139 results on '"Lubensky, I"'
Search Results
2. Sampling strategies for analysis of enterochromaffin-like cell changes in Zollinger-Ellison syndrome
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Bordi, C., Azzoni, C., Ferraro, G., Corleto, Vito Domenico, Gibril, F., DELLE FAVE, Gianfranco, Lubensky, I. A., Venzon, D. J., and Jensen, R. T.
- Published
- 2000
3. MC13-0092 The National Cancer Institute (NCI) specimen resource locator
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Demchok, J., primary, Taube, S., additional, Fombonne, B., additional, and Lubensky, I., additional
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- 2013
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4. Allelic deletion and mutation of the von Hippel-Lindau (VHL) tumor suppressor gene in pancreatic microcystic adenomas
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Vortmeyer, A. O., Lubensky, I. A., Fogt, F., Linehan, W. M., Khettry, U., and Zhuang, Z.
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Adenoma ,Adult ,Aged, 80 and over ,Male ,von Hippel-Lindau Disease ,endocrine system diseases ,Loss of Heterozygosity ,DNA, Neoplasm ,Middle Aged ,urologic and male genital diseases ,Polymerase Chain Reaction ,female genital diseases and pregnancy complications ,Pancreatic Neoplasms ,Humans ,Point Mutation ,Female ,Genes, Tumor Suppressor ,Chromosome Deletion ,neoplasms ,Alleles ,Research Article ,Aged - Abstract
An association between pancreatic microcystic (serous) adenomas (MCAs) and von Hippel-Lindau (VHL) disease has been suggested. However, genetic alterations of the VHL gene in MCAs of the pancreas have never been reported. In this study, we performed genetic analysis of 12 pancreatic MCAs. In 2 cases, VHL disease was documented clinically, and 10 cases were sporadic. For LOH analysis, tumor and normal pancreatic cells were procured from formalin-fixed, paraffin-embedded material using tissue microdissection. After DNA extraction, the samples were amplified by polymerase chain reaction using the polymorphic markers D3S2452, D3S1110, D3S192, and D3S656. In addition, the sporadic tumors were analyzed for VHL gene mutations using probes 3b/10b and K55/K56. Both MCAs associated with VHL disease showed LOH with at least one of the microsatellite markers tested. Among the 10 sporadic cases, 7 tumors showed LOH at the VHL gene locus. A somatic VHL gene mutation on exon 2 was documented in one sporadic case. The study provides the first direct genetic evidence for the role of the VHL gene in MCA tumorigenesis. Furthermore, VHL gene alterations may be detected in both VHL-associated and sporadic pancreatic MCAs.
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- 1997
5. Original Articles: Kidney Cancer: Hereditary Papillary Renal Cell Carcinoma: Clinical Studies in 10 Families
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Zbar, B., Glenn, G., Lubensky, I., Choyke, P., Walther, M., Magnusson, G., Bergerheim, U., Pettersson, S., Amin, M., and Hurley, K.
- Abstract
n/a
- Published
- 1995
6. P55 Molecular diagnostics evaluation laboratories (MoDEL), a program to optimize assays for clinically useful cancer biomarkers
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Jessup, J., primary, Jacobson, J., additional, Lively, T., additional, Lubensky, I., additional, Segal, D., additional, and Taube, S., additional
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- 2007
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7. Cyclophosphamide-induced cystitis and bladder cancer in patients with Wegener granulomatosis.
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Talar-Williams C, Hijazi YM, Walther MM, Linehan WM, Hallahan CW, Lubensky I, Kerr GS, Hoffman GS, Fauci AS, Sneller MC, Talar-Williams, C, Hijazi, Y M, Walther, M M, Linehan, W M, Hallahan, C W, Lubensky, I, Kerr, G S, Hoffman, G S, Fauci, A S, and Sneller, M C
- Abstract
Objective: To describe the incidence of, clinical manifestations of, and risk factors for cyclophosphamide-induced urinary bladder toxicity in patients treated for nonmalignant disease.Design: Retrospective analysis of patients followed at the National Institutes of Allergy and Infectious Diseases from 1967 to 1993.Setting: The Warren G. Magnuson Clinical Center of the National Institutes of Health (NIH).Patients: 145 patients who received cyclophosphamide for the treatment of Wegener granulomatosis and were followed for 0.5 to 27 years (median, 8.5 years), for a total of 1333 patient-years.Measurements: Clinical characteristics, cystoscopic findings, results of cytologic examination of urine, surgical pathology, and total dose and duration of cyclophosphamide therapy were recorded and analyzed using a computer-based information retrieval system.Results: Nonglomerular hematuria occurred in 73 of 145 patients treated with cyclophosphamide (50%). Sixty of the 73 patients with nonglomerular hematuria (82%) had cystoscopy at the NIH. Forty-two of the 60 patients (70%) who had cystoscopy had macroscopic changes consistent with cyclophosphamide-induced bladder injury. Seven patients (5%) developed transitional-cell carcinoma of the urinary bladder. In 6 of these 7 patients, the total cumulative cyclophosphamide dose exceeded 100 g, and the cumulative duration of cyclophosphamide therapy exceeded 2.7 years. Before they were given a diagnosis of bladder cancer, all 7 patients had had one or more episodes of microscopic or gross nonglomerular hematuria. In contrast, none of the 72 patients who had never had nonglomerular hematuria developed bladder cancer. Cox proportional hazards regression analysis showed that only microscopic nonglomerular hematuria was a significant risk factor for the development of bladder cancer (P < 0.01).Conclusion: Long-term oral cyclophosphamide therapy is associated with substantial urotoxicity, including the development of transitional-cell carcinoma of the urinary bladder. In this cohort of patients, the estimated incidence of bladder cancer after the first exposure to cyclophosphamide was 5% at 10 years and 16% at 15 years. Nonglomerular hematuria was a frequent manifestation of cyclophosphamide-induced cystitis, and it identified a subgroup of patients at high risk for the development of bladder cancer. [ABSTRACT FROM AUTHOR]- Published
- 1996
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8. Clinical and genetic analysis of patients with pancreatic neuroendocrine tumours associated with von Hippel-Lindau disease
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Libutti, S K, primary, Linehan, W M, additional, Choyke, P L, additional, Glenn, G, additional, Zbar, B, additional, Klausner, R D, additional, Alexander, H R, additional, Bartlett, D L, additional, Lubensky, I, additional, and Walther, McC, additional
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- 2000
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9. Trisomy 7-Harbouring Non-Random Duplication of the Mutant MET Allele in Hereditary Papillary Renal Carcinomas
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Zhuang, Z., primary, Park, W.-S., additional, Pack, S., additional, Schmidt, L., additional, Vortmeyer, A. O., additional, Pak, E., additional, Pham, T., additional, Weil, R. J., additional, Candidus, S., additional, Lubensky, I. A., additional, Linehan, W. M., additional, Zbar, B., additional, and Weirich, G., additional
- Published
- 1999
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10. Two North American Families With Hereditary Papillary Renal Carcinoma and Identical Novel Mutations in the MET Proto-Oncogene
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Schmidt, L., primary, Junker, K., additional, Weirich, G., additional, Glenn, G., additional, Choyke, P., additional, Lubensky, I., additional, Zhuang, Z., additional, Jeffers, M., additional, Woude, G. Vande, additional, Neumann, H., additional, Walther, M., additional, Linehan, W.M., additional, and Zbar, B., additional
- Published
- 1999
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11. Mutations of the STK11 gene in sporadic gastric carcinoma.
