592 results on '"M. HORNER"'
Search Results
2. RNA modification of an RNA modifier prevents self-RNA sensing.
- Author
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Daltry L Snider and Stacy M Horner
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Biology (General) ,QH301-705.5 - Abstract
A new study in PLOS Biology finds that interferon (IFN)-induced adenosine deaminase acting on RNA 1 (ADAR1) mRNA is N6-methyladenosine (m6A) modified to promote its translation, enabling ADAR1 to modify self-double-stranded RNAs (dsRNAs) generated during the IFN response and preventing activation of the melanoma differentiation-associated protein 5 (MDA5)-mediated host antiviral response.
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- 2021
- Full Text
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3. Bempedoic acid and cardiovascular outcomes in statin-intolerant patients
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SE, Nissen, primary, AM, Lincoff, additional, D, Brennan, additional, KK, Ray, additional, D, Mason, additional, JJP, Kastelein, additional, PD, Thompson, additional, P, Libby, additional, L, Cho, additional, J, Plutzky, additional, HE, Bays, additional, PM, Moriarty, additional, V, Menon, additional, DE, Grobbee, additional, MJ, Louie, additional, CF, Chen, additional, N, Li, additional, L, Bloedon, additional, P, Robinson, additional, M, Horner, additional, WJ, Sasiela, additional, J, McCluskey, additional, D, Davey, additional, P, Fajardo-Campos, additional, P, Petrovic, additional, J, Fedacko, additional, W, Zmuda, additional, Y, Lukyanov, additional, SJ, Nicholls, additional, and CLEAR, Outcomes Investigators Nicholls, additional
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- 2023
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4. The mRNA Cap 2′-O-Methyltransferase CMTR1 Regulates the Expression of Certain Interferon-Stimulated Genes
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Graham D. Williams, Nandan S. Gokhale, Daltry L. Snider, and Stacy M. Horner
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ISGs ,RNA modification ,antiviral ,interferon ,Microbiology ,QR1-502 - Abstract
ABSTRACT Type I interferons (IFN) initiate an antiviral state through a signal transduction cascade that leads to the induction of hundreds of IFN-stimulated genes (ISGs) to restrict viral infection. Recently, RNA modifications on both host and viral RNAs have been described as regulators of infection. However, the impact of host mRNA cap modifications on the IFN response and how this regulates viral infection are unknown. Here, we reveal that CMTR1, an ISG that catalyzes 2′-O-methylation of the first transcribed nucleotide in cellular mRNA (Cap 1), promotes the protein expression of specific ISGs that contribute to the antiviral response. Depletion of CMTR1 reduces the IFN-induced protein levels of ISG15, MX1, and IFITM1, without affecting their transcript abundance. However, CMTR1 depletion does not significantly affect the IFN-induced protein or transcript abundance of IFIT1 and IFIT3. Importantly, knockdown of IFIT1, which acts with IFIT3 to inhibit the translation of RNAs lacking Cap 1 2′-O-methylation, restores protein expression of ISG15, MX1, and IFITM1 in cells depleted of CMTR1. Finally, we found that CMTR1 plays a role in restricting RNA virus replication, likely by ensuring the expression of specific antiviral ISGs. Taken together, these data reveal that CMTR1 is required to establish an antiviral state by ensuring the protein expression of a subset of ISGs during the type I IFN response. IMPORTANCE Induction of an efficient type I IFN response is important to control viral infection. We show that the host 2′-O-methyltransferase CMTR1 facilitates the protein expression of ISGs in human cells by preventing IFIT1 from inhibiting the translation of those mRNAs lacking cap 2′-O-methylation. Thus, CMTR1 promotes the IFN-mediated antiviral response.
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- 2020
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5. Role of Interfacial Conditions on Blast Overpressure Propagation Into the Brain
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YungChia Chen, Thomas J. O'Shaughnessy, Gary H. Kamimori, David M. Horner, Michael J. Egnoto, and Amit Bagchi
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Cerebral spinal fluid ,overpressure propagation ,human surrogate ,interfacial conditions ,fluid-solid interaction ,surrogate brain ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
The complex interfacial condition between the human brain and the skull has been difficult to emulate in a surrogate system. Surrogate head models have typically been built using a homogeneous viscoelastic material to represent the brain, but the effect of different interfacial conditions between the brain and the skull on pressure transduction into the brain during blast has not been studied. In the present work, three interfacial conditions were generated in physical surrogate human head models. The first surrogate consisted of a gel brain separated from the skull by a layer of saline solution similar in thickness to the cerebrospinal fluid (CSF) layer in the human head: the fluid interface head model. The second surrogate head had the entire cranial cavity filled with the gel: the fixed interface head model. The third surrogate head contained a space-filling gel brain wrapped in a thin plastic film: the stick-slip interface head model. The human head surrogates were evaluated in a series of frontal blast tests to characterize the effect of skull-brain interfacial conditions on overpressure propagation into the gel brains. The fixed and the stick-slip interface head models showed nearly equal peak brain overpressures. In contrast, the fluid interface head model had much higher in-brain peak overpressures than the other two models, thus representing the largest transmission of forces into the gel brain. Given that the elevated peak overpressures occurred only in the fluid interface head model, the presence of the saline layer is likely responsible for this increase. This phenomenon is hypothesized to be attributed to the incompressibility of the saline and/or the impedance differences between the materials. The fixed interface head model showed pronounced high frequency energy content relative to the other two models, implying that the fluid and the stick-slip conditions provided better dampening. The cumulative impulse energy entering the three brain models were similar, suggesting that the interface conditions do not affect the total energy transmission over the positive phase duration of a blast event. This study shows that the fidelity of the surrogate human head models would improve with a CSF-emulating liquid layer.
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- 2020
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6. A potentially abundant junctional RNA motif stabilized by m6A and Mg2+
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Bei Liu, Dawn K. Merriman, Seung H. Choi, Maria A. Schumacher, Raphael Plangger, Christoph Kreutz, Stacy M. Horner, Kate D. Meyer, and Hashim M. Al-Hashimi
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Science - Abstract
N 6-Methyladenosine (m6A) is a post-transcriptional RNA modification that modulates RNA structure through a destabilization of m6A base pairing. Here the authors use NMR and UV melting experiments and show that m6A can also stabilize m6A–U base pairs and global RNA structure when positioned adjacent to a 5ʹ bulge.
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- 2018
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7. N6 -methyladenosine modification of hepatitis B virus RNA differentially regulates the viral life cycle
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Hasan Imam, Mohsin Khan, Nandan S. Gokhale, Alexa B. R. McIntyre, Geon-Woo Kim, Jae Young Jang, Seong-Jun Kim, Christopher E. Mason, Stacy M. Horner, and Aleem Siddiqui
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- 2018
- Full Text
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8. Penalties and payoffs: The <scp>short‐term</scp> economic consequences of human capital acquisition for resettled refugees in the United States
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Ryan Allen, Kimberly M. Horner, and Jung Ho Choi
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Demography - Published
- 2023
9. Structure-first identification of RNA elements that regulate dengue virus genome architecture and replication
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Mark A. Boerneke, Nandan S. Gokhale, Stacy M. Horner, and Kevin M. Weeks
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Multidisciplinary - Abstract
The genomes of RNA viruses encode the information required for replication in host cells both in their linear sequence and in complex higher-order structures. A subset of these RNA genome structures show clear sequence conservation, and have been extensively described for well-characterized viruses. However, the extent to which viral RNA genomes contain functional structural elements—unable to be detected by sequence alone—that nonetheless are critical to viral fitness is largely unknown. Here, we devise a structure-first experimental strategy and use it to identify 22 structure-similar motifs across the coding sequences of the RNA genomes for the four dengue virus serotypes. At least 10 of these motifs modulate viral fitness, revealing a significant unnoticed extent of RNA structure-mediated regulation within viral coding sequences. These viral RNA structures promote a compact global genome architecture, interact with proteins, and regulate the viral replication cycle. These motifs are also thus constrained at the levels of both RNA structure and protein sequence and are potential resistance-refractory targets for antivirals and live-attenuated vaccines. Structure-first identification of conserved RNA structure enables efficient discovery of pervasive RNA-mediated regulation in viral genomes and, likely, other cellular RNAs.
