2,459 results on '"Litonjua, A"'
Search Results
2. The metabolic role of vitamin D in children’s neurodevelopment: a network study
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De Marzio, Margherita, Lasky-Su, Jessica, Chu, Su H., Prince, Nicole, Litonjua, Augusto A., Weiss, Scott T., Kelly, Rachel S., and Glass, Kimberly R.
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- 2024
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3. Genotype–microbiome–metabolome associations in early childhood and their link to BMI
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Andrea Aparicio, Zheng Sun, Diane R. Gold, Jessica A. Lasky‐Su, Augusto A. Litonjua, Scott T. Weiss, Kathleen Lee‐Sarwar, and Yang‐Yu Liu
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Microbiology ,QR1-502 - Published
- 2024
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4. Metabolomic data presents challenges for epidemiological meta-analysis: a case study of childhood body mass index from the ECHO consortium
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Prince, Nicole, Liang, Donghai, Tan, Youran, Alshawabkeh, Akram, Angel, Elizabeth Esther, Busgang, Stefanie A, Chu, Su H, Cordero, José F, Curtin, Paul, Dunlop, Anne L, Gilbert-Diamond, Diane, Giulivi, Cecilia, Hoen, Anne G, Karagas, Margaret R, Kirchner, David, Litonjua, Augusto A, Manjourides, Justin, McRitchie, Susan, Meeker, John D, Pathmasiri, Wimal, Perng, Wei, Schmidt, Rebecca J, Watkins, Deborah J, Weiss, Scott T, Zens, Michael S, Zhu, Yeyi, Lasky-Su, Jessica A, and Kelly, Rachel S
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Medical Biochemistry and Metabolomics ,Reproductive Medicine ,Biomedical and Clinical Sciences ,Pediatric ,Clinical Research ,Women's Health ,Reproductive health and childbirth ,Child ,Female ,Pregnancy ,Humans ,Child ,Preschool ,Body Mass Index ,Reproducibility of Results ,Metabolomics ,Linear Models ,Lysine ,Metabolomic meta-analysis ,Metabolomic epidemiology ,Maternal metabolites ,Childhood obesity ,Analytical Chemistry ,Biochemistry and Cell Biology ,Clinical Sciences ,Biochemistry and cell biology ,Medical biochemistry and metabolomics ,Analytical chemistry - Abstract
IntroductionMeta-analyses across diverse independent studies provide improved confidence in results. However, within the context of metabolomic epidemiology, meta-analysis investigations are complicated by differences in study design, data acquisition, and other factors that may impact reproducibility.ObjectiveThe objective of this study was to identify maternal blood metabolites during pregnancy (> 24 gestational weeks) related to offspring body mass index (BMI) at age two years through a meta-analysis framework.MethodsWe used adjusted linear regression summary statistics from three cohorts (total N = 1012 mother-child pairs) participating in the NIH Environmental influences on Child Health Outcomes (ECHO) Program. We applied a random-effects meta-analysis framework to regression results and adjusted by false discovery rate (FDR) using the Benjamini-Hochberg procedure.ResultsOnly 20 metabolites were detected in all three cohorts, with an additional 127 metabolites detected in two of three cohorts. Of these 147, 6 maternal metabolites were nominally associated (P 100), we failed to identify significant metabolite associations after FDR correction. Our investigation demonstrates difficulties in applying epidemiological meta-analysis to clinical metabolomics, emphasizes challenges to reproducibility, and highlights the need for standardized best practices in metabolomic epidemiology.
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- 2024
5. The Environmental Influences on Child Health Outcomes (ECHO)-Wide Cohort
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Knapp, Emily A, Kress, Amii M, Parker, Corette B, Page, Grier P, McArthur, Kristen, Gachigi, Kennedy K, Alshawabkeh, Akram N, Aschner, Judy L, Bastain, Theresa M, Breton, Carrie V, Bendixsen, Casper G, Brennan, Patricia A, Bush, Nicole R, Buss, Claudia, Camargo, Carlos A, Catellier, Diane, Cordero, José F, Croen, Lisa, Dabelea, Dana, Deoni, Sean, D’Sa, Viren, Duarte, Cristiane S, Dunlop, Anne L, Elliott, Amy J, Farzan, Shohreh F, Ferrara, Assiamira, Ganiban, Jody M, Gern, James E, Giardino, Angelo P, Towe-Goodman, Nissa R, Gold, Diane R, Habre, Rima, Hamra, Ghassan B, Hartert, Tina, Herbstman, Julie B, Hertz-Picciotto, Irva, Hipwell, Alison E, Karagas, Margaret R, Karr, Catherine J, Keenan, Kate, Kerver, Jean M, Koinis-Mitchell, Daphne, Lau, Bryan, Lester, Barry M, Leve, Leslie D, Leventhal, Bennett, LeWinn, Kaja Z, Lewis, Johnnye, Litonjua, Augusto A, Lyall, Kristen, Madan, Juliette C, McEvoy, Cindy T, McGrath, Monica, Meeker, John D, Miller, Rachel L, Morello-Frosch, Rachel, Neiderhiser, Jenae M, O’Connor, Thomas G, Oken, Emily, O’Shea, Michael, Paneth, Nigel, Porucznik, Christina A, Sathyanarayana, Sheela, Schantz, Susan L, Spindel, Eliot R, Stanford, Joseph B, Stroustrup, Annemarie, Teitelbaum, Susan L, Trasande, Leonardo, Volk, Heather, Wadhwa, Pathik D, Weiss, Scott T, Woodruff, Tracey J, Wright, Rosalind J, Zhao, Qi, Jacobson, Lisa P, and Outcomes, on behalf of program collaborators for Environmental Influences on Child Health
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Public Health ,Health Sciences ,Clinical Research ,Behavioral and Social Science ,Prevention ,Pediatric ,Social Determinants of Health ,Obesity ,2.4 Surveillance and distribution ,Good Health and Well Being ,Child ,Humans ,United States ,Environmental Exposure ,Cohort Studies ,Child Health ,Air Pollution ,Outcome Assessment ,Health Care ,adolescent ,child ,child development ,child health ,child well-being ,cohort studies ,environmental exposure ,epidemiologic methods ,Mathematical Sciences ,Medical and Health Sciences ,Epidemiology - Abstract
The Environmental Influences on Child Health Outcomes (ECHO)-Wide Cohort Study (EWC), a collaborative research design comprising 69 cohorts in 31 consortia, was funded by the National Institutes of Health (NIH) in 2016 to improve children's health in the United States. The EWC harmonizes extant data and collects new data using a standardized protocol, the ECHO-Wide Cohort Data Collection Protocol (EWCP). EWCP visits occur at least once per life stage, but the frequency and timing of the visits vary across cohorts. As of March 4, 2022, the EWC cohorts contributed data from 60,553 children and consented 29,622 children for new EWCP data and biospecimen collection. The median (interquartile range) age of EWCP-enrolled children was 7.5 years (3.7-11.1). Surveys, interviews, standardized examinations, laboratory analyses, and medical record abstraction are used to obtain information in 5 main outcome areas: pre-, peri-, and postnatal outcomes; neurodevelopment; obesity; airways; and positive health. Exposures include factors at the level of place (e.g., air pollution, neighborhood socioeconomic status), family (e.g., parental mental health), and individuals (e.g., diet, genomics).
