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Organic composts are significant sources of microplastic (MP) pollution in soils, and their input is much higher in greenhouse agriculture than open-field agriculture. However, how long-term compost application affects MPs pollution in greenhouse soil profiles remains unclear. This study examined MPs characteristics in chicken manure compost and earthworms, exploring the long-term impacts of compost application on MPs accumulation and vertical migration in 0–100 cm soil depth through a 15-year greenhouse experiment. Microplastics abundance was 3965 items kg−1in compost, 191–248 items kg−1in compost-amended soils, and 2.73–4.52 items individual−1in earthworms from compost-amended soils; the latter two increased significantly with compost application and were significantly higher than unamended soils. Soil MPs accumulation from long-term compost amendment contributed 45.4% of the total. The proportion of MPs