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- 2023
10. Fracture Process Zone Characterizations of Multi-Scale Fiber Reinforced Cementitious Composites
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Dylan A. Scott, Andrew M. Lessel, Brett A. Williams, William M. Horner, and Ravi Ranade
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- 2023
11. Structure-first identification of conserved RNA elements that regulate dengue virus genome architecture and replication
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Mark A. Boerneke, Nandan S. Gokhale, Stacy M. Horner, and Kevin M. Weeks
- Abstract
The genomes of RNA viruses encode the information required for replication in host cells in both their linear sequence and in complex higher-order structures. A subset of these complex functional RNA genome structures show clear sequence conservation. However, the extent to which viral RNA genomes contain conserved structural elements – that cannot be detected by sequence alone – that nonetheless are critical to viral fitness is largely unknown. Here, we take a structure-first approach to identify motifs conserved across the coding sequences of the RNA genomes for the four dengue virus (DENV) serotypes. We used SHAPE-MaP to identify 22 candidate motifs with conserved RNA structures, but no prior association with viral replication. At least ten of these motifs are important for viral fitness, revealing a significant unnoticed extent of RNA structure-mediated regulation within viral coding sequences. These conserved viral RNA structures promote a compact global genome architecture, interact with proteins, and regulate the viral replication cycle. These motifs are constrained at the levels of both RNA structure and protein sequence and are potential resistance-refractory targets for antivirals and live-attenuated vaccines. Structure-first identification of conserved RNA structure is poised to guide efficient discovery of RNA-mediated regulation in viral genomes and other cellular RNAs.
- Published
- 2022
12. Comparing Deliveries of Sterile Codling Moth (Lepidoptera: Tortricidae) by Two Types of Unmanned Aerial Systems and from the Ground
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Timothy F. Vandervoet, Peter L. Lo, Bruce H Abbott, Rachael M. Horner, D. J. Rogers, D. Maxwell Suckling, Anna Kokeny, and James T S Walker
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0106 biological sciences ,Tortricidae ,Mating disruption ,Codling moth ,Moths ,medicine.disease_cause ,Insect Control ,01 natural sciences ,Pheromones ,Toxicology ,Lepidoptera genitalia ,03 medical and health sciences ,Sterile insect technique ,Infestation ,medicine ,Animals ,Sex Attractants ,030304 developmental biology ,0303 health sciences ,Ecology ,biology ,fungi ,General Medicine ,biology.organism_classification ,Pheromone trap ,010602 entomology ,Malus ,Insect Science ,Orchard - Abstract
New Zealand apple exports must meet strict phytosanitary measures to eliminate codling moth (Cydia pomonella Linnaeus) (Lepidoptera: Tortricidae) larval infestation. This study was part of a program attempting the localized eradication of codling moth within an isolated cluster of seven orchards (391 ha). A conventional management program of insecticide sprays and pheromone mating disruption was supplemented with weekly releases of sterile moths for 1–6 yr. Our objective was to compare the recapture rate of sterile moths following their release by four methods, and the efficiency of each system. The methods were the following: a fixed-wing unmanned plane flying ~40–45 m high at 70 km/h, an unmanned hexacopter travelling 20 m high at 25 km/h, and manually from the ground via bicycles or motor vehicles. The different release methods were used in different years or weeks. Sterile male moths were recaptured in grids of pheromone traps positioned throughout each orchard. The highest recapture rate followed delivery by hexacopter, then bicycle, vehicle, and plane. There was a 17-fold difference in catches between releases by hexacopter and plane, and sixfold between vehicle and plane in the same season. Bicycle delivery had a 3.5-fold higher recapture rate than the plane in different years. The wind-borne horizontal drift of moths was investigated as a possible explanation for the disparity of recaptures between the two aircraft delivery systems. The methods in ascending order of time per hectare for delivery were the following: plane and vehicle, hexacopter, then bicycle. The advantages and disadvantages of each moth delivery method are discussed.
- Published
- 2021
13. Examining Cultural Structures and Functions in Biology
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Katherine C Crocker, Gail L. Rosen, Richelle L. Tanner, Neena Grover, Talia Y. Moore, Angela M. Horner, Michelle L. Anderson, Adam P. Summers, Loren E. Hough, Kaitlin Stack Whitney, and Shuchismita Dutta
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0301 basic medicine ,Equity (economics) ,Interpretation (philosophy) ,media_common.quotation_subject ,05 social sciences ,Indoctrination ,050301 education ,Plant Science ,Racism ,Gatekeeping ,03 medical and health sciences ,030104 developmental biology ,Harm ,Scale (social sciences) ,Animals ,Animal Science and Zoology ,Engineering ethics ,Profitability index ,Biology ,0503 education ,media_common - Abstract
Synopsis Scientific culture and structure organize biological sciences in many ways. We make choices concerning the systems and questions we study. Our research then amplifies these choices into factors that influence the directions of future research by shaping our hypotheses, data analyses, interpretation, publication venues, and dissemination via other methods. But our choices are shaped by more than objective curiosity—we are influenced by cultural paradigms reinforced by societal upbringing and scientific indoctrination during training. This extends to the systems and data that we consider to be ethically obtainable or available for study, and who is considered qualified to do research, ask questions, and communicate about research. It is also influenced by the profitability of concepts like open-access—a system designed to improve equity, but which enacts gatekeeping in unintended but foreseeable ways. Creating truly integrative biology programs will require more than intentionally developing departments or institutes that allow overlapping expertise in two or more subfields of biology. Interdisciplinary work requires the expertise of large and diverse teams of scientists working together—this is impossible without an authentic commitment to addressing, not denying, racism when practiced by individuals, institutions, and cultural aspects of academic science. We have identified starting points for remedying how our field has discouraged and caused harm, but we acknowledge there is a long path forward. This path must be paved with field-wide solutions and institutional buy-in: our solutions must match the scale of the problem. Together, we can integrate—not reintegrate—the nuances of biology into our field.
- Published
- 2021
14. RELAÇÕES GOVERNAMENTAIS E INVESTIMENTOS
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Amin Ferraz, Daniel, primary, Ribeiro Galvão, Eduardo, additional, CRISTINA OLIVEIRA GOZETTO, ANDRÉA, additional, RENATO DE ALMEIDA, CARLOS, additional, HINDEN D’ELIA, ELIZABETH, additional, MOTA SILVEIRA, GABRIEL, additional, ANTONELLA LORENZETTI, MARIA, additional, CRISTINA WERLE REGULY, MARIA, additional, SOARES LIMA, RENATA, additional, NAVARRO, RODRIGO, additional, M. HORNER HOE, VERÔNICA, additional, and REGINA MANSI, VIVIANE, additional
- Published
- 2017
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15. RNA modifications go viral.
