/K motif-stabilized single α helices, which have previously been recognized only as rigid connectors or force springs between protein domains. A variant of the Prp38-binding single α helix of MFAP1, in which ER/K motifs not involved in Prp38 binding were mutated, was less α-helical in isolation and showed a reduced Prp38 affinity, with opposing tendencies in interaction enthalpy and entropy. Our results indicate that the strengths of single α helix-based interactions can be tuned by the degree of helix stabilization in the unbound state. MFAP1, Snu23, and several other spliceosomal proteins contain multiple regions that likely form single α helices via which they might tether several binding partners and act as intermittent scaffolds that facilitate remodeling steps during assembly of an active spliceosome.
- Published
- 2016
43. Removal of pathogen indicators from secondary effluent using slow sand filtration: Optimization approaches
- Author
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Matthias Kästner, Nils Reiche, Eva M. Seeger, Mareike Braeckevelt, and Jochen A. Müller
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Environmental Engineering ,0208 environmental biotechnology ,Environmental engineering ,02 engineering and technology ,010501 environmental sciences ,Management, Monitoring, Policy and Law ,Clostridium perfringens ,Biology ,Schmutzdecke ,medicine.disease_cause ,Pulp and paper industry ,biology.organism_classification ,01 natural sciences ,Slow sand filter ,020801 environmental engineering ,Spore ,R2a agar ,chemistry.chemical_compound ,chemistry ,Wastewater ,medicine ,Coliphage ,Effluent ,0105 earth and related environmental sciences ,Nature and Landscape Conservation - Abstract
In many arid regions, the reuse of wastewater is an economic option for crop irrigation. To avoid health risks for consumers, pathogens must be eliminated prior to application. Slow sand filtration (SSF) represents an effective low-tech treatment technology for pathogen removal from water. To further improve the time-space yield of SSF, innovative filter configurations were investigated regarding the removal of the pathogen indicators Escherichia coli , enterococci, Clostridium perfringens spores, somatic and F-specific RNA coliphages as well as heterotrophic bacteria. A standard filter ( N ), a recirculating filter ( R ), a static cascade ( N + N ) and a rotating cascade ( C ) were tested at high and low hydraulic loading rates, two recirculation rates and two rotation frequencies. Results showed that only C and N + N concurrently complied with European standards for E. coli and enterococci, achieving mean log removal of 2.7-4.7 and 2.1-2.4, respectively. The best performance was reached by C with weekly rotation; N + N may be a promising, technically simpler alternative. The crucial role of biological removal mechanisms for E. coli and enterococci elimination was indicated by (i) the increased efficiency of the standard SSF N after 1½ years of operation and (ii) the positive impact of several Schmutzdecke layers. C. perfringens spore removal performance was good for all SSFs. Considerable sorption of spores was indicated by decreased efficiency in N and C at long operation times. Somatic coliphages were reduced to concentrations close to the detection limit, while F-specific RNA coliphage removal was ∼1.1 log. Removal of heterotrophic bacteria was generally limited.
- Published
- 2016
44. THU0603 IGG4-RELATED SINGLE-ORGAN DISEASE: IMMUNOSUPPRESSION NEEDED AFTER COMPLETE RESECTION? A CASE REPORT AN BRIEF LITERATURE REVIEW
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Matthias Laudes, Dominik M. Schulte, Bimba F. Hoyer, Stefan Schreiber, Jan H. Schirmer, and M. Seeger
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medicine.medical_specialty ,business.industry ,medicine.medical_treatment ,Standard treatment ,Immunology ,Thyroidectomy ,Immunosuppression ,medicine.disease ,Asymptomatic ,Dermatology ,General Biochemistry, Genetics and Molecular Biology ,Thyroiditis ,Rheumatology ,Cholecystitis ,medicine ,Immunology and Allergy ,Eosinophilia ,medicine.symptom ,business ,Watchful waiting - Abstract