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- 2023
6. Extracellular Vesicle-Encapsulated microRNAs as Novel Biomarkers of Lung Health.
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Eckhardt, Christina M, Gambazza, Simone, Bloomquist, Tessa R, De Hoff, Peter, Vuppala, Aishwarya, Vokonas, Pantel S, Litonjua, Augusto A, Sparrow, David, Parvez, Faruque, Laurent, Louise C, Schwartz, Joel, Baccarelli, Andrea A, and Wu, Haotian
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Genetics ,Lung ,Clinical Research ,Prevention ,Biotechnology ,Respiratory ,Good Health and Well Being ,Humans ,MicroRNAs ,Lung Injury ,Longitudinal Studies ,Prospective Studies ,Biomarkers ,Extracellular Vesicles ,extracellular vesicles ,microRNAs ,lung function ,spirometry ,Medical and Health Sciences ,Respiratory System - Abstract
Rationale: Early detection of respiratory diseases is critical to facilitate delivery of disease-modifying interventions. Extracellular vesicle-enriched microRNAs (EV-miRNAs) may represent reliable markers of early lung injury. Objectives: Evaluate associations of plasma EV-miRNAs with lung function. Methods: The prospective NAS (Normative Aging Study) collected plasma EV-miRNA measurements from 1996-2015 and spirometry every 3-5 years through 2019. Associations of EV-miRNAs with baseline lung function were modeled using linear regression. To complement the individual miRNA approach, unsupervised machine learning was used to identify clusters of participants with distinct EV-miRNA profiles. Associations of EV-miRNA profiles with multivariate latent longitudinal lung function trajectories were modeled using log binomial regression. Biological functions of significant EV-miRNAs were explored using pathway analyses. Results were replicated in an independent sample of NAS participants and in the HEALS (Health Effects of Arsenic Longitudinal Study). Measurements and Main Results: In the main cohort of 656 participants, 51 plasma EV-miRNAs were associated with baseline lung function (false discovery rate-adjusted P value
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- 2023
7. Bilirubin metabolism in early life and respiratory health during preschool age: A combined analysis of two independent birth cohorts
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Kim, Min, Brustad, Nicklas, Eliasen, Anders U., Ali, Mina, Wang, Tingting, Rasmussen, Morten A., Ernst, Madeleine, Hougaard, David, Litonjua, Augusto A., Wheelock, Craig E., Kelly, Rachel S., Chen, Yulu, Prince, Nicole, Townsend, Paul A., Stokholm, Jakob, Weiss, Scott T., Bønnelykke, Klaus, Lasky-Su, Jessica, and Chawes, Bo
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- 2024
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8. Urinary eicosanoid levels in early life and risk of atopic disease in childhood
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Chen, Liang, Brustad, Nicklas, Kim, Min, Luo, Yang, Wang, Tingting, Ali, Mina, Prince, Nicole, Chen, Yulu, Chu, Su, Begum, Sofina, Mendez, Kevin, Kelly, Rachel S., Schoos, Ann-Marie, Rasmussen, Morten A., Zurita, Javier, Kolmert, Johan, Stokholm, Jakob, Litonjua, Augusto, Weiss, Scott T., Bønnelykke, Klaus, Wheelock, Craig E., Lasky-Su, Jessica, and Chawes, Bo
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- 2024
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9. Association of maternal fish consumption and ω-3 supplement use during pregnancy with child autism-related outcomes: results from a cohort consortium analysis
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Smith, PB, Newby, KL, Jacobson, LP, Catellier, DJ, Gershon, R, Cella, D, Alshawabkeh, AN, Cordero, J, Meeker, J, Aschner, J, Teitelbaum, SL, Stroustrup, A, Mansbach, JM, Spergel, JM, Samuels-Kalow, ME, Stevenson, MD, Bauer, CS, Koinis Mitchell, D, Deoni, S, D’Sa, V, Duarte, CS, Monk, C, Posner, J, Canino, G, Seroogy, C, Bendixsen, C, Hertz-Picciotto, I, Keenan, K, Karr, C, Tylavsky, F, Mason, A, Zhao, Q, Sathyanarayana, S, LeWinn, KZ, Lester, B, Carter, B, Pastyrnak, S, Neal, C, Smith, L, Helderman, J, Weiss, ST, Litonjua, A, O’Connor, G, Zeiger, R, Bacharier, L, Volk, H, Ozonoff, S, Schmidt, R, Simhan, H, Kerver, JM, Barone, C, Fussman, C, Paneth, N, Elliott, M, Ruden, D, Porucznik, C, Giardino, A, Innocenti, M, Silver, R, Conradt, E, Bosquet-Enlow, M, Huddleston, K, Nguyen, R, Trasande, L, Swan, S, Lyall, Kristen, Westlake, Matt, Musci, Rashelle J, Gachigi, Kennedy, Barrett, Emily S, Bastain, Theresa M, Bush, Nicole R, Buss, Claudia, Camargo, Carlos A, Jr., Croen, Lisa A, Dabelea, Dana, Dunlop, Anne L, Elliott, Amy J, Ferrara, Assiamira, Ghassabian, Akhgar, Gern, James E, Hare, Marion E, Hertz-Picciotto, Irva, Hipwell, Alison E, Hockett, Christine W, Karagas, Margaret R, Lugo-Candelas, Claudia, O’Connor, Thomas G, Schmidt, Rebecca J, Stanford, Joseph B, Straughen, Jennifer K, Shuster, Coral L, Wright, Robert O, Wright, Rosalind J, Zhao, Qi, and Oken, Emily
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- 2024
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10. Sociodemographic Correlates of High Cardiovascular Health Across Childhood and Adolescence: A Prospective Study Among 2 Cohorts in the ECHO Consortium
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Wei Perng, Noya Galai, Qi Zhao, Augusto Litonjua, Sarah Geiger, Katherine A. Sauder, T. Michael O'Shea, Marie‐France Hivert, Emily Oken, Dana Dabelea, and Izzuddin M. Aris
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cardiovascular disease ,cardiovascular health ,epidemiology ,Life's Essential 8 ,primordial prevention ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Background This study seeks to characterize cardiovascular health (CVH) from early childhood to late adolescence and identify sociodemographic correlates of high CVH that serve as levers for optimizing CVH across early life. Methods and Results Among 1530 youth aged 3 to 20 years from 2 cohorts in the ECHO (Environmental Influences on Child Health Outcomes) consortium, we first derived CVH scores on the basis of the Life's Essential 8 construct comprising 4 behavioral (nicotine use/exposure, physical activity, sleep, and diet) and 4 health factors (body mass index, blood pressure, non–high‐density lipoprotein cholesterol, and fasting glucose) during early childhood (mean age, 3.5 years), middle childhood (8.0 years), early adolescence (13.3 years), and late adolescence (17.8 years). Next, we used generalized regression to estimate the probability of high (versus not high) CVH with respect to sociodemographic characteristics. Overall CVH score was stable across life stages: 81.2±7.6, 83.3±8.0, and 81.7±8.9 of 100 possible points in early childhood, middle childhood, and early adolescence, respectively. Accordingly, during these life stages, most children (63.3%–71.5%) had high CVH (80 to $70 000. These associations were driven by behavioral factors. Conclusions Although most youth maintained high CVH across childhood, the decline by late adolescence indicates that cardiovascular disease prevention should occur before the early teen years. Disparities in high CVH over time with respect to sociodemographic characteristics were explained by behavioral factors, pointing toward prevention targets.
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- 2024
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11. Preschool impulse oscillometry predicts active asthma and impaired lung function at school age
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Knihtilä, Hanna M., Stubbs, Benjamin J., Carey, Vincent J., Laranjo, Nancy, Zeiger, Robert S., Bacharier, Leonard B., O’Connor, George T., Weiss, Scott T., and Litonjua, Augusto A.
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- 2024
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12. Correction: Racial and geographic variation in effects of maternal education and neighborhood-level measures of socioeconomic status on gestational age at birth: Findings from the ECHO cohorts.
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Dunlop, Anne L, Essalmi, Alicynne Glazier, Avalos, Lyndsay, Breton, Carrie, Camargo, Carlos A, Cowell, Whitney J, Dabelea, Dana, Dager, Stephen R, Duarte, Cristiane, Elliott, Amy, Fichorova, Raina, Gern, James, Hedderson, Monique M, Thepaksorn, Elizabeth Hom, Huddleston, Kathi, Karagas, Margaret R, Kleinman, Ken, Leve, Leslie, Li, Ximin, Li, Yijun, Litonjua, Augusto, Ludena-Rodriguez, Yunin, Madan, Juliette C, Nino, Julio Mateus, McEvoy, Cynthia, O'Connor, Thomas G, Padula, Amy M, Paneth, Nigel, Perera, Frederica, Sathyanarayana, Sheela, Schmidt, Rebecca J, Schultz, Robert T, Snowden, Jessica, Stanford, Joseph B, Trasande, Leonardo, Volk, Heather E, Wheaton, William, Wright, Rosalind J, McGrath, Monica, and program collaborators for Environmental Influences on Child Health Outcomes
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program collaborators for Environmental Influences on Child Health Outcomes ,General Science & Technology - Abstract
[This corrects the article DOI: 10.1371/journal.pone.0245064.].
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- 2022
13. The Role of Childhood Asthma in Obesity Development
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Stratakis, Nikos, Garcia, Erika, Chandran, Aruna, Hsu, Tingju, Alshawabkeh, Akram, Aris, Izzuddin M, Aschner, Judy L, Breton, Carrie, Burbank, Allison, Camargo, Carlos A, Carroll, Kecia N, Chen, Zhanghua, Claud, Erika C, Dabelea, Dana, Dunlop, Anne L, Elliott, Amy J, Ferrara, Assiamira, Ganiban, Jody M, Gern, James E, Gold, Diane R, Gower, William A, Hertz-Picciotto, Irva, Karagas, Margaret R, Karr, Catherine J, Lester, Barry, Leve, Leslie D, Litonjua, Augusto A, Ludena, Yunin, McEvoy, Cindy T, Miller, Rachel L, Mueller, Noel T, O’Connor, Thomas G, Oken, Emily, O’Shea, T Michael, Perera, Frederica, Stanford, Joseph B, Rivera-Spoljaric, Katherine, Rundle, Andrew, Trasande, Leonardo, Wright, Rosalind J, Zhang, Yue, Zhu, Yeyi, Berhane, Kiros, Gilliland, Frank, and Chatzi, Lida
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Epidemiology ,Public Health ,Health Sciences ,Prevention ,Pediatric ,Nutrition ,Childhood Obesity ,Asthma ,Lung ,Obesity ,2.1 Biological and endogenous factors ,2.4 Surveillance and distribution ,Respiratory ,Adolescent ,Body Mass Index ,Child ,Female ,Humans ,Incidence ,Male ,Pediatric Obesity ,Proportional Hazards Models ,Risk Factors ,asthma ,obesity ,childhood ,asthma medication ,ECHO ,on behalf of program collaborators for Environmental Influences on Child Health Outcomes ,Statistics ,Public Health and Health Services ,Public health - Abstract
RationaleAsthma and obesity often co-occur. It has been hypothesized that asthma may contribute to childhood obesity onset.ObjectivesTo determine if childhood asthma is associated with incident obesity and examine the role of asthma medication in this association.MethodsWe studied 8,716 children between ages 6 and 18.5 years who were nonobese at study entry participating in 18 US cohorts of the Environmental influences on Child Health Outcomes program (among 7,299 children with complete covariate data mean [SD] study entry age = 7.2 [1.6] years and follow up = 5.3 [3.1] years).Measurements and main resultsWe defined asthma based on caregiver report of provider diagnosis. Incident obesity was defined as the first documented body mass index ≥95th percentile for age and sex following asthma status ascertainment. Over the study period, 26% of children had an asthma diagnosis and 11% developed obesity. Cox proportional hazards models with sex-specific baseline hazards were fitted to assess the association of asthma diagnosis with obesity incidence. Children with asthma had a 23% (95% confidence intervals [CI] = 4, 44) higher risk for subsequently developing obesity compared with those without asthma. A novel mediation analysis was also conducted to decompose the total asthma effect on obesity into pathways mediated and not mediated by asthma medication use. Use of asthma medication attenuated the total estimated effect of asthma on obesity by 64% (excess hazard ratios = 0.64; 95% CI = -1.05, -0.23).ConclusionsThis nationwide study supports the hypothesis that childhood asthma is associated with later risk of obesity. Asthma medication may reduce this association and merits further investigation as a potential strategy for obesity prevention among children with asthma.