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Nandan S Gokhale and Stacy M Horner
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Immunologic diseases. Allergy ,RC581-607 ,Biology (General) ,QH301-705.5 - Published
- 2017
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16. WTAP targets the METTL3 m
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Matthew T, Sacco, Katherine M, Bland, and Stacy M, Horner
- Subjects
Cell Nucleus ,Humans ,RNA, Viral ,Cell Cycle Proteins ,Hepacivirus ,Methyltransferases ,RNA Splicing Factors ,RNA, Messenger ,Hepatitis C ,Article ,Virus-Cell Interactions - Abstract
Modification of the hepatitis C virus (HCV) positive-strand RNA genome by N6-methyladenosine (m(6)A) regulates the viral life cycle. This life cycle takes place solely in the cytoplasm, while m(6)A addition on cellular mRNA takes place in the nucleus. Thus, the mechanisms by which m(6)A is deposited on the viral RNA have been unclear. In this work, we find that m(6)A modification of HCV RNA by the m(6)A-methyltransferase proteins methyltransferase-like 3 and 14 (METTL3 and METTL14) is regulated by Wilms’ tumor 1-associating protein (WTAP). WTAP, a predominantly nuclear protein, is an essential member of the cellular mRNA m(6)A-methyltransferase complex and known to target METTL3 to mRNA. We found that HCV infection induces localization of WTAP to the cytoplasm. Importantly, we found that WTAP is required for both METTL3 interaction with HCV RNA and m(6)A modification across the viral RNA genome. Further, we found that WTAP, like METTL3 and METTL14, negatively regulates the production of infectious HCV virions, a process that we have previously shown is regulated by m(6)A. Excitingly, WTAP regulation of both HCV RNA m(6)A modification and virion production was independent of its ability to localize to the nucleus. Together, these results reveal that WTAP is critical for HCV RNA m(6)A modification by METTL3 and METTL14 in the cytoplasm. IMPORTANCE Positive-strand RNA viruses such as HCV represent a significant global health burden. Previous work has described that HCV RNA contains the RNA modification m(6)A and how this modification regulates viral infection. Yet, how this modification is targeted to HCV RNA has remained unclear due to the incompatibility of the nuclear cellular processes that drive m(6)A modification with the cytoplasmic HCV life cycle. In this study, we present evidence for how m(6)A modification is targeted to HCV RNA in the cytoplasm by a mechanism in which WTAP recruits the m(6)A-methyltransferase METTL3 to HCV RNA. This targeting strategy for m(6)A modification of cytoplasmic RNA viruses is likely relevant for other m(6)A-modified positive-strand RNA viruses with cytoplasmic life cycles such as enterovirus 71 and SARS-CoV-2 and provides an exciting new target for potential antiviral therapies.
- Published
- 2022
17. WTAP targets the METTL3 m6A-methyltransferase complex to cytoplasmic hepatitis C virus RNA to regulate infection
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Matthew T. Sacco, Katherine M. Bland, and Stacy M. Horner
- Abstract
Modification of the hepatitis C virus (HCV) positive-strand RNA genome by N6-methyladenosine (m6A) regulates the viral lifecycle. This lifecycle takes place solely in the cytoplasm, while m6A addition on cellular mRNA takes place in the nucleus. Thus, the mechanisms by which m6A is deposited on the viral RNA have been unclear. In this work, we find that m6A modification of HCV RNA by the m6A-methyltransferase proteins METTL3 and METTL14 is regulated by WTAP. WTAP, a predominantly nuclear protein, is an essential member of the cellular mRNA m6A-methyltransferase complex and known to target METTL3 to mRNA. We found that HCV infection induces localization of WTAP to the cytoplasm. Importantly, we found that WTAP is required for both METTL3 interaction with HCV RNA and for m6A modification across the viral RNA genome. Further, we found that WTAP, like METTL3 and METTL14, negatively regulates the production of infectious HCV virions, a process that we have previously shown is regulated by m6A. Excitingly, WTAP regulation of both HCV RNA m6A modification and virion production were independent of its ability to localize to the nucleus. Together, these results reveal that WTAP is critical for HCV RNA m6A modification by METTL3 and METTL14 in the cytoplasm.IMPORTANCEPositive-strand RNA viruses such as HCV represent a significant global health burden. Previous work has described how HCV RNA contains the RNA modification m6A and how this modification regulates viral infection. Yet, how this modification is targeted to HCV RNA has remained unclear due to the incompatibility of the nuclear cellular processes that drive m6A modification with the cytoplasmic HCV lifecycle. In this study, we present evidence for how m6A modification is targeted to HCV RNA in the cytoplasm by a mechanism in which WTAP recruits the m6A-methyltransferase METTL3 to HCV RNA. This targeting strategy for m6A modification of cytoplasmic RNA viruses is likely relevant for other m6A-modified positive-strand RNA viruses with cytoplasmic lifecycles such as enterovirus 71 and SARS-CoV-2 and provides an exciting new target for potential antiviral therapies.
- Published
- 2022
18. 992 RESULTS OF A PILOT HIV/FRAILTY CLINIC - CAN COMPREHENSIVE GERIATRIC ASSESSMENT BENEFIT FRAIL PEOPLE LIVING WITH HIV?
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H Morrow, M Horner, and R Thomson-Glover
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Aging ,General Medicine ,Geriatrics and Gerontology - Abstract
Introduction Frailty has been recognised among people living with human immunodeficiency virus (HIV) and will become more prevalent in coming years given treatment success (Pathai et al J Gerontol A Biol Sci Med Sci 2014;69:833–842). Assessment of frailty and its common syndromes through comprehensive geriatric assessment (CGA) is routinely delivered by geriatricians and is likely to benefit these patients. We piloted a clinic to assess whether a future service would be beneficial for people living with HIV and frailty. Method 10 patients from the local HIV service, with suspected frailty, were referred to the Frailty Unit for assessment in May 2021. Each patient was assessed for frailty using the Fried model. They underwent CGA which included medication review, therapy assessment, cognitive assessment, using the Montreal Cognitive Assessment (MOCA), and review by a geriatrician. Results Seven people attended. Six underwent full assessment and one left prior to undergoing medical review. Patient demographics: all white males; mean age 53 years; mean years since HIV diagnosis 11.3; mean Nadir CD4 count 220.4; four with undetectable viral load and three low level viraemia. Four were classified as frail and three pre-frail. All were multimorbid (mean no. co-morbidities, 7.1). Significant medical issues were identified in four patients requiring further investigation and/or referral to other specialities. Polypharmacy was prevalent (mean no. medications 11.1) and medication adjustments were suggested for all patients. The mean MOCA score was 25.7, with two scoring less than 26 prompting memory service referral. Five patients had ongoing physiotherapy/occupational therapy needs. Conclusion This pilot demonstrated that a CGA approach to frail patients living with HIV identified significant multimorbidity, polypharmacy, cognitive impairment and therapy needs. This allowed for recommendations to be made to improve medical care, optimise function and improve quality of life. Consequently, a permanent HIV/Frailty service and referral pathway have been developed.
- Published
- 2022
19. Interphysician weight bias: A cross‐sectional observational survey study to guide implicit bias training in the medical workplace
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Leigh McLean, Adriana M. Horner, Miriam Kulkarni, Elizabeth Fernandez, Mary McLean, Annie C. McLean-Holden, Laura D. Melville, and Linelle F. Campbell
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Adult ,Male ,genetic structures ,Attitude of Health Personnel ,education ,Correlation ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Bias ,Health care ,Humans ,Medicine ,Obesity ,Workplace ,Aged ,Aged, 80 and over ,business.industry ,Implicit-association test ,030208 emergency & critical care medicine ,Survey research ,General Medicine ,Middle Aged ,Cross-Sectional Studies ,Scale (social sciences) ,Emergency Medicine ,Female ,Observational study ,Implicit bias ,business ,Body mass index ,Prejudice ,Clinical psychology - Abstract
OBJECTIVES Implicit bias contributes to both health care disparities and professional limitations, and it exists among physicians. Prior literature has described physician weight bias (WB) toward patients, but little research has investigated interphysician WB. This study describes the prevalence of interphysician implicit WB and investigates the relationships between implicit, explicit, and professional biases. The authors hypothesized that the majority of physicians possess interphysician implicit WB and that the degree of implicit bias has a direct relationship with explicit and professional WB. METHODS In this cross-sectional study, a survey was used to measure interphysician implicit, explicit, and professional WB. It included adaptations of two previously validated measures (the Implicit Association Test and the Crandall Anti-fat Attitudes Questionnaire) and an investigator developed and tested Professional Weight Bias Scale. The survey was distributed electronically via medical society message boards, email lists, and social media groups. RESULTS A total of 620 physicians and medical students participated. Fifty-eight percent were female, ages ranged from 22 to 83 years (mean = 44 years), and body mass index (BMI) ranged from 16 to 59 (mean = 26). Descriptive analyses revealed that 87% had some degree of implicit interphysician antifat bias, with 31% and 34% categorized as moderate and severe, respectively. Correlation and multiple regression analyses revealed that male sex, increased age, and decreased BMI were related to increased implicit bias, controlling for all other factors. Furthermore, implicit, explicit, and professional bias all had significant, direct relationships with each other. CONCLUSIONS Our findings highlight the prevalence of interphysician implicit WB; the strong correlations between implicit, explicit, and professional WB; and the potential disparities faced by physicians with obesity. These results may be used to guide implicit bias training for a more inclusive medical workplace.
