112,629 results on '"Lincoln, A"'
Search Results
2. Live Through This
- Author
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Lincoln, Astra
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- 2023
- Full Text
- View/download PDF
3. Resource Unit for Levels Seven and Eight Using the Occupational Clusters in Career Orientation. Lincoln County Exemplary Program in Vocational Education.
- Author
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Lincoln County Schools, Hamlin, WV. and Holstein, Herbert B.
- Abstract
The occupational resource unit, one of a series encompassing grade levels 1-10, was prepared by the Lincoln County (West Virginia) Exemplary Project staff to provide career exploration learning activities for the seventh and eighth grades. The career orientation materials are designed to give students a broad knowledge of the characteristics and functions, as well as the duties and rewards, of specific occupations within a broad spectrum of occupational families and to assist the student in understanding himself. The guide contains a synopsis of the entire unit, general objectives, behavioral objectives, teaching strategies, evaluation techniques, guidelines for correlating subject matter, and suggestions for field trips. Instructional materials include an occupational questionnaire, personality profile, and an outline of interview techniques. An extended resource bibliography stresses interpersonal competence and occupational information. Organized around a random selection of occupations within 15 occupational clusters, student involvement and participation is encouraged through suggestions for the use of simulated work experiences. Occupations within each cluster are categorized according to the following levels: professional, semiprofessional and managerial, technical and skilled, semiskilled, and unskilled. (MW)
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- 2024
4. THE 1968 CATALOG OF RECORDED TELEVISION COURSES AVAILABLE FROM NATIONAL GREAT PLAINS INSTRUCTIONAL TELEVISION LIBRARY.
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Nebraska Univ., Lincoln.
- Abstract
INTENDED FOR USE BY ADMINISTRATORS AND PLANNERS, THIS GUIDE DESCRIBES COURSES AVAILABLE FROM THE GREAT PLAINS ITV LIBRARY. FIVE INDICES ARE INCLUDED, ONE CLASSIFYING ELEMENTARY, JUNIOR HIGH, SECONDARY AND ADULT COURSES BY SUBJECT, ANOTHER LISTS THEM BY GRADE LEVEL. A THIRD LISTS COLLEGE COURSES BY SUBJECT, ANOTHER DESCRIBES INSERVICE TEACHER-TRAINING MATERIALS. A FINAL ALPHABETIZED INDEX LISTS ALL COURSES CURRENTLY AVAILABLE FROM THE GREAT PLAINS LIBRARY INCLUDING FORD FOUNDATION KINESCOPES. LEASING AND PURCHASING COSTS ARE GIVEN, AS WELL AS PREVIEWING POLICIES AND ORDERING INFORMATION. (JM)
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- 2024
5. Remembering William Moulden: Villanova University's Black Founder and Early Benefactor
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Lincoln, Angelina
- Published
- 2021
6. Outcomes from a Workshop on a National Center for Quantum Education
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Barnes, Edwin, Bennett, Michael B., Boltasseva, Alexandra, Borish, Victoria, Brown, Bennett, Carr, Lincoln D., Ceballos, Russell R., Dukes, Faith, Easton, Emily W., Economou, Sophia E., Edwards, E. E., Finkelstein, Noah D., Fracchiolla, C., Franklin, Diana, Freericks, J. K., Goss, Valerie, Hannum, Mark, Holincheck, Nancy, Kelly, Angela M., Lanes, Olivia, Lewandowski, H. J., Matsler, Karen Jo, Mercurio, Emily, Montaño, Inès, Murdock, Maajida, Peltz, Kiera, Perron, Justin K., Richardson, Christopher J. K., Rosenberg, Jessica L., Ross, Richard S., Ryu, Minjung, Samuel, Raymond E., Schrode, Nicole, Schwamberger, Susan, Searles, Thomas A., Singh, Chandralekha, Tingle, Alexandra, and Zwickl, Benjamin M.