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- 2022
14. Meta-analysis of epigenome-wide association studies in newborns and children show widespread sex differences in blood DNA methylation.
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Solomon, Olivia, Huen, Karen, Yousefi, Paul, Küpers, Leanne K, González, Juan R, Suderman, Matthew, Reese, Sarah E, Page, Christian M, Gruzieva, Olena, Rzehak, Peter, Gao, Lu, Bakulski, Kelly M, Novoloaca, Alexei, Allard, Catherine, Pappa, Irene, Llambrich, Maria, Vives, Marta, Jima, Dereje D, Kvist, Tuomas, Baccarelli, Andrea, White, Cory, Rezwan, Faisal I, Sharp, Gemma C, Tindula, Gwen, Bergström, Anna, Grote, Veit, Dou, John F, Isaevska, Elena, Magnus, Maria C, Corpeleijn, Eva, Perron, Patrice, Jaddoe, Vincent WV, Nohr, Ellen A, Maitre, Lea, Foraster, Maria, Hoyo, Cathrine, Håberg, Siri E, Lahti, Jari, DeMeo, Dawn L, Zhang, Hongmei, Karmaus, Wilfried, Kull, Inger, Koletzko, Berthold, Feinberg, Jason I, Gagliardi, Luigi, Bouchard, Luigi, Ramlau-Hansen, Cecilia Høst, Tiemeier, Henning, Santorelli, Gillian, Maguire, Rachel L, Czamara, Darina, Litonjua, Augusto A, Langhendries, Jean-Paul, Plusquin, Michelle, Lepeule, Johanna, Binder, Elisabeth B, Verduci, Elvira, Dwyer, Terence, Carracedo, Ángel, Ferre, Natalia, Eskenazi, Brenda, Kogevinas, Manolis, Nawrot, Tim S, Munthe-Kaas, Monica C, Herceg, Zdenko, Relton, Caroline, Melén, Erik, Gruszfeld, Dariusz, Breton, Carrie, Fallin, MD, Ghantous, Akram, Nystad, Wenche, Heude, Barbara, Snieder, Harold, Hivert, Marie-France, Felix, Janine F, Sørensen, Thorkild IA, Bustamante, Mariona, Murphy, Susan K, Raikkönen, Katri, Oken, Emily, Holloway, John W, Arshad, Syed Hasan, London, Stephanie J, and Holland, Nina
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Humans ,DNA Methylation ,Epigenesis ,Genetic ,Pregnancy ,Sex Characteristics ,Adolescent ,Child ,Infant ,Newborn ,Female ,Male ,Epigenomics ,Epigenome ,Children ,Cord blood ,DNA methylation ,EWAS ,Sex ,Digestive Diseases ,Human Genome ,Genetics ,Prevention ,Pediatric ,Aetiology ,2.1 Biological and endogenous factors ,Good Health and Well Being ,Toxicology - Abstract
BackgroundAmong children, sex-specific differences in disease prevalence, age of onset, and susceptibility have been observed in health conditions including asthma, immune response, metabolic health, some pediatric and adult cancers, and psychiatric disorders. Epigenetic modifications such as DNA methylation may play a role in the sexual differences observed in diseases and other physiological traits.MethodsWe performed a meta-analysis of the association of sex and cord blood DNA methylation at over 450,000 CpG sites in 8438 newborns from 17 cohorts participating in the Pregnancy And Childhood Epigenetics (PACE) Consortium. We also examined associations of child sex with DNA methylation in older children ages 5.5-10 years from 8 cohorts (n = 4268).ResultsIn newborn blood, sex was associated at Bonferroni level significance with differences in DNA methylation at 46,979 autosomal CpG sites (p
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- 2022
15. Birth outcomes in relation to neighborhood food access and individual food insecurity during pregnancy in the Environmental Influences on Child Health Outcomes (ECHO)-wide cohort study
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Smith, P.B., Newby, L.K., Jacobson, L.P., Catellier, D.J., Fuselier, G, Gershon, R, Cella, D, Teitelbaum, S.L., Stroustrup, A, Merhar, S, Lampland, A, Reynolds, A, Hudak, M, Pryhuber, G, Moore, P, Washburn, L, Gatzke-Kopp, L, Swingler, M, Laham, F.R., Mansbach, J.M., Wu, S, Spergel, J.M., Celedón, J.C., Puls, H.T., Teach, S.J., Porter, S.C., Waynik, I.Y., Iyer, S.S., Samuels-Kalow, M.E., Thompson, A.D., Stevenson, M.D., Bauer, C.S., Inhofe, N.R., Boos, M, Macias, C.G., Koinis Mitchell, D, Duarte, C.S., Monk, C, Posner, J, Canino, G, Croen, L, Gern, J, Zoratti, E, Seroogy, C, Bendixsen, C, Jackson, D, Bacharier, L, O’Connor, G, Kattan, M, Wood, R, Rivera-Spoljaric, K, Hershey, G, Johnson, C, Bastain, T, Farzan, S, Habre, R, Hertz-Picciotto, I, Hipwell, A, Keenan, K, Karr, C, Tylavsky, F, Mason, A, Zhao, Q, Sathyanarayana, S, Bush, N, LeWinn, K.Z., Carter, B, Pastyrnak, S, Neal, C, Smith, L, Helderman, J, Leve, L, Neiderhiser, J, Weiss, S.T., Litonjua, A, Zeiger, R, McEvoy, C, Tepper, R, Lyall, K, Volk, H, Landa, R, Ozonoff, S, Schmidt, R, Dager, S, Schultz, R, Piven, J, O’Shea, M, Vaidya, R, Obeid, R, Rollins, C, Bear, K, Lenski, M, Singh, R, Msall, M, Frazier, J, Gogcu, S, Montgomery, A, Kuban, K, Douglass, L, Jara, H, Joseph, R, Kerver, J.M., Barone, C, Fussman, C, Paneth, N, Elliott, M, Ruden, D, Herbstman, J, Schantz, S, Woodruff, T, Stanford, J, Porucznik, C, Giardino, A, Wright, R.J., Bosquet-Enlow, M, Huddleston, K, Nguyen, R, Barrett, E, Swan, S, Miller, R, Aris, Izzuddin M, Lin, Pi-I D, Wu, Allison J, Dabelea, Dana, Lester, Barry M, Wright, Rosalind J, Karagas, Margaret R, Kerver, Jean M, Dunlop, Anne L, Joseph, Christine LM, Camargo, Carlos A, Jr., Ganiban, Jody M, Schmidt, Rebecca J, Strakovsky, Rita S, McEvoy, Cindy T, Hipwell, Alison E, O’Shea, Thomas Michael, McCormack, Lacey A, Maldonado, Luis E, Niu, Zhongzheng, Ferrara, Assiamira, Zhu, Yeyi, Chehab, Rana F, Kinsey, Eliza W, Bush, Nicole R, Nguyen, Ruby HN., Carroll, Kecia N, Barrett, Emily S, Lyall, Kristen, Sims-Taylor, Lauren M, Trasande, Leonardo, Biagini, Jocelyn M, Breton, Carrie V, Patti, Marisa A, Coull, Brent, Amutah-Onukagha, Ndidiamaka, Hacker, Michele R, James-Todd, Tamarra, and Oken, Emily
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- 2024
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16. Vitamin D constrains inflammation by modulating the expression of key genes on Chr17q12-21.1
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Ayse Kilic, Arda Halu, Margherita De Marzio, Enrico Maiorino, Melody G Duvall, Thayse Regina Bruggemann, Joselyn J Rojas Quintero, Robert Chase, Hooman Mirzakhani, Ayse Özge Sungur, Janine Koepke, Taiji Nakano, Hong Yong Peh, Nandini Krishnamoorthy, Raja-Elie Abdulnour, Katia Georgopoulos, Augusto A Litonjua, Marie Demay, Harald Renz, Bruce D Levy, and Scott T Weiss
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asthma ,vitamin D receptor ,inflammation ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Vitamin D possesses immunomodulatory functions and vitamin D deficiency has been associated with the rise in chronic inflammatory diseases, including asthma (Litonjua and Weiss, 2007). Vitamin D supplementation studies do not provide insight into the molecular genetic mechanisms of vitamin D-mediated immunoregulation. Here, we provide evidence for vitamin D regulation of two human chromosomal loci, Chr17q12-21.1 and Chr17q21.2, reliably associated with autoimmune and chronic inflammatory diseases. We demonstrate increased vitamin D receptor (Vdr) expression in mouse lung CD4+ Th2 cells, differential expression of Chr17q12-21.1 and Chr17q21.2 genes in Th2 cells based on vitamin D status and identify the IL-2/Stat5 pathway as a target of vitamin D signaling. Vitamin D deficiency caused severe lung inflammation after allergen challenge in mice that was prevented by long-term prenatal vitamin D supplementation. Mechanistically, vitamin D induced the expression of the Ikzf3-encoded protein Aiolos to suppress IL-2 signaling and ameliorate cytokine production in Th2 cells. These translational findings demonstrate mechanisms for the immune protective effect of vitamin D in allergic lung inflammation with a strong molecular genetic link to the regulation of both Chr17q12-21.1 and Chr17q21.2 genes and suggest further functional studies and interventional strategies for long-term prevention of asthma and other autoimmune disorders.