- Published
- 2021
20. N6-Methyladenosine Regulates Host Responses to Viral Infection
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Michael J. McFadden and Stacy M. Horner
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0303 health sciences ,Host (biology) ,viruses ,medicine.medical_treatment ,Biology ,Biochemistry ,Viral infection ,Cell function ,Cell biology ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Immune system ,Cytokine ,chemistry ,RNA modification ,medicine ,Viral rna ,N6-Methyladenosine ,Molecular Biology ,030217 neurology & neurosurgery ,030304 developmental biology - Abstract
Recent discoveries have revealed that, during viral infection, the presence of the RNA modification N6-methyladenosine (m6A) on viral and cellular RNAs has profound impacts on infection outcome. Although m6A directly regulates many viral RNA processes, its effects on cellular RNAs and pathways during infection have only recently begun to be elucidated. Disentangling the effects of m6A on viral and host RNAs remains a challenge for the field. m6A has been found to regulate host responses such as viral RNA sensing, cytokine responses, and immune cell functions. We highlight recent findings describing how m6A modulates host responses to viral infection and discuss future directions that will lead to a synergistic understanding of the processes by which m6A regulates viral infection.
- Published
- 2021
21. Breeding for fire blight resistance in an interspecific pear breeding programme
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L.K. Jesson, V.G.M. Bus, M. Aldsworth, M. Horner, R.K. Volz, and L. Brewer
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Horticulture ,PEAR ,Resistance (ecology) ,biology ,Fire blight ,Interspecific competition ,biology.organism_classification - Published
- 2021
22. Acute Flaccid Paralysis Associated with Novel Enterovirus C105
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Liana M. Horner, Melinda D. Poulter, J. Nicholas Brenton, and Ronald B. Turner
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enterovirus ,rhinovirus ,flaccid paralysis ,viruses ,enterovirus C105 ,Medicine ,Infectious and parasitic diseases ,RC109-216 - Abstract
An outbreak of acute flaccid paralysis among children in the United States during summer 2014 was tentatively associated with enterovirus D68 infection. This syndrome in a child in fall 2014 was associated with enterovirus C105 infection. The presence of this virus strain in North America may pose a diagnostic challenge.
- Published
- 2015
- Full Text
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23. Voice Stress in Muscle and Bone: Parasite or Symbiont?
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Nicholas M. Horner
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Visual Arts and Performing Arts ,Stressor ,Stress (linguistics) ,Parasite hosting ,Biology ,Music ,Language and Linguistics ,Developmental psychology - Abstract
Today, in the United States, stressors abound. Familial, professional, religious, and social obligations, compounded by demanding digital interactions, can feel overwhelming to many. The average Am...
- Published
- 2020
24. Signaling from the RNA sensor RIG-I is regulated by ufmylation
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Dia C. Beachboard, Stacy M. Horner, Moonhee Park, Daltry L. Snider, and Kristen A. Murphy
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Ubiquitin-Protein Ligases ,viruses ,RNA-binding protein ,chemical and pharmacologic phenomena ,RNA Virus Infections ,Humans ,Receptors, Immunologic ,Innate immune system ,Multidisciplinary ,biology ,RIG-I ,Chemistry ,Endoplasmic reticulum ,virus diseases ,RNA ,Signal transducing adaptor protein ,biochemical phenomena, metabolism, and nutrition ,Immunity, Innate ,Ubiquitin ligase ,Cell biology ,14-3-3 Proteins ,biology.protein ,DEAD Box Protein 58 ,RNA, Viral ,Interferons ,Signal transduction ,Signal Transduction - Abstract
The RNA binding protein RIG-I is a key initiator of the antiviral innate immune response. The signaling that mediates the antiviral response downstream of RIG-I is transduced through the adaptor protein MAVS and results in the induction of type I and III interferons (IFN). This signal transduction occurs at endoplasmic reticulum (ER)-mitochondrial contact sites, to which RIG-I and other signaling proteins are recruited following their activation. RIG-I signaling is highly regulated to prevent aberrant activation of this pathway and dysregulated induction of IFN. Previously, we identified UFL1, the E3 ligase of the ubiquitin-like modifier conjugation system called ufmylation, UFL1, as one of the proteins recruited to membranes at ER-mitochondrial contact sites in response to RIG-I activation. Here, we show that UFL1, as well as the process of ufmylation, promote IFN induction in response to RIG-I activation. We find that following RNA virus infection, UFL1 is recruited to the membrane targeting protein 14-3-3ε, and that this complex is then recruited to activated RIG-I to promote downstream innate immune signaling. Importantly, we found that 14-3-3ε has an increase in UFM1-conjugation following RIG-I activation. Additionally, loss of cellular ufmylation prevents the interaction of 14-3-3ε with RIG-I, which abrogates the interaction of RIG-I with MAVS and thus downstream signal transduction that induces IFN. Our results define ufmylation as an integral regulatory component of the RIG-I signaling pathway and as a post-translational control for IFN induction.SignificanceThe viral RNA sensor RIG-I initiates the antiviral innate immune response by activating a signaling cascade that induces interferon. Activation of the RIG-I signaling pathway is highly regulated to quickly mount a protective immune response while preventing dysregulation that can lead to excessive inflammation or autoimmune disorders. Here, we characterize one such mechanism of regulation. We describe that UFL1, an E3 ligase for the ubiquitin-like modifier conjugation system called ufmylation, is important to promote RIG-I signaling. Using molecular approaches, we show that ufmylation promotes RIG-I interaction with the membrane targeting protein 14-3-3ε. As such, ufmylation positively regulates RIG-I recruitment to its signaling adaptor proteins MAVS for induction of interferon in response to RNA virus infection.
- Published
- 2022
25. Direct RNA sequencing reveals m6A modifications on adenovirus RNA are necessary for efficient splicing
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Jonathan S. Abebe, Alexa B. R. McIntyre, Matthew D. Weitzman, Alexander M. Price, Nandan S. Gokhale, Christopher E. Mason, Daniel P. Depledge, Ashley N. Della Fera, Katharina E. Hayer, Stacy M. Horner, and Angus C. Wilson
- Subjects
0301 basic medicine ,Sequence analysis ,Science ,viruses ,genetic processes ,General Physics and Astronomy ,Computational biology ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Transcriptome ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Gene Knockdown Techniques ,natural sciences ,lcsh:Science ,Multidisciplinary ,RNA ,DNA virus ,General Chemistry ,030104 developmental biology ,Viral replication ,chemistry ,RNA splicing ,lcsh:Q ,030217 neurology & neurosurgery ,DNA - Abstract
Adenovirus is a nuclear replicating DNA virus reliant on host RNA processing machinery. Processing and metabolism of cellular RNAs can be regulated by METTL3, which catalyzes the addition of N6-methyladenosine (m6A) to mRNAs. While m6A-modified adenoviral RNAs have been previously detected, the location and function of this mark within the infectious cycle is unknown. Since the complex adenovirus transcriptome includes overlapping spliced units that would impede accurate m6A mapping using short-read sequencing, here we profile m6A within the adenovirus transcriptome using a combination of meRIP-seq and direct RNA long-read sequencing to yield both nucleotide and transcript-resolved m6A detection. Although both early and late viral transcripts contain m6A, depletion of m6A writer METTL3 specifically impacts viral late transcripts by reducing their splicing efficiency. These data showcase a new technique for m6A discovery within individual transcripts at nucleotide resolution, and highlight the role of m6A in regulating splicing of a viral pathogen.