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Physics - Physics Education - Abstract
In response to numerous programs seeking to advance quantum education and workforce development in the United States, experts from academia, industry, government, and professional societies convened for a National Science Foundation-sponsored workshop in February 2024 to explore the benefits and challenges of establishing a national center for quantum education. Broadly, such a center would foster collaboration and build the infrastructure required to develop a diverse and quantum-ready workforce. The workshop discussions centered around how a center could uniquely address gaps in public, K-12, and undergraduate quantum information science and engineering (QISE) education. Specifically, the community identified activities that, through a center, could lead to an increase in student awareness of quantum careers, boost the number of educators trained in quantum-related subjects, strengthen pathways into quantum careers, enhance the understanding of the U.S. quantum workforce, and elevate public engagement with QISE. Core proposed activities for the center include professional development for educators, coordinated curriculum development and curation, expanded access to educational laboratory equipment, robust evaluation and assessment practices, network building, and enhanced public engagement with quantum science.
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- 2024
7. Towards a Law of Iterated Expectations for Heuristic Estimators
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Christiano, Paul, Hilton, Jacob, Lincoln, Andrea, Neyman, Eric, and Xu, Mark
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Computer Science - Artificial Intelligence ,Computer Science - Machine Learning - Abstract
Christiano et al. (2022) define a *heuristic estimator* to be a hypothetical algorithm that estimates the values of mathematical expressions from arguments. In brief, a heuristic estimator $\mathbb{G}$ takes as input a mathematical expression $Y$ and a formal "heuristic argument" $\pi$, and outputs an estimate $\mathbb{G}(Y \mid \pi)$ of $Y$. In this work, we argue for the informal principle that a heuristic estimator ought not to be able to predict its own errors, and we explore approaches to formalizing this principle. Most simply, the principle suggests that $\mathbb{G}(Y - \mathbb{G}(Y \mid \pi) \mid \pi)$ ought to equal zero for all $Y$ and $\pi$. We argue that an ideal heuristic estimator ought to satisfy two stronger properties in this vein, which we term *iterated estimation* (by analogy to the law of iterated expectations) and *error orthogonality*. Although iterated estimation and error orthogonality are intuitively appealing, it can be difficult to determine whether a given heuristic estimator satisfies the properties. As an alternative approach, we explore *accuracy*: a property that (roughly) states that $\mathbb{G}$ has zero average error over a distribution of mathematical expressions. However, in the context of two estimation problems, we demonstrate barriers to creating an accurate heuristic estimator. We finish by discussing challenges and potential paths forward for finding a heuristic estimator that accords with our intuitive understanding of how such an estimator ought to behave, as well as the potential applications of heuristic estimators to understanding the behavior of neural networks., Comment: 47 pages, 2 tables, 1 figure
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- 2024
8. Rotationally Resolved Spectroscopy of a Single Polyatomic Molecule
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Calvin, Aaron, Brzeczek, Merrell, Kresch, Samuel, Lane, Elijah, Satterthwaite, Lincoln, Hawkins, Desi, and Patterson, David
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Physics - Chemical Physics - Abstract
We report the rotationally resolved spectrum of a single polyatomic molecular ion in the gas phase. Building upon the recently developed inelastic recoil spectroscopy (IRS) technique, we have achieved a spectral resolution sufficient to observe resolved rotational-vibrational transitions of a trapped cyclopropenyl cation, c-C3H3+. The high precision of IRS shown in this work presents an attractive platform for astrochemistry, single molecule chiral detection, and tests of fundamental physics.
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- 2024
9. The Religion of Empire: Political Theology in Blake’s Prophetic Symbolism by G. A. Rosso (review)
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Lincoln, Andrew
- Published
- 2021
- Full Text
- View/download PDF
10. Anna Barbauld and Charlotte Smith on War and Acquiescence
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Lincoln, Andrew
- Published
- 2020
11. The Art of Hunting: Coordinating Subsistence Laws with Alaska Native Harvesting Practices
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Lincoln, Amber
- Published
- 2020
12. William Blake on Self and Soul by Laura Quinney (review)
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Lincoln, Andrew
- Published
- 2020
- Full Text
- View/download PDF
13. Flexoelectricity versus Electrostatics in Polar Nematic Liquid Crystals
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Paik, Lincoln and Selinger, Jonathan V.