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- 2024
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17. Elevated third trimester corticosteroid levels are associated with fewer offspring infections
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Prince, Nicole, Kelly, Rachel S., Chu, Su H., Kachroo, Priyadarshini, Chen, Yulu, Mendez, Kevin M., Begum, Sofina, Bisgaard, Hans, Bønnelykke, Klaus, Kim, Min, Levy, Ofer, Litonjua, Augusto A., Wheelock, Craig E., Weiss, Scott T., Chawes, Bo L., and Lasky-Su, Jessica A.
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- 2023
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18. Benchmarking omics-based prediction of asthma development in children
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Wang, Xu-Wen, Wang, Tong, Schaub, Darius P., Chen, Can, Sun, Zheng, Ke, Shanlin, Hecker, Julian, Maaser-Hecker, Anna, Zeleznik, Oana A., Zeleznik, Roman, Litonjua, Augusto A., DeMeo, Dawn L., Lasky-Su, Jessica, Silverman, Edwin K., Liu, Yang-Yu, and Weiss, Scott T.
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- 2023
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19. Prenatal vitamin D supplementation to prevent childhood asthma: 15-year results from the Vitamin D Antenatal Asthma Reduction Trial (VDAART)
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Weiss, Scott T., Mirzakhani, Hooman, Carey, Vincent J., O’Connor, George T., Zeiger, Robert S., Bacharier, Leonard B., Stokes, Jeffrey, and Litonjua, Augusto A.
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- 2024
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20. Early-life microRNA signatures in cord blood associated with allergic rhinitis and asthma development
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Mirzakhani, Hooman, Wang, Alberta L., Sharma, Rinku, Sun, Maoyun, Panganiban, Ronald, Lu, Quan, McGeachie, Michael, Lu, Zheng, Litonjua, Augusto A., Tantisira, Kelan G., and Weiss, Scott T.
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- 2024
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21. Early life gut microbiome in children following spontaneous preterm birth and maternal preeclampsia
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Shadid, Iskander L.C., Lee-Sarwar, Kathleen, Lu, Zheng, Yadama, Arya, Laranjo, Nancy, Carey, Vincent, O’Connor, George T., Zeiger, Robert S., Bacharier, Leonard, Guchelaar, Henk-Jan, Liu, Yang-Yu, Litonjua, Augusto A., Weiss, Scott T., and Mirzakhani, Hooman
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- 2023
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22. Cord blood DNA methylation signatures associated with preeclampsia are enriched for cardiovascular pathways: insights from the VDAART trial
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Knihtilä, Hanna M., Kachroo, Priyadarshini, Shadid, Iskander, Raissadati, Alireza, Peng, Cheng, McElrath, Thomas F., Litonjua, Augusto A., Demeo, Dawn L., Loscalzo, Joseph, Weiss, Scott T., and Mirzakhani, Hooman
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- 2023
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23. Maternal vitamin D–related metabolome and offspring risk of asthma outcomes
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Kim, Min, Brustad, Nicklas, Ali, Mina, Gürdeniz, Gözde, Arendt, Morten, Litonjua, Augusto A., Wheelock, Craig E., Kelly, Rachel S., Chen, Yulu, Prince, Nicole, Guo, Feng, Zhou, Xiaobo, Stokholm, Jakob, Bønnelykke, Klaus, Weiss, Scott T., Bisgaard, Hans, Lasky-Su, Jessica, and Chawes, Bo
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- 2023
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24. Predicting metabolomic profiles from microbial composition through neural ordinary differential equations
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Wang, Tong, Wang, Xu-Wen, Lee-Sarwar, Kathleen A., Litonjua, Augusto A., Weiss, Scott T., Sun, Yizhou, Maslov, Sergei, and Liu, Yang-Yu
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- 2023
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25. Racial and geographic variation in effects of maternal education and neighborhood-level measures of socioeconomic status on gestational age at birth: Findings from the ECHO cohorts
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Dunlop, Anne L, Essalmi, Alicynne Glazier, Alvalos, Lyndsay, Breton, Carrie, Camargo, Carlos A, Cowell, Whitney J, Dabelea, Dana, Dager, Stephen R, Duarte, Cristiane, Elliott, Amy, Fichorova, Raina, Gern, James, Hedderson, Monique M, Thepaksorn, Elizabeth Hom, Huddleston, Kathi, Karagas, Margaret R, Kleinman, Ken, Leve, Leslie, Li, Ximin, Li, Yijun, Litonjua, Augusto, Ludena-Rodriguez, Yunin, Madan, Juliette C, Nino, Julio Mateus, McEvoy, Cynthia, O’Connor, Thomas G, Padula, Amy M, Paneth, Nigel, Perera, Frederica, Sathyanarayana, Sheela, Schmidt, Rebecca J, Schultz, Robert T, Snowden, Jessica, Stanford, Joseph B, Trasande, Leonardo, Volk, Heather E, Wheaton, William, Wright, Rosalind J, McGrath, Monica, and Outcomes, on behalf of program collaborators for Environmental Influences on Child Health
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Epidemiology ,Public Health ,Health Sciences ,Clinical Research ,Maternal Health ,Women's Health ,Behavioral and Social Science ,Health Disparities ,Minority Health ,Perinatal Period - Conditions Originating in Perinatal Period ,Pediatric ,Preterm ,Low Birth Weight and Health of the Newborn ,Social Determinants of Health ,Prevention ,Reproductive health and childbirth ,Quality Education ,Adult ,Ethnicity ,Female ,Gestational Age ,Humans ,Infant ,Newborn ,Maternal Age ,Mothers ,Pregnancy ,Social Class ,United States ,program collaborators for Environmental Influences on Child Health Outcomes ,General Science & Technology - Abstract
Preterm birth occurs at excessively high and disparate rates in the United States. In 2016, the National Institutes of Health (NIH) launched the Environmental influences on Child Health Outcomes (ECHO) program to investigate the influence of early life exposures on child health. Extant data from the ECHO cohorts provides the opportunity to examine racial and geographic variation in effects of individual- and neighborhood-level markers of socioeconomic status (SES) on gestational age at birth. The objective of this study was to examine the association between individual-level (maternal education) and neighborhood-level markers of SES and gestational age at birth, stratifying by maternal race/ethnicity, and whether any such associations are modified by US geographic region. Twenty-six ECHO cohorts representing 25,526 mother-infant pairs contributed to this disseminated meta-analysis that investigated the effect of maternal prenatal level of education (high school diploma, GED, or less; some college, associate's degree, vocational or technical training [reference category]; bachelor's degree, graduate school, or professional degree) and neighborhood-level markers of SES (census tract [CT] urbanicity, percentage of black population in CT, percentage of population below the federal poverty level in CT) on gestational age at birth (categorized as preterm, early term, full term [the reference category], late, and post term) according to maternal race/ethnicity and US region. Multinomial logistic regression was used to estimate odds ratios (OR) and 95% confidence intervals (CIs). Cohort-specific results were meta-analyzed using a random effects model. For women overall, a bachelor's degree or above, compared with some college, was associated with a significantly decreased odds of preterm birth (aOR 0.72; 95% CI: 0.61-0.86), whereas a high school education or less was associated with an increased odds of early term birth (aOR 1.10, 95% CI: 1.00-1.21). When stratifying by maternal race/ethnicity, there were no significant associations between maternal education and gestational age at birth among women of racial/ethnic groups other than non-Hispanic white. Among non-Hispanic white women, a bachelor's degree or above was likewise associated with a significantly decreased odds of preterm birth (aOR 0.74 (95% CI: 0.58, 0.94) as well as a decreased odds of early term birth (aOR 0.84 (95% CI: 0.74, 0.95). The association between maternal education and gestational age at birth varied according to US region, with higher levels of maternal education associated with a significantly decreased odds of preterm birth in the Midwest and South but not in the Northeast and West. Non-Hispanic white women residing in rural compared to urban CTs had an increased odds of preterm birth; the ability to detect associations between neighborhood-level measures of SES and gestational age for other race/ethnic groups was limited due to small sample sizes within select strata. Interventions that promote higher educational attainment among women of reproductive age could contribute to a reduction in preterm birth, particularly in the US South and Midwest. Further individual-level analyses engaging a diverse set of cohorts are needed to disentangle the complex interrelationships among maternal education, neighborhood-level factors, exposures across the life course, and gestational age at birth outcomes by maternal race/ethnicity and US geography.