- Published
- 2020
26. Hepatitis delta genotype 5 is associated with favourable disease outcome and better response to treatment compared to genotype 1
- Author
-
Ivana Carey, M. Horner, Kosh Agarwal, Matthew Bruce, D. Shang, Geoffrey Dusheiko, M. Spaan, and Gastroenterology & Hepatology
- Subjects
Male ,0301 basic medicine ,HBsAg ,Cirrhosis ,viruses ,medicine.disease_cause ,Gastroenterology ,Liver disease ,0302 clinical medicine ,Risk Factors ,Genotype ,Coinfection ,virus diseases ,Middle Aged ,Prognosis ,Hepatitis D ,Treatment Outcome ,Disease Progression ,Female ,030211 gastroenterology & hepatology ,Hepatitis Delta Virus ,Adult ,Hepatitis B virus ,medicine.medical_specialty ,Adolescent ,Antiviral Agents ,Virus ,Young Adult ,03 medical and health sciences ,Hepatitis B, Chronic ,SDG 3 - Good Health and Well-being ,Internal medicine ,medicine ,Humans ,Hepatitis Antibodies ,Aged ,Retrospective Studies ,Hepatitis B Surface Antigens ,Hepatology ,business.industry ,Retrospective cohort study ,biochemical phenomena, metabolism, and nutrition ,medicine.disease ,Cross-Sectional Studies ,030104 developmental biology ,business ,Follow-Up Studies - Abstract
Background & Aims Coinfection with HDV causes rapid progression to liver cirrhosis and hepatic decompensation in patients with chronic hepatitis B. Factors that are associated with disease progression are poorly understood. In this study we aim to identify risk factors associated with disease progression and better characterise clinical differences and treatment response between HDV genotype 1 and 5. Methods In this retrospective study, all patients under our care between 2005 and 2016 with HBV/HDV coinfection (HBsAg+, anti-HDV antibodies positive) were analysed. Patients were excluded if follow-up was less than 6 months, if they had HCV and/or HIV coinfection or an acute HDV infection. Demographic data, stage of liver disease, development of liver complications and treatment response were recorded. Results One-hundred seven patients (mean age 36.0 years, 57% male) were followed for a median period of 4.4 years (range 0.6–28.1 years); 64% were of African origin and 17% were of European origin, with 28% of patients being cirrhotic at first visit; 43% patients had actively replicating HDV virus (anti-HDV-IgG+, anti-HDV-IgM+ or HDV RNA+) and 57% of patients were HDV exposed (anti-HDV-IgG+, HDV RNA-). Patients with actively replicating HDV more often developed liver complications than HDV-exposed patients (p = 0.002), but no differences in baseline characteristics were observed. Patients with HDV genotype 5 less often developed cirrhosis or hepatic decompensation compared to patients with HDV genotype 1. Twenty-four patients were treated with peg-IFN and post-treatment response was significantly better in patients infected with genotype 5 (10% GT1 vs. 64% GT5, p = 0.013). Conclusion Patients infected with HDV genotype 5 appear to have a better prognosis with fewer episodes of hepatic decompensation and better response to peg-IFN treatment than patients infected with HDV genotype 1. Lay summary Hepatitis delta is a virus that affects the liver. The virus is known to have different subtypes, called genotypes. With this research we discovered that hepatitis delta virus genotype 1 behaves differently than genotype 5 and causes faster development of liver disease. This is important for education of our patients and to determine how often we need to check our patients.
- Published
- 2020
27. Development of a Rule-Based Text Mining Algorithm to Identify Sleep Complaints in Primary Care Progress Notes
- Author
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M. Horner, N. Abul-el-rub, M.P. Mays, and D. Mazzotti
- Subjects
General Medicine - Published
- 2022
28. A Fluorescent Cell-Based System for Imaging Zika Virus Infection in Real-Time
- Author
-
Michael J. McFadden, Aaron Mitchell-Dick, Christine Vazquez, Allison E. Roder, Kevin F. Labagnara, John J. McMahon, Debra L. Silver, and Stacy M. Horner
- Subjects
Zika virus (ZIKV) ,NS2B-NS3 ,NS4B-NS5 ,reporter ,fluorescence ,live cell imaging ,apoptosis ,Microbiology ,QR1-502 - Abstract
Zika virus (ZIKV) is a re-emerging flavivirus that is transmitted to humans through the bite of an infected mosquito or through sexual contact with an infected partner. ZIKV infection during pregnancy has been associated with numerous fetal abnormalities, including prenatal lethality and microcephaly. However, until recent outbreaks in the Americas, ZIKV has been relatively understudied, and therefore the biology and pathogenesis of ZIKV infection remain incompletely understood. Better methods to study ZIKV infection in live cells could enhance our understanding of the biology of ZIKV and the mechanisms by which ZIKV contributes to fetal abnormalities. To this end, we developed a fluorescent cell-based reporter system allowing for live imaging of ZIKV-infected cells. This system utilizes the protease activity of the ZIKV non-structural proteins 2B and 3 (NS2B-NS3) to specifically mark virus-infected cells. Here, we demonstrate the utility of this fluorescent reporter for identifying cells infected by ZIKV strains of two lineages. Further, we use this system to determine that apoptosis is induced in cells directly infected with ZIKV in a cell-autonomous manner. Ultimately, approaches that can directly track ZIKV-infected cells at the single cell-level have the potential to yield new insights into the host-pathogen interactions that regulate ZIKV infection and pathogenesis.
- Published
- 2018
- Full Text
- View/download PDF
29. Successes and Challenges on the Road to Cure Hepatitis C.
- Author
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Stacy M Horner and Susanna Naggie
- Subjects
Immunologic diseases. Allergy ,RC581-607 ,Biology (General) ,QH301-705.5 - Published
- 2015
- Full Text
- View/download PDF
30. How RNA modifications regulate the antiviral response
- Author
-
Matthew T. Sacco, Matthew G Thompson, and Stacy M. Horner
- Subjects
Messenger RNA ,Adenosine ,Immunology ,Pattern recognition receptor ,Cellular homeostasis ,RNA ,Biology ,Antiviral Agents ,Article ,Immunity, Innate ,Cell biology ,chemistry.chemical_compound ,chemistry ,RNA editing ,Virus Diseases ,Gene expression ,Nucleic acid ,Immunology and Allergy ,Humans ,RNA, Viral ,N6-Methyladenosine - Abstract
Induction of the antiviral innate immune response is highly regulated at the RNA level, particularly by RNA modifications. Recent discoveries have revealed how RNA modifications play key roles in cellular surveillance of nucleic acids and in controlling gene expression in response to viral infection. These modifications have emerged as being essential for a functional antiviral response and maintaining cellular homeostasis. In this review, we will highlight these and other discoveries that describe how the antiviral response is controlled by modifications to both viral and cellular RNA, focusing on how mRNA cap modifications, N6-methyladenosine, and RNA editing all contribute to coordinating an efficient response that properly controls viral infection.