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Condensed Matter - Soft Condensed Matter - Abstract
Polar nematic liquid crystals have two special features, compared with conventional nematic liquid crystals. First, because of flexoelectricity, the combination of polar order and splay reduces the free energy. Second, because of electrostatics, any splay generates a bound charge density, which increases the free energy. To assess the competition between these two effects, we develop a theory that combines flexoelectricity and electrostatics. The theory predicts a phase diagram that includes ferroelectric, antiferroelectric, and conventional nematic phases.
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- 2024
14. Iterative quantum optimization of spin glass problems with rapidly oscillating transverse fields
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Barton, Brandon, Sagal, Jacob, Feeney, Sean, Grattan, George, Patnaik, Pratik, Oganesyan, Vadim, Carr, Lincoln D, and Kapit, Eliot
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Quantum Physics - Abstract
In this work, we introduce a new iterative quantum algorithm, called Iterative Symphonic Tunneling for Satisfiability problems (IST-SAT), which solves quantum spin glass optimization problems using high-frequency oscillating transverse fields. IST-SAT operates as a sequence of iterations, in which bitstrings returned from one iteration are used to set spin-dependent phases in oscillating transverse fields in the next iteration. Over several iterations, the novel mechanism of the algorithm steers the system toward the problem ground state. We benchmark IST-SAT on sets of hard MAX-3-XORSAT problem instances with exact state vector simulation, and report polynomial speedups over trotterized adiabatic quantum computation (TAQC) and the best known semi-greedy classical algorithm. When IST-SAT is seeded with a sufficiently good initial approximation, the algorithm converges to exact solution(s) in a polynomial number of iterations. Our numerical results identify a critial Hamming radius(CHR), or quality of initial approximation, where the time-to-solution crosses from exponential to polynomial scaling in problem size. By combining IST-SAT with future classical or quantum approximation algorithms, larger gains may be achieved. The mechanism we present in this work thus presents a new path toward achieving quantum advantage in optimization.
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- 2024
15. Kubernetes Deployment Options for On-Prem Clusters
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Bryant, Lincoln, Gardner, Robert W., Hu, Fengping, Jordan, David, and Taylor, Ryan P.
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Physics - Computational Physics ,Computer Science - Distributed, Parallel, and Cluster Computing - Abstract
Over the last decade, the Kubernetes container orchestration platform has become essential to many scientific workflows. Despite its popularity, deploying a production-ready Kubernetes cluster on-premises can be challenging for system administrators. Many of the proprietary integrations that application developers take for granted in commercial cloud environments must be replaced with alternatives when deployed locally. This article will compare three popular deployment strategies for sites deploying Kubernetes on-premise: Kubeadm with Kubespray, OpenShift / OKD and Rancher via K3S/RKE2.
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- 2024
16. Using graph neural networks to reconstruct charged pion showers in the CMS High Granularity Calorimeter