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Park, W S, primary, Moon, Y W, additional, Yang, Y M, additional, Kim, Y S, additional, Kim, Y D, additional, Fuller, B G, additional, Vortmeyer, A O, additional, Fogt, F, additional, Lubensky, I A, additional, and Zhuang, Z, additional
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- 1998
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12. Germline PTEN/MMAC1/TEP1 mutations and association with gastrointestinal manifestations in Cowden disease
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Weber, H.C., primary, Marsh, D., additional, Lubensky, I., additional, Lin, A., additional, and Eng, C., additional
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- 1998
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13. Germline and Somatic Mutations in the Tyrosine Kinase Domain of the MET Proto-Oncogene in Papillary Renal Carcinomas
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Schmidt, L., primary, Duh, F.-M., additional, Chen, F., additional, Kishida, T., additional, Glenn, G., additional, Choyke, P., additional, Scherer, S. W., additional, Zhuang, Z., additional, Lubensky, I., additional, Dean, M., additional, Allikmets, R., additional, Chidambaram, A., additional, Bergerheim, U. R., additional, Feltis, J. T., additional, Casadevall, C., additional, Zamarron, A., additional, Bernues, M., additional, Richard, S., additional, Lips, C. J. M., additional, Walther, M. M., additional, Tsui, L.-C., additional, Geil, L., additional, Orcutt, M. L., additional, Stackhouse, T., additional, Lipan, J., additional, Slife, L., additional, Brauch, H., additional, Decker, J., additional, Niehans, G., additional, Hughson, M. D., additional, Moch, H., additional, Storkel, S., additional, Lerman, M. I., additional, Linehan, W. M., additional, and Zbar, B., additional
- Published
- 1998
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14. Concordance of Genetic Alterations in Poorly Differentiated Colorectal Neuroendocrine Carcinomas and Associated Adenocarcinomas
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Vortmeyer, A. O., primary, Lubensky, I. A., additional, Merino, M. J., additional, Wang, C., additional, Pham, T., additional, Zhuang, Z., additional, and Furth, E. E., additional
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- 1997
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15. NEUROENDOCRINE CARCINOMA IN THREE AIDS PATIENTS
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Lash, A, primary, Lubensky, I, additional, Schwartz, A, additional, Tapper, M., additional, Schoem, S, additional, Zeichner, S, additional, Jankelevich, S, additional, and Jaffe, E, additional
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- 1997
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16. Mutations of the VHL tumour suppressor gene in renal carcinoma
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Gnarra, J.R., primary, Tory, K., additional, Weng, Y., additional, Schmidt, L., additional, Wei, M.H., additional, Li, H., additional, Latif, F., additional, Liu, S., additional, Chen, F., additional, Duh, F.-M., additional, Lubensky, I., additional, Duan, D.R., additional, Florence, C., additional, Pozzatti, R., additional, Walther, M. M., additional, Bander, N.H., additional, Grossman, H.B., additional, Brauch, H., additional, Pomer, S., additional, Brooks, J.D., additional, Isaacs, W.B., additional, Lerman, M.I., additional, Zbar, B., additional, and Linehan, W.M., additional
- Published
- 1994
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17. The Use of Noncryoprotected Frozen Tissue in Diagnostic Electron Microscopic Pathology
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Minda, J.M., primary, Lubensky, I., additional, and Pietra, G.G., additional
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- 1990
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18. Retained gastric antrum syndrome: a forgotten, treatable cause of refractory peptic ulcer disease.
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Gibril, F, Lindeman, R J, Abou-Saif, A, Shojamanesh, H, Roy, P K, Peghini, P L, Reynolds, J C, Lubensky, I A, Jensen, R T, and Sojamanesh, H
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- 2001
19. Sampling strategies for analysis of enterochromaffin-like cell changes in Zollinger-Ellison syndrome.
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Bordi, C, Azzoni, C, Ferraro, G, Corleto, V D, Gibril, F, Delle Fave, G, Lubensky, I A, Venzon, D J, and Jensen, R T
- Abstract
To investigate the optimum number of biopsy specimens to be obtained for enterochromaffin-like (ECL) cell monitoring in hypergastrinemic patients and ECL cell regional variations potentially influencing the results, qualitative ECL cell changes were assessed in 149 patients with Zollinger-Ellison syndrome using jumbo biopsy specimens and a systematic sampling procedure of 4 areas each from the lesser or greater curvature of the gastric body. Of 1,176 specimens examined, 1,101 were adequate. The correlation was excellent between different sites within the greater or lesser curvature. In contrast, a normal ECL cell pattern was more frequent in the lesser curvature, whereas linear hyperplasia was more frequent in the greater curvature. Dysplastic lesions and carcinoid tumors in endoscopically unremarkable mucosa were detected in 3.4% and 1.2% of biopsy specimens, respectively, and were equally distributed between the lesser and greater curvature. Their chances of being diagnosed were related to the number of specimens examined. Extensive sampling of both the lesser and greater curvature is recommended for early diagnosis of dysplastic and/or carcinoid lesions in patients at risk. In contrast, limited sampling in the greater curvature seems to be adequate in patients with no risk for carcinoid development.
- Published
- 2000
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20. Progelatinase A mRNA Expression in Cell Lines Derived from Tumors in Patients with Metastatic Renal Cell Carcinoma Correlates Inversely with Survival
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Walther, M. M., Kleiner, D. E., Lubensky, I. A., Pozzatti, R., Nyguen, T., Gnarra, J. R., Hurley, K., Venzon, D., Linehan, W. M., and Stetler-Stevenson, W. G.
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- 1997
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21. Epididymal Cystadenomas in Von Hippel-Lindau Disease
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Choyke, P. L., Glenn, G. M., Wagner, J. P., Lubensky, I. A., Thakore, K., Zbar, B., Linehan, W. Marston, and Walther, M. M.
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- 1997
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22. The multiple endocrine neoplasia type I gene locus is involved in the pathogenesis of type II gastric carcinoids
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Debelenko, L., Emmert-Buck, M., Zhuang, Z., Epshteyn, E., Moskaluk, C., Jensen, R., Liotta, L., and Lubensky, I.
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BACKGROUND & AIMS: Both gastrin and genetic factors were suggested to underlie the pathogenesis of multiple gastric enterochromaffin-like (ECL) cell carcinoids. To assess the role of genetic alterations in carcinoid tumorigenesis, loss of heterozygosity (LOH) at the locus of the multiple endocrine neoplasia type 1 (MEN-1) gene was studied in gastric carcinoids of patients with MEN-1 and chronic atrophic type A gastritis (A-CAG), as well as in sporadically arising intestinal carcinoids. METHODS: DNA extracted from archival tissue sections of 35 carcinoid tumors was assessed for LOH with eight polymorphic markers on chromosome 11q13. A combined tumor and family study was performed in 1 patient with MEN-1-Zollinger-Ellison syndrome (ZES). RESULTS: LOH at 11q13 loci was detected in 15 of 20 (75%) MEN-1-ZES carcinoids, and each ECL-cell carcinoid with LOH showed deletion of the wild-type allele. Only 1 of 6 A-CAG carcinoids displayed LOH at the MEN-1 gene locus, and none of the 9 intestinal and rectal carcinoids showed 11q13 LOH. CONCLUSIONS: Gastric ECL-cell carcinoid is an independent tumor type of MEN-1 that shares a common developmental mechanism (via inactivation of the MEN-1 gene) with enteropancreatic and parathyroid MEN-1 tumors. Further analysis of sporadic and A-CAG carcinoids is needed to elucidate genetic factors involved in their tumorigenesis. (Gastroenterology 1997 Sep;113(3):773-81)
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- 1997
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23. Detection of von Hippel-Lindau disease gene mutations in paraffin-embedded sporadic renal cell carcinoma specimens
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Zhuang, Z., James Gnarra, Dudley, C. F., Zbar, B., Linehan, W. M., and Lubensky, I. A.
24. A microdissection technique for archival DNA analysis of specific cell populations in lesions <1 mm in size
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Zhuang, Z., Bertheau, P., Emmert-Buck, M. R., Liotta, L. A., James Gnarra, Linehan, W. M., and Lubensky, I. A.
25. Mutations of the MEN1 tumor suppressor gene in pituitary tumors
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Zhuang, Z., Ezzat, S. Z., Vortmeyer, A. O., Weil, R., Oldfield, E. H., Park, W. -S, Pack, S., Huang, S., Agarwal, S. K., Guru, S. C., Manickam, P., Debelenko, L. V., Kester, M. B., Olufemi, S. -E, Heppner, C., Crabtree, J. S., Burns, A. L., Spiegel, A. M., Marx, S. J., Chandrasekharappa, S. C., Collins, F. S., Emmert-Buck, M. R., Liotta, L. A., Sylvia Asa, and Lubensky, I. A.