- Published
- 2021
31. The m 6 A reader IMP2 directs autoimmune inflammation through an IL-17– and TNFα-dependent C/EBP transcription factor axis
- Author
-
Nandan S. Gokhale, Sarah L. Gaffen, Rami Bechara, Nilesh Amatya, Stacy M. Horner, Yang Li, Rachel D. Bailey, Bianca M. Coleman, Partha S. Biswas, Felix E. Y. Aggor, Chetan V. Jawale, Ning Dai, Anita Bansal, Tiffany C. Taylor, Amanda C. Poholek, and De-Dong Li
- Subjects
0301 basic medicine ,Messenger RNA ,Chemistry ,Effector ,MRNA modification ,Immunology ,General Medicine ,MRNA stabilization ,Cell biology ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,030220 oncology & carcinogenesis ,Enhancer binding ,CEBPB ,Tumor necrosis factor alpha ,Transcription factor - Abstract
Excessive cytokine activity underlies many autoimmune conditions, particularly through the interleukin-17 (IL-17) and tumor necrosis factor-α (TNFα) signaling axis. Both cytokines activate nuclear factor κB, but appropriate induction of downstream effector genes requires coordinated activation of other transcription factors, notably, CCAAT/enhancer binding proteins (C/EBPs). Here, we demonstrate the unexpected involvement of a posttranscriptional "epitranscriptomic" mRNA modification [N6-methyladenosine (m6A)] in regulating C/EBPβ and C/EBPδ in response to IL-17A, as well as IL-17F and TNFα. Prompted by the observation that C/EBPβ/δ-encoding transcripts contain m6A consensus sites, we show that Cebpd and Cebpb mRNAs are subject to m6A modification. Induction of C/EBPs is enhanced by an m6A methylase "writer" and suppressed by a demethylase "eraser." The only m6A "reader" found to be involved in this pathway was IGF2BP2 (IMP2), and IMP2 occupancy of Cebpd and Cebpb mRNA was enhanced by m6A modification. IMP2 facilitated IL-17-mediated Cebpd mRNA stabilization and promoted translation of C/EBPβ/δ in response to IL-17A, IL-17F, and TNFα. RNA sequencing revealed transcriptome-wide IL-17-induced transcripts that are IMP2 influenced, and RNA immunoprecipitation sequencing identified the subset of mRNAs that are directly occupied by IMP2, which included Cebpb and Cebpd Lipocalin-2 (Lcn2), a hallmark of autoimmune kidney injury, was strongly dependent on IL-17, IMP2, and C/EBPβ/δ. Imp2-/- mice were resistant to autoantibody-induced glomerulonephritis (AGN), showing impaired renal expression of C/EBPs and Lcn2 Moreover, IMP2 deletion initiated only after AGN onset ameliorated disease. Thus, posttranscriptional regulation of C/EBPs through m6A/IMP2 represents a previously unidentified paradigm of cytokine-driven autoimmune inflammation.
- Published
- 2021
32. FTO suppresses STAT3 activation and modulates proinflammatory interferon-stimulated gene expression
- Author
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Stacy M. Horner, Kim Y. Somfleth, Matthew T. Sacco, Nandan S. Gokhale, Moonhee Park, Kristen A. Murphy, and Michael J. McFadden
- Subjects
STAT3 Transcription Factor ,Alpha-Ketoglutarate-Dependent Dioxygenase FTO ,Gene Expression ,Article ,Proinflammatory cytokine ,Structural Biology ,Interferon ,Transcription (biology) ,medicine ,Humans ,RNA, Messenger ,STAT3 ,Molecular Biology ,Transcription factor ,Inflammation ,Messenger RNA ,biology ,Chemistry ,Interferon-stimulated gene ,MRNA modification ,nutritional and metabolic diseases ,Methyltransferases ,Cell biology ,Gene Expression Regulation ,Interferon Type I ,biology.protein ,Demethylase ,medicine.drug - Abstract
Signaling initiated by type I interferon (IFN) results in the induction of hundreds of IFN-stimulated genes (ISGs). The type I IFN response is important for antiviral restriction, but aberrant activation of this response can lead to inflammation and autoimmunity. Regulation of this response is incompletely understood. We previously reported that the mRNA modification m6A and its deposition enzymes, METTL3 and METTL14 (METTL3/14), promote the type I IFN response by directly modifying the mRNA of a subset of ISGs to enhance their translation. Here, we determined the role of the RNA demethylase FTO in the type I IFN response. FTO, which can remove either m6A or the cap-adjacent m6Am RNA modifications, has previously been associated with obesity and body mass index, type 2 diabetes, cardiovascular disease, and inflammation. We found that FTO suppresses the transcription of a distinct set of ISGs, including many known pro-inflammatory genes, and that this regulation is not through the actions of FTO on m6Am. Further, we found that depletion of FTO led to activation of STAT3, a transcription factor that mediates responses to various cytokines, but whose role in the type I IFN response is not well understood. This activation of STAT3 increased the expression of a subset of ISGs. Importantly, this increased ISG induction resulting from FTO depletion was partially ablated by depletion of STAT3. Together, these results reveal that FTO negatively regulates STAT3-mediated signaling that induces proinflammatory ISGs during the IFN response, highlighting an important role for FTO in suppression of inflammatory genes.
- Published
- 2021
33. Academic rigor in Christian schools: The academic effect of Bible courses and integration of faith and learning in secondary education
- Author
-
Jeffrey M. Horner
- Subjects
Secondary education ,030504 nursing ,05 social sciences ,Religious studies ,050301 education ,Academic achievement ,Academic standards ,Education ,03 medical and health sciences ,Integration of faith and learning ,Pedagogy ,Religious education ,Spiritual development ,Sociology ,Advanced Placement ,0305 other medical science ,0503 education ,Academic rigor - Abstract
This study analyzes the correlation between required years of Bible courses and academic rigor at select private Christian schools. These findings, derived from the author’s doctoral research, show a threshold of under 4 years of required Bible courses for optimal academic perception among these schools. This threshold correlates with a medium to strong effect size and demonstrates a tension between academic strength and integration of faith and learning. This finding calls attention to Christian schools’ need to examine their priorities as both Christian and academic institutions. Theological and practical implications include extensions of the doctrine of sovereignty and curricular design.
- Published
- 2019
34. Regulation of Viral Infection by the RNA Modification N6-Methyladenosine
- Author
-
Nandan S. Gokhale, Graham D. Williams, and Stacy M. Horner
- Subjects
0303 health sciences ,Innate immune system ,Regulator ,RNA ,Biology ,Viral infection ,Cell biology ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Immune system ,chemistry ,Virology ,RNA modification ,N6-Methyladenosine ,Post-transcriptional regulation ,030217 neurology & neurosurgery ,030304 developmental biology - Abstract
In recent years, the RNA modification N6-methyladenosine (m6A) has been found to play a role in the life cycles of numerous viruses and also in the cellular response to viral infection. m6A has emerged as a regulator of many fundamental aspects of RNA biology. Here, we highlight recent advances in techniques for the study of m6A, as well as advances in our understanding of the cellular machinery that controls the addition, removal, recognition, and functions of m6A. We then summarize the many newly discovered roles of m6A during viral infection, including how it regulates innate and adaptive immune responses to infection. Overall, the goals of this review are to summarize the roles of m6A on both cellular and viral RNAs and to describe future directions for uncovering new functions of m6A during infection.
- Published
- 2019
35. The small GTPase RAB1B promotes antiviral innate immunity by interacting with TNF receptor–associated factor 3 (TRAF3)
- Author
-
Dia C. Beachboard, Daltry L. Snider, Madhuvanthi Vijayan, Michael J. McFadden, Sydney Stanley, Stacy M. Horner, Dillon J. Fernando, Graham D. Williams, and Moonhee Park
- Subjects
0301 basic medicine ,TRAF3 ,Immunology ,Biology ,Biochemistry ,03 medical and health sciences ,Interferon ,Chlorocebus aethiops ,medicine ,Animals ,Humans ,Receptors, Immunologic ,Vero Cells ,Molecular Biology ,Mitochondrial antiviral-signaling protein ,Innate immune system ,TNF Receptor-Associated Factor 3 ,030102 biochemistry & molecular biology ,Zika Virus Infection ,Pattern recognition receptor ,Signal transducing adaptor protein ,Interferon-beta ,Cell Biology ,Immunity, Innate ,Cell biology ,rab1 GTP-Binding Proteins ,HEK293 Cells ,030104 developmental biology ,DEAD Box Protein 58 ,IRF3 ,Protein Binding ,Signal Transduction ,medicine.drug - Abstract
Innate immune detection of viral nucleic acids during viral infection activates a signaling cascade that induces type I and type III IFNs as well as other cytokines, to generate an antiviral response. This signaling is initiated by pattern recognition receptors, such as the RNA helicase retinoic acid-inducible gene I (RIG-I), that sense viral RNA. These sensors then interact with the adaptor protein mitochondrial antiviral signaling protein (MAVS), which recruits additional signaling proteins, including TNF receptor–associated factor 3 (TRAF3) and TANK-binding kinase 1 (TBK1), to form a signaling complex that activates IFN regulatory factor 3 (IRF3) for transcriptional induction of type I IFNs. Here, using several immunological and biochemical approaches in multiple human cell types, we show that the GTPase-trafficking protein RAB1B up-regulates RIG-I pathway signaling and thereby promotes IFN-β induction and the antiviral response. We observed that RAB1B overexpression increases RIG-I–mediated signaling to IFN-β and that RAB1B deletion reduces signaling of this pathway. Additionally, loss of RAB1B dampened the antiviral response, indicated by enhanced Zika virus infection of cells depleted of RAB1B. Importantly, we identified the mechanism of RAB1B action in the antiviral response, finding that it forms a protein complex with TRAF3 to facilitate the interaction of TRAF3 with mitochondrial antiviral signaling protein. We conclude that RAB1B regulates TRAF3 and promotes the formation of innate immune signaling complexes in response to nucleic acid sensing during RNA virus infection.