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Aamir, M., Acar, B., Adamov, G., Adams, T., Adloff, C., Afanasiev, S., Agrawal, C., Ahmad, A., Ahmed, H. A., Akbar, S., Akchurin, N., Akgul, B., Akgun, B., Akpinar, R. O., Aktas, E., AlKadhim, A., Alexakhin, V., Alimena, J., Alison, J., Alpana, A., Alshehri, W., Dominguez, P. Alvarez, Alyari, M., Amendola, C., Amir, R. B., Andersen, S. B., Andreev, Y., Antoszczuk, P. D., Aras, U., Ardila, L., Aspell, P., Avila, M., Awad, I., Aydilek, O., Azimi, Z., Pretel, A. Aznar, Bach, O. A., Bainbridge, R., Bakshi, A., Bam, B., Banerjee, S., Barney, D., Bayraktar, O., Beaudette, F., Beaujean, F., Becheva, E., Behera, P. K., Belloni, A., Bergauer, T., Besancon, M., Bylund, O. Bessidskaia, Bhatt, L., Bhowmil, D., Blekman, F., Blinov, P., Bloch, P., Bodek, A., Boger, a., Bonnemaison, A., Bouyjou, F., Brennan, L., Brondolin, E., Brusamolino, A., Bubanja, I., Perraguin, A. Buchot, Bunin, P., Misura, A. Burazin, Butler-nalin, A., Cakir, A., Callier, S., Campbell, S., Canderan, K., Cankocak, K., Cappati, A., Caregari, S., Carron, S., Carty, C., Cauchois, A., Ceard, L., Cerci, S., Chang, P. J., Chatterjee, R. M., Chatterjee, S., Chattopadhyay, P., Chatzistavrou, T., Chaudhary, M. S., Chauhan, A., Chen, J. A., Chen, J., Chen, Y., Cheng, K., Cheung, H., Chhikara, J., Chiron, A., Chiusi, M., Chokheli, D., Chudasama, R., Clement, E., Mendez, S. Coco, Coko, D., Coskun, K., Couderc, F., Crossman, B., Cui, Z., Cuisset, T., Cummings, G., Curtis, E. M., D'Alfonso, M., D-hler-ball, J., Dadazhanova, O., Damgov, J., Das, I., DasGupta, S., Dauncey, P., Mendes, A. David Tinoco, Davies, G., Davignon, O., DeLa, P. deBarbaroC., DeSilva, M., DeWit, A., Debbins, P., Defranchis, M. M., Delagnes, E., Devouge, P., Dewangan, C., DiGuglielmo, G., Diehl, L., Dilsiz, K., Dincer, G. G., Dittmann, J., Dragicevic, M., Du, D., Dubinchik, B., Dugad, S., Dulucq, F., Dumanoglu, I., Duran, B., Dutta, S., Dutta, V., Dychkant, A., Dünser, M., Edberg, T., Ehle, I. T., Berni, A. El, Elias, F., Eno, S. C., Erdogan, E. N., Erkmen, B., Ershov, Y., Ertorer, E. Y., Extier, S., Eychenne, L., Fedar, Y. E., Fedi, G., De Almeida, J. P. Figueiredo De De Sá Sousa, Alves, B. A. Fontana Santos Santos, Frahm, E., Francis, K., Freeman, J., French, T., Gaede, F., Gandhi, P. K., Ganjour, S., Garcia-Bellido, A., Gastaldi, F., Gazi, L., Gecse, Z., Gerwig, H., Gevin, O., Ghosh, S., Gill, K., Gleyzer, S., Godinovic, N., Goek, M., Goettlicher, P., Goff, R., Golunov, A., Gonultas, B., Martínez, J. D. González, Gorbounov, N., Gouskos, L., Gray, A., Gray, L., Grieco, C., Groenroos, S., Groner, D., Gruber, A., Grummer, A., Grönroos, S., Guilloux, F., Guler, Y., Gungordu, A. D., Guo, J., Guo, K., Guler, E. Gurpinar, Gutti, H. K., Guvenli, A. A., Gülmez, E., Hacisahinoglu, B., Halkin, Y., Machado, G. Hamilton Ilha, Hare, H. S., Hatakeyama, K., Heering, A. H., Hegde, V., Heintz, U., Hinton, N., Hinzmann, A., Hirschauer, J., Hitlin, D., Hos, İ., Hou, B., Hou, X., Howard, A., Howe, C., Hsieh, H., Hsu, T., Hua, H., Hummer, F., Imran, M., Incandela, J., Iren, E., Isildak, B., Jackson, P. S., Jackson, W. J., Jain, S., Jana, P., Jaroslavceva, J., Jena, S., Jige, A., Jordano, P. P., Joshi, U., Kaadze, K., Kafizov, A., Kalipoliti, L., Tharayil, A. Kallil, Kaluzinska, O., Kamble, S., Kaminskiy, A., Kanemura, M., Kanso, H., Kao, Y., Kapic, A., Kapsiak, C., Karjavine, V., Karmakar, S., Karneyeu, A., Kaya, M., Topaksu, A. Kayis, Kaynak, B., Kazhykarim, Y., Khan, F. A., Khudiakov, A., Kieseler, J., Kim, R. S., Klijnsma, T., Kloiber, E. G., Klute, M., Kocak, Z., Kodali, K. R., Koetz, K., Kolberg, T., Kolcu, O. B., Komaragiri, J. R., Komm, M., Kopsalis, I., Krause, H. A., Krawczyk, M. A., Vinayakam, T. R. Krishnaswamy, Kristiansen, K., Kristic, A., Krohn, M., Kronheim, B., Krüger, K., Kudtarkar, C., Kulis, S., Kumar, M., Kumar, N., Kumar, S., Verma, R. Kumar, Kunori, S., Kunts, A., Kuo, C., Kurenkov, A., Kuryatkov, V., Kyre, S., Ladenson, J., Lamichhane, K., Landsberg, G., Langford, J., Laudrain, A., Laughlin, R., Lawhorn, J., Dortz, O. Le, Lee, S. W., Lektauers, A., Lelas, D., Leon, M., Levchuk, L., Li, A. J., Li, J., Li, Y., Liang, Z., Liao, H., Lin, K., Lin, W., Lin, Z., Lincoln, D., Linssen, L., Litomin, A., Liu, G., Liu, Y., Lobanov, A., Lohezic, V., Loiseau, T., Lu, C., Lu, R., Lu, S. Y., Lukens, P., Mackenzie, M., Magnan, A., Magniette, F., Mahjoub, A., Mahon, D., Majumder, G., Makarenko, V., Malakhov, A., Malgeri, L., Mallios, S., Mandloi, C., Mankel, A., Mannelli, M., Mans, J., Mantilla, C., Martinez, G., Massa, C., Masterson, P., Matthewman, M., Matveev, V., Mayekar, S., Mazlov, I., Mehta, A., Mestvirishvili, A., Miao, Y., Milella, G., Mirza, I. R., Mitra, P., Moccia, S., Mohanty, G. B., Monti, F., Moortgat, F., Murthy, S., Music, J., Musienko, Y., Nabili, S., Nayak, S., Nelson, J. W., Nema, A., Neutelings, I., Niedziela, J., Nikitenko, A., Noonan, D., Noy, M., Nurdan, K., Obraztsov, S., Ochando, C., Ogul, H., Olsson, J., Onel, Y., Ozkorucuklu, S., Paganis, E., Palit, P., Pan, R., Pandey, S., Pantaleo, F., Papageorgakis, C., Paramesvaran, S., Paranjpe, M. M., Parolia, S., Parsons, A. G., Parygin, P., Paulini, M., Paus, C., Peñaló, K., Pedro, K., Pekic, V., Peltola, T., Peng, B., Perego, A., Perini, D., Petrilli, A., Pham, H., Pierre-Emile, T., Podem, S. K., Popov, V., Portales, L., Potok, O., Pradeep, P. B., Pramanik, R., Prosper, H., Prvan, M., Qasim, S. R., Qu, H., Quast, T., Trivino, A. Quiroga, Rabour, L., Raicevic, N., Rajpoot, H., Rao, M. A., Rapacz, K., Redjeb, W., Reinecke, M., Revering, M., Roberts, A., Rohlf, J., Rosado, P., Rose, A., Rothman, S., Rout, P. K., Rovere, M., Rumerio, P., Rusack, R., Rygaard, L., Ryjov, V., Sadivnycha, S., Sahin, M. Ö., Sakarya, U., Salerno, R., Saradhy, R., Saraf, M., Sarbandi, K., Sarkisla, M. A., Satyshev, I., Saud, N., Sauvan, J., Schindler, G., Schmidt, A., Schmidt, I., Schmitt, M. H., Sculac, A., Sculac, T., Sedelnikov, A., Seez, C., Sefkow, F., Selivanova, D., Selvaggi, M., Sergeychik, V., Sert, H., Shahid, M., Sharma, P., Sharma, R., Sharma, S., Shelake, M., Shenai, A., Shih, C. W., Shinde, R., Shmygol, D., Shukla, R., Sicking, E., Silva, P., Simsek, C., Simsek, E., Sirasva, B. K., Sirois, Y., Song, S., Song, Y., Soudais, G., Sriram, S., StJacques, R. R., StahlLeiton, A. G., Steen, A., Stein, J., Strait, J., Strobbe, N., Su, X., Sukhov, E., Suleiman, A., Cerci, D. Sunar, Suryadevara, P., Swain, K., Syal, C., Tali, B., Tanay, K., Tang, W., Tanvir, A., Tao, J., Tarabini, A., Tatli, T., Taylor, R., Taysi, Z. C., Teafoe, G., Tee, C. Z., Terrill, W., Thienpont, D., Thomas, R., Titov, M., Todd, C., Todd, E., Toms, M., Tosun, A., Troska, J., Tsai, L., Tsamalaidze, Z., Tsionou, D., Tsipolitis, G., Tsirigoti, M., Tu, R., Polat, S. N. Tural, Undleeb, S., Usai, E., Uslan, E., Ustinov, V., Vernazza, E., Viahin, O., Viazlo, O., Vichoudis, P., Vijay, A., Virdee, T., Voirin, E., Vojinovic, M., Voytishin, N., Vámi, T. Á., Wade, A., Walter, D., Wang, C., Wang, F., Wang, J., Wang, K., Wang, X., Wang, Y., Wang, Z., Wanlin, E., Wayne, M., Wetzel, J., Whitbeck, A., Wickwire, R., Wilmot, D., Wilson, J., Wu, H., Xiao, M., Yang, J., Yazici, B., Ye, Y., Yetkin, T., Yi, R., Yohay, R., Yu, T., Yuan, C., Yuan, X., Yuksel, O., YushmanoV, I., Yusuff, I., Zabi, A., Zareckis, D., Zarubin, A., Zehetner, P., Zghiche, A., Zhang, C., Zhang, D., Zhang, H., Zhang, J., Zhang, Z., Zhao, X., Zhong, J., Zhou, Y., and Zorbilmez, Ç.
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Physics - Instrumentation and Detectors ,High Energy Physics - Experiment ,Physics - Data Analysis, Statistics and Probability - Abstract