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Adenoma ,Adult ,Male ,Child, Preschool ,Mutation ,Multiple Endocrine Neoplasia Type 1 ,Humans ,Female ,Genes, Tumor Suppressor ,Pituitary Neoplasms ,Middle Aged ,Aged - Abstract
Although pituitary adenomas are monoclonal proliferations, somatic mutations involving genes that govern cell proliferation or hormone production have been difficult to identify. The genetic etiology of most pituitary tumors, therefore, remains unknown. Pituitary adenomas can develop sporadically or as a part of multiple endocrine neoplasia type 1 (MEN1). Recently, the gene responsible for MEN1 was cloned. To elucidate the potential etiological role of the MEN1 gene in pituitary tumorigenesis, 39 sporadic pituitary adenomas from 38 patients and 1 pituitary adenoma from a familial MEN1 patient were examined for MEN1 gene mutations and allelic deletions. Four of 39 sporadic pituitary adenomas showed a deletion of one copy of the MEN1 gene, and a specific MEN1 gene mutation in the remaining gene copy was detected in 2 of these tumors. The corresponding germ-line sequence was normal in all sporadic cases. A specific MEN1 mutation was detected in a pituitary adenoma and corresponding germ-line DNA in a patient with familial MEN1. An allelic deletion of the remaining copy of the MEN1 gene was also found in the patient's tumor. Genetic alterations of the MEN1 gene represent a candidate pathogenetic mechanism of pituitary tumorigenesis. The data suggest that somatic MEN1 gene mutations and deletions play a causative role in the development of a subgroup of sporadic pituitary adenomas.
26. Proteomic comparison of oligodendrogliomas with and without 1pLOH
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Okamoto, H., Li, J., Gläsker, S., Vortmeyer, A. O., Jaffe, H., Richard Aaron Robison, Bogler, O., Mikkelsen, T., Lubensky, I. A., Oldfield, E. H., Zhuang, Z., Surgical clinical sciences, and Neurosurgery
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Adult ,Male ,brain neoplasms ,Proteome ,Blotting, Western ,Middle Aged ,Research Support, N.I.H., Intramural ,oligodendroglioma ,Neoplasm Proteins ,proteomics ,Research Support, N.I.H., Extramural ,Chromosomes, Human, Pair 1 ,Drug Resistance, Neoplasm ,Journal Article ,Humans ,Electrophoresis, Gel, Two-Dimensional ,Female ,loss of heterozygosity ,Comparative Study ,Aged - Abstract
OBJECTIVE: Chemoresistance is a widespread therapeutic challenge in glial tumors. The molecular basis of chemoresistance is poorly understood, precluding advances in glioma treatment and leaving gliomas among the most lethal tumors. Oligodendrogliomas provide a unique model to study the molecular basis of chemoresistance, as there are two distinct genetic subtypes with significant differences in chemosensitivity. Despite a high morphological similarity, tumors with allelic loss on the short arm of chromosome 1 (1pLOH) are more chemosensitive than those without 1pLOH. METHODS: In order to identify candidate proteins potentially responsible for glioma chemosensitivity, we compared the proteome of four oligodendrogliomas with and five without 1pLOH using comparative proteomic profiling. Proteomic analysis was performed by two-dimensional protein gel electrophoresis and subsequent computerized gel analysis for detection of distinguishing patterns of protein expression. Differentially expressed proteins were identified using Liquid Chromatography/Mass Spectrometry. Differential expression of select proteins was confirmed by Western blotting. RESULTS: We identified seven candidate proteins that are overexpressed in oligodendrogliomas without 1pLOH. Two of these proteins (glyoxalase I and Rho GDP dissociation inhibitor) have previously been shown to enhance chemoresistance in other tumors. In turn, we identified twelve overexpressed proteins in tumors with 1pLOH that have previously been reported to induce chemosensitivity in other forms of human neoplasia. CONCLUSIONS: These identified proteins are potential targets for pharmacological therapy and may also be useful as biomarkers for differentiation of chemoresistant and chemosensitive oligodendroglioma.
27. Allelic deletions of the VHL gene detected in multiple microscopic clear cell renal lesions in von Hippel-Lindau disease patients
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Lubensky, I. A., James Gnarra, Bertheau, P., Walther, M. M., Linehan, W. M., and Zhuang, Z.
28. Somatic mutations of the MEN1 tumor suppressor gene in sporadic gastrinomas and insulinomas
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Zhuang, Z., Vortmeyer, A. O., Svetlana Pack, Huang, S., Pham, T. A., Wang, C., Park, W. -S, Agarwal, S. K., Debelenko, L. V., Kester, M., Guru, S. C., Manickam, P., Olufemi, S. -E, Yu, F., Heppner, C., Crabtree, J. S., Skarulis, M. C., Venzon, D. J., Emmert-Buck, M. R., Spiegel, A. M., Chandrasekharappa, S. C., Collins, F. S., Burns, A. L., Marx, S. J., Jensen, R. T., Liotta, L. A., and Lubensky, I. A.
29. Grading of renal cell carcinoma: Workgroup No. 2. Union Internationale Contre le Cancer and the American Joint Committee on Cancer (AJCC).
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Medeiros, L J, Jones, E C, Aizawa, S, Aldape, H C, Cheville, J C, Goldstein, N S, Lubensky, I A, Ro, J, Shanks, J, Pacelli, A, and Jung, S H
- Published
- 1997
30. Germline PTEN/MMAC1/TEP1mutations and association with gastrointestinal manifestations in Cowden disease
- Author
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Weber, H.C., Marsh, D., Lubensky, I., Lin, A., and Eng, C.
- Published
- 1998
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31. Endoscopic and histopathologic features of gastrointestinal polyps in Cowden's disease
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Weber, H.C., Lubensky, I., Jensen, R.T., Tucker, M., and Lin, A.
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- 1996
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32. Molecular Features of Cancers Exhibiting Exceptional Responses to Treatment.
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Wheeler DA, Takebe N, Hinoue T, Hoadley KA, Cardenas MF, Hamilton AM, Laird PW, Wang L, Johnson A, Dewal N, Miller V, Piñeyro D, Castro de Moura M, Esteller M, Shen H, Zenklusen JC, Tarnuzzer R, McShane LM, Tricoli JV, Williams PM, Lubensky I, O'Sullivan-Coyne G, Kohn EC, Little RF, White J, Malik S, Harris L, Weil C, Chen AP, Karlovich C, Rodgers B, Shankar L, Jacobs P, Nolan T, Hu J, Muzny DM, Doddapaneni H, Korchina V, Gastier-Foster J, Bowen J, Leraas K, Edmondson EF, Doroshow JH, Conley BA, Ivy SP, and Staudt LM
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- Biopsy, Epigenesis, Genetic, Female, Humans, Male, Neoplasms genetics, Neoplasms pathology, Prognosis, Survival Analysis, Treatment Outcome, Tumor Microenvironment, Antineoplastic Agents therapeutic use, Gene Regulatory Networks, Genetic Variation, Genomics methods, Neoplasms drug therapy
- Abstract
A small fraction of cancer patients with advanced disease survive significantly longer than patients with clinically comparable tumors. Molecular mechanisms for exceptional responses to therapy have been identified by genomic analysis of tumor biopsies from individual patients. Here, we analyzed tumor biopsies from an unbiased cohort of 111 exceptional responder patients using multiple platforms to profile genetic and epigenetic aberrations as well as the tumor microenvironment. Integrative analysis uncovered plausible mechanisms for the therapeutic response in nearly a quarter of the patients. The mechanisms were assigned to four broad categories-DNA damage response, intracellular signaling, immune engagement, and genetic alterations characteristic of favorable prognosis-with many tumors falling into multiple categories. These analyses revealed synthetic lethal relationships that may be exploited therapeutically and rare genetic lesions that favor therapeutic success, while also providing a wealth of testable hypotheses regarding oncogenic mechanisms that may influence the response to cancer therapy., Competing Interests: Declaration of Interests P.W.L. is a member of the Scientific Advisory Board for AnchorDX. H.S.’s husband is part of the Scientific Advisory Board for AnchorDX. N.D. is employed by Foundation Medicine and holds Roche stock. A.J. was an employee of and had ownership interest in Foundation Medicine. V.M. was an employee of and had ownership interest in Foundation Medicine (through 12/31/2019) and is an equity shareholder of Mirati Therapeutics, Inc; on the Board of Directors, compensated by and an equity shareholder of Revolution Medicines, Inc.; a part-time employee and equity shareholder of EqRx (since March 2020); and holds patents with the USPO: 8501413, 8067175 (held by Sloan-Kettering Institute for Cancer Research and licensed to Molecular MD). All other authors declare no competing interests., (Published by Elsevier Inc.)