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- 2021
26. Early-Life Weight Status and Risk of Childhood Asthma or Recurrent Wheeze in Preterm and Term Offspring
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Shah, Jhill, Shadid, Iskander L.C., Carey, Vincent J., Laranjo, Nancy, O’Connor, George T., Zeiger, Robert S., Bacharier, Leonard, Litonjua, Augusto A., Weiss, Scott T., and Mirzakhani, Hooman
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- 2023
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27. Incidence rates of childhood asthma with recurrent exacerbations in the US Environmental influences on Child Health Outcomes (ECHO) program
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Smith, P.B., Newby, K.L., Jacobson, L.P., Catellier, D.J., Gershon, R., Cella, D., Alshawabkeh, A., Aschner, J., Merhar, S., Ren, C., Reynolds, A., Keller, R., Pryhuber, G., Duncan, A., Lampland, A., Wadhawan, R., Wagner, C., Hudak, M., Mayock, D., Walshburn, L., Teitelbaum, S.L., Stroustrup, A., Trasande, L., Blair, C., Gatzke-Kopp, L., Swingler, M., Mansbach, J., Spergel, J., Puls, H., Stevenson, M., Bauer, C., Deoni, S., Duarte, C., Dunlop, A., Elliott, A., Croen, L., Bacharier, L., O’Connor, G., Kattan, M., Wood, R., Hershey, G., Ownby, D., Hertz-Picciotto, I., Hipwell, A., Karagas, M., Karr, C., Mason, A., Sathyanarayana, S., Lester, B., Carter, B., Neal, C., Smith, L., Helderman, J., Leve, L., Ganiban, J., Neiderhiser, J., Weiss, S., Zeiger, R., Tepper, R., Lyall, K., Landa, R., Ozonoff, S., Schmidt, R., Dager, S., Schultz, R., Piven, J., Volk, H., Vaidya, R., Obeid, R., Rollins, C., Bear, K., Pastyrnak, S., Lenski, M., Msall, M., Frazier, J., Washburn, L., Montgomery, A., Barone, C., McKane, P., Paneth, N., Elliott, M., Herbstman, J., Schantz, S., Porucznik, C., Silver, R., Conradt, E., Bosquet-Enlow, M., Huddleston, K., Bush, N., Nguyen, R., O'Connor, T., Samuels-Kalow, M., Miller, Rachel L., Schuh, Holly, Chandran, Aruna, Aris, Izzuddin M., Bendixsen, Casper, Blossom, Jeffrey, Breton, Carrie, Camargo, Carlos A., Jr., Canino, Glorisa, Carroll, Kecia N., Commodore, Sarah, Cordero, José F., Dabelea, Dana M., Ferrara, Assiamira, Fry, Rebecca C., Ganiban, Jody M., Gern, James E., Gilliland, Frank D., Gold, Diane R., Habre, Rima, Hare, Marion E., Harte, Robyn N., Hartert, Tina, Hasegawa, Kohei, Khurana Hershey, Gurjit K., Jackson, Daniel J., Joseph, Christine, Kerver, Jean M., Kim, Haejin, Litonjua, Augusto A., Marsit, Carmen J., McEvoy, Cindy, Mendonça, Eneida A., Moore, Paul E., Nkoy, Flory L., O’Connor, Thomas G., Oken, Emily, Ownby, Dennis, Perzanowski, Matthew, Rivera-Spoljaric, Katherine, Ryan, Patrick H., Singh, Anne Marie, Stanford, Joseph B., Wright, Rosalind J., Wright, Robert O., Zanobetti, Antonella, Zoratti, Edward, and Johnson, Christine C.
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- 2023
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28. Environmental and genetic associations with aberrant early-life gut microbial maturation in childhood asthma
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Chen, Yih-Chieh, Chen, Yulu, Lasky-Su, Jessica, Kelly, Rachel S., Stokholm, Jakob, Bisgaard, Hans, Bønnelykke, Klaus, Pedersen, Casper-Emil Tingskov, Chawes, Bo, Laranjo, Nancy, Weiss, Scott T., Litonjua, Augusto A., and Lee-Sarwar, Kathleen
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- 2023
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29. The Impact of Baseline 25-Hydroxyvitamin D Level and Gestational Age on Prenatal Vitamin D Supplementation to Prevent Offspring Asthma or Recurrent Wheezing
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Shadid, Iskander LC., Brustad, Nicklas, Lu, Mengdi, Chawes, Bo L., Bisgaard, Hans, Zeiger, Robert S., O’Connor, George T., Bacharier, Leonard B., Guchelaar, Henk-Jan, Litonjua, Augusto A., Weiss, Scott T., and Mirzakhani, Hooman
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- 2023
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30. Plasma concentrations of per- and polyfluoroalkyl substances are associated with perturbations in lipid and amino acid metabolism
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Prince, Nicole, Begum, Sofina, Mínguez-Alarcón, Lidia, Génard-Walton, Maximilien, Huang, Mengna, Soeteman, Djøra I., Wheelock, Craig, Litonjua, Augusto A., Weiss, Scott T., Kelly, Rachel S., and Lasky-Su, Jessica
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- 2023
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31. Revealing the importance of prenatal gut microbiome in offspring neurodevelopment in humans
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Sun, Zheng, Lee-Sarwar, Kathleen, Kelly, Rachel S., Lasky-Su, Jessica A., Litonjua, Augusto A., Weiss, Scott T., and Liu, Yang-Yu
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- 2023
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32. Bik promotes proteasomal degradation to control low-grade inflammation
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Mebratu, Yohannes A., Jones, Jane T., Liu, Congjian, Negasi, Zerihun H., Rahman, Mizanur, Rojas-Quintero, Joselyn, O'Connor, George T., Gao, Wei, Dupuis, Josee, Cho, Michael H., Litonjua, Augusto A., Randell, Scott, and Tesfaigzi, Yohannes
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Physiological aspects ,Development and progression ,Genetic aspects ,Health aspects ,Emphysema -- Development and progression ,Inflammation -- Development and progression ,Apoptotic proteins -- Physiological aspects -- Health aspects ,Proteolysis -- Health aspects -- Genetic aspects ,Emphysema, Pulmonary -- Development and progression - Abstract
Introduction Inflammation is part of many important defense mechanisms that are necessary to protect the host from both infections and other environmental insults. Several highly conserved pathways orchestrate the onset [...], Although chronic low-grade inflammation does not cause immediate clinical symptoms, over the longer term, it can enhance other insults or age-dependent damage to organ systems and thereby contribute to age-related disorders, such as respiratory disorders, heart disease, metabolic disorders, autoimmunity, and cancer. However, the molecular mechanisms governing low-level inflammation are largely unknown. We discovered that Bcl-2-interacting killer (Bik) deficiency causes low- level inflammation even at baseline and the development of spontaneous emphysema in female but not male mice. Similarly, a single nucleotide polymorphism that reduced Bik levels was associated with increased inflammation and enhanced decline in lung function in humans. Transgenic expression of Bik in the airways of B/'/c- deficient mice inhibited allergen- or LPS- induced lung inflammation and reversed emphysema in female mice. Bik deficiency increased nuclear but not cytosolic p65 levels because Bik, by modifying the BH4 domain of Bcl-2, interacted with regulatory particle non-ATPase 1 (RPN1) and RPN2 and enhanced proteasomal degradation of nuclear proteins. Bik deficiency increased inflammation primarily in females because Bcl-2 and Bik levels were reduced in lung tissues and airway cells of female compared with male mice. Therefore, controlling low-grade inflammation by modifying the unappreciated role of Bik and Bcl-2 in facilitating proteasomal degradation of nuclear proteins may be crucial in treating chronic age-related diseases.
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- 2024
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33. Integration of circulating microRNAs and transcriptome signatures identifies early‐pregnancy biomarkers of preeclampsia
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Hooman Mirzakhani, Diane E. Handy, Zheng Lu, Ben Oppenheimer, Augusto A. Litonjua, Joseph Loscalzo, and Scott T. Weiss
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circulating RNA ,gene expression ,hypertension ,microRNA expression ,preeclampsia ,pregnancy ,Medicine (General) ,R5-920 - Abstract
Abstract Background MicroRNAs (miRNAs) have been implicated in the pathobiology of preeclampsia, a common hypertensive disorder of pregnancy. In a nested matched case‐control cohort within the Vitamin D Antenatal Asthma Reduction Trial (VDAART), we previously identified peripheral blood mRNA signatures related to preeclampsia and vitamin D status (≤30 ng/mL) during gestation from 10 to 18 weeks, using differential expression analysis. Methods Using quantitative PCR arrays, we conducted profiling of circulating miRNAs at 10–18 weeks of gestation in the same VDAART cohort to identify differentially expressed (DE) miRNAs associated with preeclampsia and vitamin D status. For the validation of the expression of circulating miRNA signatures in the placenta, the HTR‐8/SVneo trophoblast cell line was used. Targets of circulating miRNA signatures in the preeclampsia mRNA signatures were identified by consensus ranking of miRNA‐target prediction scores from four sources. The connected component of target signatures was identified by mapping to the protein‐protein interaction (PPI) network and hub targets were determined. As experimental validation, we examined the gene and protein expression of IGF1R, one of the key hub genes, as a target of the DE miRNA, miR‐182‐5p, in response to a miR‐182‐5p mimic in HTR‐8/SVneo cells. Results Pregnant women with preeclampsia had 16 circulating DE miRNAs relative to normal pregnancy controls that were also DE under vitamin D insufficiency (9/16 = 56% upregulated, FDR
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- 2023
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34. Motorcycle and Vehicle Detection for Applications in Road Safety and Traffic Monitoring Systems.