A novel method to reconstruct the energy of hadronic showers in the CMS High Granularity Calorimeter (HGCAL) is presented. The HGCAL is a sampling calorimeter with very fine transverse and longitudinal granularity. The active media are silicon sensors and scintillator tiles readout by SiPMs and the absorbers are a combination of lead and Cu/CuW in the electromagnetic section, and steel in the hadronic section. The shower reconstruction method is based on graph neural networks and it makes use of a dynamic reduction network architecture. It is shown that the algorithm is able to capture and mitigate the main effects that normally hinder the reconstruction of hadronic showers using classical reconstruction methods, by compensating for fluctuations in the multiplicity, energy, and spatial distributions of the shower's constituents. The performance of the algorithm is evaluated using test beam data collected in 2018 prototype of the CMS HGCAL accompanied by a section of the CALICE AHCAL prototype. The capability of the method to mitigate the impact of energy leakage from the calorimeter is also demonstrated., Comment: Prepared for submission to JINST
- Published
- 2024
17. Headgear mandates in high school girls lacrosse: investigating differences in impact rates and game play behaviors.
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Caswell, Shane, Kelshaw, Patricia, Hacherl, Samantha, Lincoln, Andrew, and Herman, Daniel
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Concussion ,females ,helmets ,policy ,risk-compensation ,Humans ,Female ,Racquet Sports ,Adolescent ,Head Protective Devices ,Florida ,Schools ,Athletic Injuries ,Brain Concussion ,Craniocerebral Trauma - Abstract
BACKGROUND/OBJECTIVE: Headgear designed to protect girls lacrosse athletes is widely available and permitted for voluntary use; however, it remains unknown how policies mandating headgear use may change the sport and, particularly regarding impacts during game-play. Therefore, this study compares the impact rates and game play characteristics of girls high school lacrosse in Florida which mandates headgear use (HM), with states having no headgear mandate (NHM). MATERIALS AND METHODS: Video from 189 randomly-selected games (HM: 64, NHM: 125) were analyzed. Descriptive statistics, Impact Rates (IR), Impact Rate Ratios (IRR), Impact Proportion Ratios (IPR), and 95% Confidence Intervals (CI) were calculated. IRRs and IPRs with corresponding CIs that excluded 1.00 were deemed statistically significant. RESULTS: 16,340 impacts (HM:5,821 NHM: 10,519; 86.6 impacts/game, CI: 88.6-93.3) were identified using the Lacrosse Incident Analysis Instrument (LIAI). Most impacts directly struck the body (n = 16,010, 98%). A minority of impacts directly struck a players head (n = 330, 2%). The rate of head impacts was significantly higher in the HM cohort than NHM cohort (IRR = 2.1; 95% CI = 1.7-2.6). Most head impacts (n = 271, 82%) were caused by stick contact in both groups. There was no difference in the proportion of penalties administered for head impacts caused by stick contact between the HM and NHM cohorts (IPR IRRHM/NHM = 0.98; CI = 0.79-1.16). However, there was a significantly greater proportion of head impacts caused by player contact that resulted in a penalty administered in the HM cohort (IPR = 1.44 CI = 1.17-1.54). CONCLUSION: These findings demonstrate that mandating headgear use was associated with a two-fold greater likelihood of sustaining a head impact during game play compared to NHM states. A majority of head impacts in both HM and NHM states were caused by illegal stick contact that did not result in penalty.