- Published
- 2021
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33. The Exceptional Responders Initiative: Feasibility of a National Cancer Institute Pilot Study.
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Conley BA, Staudt L, Takebe N, Wheeler DA, Wang L, Cardenas MF, Korchina V, Zenklusen JC, McShane LM, Tricoli JV, Williams PM, Lubensky I, O'Sullivan-Coyne G, Kohn E, Little RF, White J, Malik S, Harris LN, Mann B, Weil C, Tarnuzzer R, Karlovich C, Rodgers B, Shankar L, Jacobs PM, Nolan T, Berryman SM, Gastier-Foster J, Bowen J, Leraas K, Shen H, Laird PW, Esteller M, Miller V, Johnson A, Edmondson EF, Giordano TJ, Kim B, and Ivy SP
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- Adult, Aged, Aged, 80 and over, Feasibility Studies, Female, High-Throughput Nucleotide Sequencing, Humans, Male, Middle Aged, Mutation genetics, National Cancer Institute (U.S.), Neoplasms epidemiology, Neoplasms pathology, Pilot Projects, Precision Medicine, Retrospective Studies, Sequence Analysis, RNA, United States epidemiology, Exome Sequencing, Neoplasms drug therapy, Neoplasms genetics, Transcriptome genetics
- Abstract
Background: Tumor molecular profiling from patients experiencing exceptional responses to systemic therapy may provide insights into cancer biology and improve treatment tailoring. This pilot study evaluates the feasibility of identifying exceptional responders retrospectively, obtaining pre-exceptional response treatment tumor tissues, and analyzing them with state-of-the-art molecular analysis tools to identify potential molecular explanations for responses., Methods: Exceptional response was defined as partial (PR) or complete (CR) response to a systemic treatment with population PR or CR rate less than 10% or an unusually long response (eg, duration >3 times published median). Cases proposed by patients' clinicians were reviewed by clinical and translational experts. Tumor and normal tissue (if possible) were profiled with whole exome sequencing and, if possible, targeted deep sequencing, RNA sequencing, methylation arrays, and immunohistochemistry. Potential germline mutations were tracked for relevance to disease., Results: Cases reflected a variety of tumors and standard and investigational treatments. Of 520 cases, 476 (91.5%) were accepted for further review, and 222 of 476 (46.6%) proposed cases met requirements as exceptional responders. Clinical data were obtained from 168 of 222 cases (75.7%). Tumor was provided from 130 of 168 cases (77.4%). Of 117 of the 130 (90.0%) cases with sufficient nucleic acids, 109 (93.2%) were successfully analyzed; 6 patients had potentially actionable germline mutations., Conclusion: Exceptional responses occur with standard and investigational treatment. Retrospective identification of exceptional responders, accessioning, and sequencing of pretreatment archived tissue is feasible. Data from molecular analyses of tumors, particularly when combining results from patients who received similar treatments, may elucidate molecular bases for exceptional responses., (Published by Oxford University Press 2020. This work is written by US Government employees and is in the public domain in the US.)
- Published
- 2021
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34. Toward Improving Practices for Submission of Diagnostic Tissue Blocks for National Cancer Institute Clinical Trials.
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Makhlouf H, Watson MA, Lankes HA, Weil C, Dickler M, Birrer M, Moskaluk C, Ramirez NC, Okby N, Alonsozana E, Barnes M, Goldman EB, Enos R, and Lubensky I
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- Humans, National Cancer Institute (U.S.), Paraffin Embedding, Tissue Fixation, United States, Clinical Trials as Topic, Histological Techniques, Specimen Handling
- Abstract
Objectives: The National Cancer Institute (NCI) National Clinical Trials Network performs phase II and III clinical trials, which increasingly rely on the submission of diagnostic formalin-fixed, paraffin-embedded tissue blocks for biomarker assessment. Simultaneously, advances in precision oncology require that clinical centers maintain diagnostic specimens for ancillary, standard-of-care diagnostics. This has caused tissue blocks to become a limited resource for advancing the NCI clinical trial enterprise and the practice of modern molecular pathology., Methods: The NCI convened a 1-day workshop of multidisciplined experts to discuss barriers and strategic solutions to facilitate diagnostic block submission for clinical trial science, from the perspective of patient advocates, legal experts, pathologists, and clinical oncologists., Results: The expert views and opinions were carefully noted and reported., Conclusions: Recommendations were proposed to reduce institutional barriers and to assist organizations in developing clear policies regarding diagnostic block submission for clinical trials., (© American Society for Clinical Pathology, 2019.)
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- 2020
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35. The effects of frozen tissue storage conditions on the integrity of RNA and protein.
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Auer H, Mobley JA, Ayers LW, Bowen J, Chuaqui RF, Johnson LA, Livolsi VA, Lubensky IA, McGarvey D, Monovich LC, Moskaluk CA, Rumpel CA, Sexton KC, Washington MK, Wiles KR, Grizzle WE, and Ramirez NC
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- Cold Temperature, Gene Expression Profiling, Humans, Microarray Analysis, Neoplasms pathology, Proteomics methods, RNA, Messenger chemistry, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Freezing, Proteins chemistry, RNA chemistry, Tissue Preservation methods
- Abstract
Unfixed tissue specimens most frequently are stored for long term research uses at either -80° C or in vapor phase liquid nitrogen (VPLN). There is little information concerning the effects such long term storage on tissue RNA or protein available for extraction. Aliquots of 49 specimens were stored for 5-12 years at -80° C or in VPLN. Twelve additional paired specimens were stored for 1 year under identical conditions. RNA was isolated from all tissues and assessed for RNA yield, total RNA integrity and mRNA integrity. Protein stability was analyzed by surface-enhanced or matrix-assisted laser desorption ionization time of flight mass spectrometry (SELDI-TOF-MS, MALDI-TOF-MS) and nano-liquid chromatography electrospray ionization tandem mass spectrometry (nLC-ESI-MS/MS). RNA yield and total RNA integrity showed significantly better results for -80° C storage compared to VPLN storage; the transcripts that were preferentially degraded during VPLN storage were these involved in antigen presentation and processing. No consistent differences were found in the SELDI-TOF-MS, MALDI-TOF-MS or nLC-ESI-MS/MS analyses of specimens stored for more than 8 years at -80° C compared to those stored in VPLN. Long term storage of human research tissues at -80° C provides at least the same quality of RNA and protein as storage in VPLN.
- Published
- 2014
- Full Text
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36. Low-cost technologies for medical diagnostics in low-resource settings.