Background:IgG4-related disease (IgG4-RD) is a polymorphic autoimmune disease leading to tumourous swelling and/or fibrosis of affected organs. Riedel’s thyroiditis is – besides chronic periaortitis, Mikulicz Syndrome and many others – an organ manifestation of IgG4-RD that has been thought to be an independent disease for a long time. About 40% of patients have single organ IgG4-RD while the others suffer from multisystemic disease [1].Objectives:Glucocorticoids, sometimes combined with other immunosuppressives are the standard treatment of IgG4-RD, in some situations (e.g. mechanical complications or suspected malignancy) surgery may be necessary but little is known about the management of fully resected single-organ IgG4-RD [1].Methods:We report a case of single-organ IgG4-RD (Riedel’s thyroiditis) after complete resection and perform a brief review of the literature to guide clinical management in this situation.Results:A woman (51 y) with pre-existing Hashimoto’s thyroiditis (thyroid peroxidase antibody positive) developed a rapidly growing struma with very firm consistency (not allowing fine needle biopsy). Besides slightly increased C-reactive protein (5,3 mg/l) there was no laboratory sign suggestive for IgG4-RD (normal serum IgG4, complement, eosinophils and IgE). Within 4 months the patient suffered from hoarseness and progredient dyspnea. Surgical thyroidectomy was performed and histopathology revealed IgG4-related Riedel’s thyroiditis with extensive (storiform) fibrosis, a dense lymphoplasmacytic infiltrate, obliterative phlebitis, eosinophilia and 13 IgG4-positive plasma cells per high power field.After referral to our department a comprehensive work-up showed no signs of other manifestations of IgG4-RD. Treatment with glucocorticoids is clearly recommended for patients with symptomatic IgG4-RD in an international consensus statement, whereas “watchful waiting” may be appropriate in some cases of asymptomatic or mild disease. While some highly fibrotic lesions may not respond well to glucocorticoids and may require surgical intervention, no clear guidance is available for the management of fully resected single organ IgG4-RD [2].A brief review of the literature revealed that few cases of single-organ IgG4-RD remaining in remission after resection without medical treatment have been reported e.g. IgG4-related cholecystitis, autoimmune-pancreatitis, tumours of the intestinal tract, lung, thymus, meninges, paravertebral space and others [3–9].After discussion of the options with the patient no systemic immunosuppression was given under close follow up without signs of relapse in clinical examinations, laboratory or imaging during the first 6 months.Conclusion:Limited evidence from case reports suggests that a “watchful waiting” strategy without systemic immunosuppressive treatment may be reasonable in some cases of single-organ IgG4-RD after the affected organ was completely resected (e.g. due to mechanical complications or suspected malignoma). However, close follow-up monitoring should be applied due to the risk of relapse or development of new organ manifestations.References:[1]Brito-Zerón et al.Best Pract. Res. Clin. Rheumatol.2016[2]Khosroshahi et al.Arthritis Rheumatol.2015[3]Takahashi et al.Surg. Case Rep.2015[4]Akbari et al.ACG Case Rep. J.2018[5]Oda et al.Thorac. Cancer2019[6]Nambirajan et al.Childs Nerv. Syst. ChNS Off. J. Int. Soc. Pediatr. Neurosurg.2019[7]Uchida et al.Asian J. Endosc. Surg.2018[8]Hart et al.Mod. Pathol. Off. J. U. S. Can. Acad. Pathol. Inc2015[9]Kim et al.Tuberc. Respir. Dis.2014Disclosure of Interests:Jan Schirmer: None declared, Marcus Seeger: None declared, Dominik Schulte Paid instructor for: Ferring, Speakers bureau: Amgen, Astra Zeneca, Braun, Fresenius, Ipsen, Johnson & Johnson, Lilly, MSD, Novartis, Novo Nordisk, Sanofi, Matthias Laudes Speakers bureau: Roche, Sanofi, Chugai, Stefan Schreiber Consultant of: AbbVie, Arena, BMS, Biogen, Celltrion, Celgene, IMAB, Gilead, MSD, Mylan, Pfizer, Fresenius, Janssen, Takeda, Theravance, provention Bio, Protagonist and Falk, Bimba F. Hoyer: None declared
- Published
- 2020
45. BAX/BAK-Induced Apoptosis Results in Caspase-8-Dependent IL-1β Maturation in Macrophages
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Veit Hornung, Rolf Müller, Petr Broz, Roland Beckmann, Eva Bartok, Jennifer Herrmann, Jens M. Seeger, Stephen W.G. Tait, Hamid Kashkar, Florian J. Bock, Moritz M. Gaidt, Dhruv Chauhan, and HIPS, Helmholtz-Institut für Pharmazeutische Forschung Saarland, Universitätscampus E8.1 66123 Saarbrücken, Germany.