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- 2024
18. Harnessing Male Peer Networks to Enhance Engagement With HIV Prevention (IMPERATIVE)
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Biomedical Research and Training Institute, Zimbabwe, Imperial College London, University of Lincoln, University College London Hospitals, University of Copenhagen, University of Washington, Heidelberg University, and Frank Tanser, Professor
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- 2024
19. Promoting Prosocial Bystander Behavior in Intoxicated Men: Evaluation of RealConsent2.0
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University of Nebraska Lincoln and Laura F Salazar, Multiple Principal Investigator
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- 2024
20. Effects of Wind Speed on Size-Dependent Morphology and Composition of Sea Spray Aerosols.
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Madawala, Chamika, Molina, Carolina, Kim, Deborah, Gamage, Dilini, Sun, Mengnan, Leibensperger, Raymond, Mehndiratta, Lincoln, Lee, Jennie, Kaluarachchi, Chathuri, Kimble, KeLa, Sandstrom, Greg, Harb, Charbel, Dinasquet, Julie, Malfatti, Francesca, Prather, Kimberly, Deane, Grant, Stokes, M, Lee, Christopher, Slade, Jonathan, Stone, Elizabeth, Grassian, Vicki, and Tivanski, Alexei
- Abstract
Variable wind speeds over the ocean can have a significant impact on the formation mechanism and physical-chemical properties of sea spray aerosols (SSA), which in turn influence their climate-relevant impacts. Herein, for the first time, we investigate the effects of wind speed on size-dependent morphology and composition of individual nascent SSA generated from wind-wave interactions of natural seawater within a wind-wave channel as a function of size and their particle-to-particle variability. Filter-based thermal optical analysis, atomic force microscopy (AFM), AFM infrared spectroscopy (AFM-IR), and scanning electron microscopy (SEM) were employed in this regard. This study focuses on SSA with sizes within 0.04-1.8 μm generated at two wind speeds: 10 m/s, representing a wind lull scenario over the ocean, and 19 m/s, indicative of the wind speeds encountered in stormy conditions. Filter-based measurements revealed a reduction of the organic mass fraction as the wind speed increases. AFM imaging at 20% relative humidity of individual SSA identified six main morphologies: prism-like, rounded, core-shell, rod, rod inclusion core-shell, and aggregates. At 10 m/s, most SSA were rounded, while at 19 m/s, core-shells became predominant. Based on AFM-IR, rounded SSA at both wind speeds had similar composition, mainly composed of aliphatic and oxygenated species, whereas the shells of core-shells displayed more oxygenated organics at 19 m/s and more aliphatic organics at 10 m/s. Collectively, our observations can be attributed to the disruption of the sea surface microlayer film structure at higher wind speeds. The findings reveal a significant impact of wind speed on morphology and composition of SSA, which should be accounted for accurate assessment of their climate effects.