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Balsam J, Ossandon M, Bruck HA, Lubensky I, and Rasooly A
- Subjects
- Cell Phone, Clinical Laboratory Techniques instrumentation, Humans, Internet, Photography, Clinical Laboratory Techniques economics, Clinical Laboratory Techniques methods, Developing Countries economics, Health Resources economics
- Abstract
Introduction: Medical diagnostics is a critical element of effective medical treatment. However, many modern and emerging diagnostic technologies are not affordable or compatible with the needs and conditions found in low- and middle-income countries. Resource-poor countries require low-cost, robust, easy-to-use, and portable diagnostic devices compatible with telemedicine that can be adapted to meet diverse medical needs., Areas Covered: The most suitable devices are likely those that will be based on optical technologies, which are used for many types of biological analyses. This manuscript describes several prototypes of low-cost optical technologies and their application developed at the FDA's Office of Science and Engineering laboratories including a webcam-based multiwavelength fluorescence plate reader, a webcam-based fluorescence microscope demonstrated for colonic mucosa tissue pathology analysis, a lens-free optical detector used for the detection of Botulinum A neurotoxin activity, and a lab-on-a-chip which enables the performance of enzyme-linked immunosorbent assay and other immunological or enzymatic assays without the need of dedicated laboratories and complex equipment demonstrated for the detection of the toxin staphylococcal enterotoxin B., Expert Opinion: Sensitive and effective optical detection devices can be developed using readily available consumer electronics components such as webcams, charge-coupled device cameras, and LEDs. There are challenges in developing devices with sufficient sensitivity and specificity. Several optical and computational approaches were developed to overcome these challenges to create optical detectors that can serve as low-cost medical diagnostics in resource-poor settings.
- Published
- 2013
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37. Multifocal microcysts and papillary cystadenoma of the lung in von Hippel-Lindau disease.
- Author
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Klein J, Zhuang Z, Lubensky I, Colby TV, Martinez F Jr, and Leslie KO
- Subjects
- Adult, Biomarkers, Tumor analysis, Cystadenoma, Papillary chemistry, Cystadenoma, Papillary genetics, Cystadenoma, Papillary surgery, Cysts genetics, DNA Mutational Analysis, Female, Gene Deletion, Humans, Lung Neoplasms chemistry, Lung Neoplasms genetics, Lung Neoplasms surgery, Radiography, Thoracic, Tomography, X-Ray Computed, Von Hippel-Lindau Tumor Suppressor Protein genetics, von Hippel-Lindau Disease genetics, Cystadenoma, Papillary pathology, Cysts pathology, Lung Neoplasms pathology, von Hippel-Lindau Disease pathology
- Abstract
von Hippel-Lindau disease is an autosomal dominant inherited disorder characterized by a predisposition to multiple neoplasms. Renal cell carcinoma and hemangioblastomas of the retina and cerebellum are the most common of these, but other neoplasms and cysts also occur throughout the body. We report a distinctive, yet never described lung lesion in a 43-year-old woman with von Hippel-Lindau disease. Molecular genetic studies confirmed the presence of a VHL gene mutation in the cells of this lesion. We discuss the salient features of this novel lesion, and hypothesize on its origin and nature.
- Published
- 2007
- Full Text
- View/download PDF
38. Proteomic profiling of von Hippel-Lindau syndrome and multiple endocrine neoplasia type 2 pheochromocytomas reveals different expression of chromogranin B.
- Author
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Brouwers FM, Gläsker S, Nave AF, Vortmeyer AO, Lubensky I, Huang S, Abu-Asab MS, Eisenhofer G, Weil RJ, Park DM, Linehan WM, Pacak K, and Zhuang Z
- Subjects
- Adolescent, Adrenal Gland Neoplasms pathology, Adult, Catecholamines metabolism, Child, Female, Humans, Male, Middle Aged, Multiple Endocrine Neoplasia Type 2a pathology, Pheochromocytoma pathology, Protein Array Analysis, Proteomics, von Hippel-Lindau Disease pathology, Adrenal Gland Neoplasms metabolism, Chromogranin B metabolism, Multiple Endocrine Neoplasia Type 2a metabolism, Pheochromocytoma metabolism, von Hippel-Lindau Disease metabolism
- Abstract
Pheochromocytomas are catecholamine-producing tumors that can occur in the context of von Hippel-Lindau syndrome (VHL) and multiple endocrine neoplasia type 2 (MEN2). Pheochromocytomas in these two syndromes differ in histopathological features, catecholamine metabolism, and clinical phenotype. To further investigate the nature of these differences, we compared the global protein expressions of 8 MEN2A-associated pheochromocytomas with 11 VHL-associated pheochromocytomas by two-dimensional gel electrophoresis proteomic profiling followed by sequencing and identification of differentially expressed proteins. Although both types of pheochromocytoma shared similarities in their protein expression patterns, the expression of several proteins was distinctly different between VHL- and MEN2A-associated pheochromocytomas. We identified several of these differentially expressed proteins. One of the proteins with higher expression in MEN2-associated tumors was chromogranin B, of which the differential expression was confirmed by western blot analysis. Our results expand the evidence for proteomic differences between these two tumor entities, and suggest that VHL-associated pheochromocytomas may be deficient in fundamental machinery for catecholamine storage. In light of these new findings, as well as existing evidence for differences between both types of pheochromocytomas, we propose that these tumors may have different developmental origins.
- Published
- 2007
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39. N-CoR pathway targeting induces glioblastoma derived cancer stem cell differentiation.
- Author
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Park DM, Li J, Okamoto H, Akeju O, Kim SH, Lubensky I, Vortmeyer A, Dambrosia J, Weil RJ, Oldfield EH, Park JK, and Zhuang Z
- Subjects
- Biomarkers analysis, Brain Neoplasms metabolism, Cell Differentiation drug effects, Cell Proliferation drug effects, Drug Synergism, Humans, Neoplastic Stem Cells metabolism, Nuclear Proteins analysis, Nuclear Proteins metabolism, Nuclear Receptor Co-Repressor 1, Okadaic Acid administration & dosage, Okadaic Acid pharmacology, Phosphorylation, Protein Transport, Repressor Proteins analysis, Repressor Proteins metabolism, Signal Transduction drug effects, Tretinoin pharmacology, Tumor Cells, Cultured, Brain Neoplasms pathology, Glioblastoma pathology, Neoplastic Stem Cells pathology, Nuclear Proteins physiology, Repressor Proteins physiology
- Abstract
Nuclear receptor corepressor (N-CoR) is a critical regulator of neural stem cell differentiation. Nuclear localization of N-CoR is a feature of undifferentiated neural stem cells and cytoplasmic translocation of N-CoR leads to astrocytic differentiation. Comparative proteomic analysis of microdissected glioblastoma multiforme (GBM) specimens and matched normal glial tissue reveals increased expression of N-CoR in GBM. In GBM primary cell cultures, tumor cells with nuclear localization of N-CoR demonstrate an undifferentiated phenotype, but are subject to astroglial differentiation upon exposure to agents promoting phosphorylation of N-CoR and its subsequent translocation to the cytoplasm. Treatment of glioma cell lines with a combination of retinoic acid and low-dose okadaic acid decreases the corepressor effect of N-CoR and has a striking synergistic effect on growth inhibition. The identification of N-CoR in GBM provides insights into the tumorigenesis process and supports the development of differentiation-based therapeutic strategies.
- Published
- 2007
- Full Text
- View/download PDF
40. Non-islet origin of pancreatic islet cell tumors.
- Author
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Vortmeyer AO, Huang S, Lubensky I, and Zhuang Z
- Subjects
- Adenoma, Islet Cell pathology, Alleles, Cell Differentiation, Germ-Line Mutation, Humans, Pancreas metabolism, Pancreas pathology, Pancreatic Neoplasms pathology, Pluripotent Stem Cells metabolism, Pluripotent Stem Cells pathology, Precancerous Conditions pathology, Adenoma, Islet Cell etiology, Multiple Endocrine Neoplasia Type 1 complications, Multiple Endocrine Neoplasia Type 1 genetics, Pancreatic Neoplasms etiology, Pancreatic Neoplasms genetics, Proto-Oncogene Proteins genetics
- Abstract
The histogenesis of pancreatic islet cell tumors was investigated by morphological identification of putative precursor lesions in pancreatic tissue from patients with multiple endocrine neoplasia type 1 (MEN1), tissue microdissection, and genetic analysis. MEN1 mutation and absence of the MEN1 wild-type allele in different precursor lesions strongly suggest that pancreatic islet cell tumors are derived from the ductal/acinar system but not from pancreatic islet tissue. Pluripotent cells within the exocrine pancreas appear capable of formation into small atypical accumulations of MEN1-deficient cells with both exocrine and endocrine phenotype. The findings suggest presence of multiple developmental aberrations in MEN1 pancreas that potentially serve as precursor material for neuroendocrine tumors.