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Gerson Gerard L. Cruz, Aaron Litonjua, Alysia Noreen P. San Juan, Nathaniel J. C. Libatique, Marion Ivan L. Tan, and Jaime Luis E. Honrado
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- 2022
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35. Maternal vitamin D status modifies the effects of early life tobacco exposure on child lung function
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Knihtilä, Hanna M., Huang, Mengna, Prince, Nicole, Stubbs, Benjamin J., Carey, Vincent J., Laranjo, Nancy, Mirzakhani, Hooman, Zeiger, Robert S., Bacharier, Leonard B., O’Connor, George T., Litonjua, Augusto A., Weiss, Scott T., and Lasky-Su, Jessica
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- 2023
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36. Prenatal maternal antidepressants, anxiety, and depression and offspring DNA methylation: epigenome-wide associations at birth and persistence into early childhood
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Cardenas, Andres, Faleschini, Sabrina, Cortes Hidalgo, Andrea, Rifas-Shiman, Sheryl L, Baccarelli, Andrea A, DeMeo, Dawn L, Litonjua, Augusto A, Neumann, Alexander, Felix, Janine F, Jaddoe, Vincent WV, El Marroun, Hanan, Tiemeier, Henning, Oken, Emily, Hivert, Marie-France, and Burris, Heather H
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Clinical Research ,Perinatal Period - Conditions Originating in Perinatal Period ,Conditions Affecting the Embryonic and Fetal Periods ,Pediatric ,Human Genome ,Depression ,Mental Health ,Genetics ,Brain Disorders ,2.1 Biological and endogenous factors ,Aetiology ,2.2 Factors relating to the physical environment ,Mental health ,Reproductive health and childbirth ,Good Health and Well Being ,Adult ,Antidepressive Agents ,Anxiety ,Child ,Preschool ,DNA Methylation ,DNA-Binding Proteins ,Epigenesis ,Genetic ,Female ,Fetal Blood ,Humans ,Infant ,Infant ,Newborn ,Male ,Maternal Age ,Maternal Exposure ,Oligonucleotide Array Sequence Analysis ,Pregnancy ,Prenatal Exposure Delayed Effects ,Prospective Studies ,Transcription Factors ,Whole Genome Sequencing ,Maternal depression ,Maternal anxiety ,Antidepressants ,DNA methylation ,Fetal programming ,Clinical Sciences ,Paediatrics and Reproductive Medicine - Abstract
BACKGROUND:Maternal mood disorders and their treatment during pregnancy may have effects on the offspring epigenome. We aim to evaluate associations of maternal prenatal antidepressant use, anxiety, and depression with cord blood DNA methylation across the genome at birth and test for persistence of associations in early and mid-childhood blood DNA. METHODS:A discovery phase was conducted in Project Viva, a prospective pre-birth cohort study with external replication in an independent cohort, the Generation R Study. In Project Viva, pregnant women were recruited between 1999 and 2002 in Eastern Massachusetts, USA. In the Generation R Study, pregnant women were recruited between 2002 and 2006 in Rotterdam, the Netherlands. In Project Viva, 479 infants had data on maternal antidepressant use, anxiety, depression, and cord blood DNA methylation, 120 children had DNA methylation measured in early childhood (~ 3 years), and 460 in mid-childhood (~ 7 years). In the Generation R Study, 999 infants had data on maternal antidepressants and cord blood DNA methylation. The prenatal antidepressant prescription was obtained from medical records. At-mid pregnancy, symptoms of anxiety and depression were assessed with the Pregnancy-Related Anxiety Scale and the Edinburgh Postnatal Depression Scale in Project Viva and with the Brief Symptom Inventory in the Generation R Study. Genome-wide DNA methylation was measured using the Infinium HumanMethylation450 BeadChip in both cohorts. RESULTS:In Project Viva, 2.9% (14/479) pregnant women were prescribed antidepressants, 9.0% (40/445) experienced high pregnancy-related anxiety, and 8.2% (33/402) reported symptoms consistent with depression. Newborns exposed to antidepressants in pregnancy had 7.2% lower DNA methylation (95% CI, - 10.4, - 4.1; P = 1.03 × 10-8) at cg22159528 located in the gene body of ZNF575, and this association replicated in the Generation R Study (β = - 2.5%; 95% CI - 4.2, - 0.7; P = 0.006). In Project Viva, the association persisted in early (β = - 6.2%; 95% CI - 10.7, - 1.6) but not mid-childhood. We observed cohort-specific associations for maternal anxiety and depression in Project Viva that did not replicate. CONCLUSIONS:The ZNF575 gene is involved in transcriptional regulation but specific functions are largely unknown. Given the widespread use of antidepressants in pregnancy, as well as the effects of exposure to anxiety and depression, implications of potential fetal epigenetic programming by these risk factors and their impacts on development merit further investigation.
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- 2019
37. The nasal methylome as a biomarker of asthma and airway inflammation in children.
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Cardenas, Andres, Sordillo, Joanne, Rifas-Shiman, Sheryl, Chung, Wonil, Liang, Liming, Coull, Brent, Hivert, Marie-France, Lai, Peggy, Forno, Erick, Celedón, Juan, Litonjua, Augusto, Brennan, Kasey, DeMeo, Dawn, Baccarelli, Andrea, Oken, Emily, and Gold, Diane
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Adolescent ,Asthma ,Biomarkers ,Child ,CpG Islands ,DNA Methylation ,Epigenesis ,Genetic ,Epigenomics ,Female ,Humans ,Inflammation ,Male ,Nasal Mucosa - Abstract
The nasal cellular epigenome may serve as biomarker of airway disease and environmental response. Here we collect nasal swabs from the anterior nares of 547 children (mean-age 12.9 y), and measure DNA methylation (DNAm) with the Infinium MethylationEPIC BeadChip. We perform nasal Epigenome-Wide Association analyses (EWAS) of current asthma, allergen sensitization, allergic rhinitis, fractional exhaled nitric oxide (FeNO) and lung function. We find multiple differentially methylated CpGs (FDR
- Published
- 2019
38. Maternal corticotropin-releasing hormone is associated with LEP DNA methylation at birth and in childhood: an epigenome-wide study in Project Viva
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Tian, Fu-Ying, Rifas-Shiman, Sheryl L, Cardenas, Andres, Baccarelli, Andrea A, DeMeo, Dawn L, Litonjua, Augusto A, Rich-Edwards, Janet W, Gillman, Matthew W, Oken, Emily, and Hivert, Marie-France
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Reproductive Medicine ,Biomedical and Clinical Sciences ,Human Genome ,Genetics ,Pediatric ,Prevention ,Clinical Research ,2.1 Biological and endogenous factors ,2.2 Factors relating to the physical environment ,Aetiology ,Reproductive health and childbirth ,Adult ,Child ,Corticotropin-Releasing Hormone ,CpG Islands ,DNA Methylation ,Epigenome ,Female ,Fetal Blood ,Genome-Wide Association Study ,Humans ,Infant ,Newborn ,Leptin ,Male ,Pregnancy ,Prenatal Exposure Delayed Effects ,Promoter Regions ,Genetic ,Prospective Studies ,Medical and Health Sciences ,Education ,Endocrinology & Metabolism ,Biomedical and clinical sciences ,Health sciences - Abstract
BackgroundCorticotropin-releasing hormone (CRH) plays a central role in regulating the secretion of cortisol which controls a wide range of biological processes. Fetuses overexposed to cortisol have increased risks of disease in later life. DNA methylation may be the underlying association between prenatal cortisol exposure and health effects. We investigated associations between maternal CRH levels and epigenome-wide DNA methylation of cord blood in offsprings and evaluated whether these associations persisted into mid-childhood.MethodsWe investigated mother-child pairs enrolled in the prospective Project Viva pre-birth cohort. We measured DNA methylation in 257 umbilical cord blood samples using the HumanMethylation450 Bead Chip. We tested associations of maternal CRH concentration with cord blood cells DNA methylation, adjusting the model for maternal age at enrollment, education, maternal race/ethnicity, maternal smoking status, pre-pregnancy body mass index, parity, gestational age at delivery, child sex, and cell-type composition in cord blood. We further examined the persistence of associations between maternal CRH levels and DNA methylation in children's blood cells collected at mid-childhood (n = 239, age: 6.7-10.3 years) additionally adjusting for the children's age at blood drawn.ResultsMaternal CRH levels are associated with DNA methylation variability in cord blood cells at 96 individual CpG sites (False Discovery Rate