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0301 basic medicine ,BCL2 ,Cell Survival ,medicine.medical_treatment ,Interleukin-1beta ,Ripoptosome ,Apoptosis ,Caspase 8 ,Peptides, Cyclic ,General Biochemistry, Genetics and Molecular Biology ,Permeability ,caspase-8 ,03 medical and health sciences ,Mice ,intrinsic apoptosis ,NLRP3 ,NLR Family, Pyrin Domain-Containing 3 Protein ,medicine ,Animals ,Humans ,bcl-2-Associated X Protein ,Protein Synthesis Inhibitors ,L-Lactate Dehydrogenase ,Chemistry ,Macrophages ,Intrinsic apoptosis ,Caspase 1 ,Interleukin ,Biological activity ,Inflammasome ,BAX/BAK ,Cell biology ,Enzyme Activation ,IAP depletion ,IL-1β ,MCL-1 ,ripoptosome ,030104 developmental biology ,Cytokine ,bcl-2 Homologous Antagonist-Killer Protein ,Mitochondrial Membranes ,medicine.drug - Abstract
IL-1β is a cytokine of pivotal importance to the orchestration of inflammatory responses. Synthesized as an inactive pro-cytokine, IL-1β requires proteolytic maturation to gain biological activity. Here, we identify intrinsic apoptosis as a non-canonical trigger of IL-1β maturation. Guided by the discovery of the immunomodulatory activity of vioprolides, cyclic peptides isolated from myxobacteria, we observe IL-1β maturation independent of canonical inflammasome pathways, yet dependent on intrinsic apoptosis. Mechanistically, vioprolides inhibit MCL-1 and BCL2, which in turn triggers BAX/BAK-dependent mitochondrial outer membrane permeabilization (MOMP). Induction of MOMP results in the release of pro-apoptotic factors initiating intrinsic apoptosis, as well as the depletion of IAPs (inhibitors of apoptosis proteins). IAP depletion, in turn, operates upstream of ripoptosome complex formation, subsequently resulting in caspase-8-dependent IL-1β maturation. These results establish the ripoptosome/caspase-8 complex as a pro-inflammatory checkpoint that senses the perturbation of mitochondrial integrity.
- Published
- 2018
46. Cytosolic Gram-negative bacteria prevent apoptosis by inhibition of effector caspases through lipopolysaccharide
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Paul G. Higgins, Veit Hornung, Maria L. Bernardini, Jens M. Seeger, Stefan Höning, Lars Schiffmann, Thomas A. Kufer, Guy S. Salvesen, Maria Coutelle, Saskia Diana Günther, Hamid Kashkar, Melanie Fritsch, Scott J. Snipas, and Martin Krönke
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Microbiology (medical) ,Lipopolysaccharides ,Male ,Programmed cell death ,Lipopolysaccharide ,Immunology ,Apoptosis ,Applied Microbiology and Biotechnology ,Microbiology ,Shigella flexneri ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,Cytosol ,Gram-Negative Bacteria ,Genetics ,Animals ,Humans ,bacteria ,apoptosis ,lipopolysaccharide ,Shigella ,Caspase ,030304 developmental biology ,0303 health sciences ,biology ,Virulence ,030306 microbiology ,Effector ,Intracellular parasite ,Caspases, Effector ,O Antigens ,Cell Biology ,biology.organism_classification ,Caspase Inhibitors ,Cell biology ,Mice, Inbred C57BL ,chemistry ,biology.protein ,Female ,Intracellular ,HeLa Cells - Abstract
The cytosolic appearance and propagation of bacteria cause overwhelming cellular stress responses that induce apoptosis under normal conditions. Therefore, successful bacterial colonization depends on the ability of intracellular pathogens to block apoptosis and to safeguard bacterial replicative niches. Here, we show that the cytosolic Gram-negative bacterium Shigella flexneri stalls apoptosis by inhibiting effector caspase activity. Our data identified lipopolysaccharide (LPS) as a bona fide effector caspase inhibitor that directly binds caspases by involving its O-antigen (O Ag) moiety. Bacterial strains that lacked the O Ag or failed to replicate within the cytosol were incapable of blocking apoptosis and exhibited reduced virulence in a murine model of bacterial infection. Our findings demonstrate how Shigella inhibits pro-apoptotic caspase activity, effectively delays coordinated host-cell demise and supports its intracellular propagation. Next to the recently discovered pro-inflammatory role of cytosolic LPS, our data reveal a distinct mode of LPS action that, through the disruption of the early coordinated non-lytic cell death response, ultimately supports the inflammatory breakdown of infected cells at later time points. The lipopolysaccharide of the intracellular pathogen Shigella, in particular its O antigen, interacts with caspases and blocks their activation to prevent apoptosis.