- Published
- 2004
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- View/download PDF
41. Combination interleukin-2 and interleukin-12 induces severe gastrointestinal toxicity and epithelial cell apoptosis in mice.
- Author
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Kaufman HL, Swartout BG, Hörig H, and Lubensky I
- Subjects
- Animals, Apoptosis, Epithelial Cells drug effects, Epithelial Cells pathology, Female, Immunohistochemistry, Interleukin-12 pharmacology, Interleukin-2 pharmacology, Intestinal Mucosa pathology, Liver metabolism, Liver pathology, Mice, Mice, Inbred BALB C, Recombinant Proteins metabolism, Recombinant Proteins pharmacology, Time Factors, Digestive System drug effects, Epithelial Cells metabolism, Interleukin-12 toxicity, Interleukin-2 toxicity
- Abstract
Interleukin 2 (IL-2) and interleukin 12 (IL-12) have potent anti-tumour activity as single agent therapy against several different murine and human tumours. Combining these cytokines may result in improved therapeutic effectiveness, however, the toxicity associated with simultaneous administration is prohibitive. This study was designed to determine the specific histopathologic changes associated with combination therapy. Mice were treated with 5 days of interleukin-2, interleukin-12, or both using standard doses and schedules. Histologic specimens were prepared from all internal organs on a daily basis to identify specific pathologic abnormalities. Treatment with interleukin-2, interleukin-12, or both resulted in pathologic insult to the liver and gastrointestinal tract. Mild lymphoplasmacytic infiltrates were seen in the liver. The most significant pathology was seen in the large bowel and consisted of apoptosis of colonic epithelial cells. While recovery of injured gastrointestinal mucosa occurred in mice treated with interleukin-2 or interleukin-12 alone, combination therapy resulted in death before recovery was possible. Combination interleukin-2 and interleukin-12 therapy results in irreversible injury of the colon as manifested by increased epithelial cell apoptosis and death in mice. Understanding the pathologic changes associated with combination cytokine therapy may lead to strategies that prevent toxicity while maintaining therapeutic effects., (Copyright 2002 Elsevier Science Ltd.)
- Published
- 2002
- Full Text
- View/download PDF
42. Multiple leiomyomas of the esophagus, lung, and uterus in multiple endocrine neoplasia type 1.
- Author
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McKeeby JL, Li X, Zhuang Z, Vortmeyer AO, Huang S, Pirner M, Skarulis MC, James-Newton L, Marx SJ, and Lubensky IA
- Subjects
- Adult, Chromosome Mapping, Chromosomes, Human, Pair 11 genetics, Female, Gene Silencing, Humans, Loss of Heterozygosity, Middle Aged, X Chromosome genetics, Esophageal Neoplasms genetics, Leiomyomatosis genetics, Lung Neoplasms genetics, Multiple Endocrine Neoplasia Type 1 genetics, Uterine Neoplasms genetics
- Abstract
Multiple endocrine neoplasia type 1 (MEN1) is an autosomal dominant hereditary disorder characterized by multiple parathyroid, pancreatic, duodenal, and pituitary neuroendocrine tumors. Nonendocrine mesenchymal tumors, such as lipomas, collagenomas, and angiofibromas have also been reported. MEN1-associated neuroendocrine and some mesenchymal tumors have documented MEN1 gene alterations on chromosome 11q13. To test whether the MEN1 gene is involved in the pathogenesis of multiple smooth muscle tumors, we examined the 11q13 loss of heterozygosity (LOH) and clonality patterns in 15 leiomyomata of the esophagus, lung, and uterus from five patients with MEN1. Forty sporadic uterine leiomyomata were also studied for 11q13 LOH. LOH analysis was performed using four polymorphic DNA markers at the MEN1 gene locus; D11S480, PYGM, D11S449, and INT-2. 11q13 LOH was detected in 10 of 12 (83%) MEN1-associated esophageal and uterine smooth muscle tumors. In contrast, LOH at the MEN1 gene locus was demonstrated only in 2 of 40 (5%) sporadic uterine tumors. LOH at 11q13 was not documented in three lung smooth muscle tumors from a single patient with MEN1. Ten tumors from two female patients were additionally assessed for clonality by X-chromosome inactivation analysis. The results demonstrated different clonality patterns in multiple tumors in the same organ in each individual patient. The data indicate that leiomyomata of the esophagus and uterus in MEN1 patients arise as independent clones, develop through MEN1 gene alterations, and are an integral part of MEN1. However, the MEN1 gene is not a significant contributor to the tumorigenesis of sporadic uterine leiomyomata.
- Published
- 2001
- Full Text
- View/download PDF
43. Pituitary macroadenoma in a 5-year-old: an early expression of multiple endocrine neoplasia type 1.
- Author
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Stratakis CA, Schussheim DH, Freedman SM, Keil MF, Pack SD, Agarwal SK, Skarulis MC, Weil RJ, Lubensky IA, Zhuang Z, Oldfield EH, and Marx SJ
- Subjects
- Adenoma pathology, Alleles, Child, Preschool, DNA genetics, DNA isolation & purification, DNA Mutational Analysis, Gene Deletion, Humans, In Situ Hybridization, Fluorescence, Male, Multiple Endocrine Neoplasia Type 1 pathology, Pituitary Neoplasms pathology, Point Mutation genetics, Adenoma genetics, Multiple Endocrine Neoplasia Type 1 genetics, Pituitary Neoplasms genetics
- Abstract
Multiple endocrine neoplasia type 1 (MEN 1) is associated with parathyroid, enteropancreatic, pituitary, and other tumors. The MEN1 gene, a tumor suppressor, is located on chromosome 11. Affected individuals inherit a mutated MEN1 allele, and tumorigenesis in specific tissues follows inactivation of the remaining MEN1 allele. MEN 1-associated endocrine tumors usually become clinically evident in late adolescence or young adulthood, as high levels of PTH, gastrin, or PRL. Because each of these tumors can usually be controlled with medications and/or surgery, MEN 1 has been regarded mainly as a treatable endocrinopathy of adults. Unlike in MEN 2, early testing of children in MEN 1 families is not recommended. We report a 2.3-cm pituitary macroadenoma in a 5-yr-old boy with familial MEN 1. He presented with growth acceleration, acromegaloid features, and hyperprolactinemia. We tested systematically to see whether his pituitary tumor had causes similar to or different from a typical MEN 1 tumor. Germ line DNA of the propositus and his affected relatives revealed a heterozygous point mutation in the MEN1 gene, which leads to a His139Asp (H139D) amino acid substitution. The patient had no other detectable germ-line mutations on either MEN1 allele. DNA sequencing and fluorescent in situ hybridization with a MEN1 genomic DNA sequence probe each demonstrated one copy of the MEN1 gene to be deleted in the pituitary tumor and not in normal DNA, proving MEN1 "second hit" as a tumor cause. Gsalpha mutation, common in nonhereditary GH-producing tumors, was not detected in this tumor. We conclude that this pituitary macroadenoma showed molecular genetic features of a typical MEN 1-associated tumor. This patient represents the earliest presentation of any morbid endocrine tumor in MEN 1. A better understanding of early onset MEN 1 disease is needed to formulate recommendations for early MEN 1 genetic testing.
- Published
- 2000
- Full Text
- View/download PDF
44. Clinical and genetic analysis of patients with pancreatic neuroendocrine tumors associated with von Hippel-Lindau disease.