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- 2019
39. Meta-analysis of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight.
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Küpers, Leanne K, Monnereau, Claire, Sharp, Gemma C, Yousefi, Paul, Salas, Lucas A, Ghantous, Akram, Page, Christian M, Reese, Sarah E, Wilcox, Allen J, Czamara, Darina, Starling, Anne P, Novoloaca, Alexei, Lent, Samantha, Roy, Ritu, Hoyo, Cathrine, Breton, Carrie V, Allard, Catherine, Just, Allan C, Bakulski, Kelly M, Holloway, John W, Everson, Todd M, Xu, Cheng-Jian, Huang, Rae-Chi, van der Plaat, Diana A, Wielscher, Matthias, Merid, Simon Kebede, Ullemar, Vilhelmina, Rezwan, Faisal I, Lahti, Jari, van Dongen, Jenny, Langie, Sabine AS, Richardson, Tom G, Magnus, Maria C, Nohr, Ellen A, Xu, Zongli, Duijts, Liesbeth, Zhao, Shanshan, Zhang, Weiming, Plusquin, Michelle, DeMeo, Dawn L, Solomon, Olivia, Heimovaara, Joosje H, Jima, Dereje D, Gao, Lu, Bustamante, Mariona, Perron, Patrice, Wright, Robert O, Hertz-Picciotto, Irva, Zhang, Hongmei, Karagas, Margaret R, Gehring, Ulrike, Marsit, Carmen J, Beilin, Lawrence J, Vonk, Judith M, Jarvelin, Marjo-Riitta, Bergström, Anna, Örtqvist, Anne K, Ewart, Susan, Villa, Pia M, Moore, Sophie E, Willemsen, Gonneke, Standaert, Arnout RL, Håberg, Siri E, Sørensen, Thorkild IA, Taylor, Jack A, Räikkönen, Katri, Yang, Ivana V, Kechris, Katerina, Nawrot, Tim S, Silver, Matt J, Gong, Yun Yun, Richiardi, Lorenzo, Kogevinas, Manolis, Litonjua, Augusto A, Eskenazi, Brenda, Huen, Karen, Mbarek, Hamdi, Maguire, Rachel L, Dwyer, Terence, Vrijheid, Martine, Bouchard, Luigi, Baccarelli, Andrea A, Croen, Lisa A, Karmaus, Wilfried, Anderson, Denise, de Vries, Maaike, Sebert, Sylvain, Kere, Juha, Karlsson, Robert, Arshad, Syed Hasan, Hämäläinen, Esa, Routledge, Michael N, Boomsma, Dorret I, Feinberg, Andrew P, Newschaffer, Craig J, Govarts, Eva, Moisse, Matthieu, Fallin, M Daniele, Melén, Erik, and Prentice, Andrew M
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Fetus ,Humans ,Prenatal Exposure Delayed Effects ,Birth Weight ,Folic Acid ,DNA ,Body Mass Index ,Smoking ,DNA Methylation ,Epigenesis ,Genetic ,CpG Islands ,Fetal Development ,Pregnancy ,Genome ,Human ,Adolescent ,Adult ,Child ,Infant ,Newborn ,Female ,Male ,Genome-Wide Association Study ,Epigenesis ,Genetic ,Genome ,Human ,Infant ,Newborn - Abstract
Birthweight is associated with health outcomes across the life course, DNA methylation may be an underlying mechanism. In this meta-analysis of epigenome-wide association studies of 8,825 neonates from 24 birth cohorts in the Pregnancy And Childhood Epigenetics Consortium, we find that DNA methylation in neonatal blood is associated with birthweight at 914 sites, with a difference in birthweight ranging from -183 to 178 grams per 10% increase in methylation (PBonferroni
- Published
- 2019
40. The Association of Prenatal C-Reactive Protein Levels With Childhood Asthma and Atopy
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Chen, Yih-Chieh S., Lee-Sarwar, Kathleen A., Mirzakhani, Hooman, O’Connor, George T., Bacharier, Leonard B., Zeiger, Robert S., Knihtilä, Hanna M., Jha, Anjali, Kelly, Rachel S., Laranjo, Nancy, Fichorova, Raina N., Luu, Ngan, Weiss, Scott T., and Litonjua, Augusto A.
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- 2022
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41. Association of the gut microbiome and metabolome with wheeze frequency in childhood asthma
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Lee-Sarwar, Kathleen, Dedrick, Sandra, Momeni, Babak, Kelly, Rachel S., Zeiger, Robert S., O’Connor, George T., Sandel, Megan T., Bacharier, Leonard B., Beigelman, Avraham, Laranjo, Nancy, Gold, Diane R., Lasky-Su, Jessica, Litonjua, Augusto A., Liu, Yang-Yu, and Weiss, Scott T.
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- 2022
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42. Genotype–microbiome–metabolome associations in early childhood and their link to BMI.
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Aparicio, Andrea, Sun, Zheng, Gold, Diane R., Lasky‐Su, Jessica A., Litonjua, Augusto A., Weiss, Scott T., Lee‐Sarwar, Kathleen, and Liu, Yang‐Yu
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- 2024
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43. Epigenome-wide association study of total serum immunoglobulin E in children: a life course approach
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Peng, Cheng, Cardenas, Andres, Rifas-Shiman, Sheryl L, Hivert, Marie-France, Gold, Diane R, Platts-Mills, Thomas A, Lin, Xihong, Oken, Emily, Baccarelli, Andrea A, Litonjua, Augusto A, and DeMeo, Dawn L
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Biological Sciences ,Genetics ,Human Genome ,Pediatric ,Clinical Research ,2.1 Biological and endogenous factors ,2.2 Factors relating to the physical environment ,Inflammatory and immune system ,Reproductive health and childbirth ,Child ,Child ,Preschool ,Cohort Studies ,CpG Islands ,DNA Methylation ,Epigenesis ,Genetic ,Epigenomics ,Female ,Fetal Blood ,Genome-Wide Association Study ,Humans ,Hypersensitivity ,Immediate ,Immunoglobulin E ,Longitudinal Studies ,Male ,Pregnancy ,Prospective Studies ,Epigenome-wide association studies ,Total serum IgE ,Life course analysis ,Clinical Sciences ,Paediatrics and Reproductive Medicine - Abstract
BackgroundIgE-mediated sensitization may be epigenetically programmed in utero, but early childhood environment may further alter complex traits and disease phenotypes through epigenetic plasticity. However, the epigenomic footprint underpinning IgE-mediated type-I hypersensitivity has not been well-understood, especially under a longitudinal early-childhood life-course framework.MethodsWe used epigenome-wide DNA methylation (IlluminaHumanMethylation450 BeadChip) in cord blood and mid-childhood peripheral blood to investigate pre- and post-natal methylation marks associated with mid-childhood (age 6.7-10.2) total serum IgE levels in 217 mother-child pairs in Project Viva-a prospective longitudinal pre-birth cohort in eastern Massachusetts, USA. We identified methylation sites associated with IgE using covariate-adjusted robust linear regressions.ResultsNineteen methylation marks in cord blood were associated with IgE in mid-childhood (FDR
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- 2018
44. Meta-analysis of effects of exclusive breastfeeding on infant gut microbiota across populations.
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Ho, Nhan T, Li, Fan, Lee-Sarwar, Kathleen A, Tun, Hein M, Brown, Bryan P, Pannaraj, Pia S, Bender, Jeffrey M, Azad, Meghan B, Thompson, Amanda L, Weiss, Scott T, Azcarate-Peril, M Andrea, Litonjua, Augusto A, Kozyrskyj, Anita L, Jaspan, Heather B, Aldrovandi, Grace M, and Kuhn, Louise
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Humans ,Diarrhea ,Biodiversity ,Breast Feeding ,Child ,Preschool ,Infant ,Female ,Dysbiosis ,Gastrointestinal Microbiome ,Nutrition ,Infant Mortality ,Pediatric ,Emerging Infectious Diseases ,Child ,Preschool - Abstract
Previous studies on the differences in gut microbiota between exclusively breastfed (EBF) and non-EBF infants have provided highly variable results. Here we perform a meta-analysis of seven microbiome studies (1825 stool samples from 684 infants) to compare the gut microbiota of non-EBF and EBF infants across populations. In the first 6 months of life, gut bacterial diversity, microbiota age, relative abundances of Bacteroidetes and Firmicutes, and predicted microbial pathways related to carbohydrate metabolism are consistently higher in non-EBF than in EBF infants, whereas relative abundances of pathways related to lipid metabolism, vitamin metabolism, and detoxification are lower. Variation in predicted microbial pathways associated with non-EBF infants is larger among infants born by Caesarian section than among those vaginally delivered. Longer duration of exclusive breastfeeding is associated with reduced diarrhea-related gut microbiota dysbiosis. Furthermore, differences in gut microbiota between EBF and non-EBF infants persist after 6 months of age. Our findings elucidate some mechanisms of short and long-term benefits of exclusive breastfeeding across different populations.