- Published
- 2018
47. Tumour-infiltrating neutrophils counteract anti-VEGF therapy in metastatic colorectal cancer
- Author
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Hakan Alakus, Florian Gebauer, Georg Dieplinger, Lars Schiffmann, Marc Bludau, Hamid Kashkar, Frank Hilberg, Alexander Quaas, Oliver Coutelle, Christiane J. Bruns, Jens M. Seeger, Heike Göbel, Fabinshy Thangarajah, Saskia Diana Günther, Neil Richard Stair, Thomas Zander, and Melanie Fritsch
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Male ,Vascular Endothelial Growth Factor A ,Cancer Research ,Isoantigens ,Bevacizumab ,Colorectal cancer ,Neutrophils ,medicine.medical_treatment ,Vesicular Transport Proteins ,Angiogenesis Inhibitors ,Receptors, Cell Surface ,Antibodies, Monoclonal, Humanized ,GPI-Linked Proteins ,Predictive markers ,Article ,Metastasis ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Immune infiltration ,medicine ,Biomarkers, Tumor ,Animals ,Humans ,Neoplasm Metastasis ,Aged ,Anti vegf ,Chemotherapy ,Neovascularization, Pathologic ,business.industry ,Middle Aged ,medicine.disease ,Xenograft Model Antitumor Assays ,Oncology ,Drug Resistance, Neoplasm ,030220 oncology & carcinogenesis ,Cancer research ,Neoplastic Stem Cells ,Immunohistochemistry ,Female ,business ,Colorectal Neoplasms ,Infiltration (medical) ,Tumour angiogenesis ,medicine.drug - Abstract
Background Immune infiltration is implicated in the development of acquired resistance to anti-angiogenic cancer therapy. We therefore investigated the correlation between neutrophil infiltration in metastasis of colorectal cancer (CRC) patients and survival after treatment with bevacizumab. Our study identifies CD177+ tumour neutrophil infiltration as an adverse prognostic factor for bevacizumab treatment. We further demonstrate that a novel anti-VEGF/anti-Ang2 compound (BI-880) can overcome resistance to VEGF inhibition in experimental tumour models. Methods A total of 85 metastatic CRC patients were stratified into cohorts that had either received chemotherapy alone (n = 39) or combined with bevacizumab (n = 46). Tumour CD177+ neutrophil infiltration was correlated to clinical outcome. The impact of neutrophil infiltration on anti-VEGF or anti-VEGF/anti-Ang2 therapy was studied in both xenograft and syngeneic tumour models by immunohistochemistry. Results The survival of bevacizumab-treated CRC patients in the presence of CD177+ infiltrates was significantly reduced compared to patients harbouring CD177− metastases. BI-880 treatment reduced the development of hypoxia associated with bevacizumab treatment and improved vascular normalisation in xenografts. Furthermore, neutrophil depletion or BI-880 treatment restored treatment sensitivity in a syngeneic tumour model of anti-VEGF resistance. Conclusions Our findings implicate CD177 as a biomarker for bevacizumab and suggest VEGF/Ang2 inhibition as a strategy to overcome neutrophil associated resistance to anti-angiogenic treatment.
- Published
- 2018
48. Safety of Complementary and Alternative Medicine (CAM) Treatments and Practices
- Author
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Renee A. Bellanger, Christina M. Seeger, and Helen E. Smith
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medicine.medical_specialty ,Traditional medicine ,business.industry ,Alternative medicine ,Monitoring system ,CINAHL ,030204 cardiovascular system & hematology ,Perceived health ,Patient population ,03 medical and health sciences ,0302 clinical medicine ,030220 oncology & carcinogenesis ,Pharmacovigilance ,medicine ,030211 gastroenterology & hepatology ,030212 general & internal medicine ,business ,Intensive care medicine ,Adverse effect ,Healthcare providers - Abstract
Use of complementary and alternative medicine (CAM) practices and treatments is increasing around the world due to perceived health benefits, low cost and relatively low risk. The current literature on the safety and reported adverse, and especially toxic, effects of CAM treatments and practices was reviewed. A literature search of PubMed, Google Scholar, NIH, CINAHL, Science Direct and WHO databases for meta-analyses, case studies, and case reports published in English in the year 2016 was conducted to obtain data on the safety of CAM therapies and any reported adverse effects or contaminants. In this review, adverse effects of herbal dietary supplements (HDS) are organized by the different physiological systems affected. As expected, hepatotoxicity was the most frequently associated adverse effect with the HDS since the vast majority are consumed orally. Many examples of unintentional and intentional contamination of HDS, the latter most prevalent with sexual and performance enhancing HDS, were recorded. The adverse effects reported for mind–body therapies were fewer in number and severity as compared to HDS. The increasing use of CAM therapies and instances of toxicity and other adverse effects underscore the need for a better reporting and monitoring system for CAM. Safety of CAM practices and treatments is not prospectively regulated. In many cases, there is a lack of information until complaints against a particular product or practice are brought to governmental authorities. Healthcare providers should familiarize themselves with CAM practices and their benefits and risks to best care for their patient population.