- Author
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Libutti SK, Choyke PL, Alexander HR, Glenn G, Bartlett DL, Zbar B, Lubensky I, McKee SA, Maher ER, Linehan WM, and Walther MM
- Subjects
- Adolescent, Adult, Aged, Female, Humans, Male, Middle Aged, Neuroendocrine Tumors complications, Neuroendocrine Tumors genetics, Pancreatic Neoplasms complications, Pancreatic Neoplasms genetics, Prospective Studies, Proteins genetics, Tomography, X-Ray Computed, Von Hippel-Lindau Tumor Suppressor Protein, von Hippel-Lindau Disease complications, von Hippel-Lindau Disease genetics, Ligases, Neuroendocrine Tumors surgery, Pancreatic Neoplasms surgery, Tumor Suppressor Proteins, Ubiquitin-Protein Ligases, von Hippel-Lindau Disease surgery
- Abstract
Background: Patients with von Hippel-Lindau disease (VHL) may develop pancreatic neuroendocrine tumors (PNETs), which can behave in a malignant fashion. We prospectively evaluated size criteria for resection of lesions and the role of genotype/phenotype analysis of germline VHL mutations in predicting clinical course., Methods: From December 1988 through December 1999 we screened 389 patients with VHL. The diagnosis of PNET was made by pathologic analysis of tissues or by radiographic appearance. Germline mutations were determined by quantitative Southern blotting, fluorescence in situ hybridization and complete gene sequencing., Results: Forty-four patients with PNETs have been identified; 25 have undergone surgical resection, 5 had metastatic disease, and 14 are being monitored. No patient who has undergone resection based on tumor size criteria has developed metastases. Patients with PNETs were more likely to have missense mutations (58%), and 4 of 5 patients (80%) with metastatic disease had mutations in exon 3 compared with 18 of 39 (46%) patients without metastatic disease., Conclusions: Imaging for detection and surgical resection based on size criteria have resulted in the successful management of VHL patients with PNETs. Analysis of germline mutations may help identify patients at risk for PNET and which patients may benefit from surgical intervention.
- Published
- 2000
- Full Text
- View/download PDF
45. Duplication of the mutant RET allele in trisomy 10 or loss of the wild-type allele in multiple endocrine neoplasia type 2-associated pheochromocytomas.
- Author
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Huang SC, Koch CA, Vortmeyer AO, Pack SD, Lichtenauer UD, Mannan P, Lubensky IA, Chrousos GP, Gagel RF, Pacak K, and Zhuang Z
- Subjects
- Alleles, DNA, Neoplasm blood, DNA, Neoplasm genetics, Gene Expression Regulation, Neoplastic, Germ-Line Mutation, Humans, In Situ Hybridization, Fluorescence, Proto-Oncogene Mas, Proto-Oncogene Proteins c-ret, Adrenal Gland Neoplasms genetics, Chromosomes, Human, Pair 10, Drosophila Proteins, Loss of Heterozygosity, Multiple Endocrine Neoplasia Type 2a genetics, Pheochromocytoma genetics, Proto-Oncogene Proteins genetics, Receptor Protein-Tyrosine Kinases genetics, Trisomy
- Abstract
Inherited mutations of the RET proto-oncogene are tumorigenic in patients with multiple endocrine neoplasia type 2 (MEN 2). However, it is not understood why only few of the affected cells in the target organs develop into tumors. Genetic analysis of nine pheochromocytomas from five unrelated patients with MEN 2 showed either duplication of the mutant RET allele in trisomy 10 or loss of the wild-type RET allele. Our results suggest a "second hit" causing a dominant effect of the mutant RET allele, through either duplication of the mutant allele or loss of the wild-type allele, as a possible mechanism for pheochromocytoma tumorigenesis in patients with MEN 2.
- Published
- 2000
46. Histopathology and molecular genetics of multiple cysts and microcystic (serous) adenomas of the pancreas in von Hippel-Lindau patients.
- Author
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Mohr VH, Vortmeyer AO, Zhuang Z, Libutti SK, Walther MM, Choyke PL, Zbar B, Linehan WM, and Lubensky IA
- Subjects
- Adenoma genetics, Adult, Aged, Cysts genetics, DNA, Neoplasm genetics, Female, Humans, Loss of Heterozygosity, Male, Middle Aged, Molecular Biology methods, Pancreatic Diseases genetics, Pancreatic Neoplasms genetics, Adenoma pathology, Cysts pathology, Pancreatic Diseases pathology, Pancreatic Neoplasms pathology, von Hippel-Lindau Disease genetics, von Hippel-Lindau Disease pathology
- Abstract
Microcystic adenoma and cysts of the pancreas occur sporadically or as a part of von Hippel-Lindau (VHL) disease. The pathology of pancreatic cystic disease in VHL patients has not been well characterized. Furthermore, it is presently unknown whether the alteration of the VHL gene is responsible for the development of the entire spectrum of pancreatic serous cystic lesions. We performed a histopathological analysis of 21 cysts and 98 microcystic adenomas in nine VHL patients with a known germline mutation. In addition, PCR-amplified DNA from 27 pancreatic cystic lesions in three informative patients was studied for allelic deletions with polymorphic markers spanning the VHL gene locus. In all patients, pancreatic lesions were multiple: 21 benign serous cysts, 63 microscopic microcystic adenomas (size <0.4 cm), and 35 macroscopic microcystic adenomas (size >0.5 cm). The average number of lesions per patient was 2.1 benign cysts (range, 0-8), 7.7 (1-37) microscopic microcystic adenomas, and 3 (0-21) macroscopic microcystic adenomas. All lesions showed similar histology and contained prominent fibrous stroma, clear and/or amphophilic, glycogen-rich epithelial cells, endothelial and smooth muscle cells. VHL deletions were detected in all types of pancreatic cystic lesions. The presence of VHL gene allelic deletions in the spectrum of multifocal pancreatic cystic lesions provides direct molecular evidence of their neoplastic nature and integral association with VHL disease. The histopathological and molecular data establish a serous cyst-microcystic adenoma continuum in the development of pancreatic cystic neoplasia in VHL disease.
- Published
- 2000
- Full Text
- View/download PDF
47. Alterations in the p16INK4a/CDKN2A tumor suppressor gene in gastrinomas.
- Author
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Serrano J, Goebel SU, Peghini PL, Lubensky IA, Gibril F, and Jensen RT
- Subjects
- Adolescent, Adult, Cyclin-Dependent Kinase Inhibitor p16, DNA Methylation, Duodenal Neoplasms pathology, Duodenal Neoplasms surgery, Exons, Female, Follow-Up Studies, Gastrinoma diagnostic imaging, Gastrinoma pathology, Gastrinoma surgery, Gastrins blood, Humans, Lymphatic Metastasis, Male, Middle Aged, Neoplasms, Unknown Primary genetics, Neoplasms, Unknown Primary pathology, Neoplasms, Unknown Primary surgery, Pancreatic Neoplasms pathology, Pancreatic Neoplasms surgery, Radionuclide Imaging, Time Factors, Tumor Cells, Cultured, Carrier Proteins genetics, Duodenal Neoplasms genetics, Gastrinoma genetics, Genes, Tumor Suppressor, Mutation, Pancreatic Neoplasms genetics, Polymorphism, Genetic
- Abstract
The p16INK4a/CDKN2A gene (p16INK4a) is frequently altered by homozygous deletion, mutation, or methylation in many nonendocrine tumors, and these alterations may be predictive of recurrence, tumor growth, or aggressiveness. Whether this is true of neuroendocrine tumors such as gastrinomas is unclear. To address this question we analyzed the gastrinomas from 44 patients for p16INK4a gene mutations and correlated the results to the tumor's biological behavior, growth pattern, and aggressiveness. No gastrinomas had mutations of exon 1 or exon 2 of the p16INK4a gene, although polymorphisms were found in 54%. No homozygous deletions were found. In 52% of the gastrinomas, hypermethylation of a 5'-CpG island of the p16INK4a gene promoter was found. To assess the growth behavior of the gastrinomas, all patients were assessed yearly with at least three conventional imaging studies (computed tomography scan, magnetic resonance imaging, and ultrasound), and since 1994 have been assessed with radionuclide scanning using [111In-diethylenetriamine pentaacetic acid,DPhe1]octreotide. The mean follow-up was 5.1+/-0.4 yr (range, 1.2-11.7). The presence or absence of methylation of the p16INK4a gene did not correlate with clinical characteristics of the gastrinoma, biological behavior (gastrin release and basal or maximal acid output), the presence or absence of known prognostic factors (tumor size, gastrinoma location, lymph node metastases, liver metastases, and curability), or growth pattern of the gastrinoma postresection. These results indicate that methylation of the p16INK4a gene is the most common gene alteration described to date in gastrinomas. Furthermore, because it is independent of disease stage it is probably an early event in the pathogenesis and because it is independent of the primary gastrinoma location, which is now thought to have different origins, methylation of the p16INK4a gene is probably a central process in the molecular pathogenesis of these tumors.