- Published
- 2018
45. Residential Proximity to Major Roadways at Birth, DNA Methylation at Birth and Midchildhood, and Childhood Cognitive Test Scores: Project Viva(Massachusetts, USA)
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Peng, Cheng, den Dekker, Martijn, Cardenas, Andres, Rifas-Shiman, Sheryl L, Gibson, Heike, Agha, Golareh, Harris, Maria H, Coull, Brent A, Schwartz, Joel, Litonjua, Augusto A, DeMeo, Dawn L, Hivert, Marie-France, Gilman, Matthew W, Sagiv, Sharon K, de Kluizenaar, Yvonne, Felix, Janine F, Jaddoe, Vincent W, Oken, Emily, Duijts, Liesbeth, Gold, Diane R, and Baccarelli, Andrea A
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Health Sciences ,Pediatric ,Clinical Research ,Genetics ,2.2 Factors relating to the physical environment ,Aetiology ,Boston ,Child ,Cognition ,Cohort Studies ,DNA Methylation ,Epigenesis ,Genetic ,Female ,Fetal Blood ,Humans ,Infant ,Newborn ,Linear Models ,Male ,Pregnancy ,Prenatal Exposure Delayed Effects ,Residence Characteristics ,Environmental Sciences ,Medical and Health Sciences ,Toxicology ,Biomedical and clinical sciences ,Environmental sciences ,Health sciences - Abstract
BackgroundEpigenetic variability is hypothesized as a regulatory pathway through which prenatal exposures may influence child development and health.ObjectiveWe sought to examine the associations of residential proximity to roadways at birth and epigenome-wide DNA methylation. We also assessed associations of differential methylation with child cognitive outcomes.MethodsWe estimated residential proximity to roadways at birth using a geographic information system (GIS) and cord blood methylation using Illumina's HumanMethylation450-array in 482 mother-child pairs in Project Viva. We identified individual CpGs associated with residential-proximity-to-roadways at birth using robust linear regression [[Formula: see text]]. We also estimated association between proximity-to-roadways at birth and methylation of the same sites in blood samples collected at age 7-11 y ([Formula: see text]). We ran the same analyses in the Generation R Study for replication ([Formula: see text]). In Project Viva, we investigated associations of differential methylation at birth with midchildhood cognition using linear regression.ResultsLiving closer to major roadways at birth was associated with higher cord blood (and-more weakly-midchildhood blood) methylation of four sites in LAMB2. For each halving of residential-proximity-to-major-roadways, we observed a 0.82% increase in DNA methylation at cg05654765 [95% confidence interval (CI): (0.54%, 1.10%)], 0.88% at cg14099457 [95% CI: (0.56%, 1.19%)], 0.19% at cg03732535 [95% CI: (0.11%, 0.28)], and 1.08% at cg02954987 [95% CI: (0.65%, 1.51%)]. Higher cord blood methylation of these sites was associated with lower midchildhood nonverbal cognitive scores. Our results did not replicate in the Generation R Study.ConclusionsOur discovery results must be interpreted with caution, given that they were not replicated in a separate cohort. However, living close to major roadways at birth was associated with cord blood methylation of sites in LAMB2-a gene known to be linked to axonal development-in our U.S. cohort. Higher methylation of these sites associated with lower nonverbal cognitive scores at age 7-11 y in the same children. https://doi.org/10.1289/EHP2034.
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- 2018
46. The Association of Prenatal Vitamin D Sufficiency With Aeroallergen Sensitization and Allergic Rhinitis in Early Childhood
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Chen, Yih-Chieh S., Mirzakhani, Hooman, Lu, Mengdi, Zeiger, Robert S., O'Connor, George T., Sandel, Megan T., Bacharier, Leonard B., Beigelman, Avraham, Carey, Vincent J., Harshfield, Benjamin J., Laranjo, Nancy, Litonjua, Augusto A., Weiss, Scott T., and Lee-Sarwar, Kathleen A.
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- 2021
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47. Maternal corticotropin-releasing hormone is associated with LEP DNA methylation at birth and in childhood: an epigenome-wide study in Project Viva
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Tian, Fu-Ying, Rifas-Shiman, Sheryl L, Cardenas, Andres, Baccarelli, Andrea A, DeMeo, Dawn L, Litonjua, Augusto A, Rich-Edwards, Janet W, Gillman, Matthew W, Oken, Emily, and Hivert, Marie-France
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Medical and Health Sciences ,Education ,Endocrinology & Metabolism ,Biomedical and clinical sciences ,Health sciences - Published
- 2018
48. The effect of air pollution on the transcriptomics of the immune response to respiratory infection
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Daniel P. Croft, David S. Burton, David J. Nagel, Soumyaroop Bhattacharya, Ann R. Falsey, Steve N. Georas, Philip K. Hopke, Carl J. Johnston, R. Matthew Kottmann, Augusto A. Litonjua, Thomas J. Mariani, David Q. Rich, Kelly Thevenet-Morrison, Sally W. Thurston, Mark J. Utell, and Matthew N. McCall
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Medicine ,Science - Abstract
Abstract Combustion related particulate matter air pollution (PM) is associated with an increased risk of respiratory infections in adults. The exact mechanism underlying this association has not been determined. We hypothesized that increased concentrations of combustion related PM would result in dysregulation of the innate immune system. This epidemiological study includes 111 adult patients hospitalized with respiratory infections who underwent transcriptional analysis of their peripheral blood. We examined the association between gene expression at the time of hospitalization and ambient measurements of particulate air pollutants in the 28 days prior to hospitalization. For each pollutant and time lag, gene-specific linear models adjusting for infection type were fit using LIMMA (Linear Models For Microarray Data), and pathway/gene set analyses were performed using the CAMERA (Correlation Adjusted Mean Rank) program. Comparing patients with viral and/or bacterial infection, the expression patterns associated with air pollution exposure differed. Adjusting for the type of infection, increased concentrations of Delta-C (a marker of biomass smoke) and other PM were associated with upregulation of iron homeostasis and protein folding. Increased concentrations of black carbon (BC) were associated with upregulation of viral related gene pathways and downregulation of pathways related to antigen presentation. The pollutant/pathway associations differed by lag time and by type of infection. This study suggests that the effect of air pollution on the pathogenesis of respiratory infection may be pollutant, timing, and infection specific.
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- 2021
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49. Low gestational vitamin D level and childhood asthma are related to impaired lung function in high-risk children
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Knihtilä, Hanna M., Stubbs, Benjamin J., Carey, Vincent J., Laranjo, Nancy, Chu, Su H., Kelly, Rachel S., Zeiger, Robert S., Bacharier, Leonard B., O’Connor, George T., Lasky-Su, Jessica, Weiss, Scott T., and Litonjua, Augusto A.
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- 2021
- Full Text
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50. Prenatal Exposure to Mercury: Associations with Global DNA Methylation and Hydroxymethylation in Cord Blood and in Childhood.
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Cardenas, Andres, Rifas-Shiman, Sheryl L, Godderis, Lode, Duca, Radu-Corneliu, Navas-Acien, Ana, Litonjua, Augusto A, DeMeo, Dawn L, Brennan, Kasey J, Amarasiriwardena, Chitra J, Hivert, Marie-France, Gillman, Matthew W, Oken, Emily, and Baccarelli, Andrea A
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Fetal Blood ,Humans ,Prenatal Exposure Delayed Effects ,Mercury ,Environmental Pollutants ,Maternal Exposure ,DNA Methylation ,Epigenesis ,Genetic ,Pregnancy ,Child ,Female ,Epigenesis ,Genetic ,Toxicology ,Environmental Sciences ,Medical and Health Sciences - Abstract
BackgroundMercury is a global pollutant, and prenatal exposure is associated with adverse health effects. To date, no studies have evaluated the association between prenatal mercury exposure and DNA hydroxymethylation, an epigenetic modification important for tissue differentiation and embryonic development.ObjectivesWe sought to evaluate the association between prenatal mercury exposure and offspring global DNA methylation and hydroxymethylation at birth and test for persistence of the association in childhood.MethodsWithin Project Viva, a U.S. prebirth cohort, we examined associations of maternal second trimester red blood cell mercury (RBC-Hg) concentrations with global 5-hydroxymethylcytosine (%-5hmC) and 5-methylcytosine (%-5mC) DNA content in blood collected at birth (n=306), early childhood (n=68; 2.9 to 4.9 y), and midchildhood (n=260; 6.7 to 10.5 y).ResultsMedian prenatal RBC-Hg concentration was 3.23μg/g [interquartile range (IQR)=3.29]. At birth, median cord blood %-5mC, %-5hmC, and their ratio were 4.95%, 0.22%, and 24.37, respectively. The mean adjusted difference [95% confidence interval (CI)] of blood %-5hmC for a doubling in prenatal RBC-Hg concentration was -0.013% (-0.029, 0.002), -0.031% (-0.056, -0.006), and 0.005% (-0.007, 0.018) at birth, early, and midchildhood, respectively. The corresponding relative adjusted change in the genomic ratio of %-5mC to %-5hmC for a doubling in prenatal RBC-Hg concentration was 4.70% (0.04, 9.58), 22.42% (7.73, 39.11), and 0.73% (-4.18, 5.88) at birth, early, and midchildhood, respectively. No associations were present between prenatal maternal RBC-Hg and %-5mC at any time point.ConclusionsPrenatal mercury exposure was associated with lower %-5hmC genomic content and a corresponding increase in the ratio of %-5mC to %-5hmC in cord blood. This association was persistent in early but not midchildhood blood. Our results demonstrate the potential malleability of epigenetic modifications associated with mercury exposure in utero. https://doi.org/10.1289/EHP1467.
- Published
- 2017
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