- Published
- 2018
49. 10 W CEP-stable few-cycle source at 2 µm with 100 kHz repetition rate
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Marcel Neuhaus, Michael K. Trubetskov, M. Seeger, Vladimir Pervak, Harald Fuest, Pawel Wnuk, Hans-Dieter Hoffmann, Zsuzsanna Major, Johannes Schötz, Eberhard Riedle, Matthias F. Kling, Peter Russbueldt, and Publica
- Subjects
Optical amplifier ,Materials science ,business.industry ,Phase (waves) ,02 engineering and technology ,021001 nanoscience & nanotechnology ,Laser ,01 natural sciences ,Atomic and Molecular Physics, and Optics ,law.invention ,Supercontinuum ,Power (physics) ,010309 optics ,Optics ,law ,Picosecond ,0103 physical sciences ,Parametric oscillator ,0210 nano-technology ,BIBO stability ,business - Abstract
We developed a high repetition rate optical parametric chirped-pulse amplification (OPCPA) laser system based on fiber-laser-seeded Innoslab to generate few-cycle pulses around 2 µm with passively stable carrier-envelope phase (CEP) by difference frequency generation (DFG). Incorporating a piezo mirror before the DFG stage permits rapid CEP control. The OPCPA system is seeded by a stable supercontinuum generated in bulk material with the picosecond Innoslab pulses. Few-cycle pulses with durations of 17 fs and energies of over 100 μJ were produced in a single OPCPA stage. Three different nonlinear crystals: BBO, BiBO, and LNB were tested in the final parametric amplifier, and their average power related limitations are addressed.
- Published
- 2018
50. Activation of KIT modulates the function of tumor necrosis factor-related apoptosis-inducing ligand receptor (TRAIL-R) in mast cells
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Stefan Grotha, Sébastien Letard, Anja Förster, Anja Rabenhorst, Manuela Gehring, Axel Roers, Ulrike Raap, Patrice Dubreuil, Henning Walczak, Jens M. Seeger, Karin Hartmann, and Hamid Kashkar
- Subjects
Cell Survival ,Immunology ,Apoptosis ,Cell Count ,Mice, Transgenic ,Stem cell factor ,Biology ,TNF-Related Apoptosis-Inducing Ligand ,Mice ,Bone Marrow ,In vivo ,medicine ,Animals ,Humans ,Immunology and Allergy ,Mast Cells ,Receptor ,Gene knockout ,Mice, Knockout ,Stem Cell Factor ,humanities ,In vitro ,Disease Models, Animal ,Proto-Oncogene Proteins c-kit ,Receptors, TNF-Related Apoptosis-Inducing Ligand ,medicine.anatomical_structure ,Gene Expression Regulation ,Mutation ,Cancer research ,Tumor necrosis factor alpha ,Bone marrow ,Mastocytosis - Abstract
Background Mastocytosis is characterized by the accumulation of mast cells (MCs) associated with activating mutations of KIT. Tumor necrosis factor-related apoptosis-inducing ligand receptors (TRAIL-Rs) are preferentially expressed on neoplastic cells and induce the extrinsic apoptotic pathway. Recent studies reported on the expression of TRAIL-Rs and TRAIL-induced apoptosis in cultured human MCs, which depend on stem cell factor (SCF)-induced or constitutive KIT activation. Material and methods We sought to further define the impact of TRAIL-Rs on MCs in vivo and in vitro. Using Cre/loxP recombination, we generated mice with MC-specific and ubiquitous knockout of TRAIL-R. In these mice, anaphylaxis and numbers of MCs were investigated. We also explored the expression and function of TRAIL-Rs in cultured murine and human MCs upon activation of KIT. By conducting immunofluorescence staining, we analyzed the expression of TRAIL-Rs in MCs infiltrating the bone marrow of patients with mastocytosis. Results MC-specific deletion of TRAIL-R was associated with a slight, but significant increase in anaphylaxis. Numbers of MCs in MC-specific knockouts of TRAIL-R were comparable to controls. Whereas cultured IL-3-dependent murine MCs from wild-type mice were resistant to TRAIL-induced apoptosis, SCF-stimulated MCs underwent apoptosis in response to TRAIL. Interestingly, activating KIT mutations also promoted sensitivity to TRAIL-mediated apoptosis in human MCs. In line with these findings, MCs infiltrating the bone marrow of patients with mastocytosis expressed TRAIL-R1. Conclusions Activation of KIT regulates the function of TRAIL-Rs in MCs. TRAIL-R1 may represent an attractive diagnostic and therapeutic target in diseases associated with KIT mutations, such as mastocytosis.
- Published
- 2015
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