- Published
- 2000
- Full Text
- View/download PDF
48. Ability of somatostatin receptor scintigraphy to identify patients with gastric carcinoids: a prospective study.
- Author
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Gibril F, Reynolds JC, Lubensky IA, Roy PK, Peghini PL, Doppman JL, and Jensen RT
- Subjects
- Carcinoid Tumor metabolism, Case-Control Studies, Female, Humans, Indium Radioisotopes, Male, Middle Aged, Multiple Endocrine Neoplasia Type 1 diagnostic imaging, Octreotide analogs & derivatives, Pentetic Acid analogs & derivatives, Predictive Value of Tests, Prospective Studies, Radiopharmaceuticals, Sensitivity and Specificity, Stomach Neoplasms metabolism, Zollinger-Ellison Syndrome diagnostic imaging, Carcinoid Tumor diagnostic imaging, Receptors, Somatostatin metabolism, Stomach Neoplasms diagnostic imaging, Tomography, Emission-Computed, Single-Photon
- Abstract
Unlabelled: Gastric carcinoids are of increasing clinical concern because they may develop in hypergastrinemic states, especially with the increased chronic use of potent acid suppressants that can cause hypergastrinemia. However, gastric carcinoids are difficult to diagnose. Somatostatin receptor scintigraphy (SRS) has a high sensitivity and specificity for localizing carcinoids in other locations. The purpose of this study was to determine whether SRS could localize gastric carcinoids., Methods: Two groups of patients with Zollinger-Ellison syndrome (ZES) with hypergastrinemia, each having a different increased risk of developing gastric carcinoids, were studied. One hundred sixty-two consecutive patients with ZES were studied prospectively, with 39 having multiple endocrine neoplasia, type 1 (MEN-1) (high increased risk), and 123 not having MEN-1 (low increased risk). Patients were admitted to the hospital initially and then yearly, undergoing SRS with SPECT, upper gastrointestinal endoscopy, and Jumbo Cup biopsies of any gastric abnormalities, as well as random biopsies of the gastric body. Tumor localization studies were also performed. Both the results of the routine SRS interpretation and the results of a masked review, with particular attention to the stomach of high risk MEN-1 patients, were correlated with the gastric biopsy results., Results: Gastric SRS localization was positive in 19 (12%) of 162 patients. Sixteen patients had a gastric carcinoid, and 12 of these patients had SRS localization. The sensitivity of SRS in localizing a gastric carcinoid was 75%, with a specificity of 95%. Positive and negative predictive values were 63% and 97%, respectively., Conclusion: SRS is a noninvasive method that can identify patients with gastric carcinoids with a reasonable sensitivity and a high specificity. SRS should prove useful in the treatment of patients with hypergastrinemic states that have an increased incidence of gastric carcinoids. In patients with MEN-1, one must realize that localization in the upper abdomen on SRS may be caused by a gastric carcinoid and not a pancreatic endocrine tumor.
- Published
- 2000
49. Survey of genetic alterations in gastrinomas.
- Author
-
Yu F, Jensen RT, Lubensky IA, Mahlamaki EH, Zheng YL, Herr AM, and Ferrin LJ
- Subjects
- Allelic Imbalance, Aneuploidy, Chromosome Aberrations, Chromosomes, Human, Pair 1, Chromosomes, Human, Pair 11, Chromosomes, Human, Pair 5, DNA, Neoplasm analysis, DNA, Neoplasm genetics, Duodenal Neoplasms pathology, Genome, Human, Humans, Lymphatic Metastasis, Microsatellite Repeats, Nucleic Acid Hybridization, Pancreatic Neoplasms pathology, Polymerase Chain Reaction, Duodenal Neoplasms genetics, Gastrinoma genetics, Pancreatic Neoplasms genetics
- Abstract
Gastrinomas are rare gastrin-secreting endocrine tumors that usually arise in the duodenum or pancreas and, if untreated, can cause severe peptic ulcers or metastatic disease. Although most tumors are sporadic they are especially common in patients with multiple endocrine neoplasia type 1 (MEN1), and most studies of these tumors have focused on the role of the MEN1 gene. Although the gene is commonly altered in sporadic tumors, this finding is not universal, and it is highly likely that other genetic defects play a significant role. In the present study, an in-depth analysis of the DNA of eight tumors was carried out in an effort to localize these areas. The experiments consisted of an analysis of 400 microsatellite marker loci distributed evenly throughout the human genome, and the results were confirmed with comparative genomic hybridization. Whereas deletions encompassing the MEN1 gene were seen in two tumors, the most striking result was multiple large rearrangements on chromosome 1 in two of the tumors with hepatic metastases. In several instances, an individual tumor had abnormalities of every informative maker on a given chromosome, presumably as a result of aneuploidy affecting that chromosome. Such defects were only seen in the four large or aggressive tumors, and the total number of chromosomes affected in a tumor ranged from 1 to a high of 13 in a patient who had an unusually aggressive tumor This tumor also showed microsatellite instability, and this is the first report of such a defect in gastrinomas. This study implicates chromosome 1 defects, aneuploidy, and perhaps mismatch repair defects as importan features of gastrinomas; deletions involving the MEN1 gene were con firmed, but the rest of the genome was free of large deletions or amplifications.
- Published
- 2000
50. A phase 2 study of radio frequency interstitial tissue ablation of localized renal tumors.
- Author
-
Walther MC, Shawker TH, Libutti SK, Lubensky I, Choyke PL, Venzon D, and Linehan WM
- Subjects
- Adult, Female, Humans, Male, Diathermy, Kidney Neoplasms therapy
- Abstract
Purpose: Small renal tumors are frequently detected during the screening of patients with a hereditary type of renal cancer. The development of nonsurgical treatment modalities would greatly improve quality of life in these patients. We present our experience with radio frequency interstitial tissue ablation, a heating device approved by the Food and Drug Administration for treating soft tissue tumors., Materials and Methods: Patients underwent radio frequency interstitial tissue ablation of small renal tumors just before surgical excision. Pathological examination of the renal tumors was done to evaluate the treatment effect. Computerized tomography and renal function testing were performed before and after therapy to evaluate toxicity., Results: Four patients underwent treatment of a total of 14 tumors with the radio frequency interstitial tissue ablation device just before surgical removal of the tumors. All lesions were brown after ablation, in contrast to the normal pink appearance of untreated lesions that were resected. On color Doppler ultrasound blood flow to each tumor evident before was not visualized after treatment. The Wilcoxon rank sum test demonstrated no difference preoperatively and postoperatively in blood urea nitrogen, serum creatinine, creatinine clearance or differential renal function. We identified no toxicity associated with radio frequency interstitial tissue ablation. Of the excised tumors 11 were renal cell carcinoma and 3 fibrotic hemorrhagic cysts. For renal cell carcinoma the treatment effect involved the loss of nuclear detail and nonvisualization of nucleoli. These changes were not observed in any tumors resected without radio frequency interstitial tissue ablation. The treatment effect was noted in 10 of the 11 lesions, and in 1 case the treatment effect involved 35% of the tumor., Conclusions: No toxicity was associated with radio frequency interstitial tissue ablation. Percutaneous treatment of renal tumors is planned to evaluate the treatment effect better and further evaluate toxicity.
- Published
- 2000
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