- Published
- 2019
36. 158 Skin cancer risk in people living with HIV during the antiretroviral therapy era
- Author
-
Y.T. Luu, Q. Luo, M. Horner, M. Shiels, E. Engels, and M. Sargen
- Subjects
Cell Biology ,Dermatology ,Molecular Biology ,Biochemistry - Published
- 2022
37. Lungfish axial muscle function and the vertebrate water to land transition.
- Author
-
Angela M Horner and Bruce C Jayne
- Subjects
Medicine ,Science - Abstract
The role of axial form and function during the vertebrate water to land transition is poorly understood, in part because patterns of axial movement lack morphological correlates. The few studies available from elongate, semi-aquatic vertebrates suggest that moving on land may be powered simply from modifications of generalized swimming axial motor patterns and kinematics. Lungfish are an ideal group to study the role of axial function in terrestrial locomotion as they are the sister taxon to tetrapods and regularly move on land. Here we use electromyography and high-speed video to test whether lungfish moving on land use axial muscles similar to undulatory swimming or demonstrate novelty. We compared terrestrial lungfish data to data from lungfish swimming in different viscosities as well as to salamander locomotion. The terrestrial locomotion of lungfish involved substantial activity in the trunk muscles but almost no tail activity. Unlike other elongate vertebrates, lungfish moved on land with a standing wave pattern of axial muscle activity that closely resembled the pattern observed in terrestrially locomoting salamanders. The similarity in axial motor pattern in salamanders and lungfish suggests that some aspects of neuromuscular control for the axial movements involved in terrestrial locomotion were present before derived appendicular structures.
- Published
- 2014
- Full Text
- View/download PDF
38. A First Look: Disparities in COVID-19 Mortality Among US-Born and Foreign-Born Minnesota Residents
- Author
-
Kimberly M. Horner, Jonathon P. Leider, and Elizabeth Wrigley-Field
- Subjects
medicine.medical_specialty ,Research Briefs ,Refugee ,Mortality rate ,media_common.quotation_subject ,Public health ,Immigration ,COVID-19 ,Management, Monitoring, Policy and Law ,Destinations ,Health equity ,Geography ,Foreign born ,Pandemic ,medicine ,Health disparities ,Demography ,media_common - Abstract
This research brief provides one of the first examinations of the impact of COVID-19 mortality on immigrant communities in the United States. In the absence of national data, we examine COVID-19 deaths in Minnesota, historically one of the major U.S. refugee destinations, using individual-level death certificates obtained from the Minnesota Department of Health Office of Vital Records. Minnesota’s foreign-born crude COVID-19 death rates were similar to rates for the US-born, but COVID-19 death rates adjusted for age and gender were twice as high among the foreign-born. Among foreign-born Latinos, in particular, COVID-19 mortality was concentrated in relatively younger, prime working age men. Moreover, the place-based and temporal patterns of COVID-19 mortality were quite distinct, with the majority of US-born mortality concentrated in long-term care facilities and late in 2020, and foreign-born mortality occurring outside of residential institutions and earlier in the pandemic. The disparate impacts of COVID-19 for foreign-born Minnesotans demonstrate the need for targeted public health planning and intervention in immigrant communities. Supplementary Information The online version contains supplementary material available at 10.1007/s11113-021-09668-1.
- Published
- 2021
39. Lieutenant-General Sir Sydney Rowell: Dismissal of a Corps Commander
- Author
-
D. M. Horner
- Subjects
History ,Dismissal ,Law - Published
- 2021
40. Major-General George Alan Vasey: Commander, 7th Australian Division
- Author
-
D. M. Horner
- Subjects
GEORGE (programming language) ,media_common.quotation_subject ,Art ,Division (mathematics) ,Classics ,media_common - Published
- 2021
41. Lieutenant-General Sir Vernon Sturdee: The Chief of the General Staff as Commander
- Author
-
D. M. Horner
- Subjects
Prime minister ,geography ,Government ,geography.geographical_feature_category ,White (horse) ,History ,Fell ,Management - Abstract
As the only Australian of the trio, none had greater responsibility than the Chief of the General Staff (CGS), Vernon Sturdee. The foremost military position in Australia, the mantle of Sir Brudenell White, now fell on the shoulders of the 50-year-old Vernon Sturdee, who a year earlier had been a colonel and Director of Staff Duties at Army Headquarters. From 8 December 1941 onwards for about four months the Chiefs of Staff, Sturdee, Admiral Royle and Air Chief Marshal Burnett, were constantly directed to prepare appreciations for a worried government. After Blamey returned, Sturdee continued serving loyally as CGS until July 1942 when he was appointed head of the Australian military mission in Washington. On the morning of 15 February Sturdee telephoned the Prime Minister and urged him to order the convoys to be diverted to Australia. In late December 1941 the government directed Sturdee to send reinforcements to Malaya.
- Published
- 2021
42. Field Marshal Sir Thomas Blamey: Commander-in-Chief, Australian Military Forces
- Author
-
D. M. Horner
- Subjects
History ,Field (Bourdieu) ,Management - Published
- 2021
43. Introduction
- Author
-
D. M. Horner
- Published
- 2021
44. Outcomes Following Fixation of Vancouver B2/3 Peri-prosthetic Femoral Fractures at a Single Orthopaedic Centre
- Author
-
M Horner, J Pearce, T Okoro, M Mullins, and M Dodd
- Published
- 2021
- Full Text
- View/download PDF
45. Perceived structural vulnerabilities among detained noncitizen immigrants in Minnesota
- Author
-
Christopher Levesque, Olivia Toles, Linus Chan, Jack DeWaard, Kimberly M. Horner, Eric Ryu, and Kazumi Tsuchiya
- Subjects
Male ,Economics ,Epidemiology ,Family support ,Health Status ,Immigration ,Social Sciences ,Criminology ,Geographical locations ,Deportation ,0302 clinical medicine ,Medicine and Health Sciences ,Salaries ,Public and Occupational Health ,030212 general & internal medicine ,media_common ,Immigration detention ,Human Capital ,Multidisciplinary ,Human rights ,Undocumented Immigrants ,Mental Health ,Medicine ,Female ,Thematic analysis ,Economics of Migration ,0305 other medical science ,Behavioral and Social Aspects of Health ,Research Article ,Human Rights ,media_common.quotation_subject ,Minnesota ,Science ,Vulnerable Populations ,03 medical and health sciences ,Political science ,Mental Health and Psychiatry ,Humans ,030505 public health ,United States ,Interpersonal ties ,Philosophy ,Medical Risk Factors ,Labor Economics ,North America ,Residence ,People and places ,Finance - Abstract
Across several decades there has been an unprecedented increase in immigration enforcement including detention and deportation. Immigration detention profoundly impacts those experiencing detention and their family members. An emerging area of research has found that immigrants experience a number of challenges which constrain and limit their decisions, choices, and options for security and integration in the United States due to social, political and structural determinants. These determinants lead to greater structural vulnerabilities among immigrants. The purpose of the current study was to illuminate the perceived vulnerabilities of detained noncitizen immigrants as they are raised and described while attending case hearings at the Bloomington, Minnesota immigration court. Through conducting a thematic analysis of notes derived from third party immigration court observers, three areas of perceived vulnerability were identified. These perceived vulnerabilities include 1) migration and motivations to migrate, 2) structural vulnerabilities (e.g., discrimination, financial insecurity, social ties and family support, stable or fixed residence, English language proficiency, health and mental health) in the US, and 3) challenges in navigating immigration detention. These findings demonstrate that noncitizen immigrants who are undergoing immigration detention are experiencing multiple intersecting vulnerabilities which profoundly impact their lives. Collaborative efforts across sectors are needed to work towards comprehensive immigration reforms including both short-term and long-term solutions to address pressing issues for noncitizens undergoing immigration detention.
- Published
- 2021
46. Modelling of pheromone flow from insect traps
- Author
-
Shuying Chen, Max Suckling, Rachael M. Horner, Mark Jermy, and Tara M. Strand
- Subjects
Flow (mathematics) ,Planetary boundary layer ,media_common.quotation_subject ,Environmental science ,Pheromone ,Insect ,Biological system ,media_common - Published
- 2020
47. Ontogenetic scaling of fore- and hind limb posture in wild chacma baboons (Papio hamadryas ursinus).
- Author
-
Biren A Patel, Angela M Horner, Nathan E Thompson, Louise Barrett, and S Peter Henzi
- Subjects
Medicine ,Science - Abstract
Large-scale interspecific studies of mammals ranging between 0.04-280 kg have shown that larger animals walk with more extended limb joints. Within a taxon or clade, however, the relationship between body size and joint posture is less straightforward. Factors that may affect the lack of congruence between broad and narrow phylogenetic analyses of limb kinematics include limited sampling of (1) ranges of body size, and/or (2) numbers of individuals. Unfortunately, both issues are inherent in laboratory-based or zoo locomotion research. In this study, we examined the relationship between body mass and elbow and knee joint angles (our proxies of fore- and hind limb posture, respectively) in a cross-sectional ontogenetic sample of wild chacma baboons (Papio hamadryas ursinus) habituated in the De Hoop Nature Reserve, South Africa. Videos were obtained from 33 individuals of known age (12 to ≥ 108 months) and body mass (2-29.5 kg) during walking trials. Results show that older, heavier baboons walk with significantly more extended knee joints but not elbow joints. This pattern is consistent when examining only males, but not within the female sample. Heavier, older baboons also display significantly less variation in their hind limb posture compared to lighter, young animals. Thus, within this ontogenetic sample of a single primate species spanning an order of magnitude in body mass, hind limb posture exhibited a postural scaling phenomenon while the forelimbs did not. These findings may further help explain 1) why younger mammals (including baboons) tend to have relatively stronger bones than adults, and 2) why humeri appear relatively weaker than femora (in at least baboons). Finally, this study demonstrates how field-acquired kinematics can help answer fundamental biomechanical questions usually addressed only in animal gait laboratories.
- Published
- 2013
- Full Text
- View/download PDF
48. Combined Effects of Mating Disruption, Insecticides, and the Sterile Insect Technique on
- Author
-
Rachael M, Horner, Peter L, Lo, David J, Rogers, James T S, Walker, and David Maxwell, Suckling
- Subjects
fungi ,market access ,synergistic ,sterile insect technique ,Unmanned Aerial Vehicle ,suppression ,Article ,orchard ,Lepidoptera ,Cydia pomonella ,eradication ,Tortricidae ,mating disruption ,biosecurity - Abstract
Simple Summary Codling moth is a major pest of apples, and was accidentally introduced into New Zealand over 150 years ago. Many countries that New Zealand exports apples to do not have codling moth present and they want to keep it out. Therefore, apple growers must heavily control codling moth populations on their orchards. Currently, the main control tactics are insecticide applications and mating disruption, which uses the moth’s own sex pheromone to make the males unable to find females to mate. We aimed to supplement these tactics with the sterile insect technique (SIT) to further suppress the codling moth on orchards. SIT involves mass rearing and sterilizing codling moth and then releasing them onto orchards where they mate with wild insects resulting in no offspring. We released sterile insects onto seven orchards using unmanned aerial vehicles and ground releases. Six years of the program saw significant drops (90–99%) in wild moth populations. The SIT is an excellent tactic for reducing moth populations in export apple orchards. Abstract Codling moth was introduced into New Zealand, and remains a critical pest for the apple industry. Apples exported to some markets require strict phytosanitary measures to eliminate the risk of larval infestation. Mating disruption and insecticide applications are the principal means of suppression in New Zealand. We tested the potential for the sterile insect technique (SIT) to supplement these measures to achieve local eradication or suppression of this pest. SIT was trialed in an isolated group of six integrated fruit production (IFP) orchards and one organic orchard (total 391 ha), using sterilized insects imported from Canada, with release by unmanned aerial vehicle and from the ground. Eradication was not achieved across the region, but a very high level of codling moth suppression was achieved at individual orchards after the introduction of sterile moths in combination with mating disruption and larvicides. After six years of releases, catches of wild codling moths at three IFP orchards (224 ha) were 90–99% lower than in 2013–2014, the year before releases began. Catches at three other IFP orchards (129 ha) decreased by 67–97% from the year before releases began (2015–2016), from lower initial levels. At a certified organic orchard with a higher initial population under only organic larvicides and mating disruption, by 2019–2020, there was an 81% reduction in wild moths capture from 2016–2017, the year before releases began.
- Published
- 2020
49. N
- Author
-
Michael J, McFadden and Stacy M, Horner
- Subjects
Adenosine ,Virus Diseases ,viruses ,Cytokines ,Humans ,RNA, Viral ,Immunity, Innate ,Article - Abstract
Recent discoveries have revealed that during viral infection the presence of the RNA modification N6-methyladenosine (m(6)A) on viral and cellular RNAs has profound impacts on infection outcome. While m(6)A directly regulates many viral RNA processes, its effects on cellular RNAs and pathways during infection have only recently begun to be elucidated. Disentangling the effects of m(6)A on viral and host RNAs remains a challenge for the field. m(6)A has been found to regulate host responses such as viral RNA sensing, cytokine responses, and immune cell functions. We highlight recent findings describing how m(6)A modulates host responses to viral infection and discuss future directions that will lead to a synergistic understanding of the processes by which m(6)A regulates viral infection.
- Published
- 2020
50. Flipping the script: viral capitalization of RNA modifications
- Author
-
Stacy M. Horner and Matthew T. Sacco
- Subjects
Adenosine ,viruses ,Computational biology ,Biology ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Viral life cycle ,Genetics ,RNA, Messenger ,Molecular Biology ,Gene ,030304 developmental biology ,0303 health sciences ,Messenger RNA ,Review Paper ,2'-O-methylation ,RNA ,RNA-Binding Proteins ,Translation (biology) ,General Medicine ,chemistry ,RNA, Viral ,N6-Methyladenosine ,030217 neurology & neurosurgery ,Function (biology) - Abstract
RNA encoded by RNA viruses is highly regulated so that it can function in multiple roles during the viral life cycle. These roles include serving as the mRNA template for translation or the genetic material for replication as well as being packaged into progeny virions. RNA modifications provide an emerging regulatory dimension to the RNA of viruses. Modification of the viral RNA can increase the functional genomic capacity of the RNA viruses without the need to encode and translate additional genes. Further, RNA modifications can facilitate interactions with host or viral RNA-binding proteins that promote replication or can prevent interactions with antiviral RNA-binding proteins. The mechanisms by which RNA viruses facilitate modification of their RNA are diverse. In this review, we discuss some of these mechanisms, including exploring the unknown mechanism by which the RNA of viruses that replicate in the cytoplasm could acquire the RNA modification N6-methyladenosine.
- Published
- 2020
Catalog
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