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- 2024
21. Introduction
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Boyer, T, Blunden, J, Dunn, RJH, Ades, Melanie, Adler, Robert, Adusumilli, Susheel, Agyakwah, W, Ahmadpour, Somayeh, Aldeco, Laura S, Alexander, Michael A, Alexe, Mihai, Alfaro, Eric J, Allan, Richard P, Allgood, Adam, Alves, Lincoln M, Amador, Jorge A, Amaya, Dillon J, Amory, Charles, Anderson, John, Andrade, B, Andreassen, Liss Marie, Anneville, Orlane, Aono, Yasuyuki, Arguez, Anthony, Armenteras Pascual, Dolores, Arosio, Carlo, Asher, Elizabeth, Augustine, John A, Avalos, Grinia, Azorin-Molina, Cesar, Baez-Villanueva, Oscar M, Baiman, Rebecca, Ballinger, Thomas J, Banwell, Alison F, Bardin, M Yu, Barichivich, J, Barreira, Sandra, Beadling, Rebecca L, Beauchemin, Marc, Beck, Hylke E, Becker, Emily J, Beckley, Brian, Bekele, E, Bellouin, Nicolas, Benedetti, Angela, Berne, Christine, Berner, Logan T, Bernhard, Germar H, Bhatt, Uma S, Bigalke, Siiri, Bissolli, Peter, Bjerke, Jarle W, Blake, Eric S, Blannin, Josh, Blenkinsop, Stephen, Bochníček, Oliver, Bock, Olivier, Bodin, Xavier, Bonte, Olivier, Bosilovich, Michael G, Boucher, Olivier, Box, Jason E, Bozkurt, Deniz, Brettschneider, Brian, Bringas, Francis G, Brubaker, Mike, Buehler, Stefan A, Bukunt, Brandon, Burgess, David, Butler, Amy H, Byrne, Michael P, Calderón, Blanca, Camargo, Suzana J, Campbell, Jayaka, Campos, Diego, Cappucci, Fabrizio, Carrea, Laura, Carter, Brendan R, Cerveny, Randall, Cetinić, Ivona, Chambers, Don P, Chan, Duo, Chandler, Elise, Chang, Kai-Lan, Charlton, Candice S, Chen, Jack, Chen, Lin, Cheng, Lijing, Cheng, Vincent YS, Chisholm, Lucy, Christiansen, Hanne H, Christy, John R, Chung, Eui-Seok, Ciasto, Laura M, Clarke, Leonardo, Clem, Kyle R, Clingan, Scott, Coelho, Caio AS, Coldewey-Egbers, Melanie, and Colwell, Steve
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Earth Sciences ,Geology ,Climate Action ,Astronomical and Space Sciences ,Atmospheric Sciences ,Physical Geography and Environmental Geoscience ,Meteorology & Atmospheric Sciences ,Atmospheric sciences ,Climate change science - Abstract
Abstract: —J. Blunden and T. Boyer In 2023, La Niña conditions that generally prevailed in the eastern Pacific Ocean from mid-2020 into early 2023 gave way to a strong El Niño by October. Atmospheric concentrations of Earth’s major greenhouse gases—carbon dioxide, methane, and nitrous oxide—all increased to record-high levels. The annual global average carbon dioxide concentration in the atmosphere rose to 419.3±0.1 ppm, which is 50% greater than the pre-industrial level. The growth from 2022 to 2023 was 2.8 ppm, the fourth highest in the record since the 1960s. The combined short-term effects of El Niño and the long-term effects of increasing levels of heat-trapping gases in the atmosphere contributed to new records for many essential climate variables reported here. The annual global temperature across land and oceans was the highest in records dating as far back as 1850, with the last seven months (June–December) having each been record warm. Over land, the globally averaged temperature was also record high. Dozens of countries reported record or near-record warmth for the year, including China and continental Europe as a whole (warmest on record), India and Russia (second warmest), and Canada (third warmest). Intense and widespread heatwaves were reported around the world. In Vietnam, an all-time national maximum temperature record of 44.2°C was observed at Tuong Duong on 7 May, surpassing the previous record of 43.4°C at Huong Khe on 20 April 2019. In Brazil, the air temperature reached 44.8°C in Araçuaí in Minas Gerais on 20 November, potentially a new national record and 12.8°C above normal. The effect of rising temperatures was apparent in the cryosphere, where snow cover extent by June 2023 was the smallest in the 56-year record for North America and seventh smallest for the Northern Hemisphere overall. Heatwaves contributed to the greatest average mass balance loss for Alpine glaciers around the world since the start of the record in 1970. Due to rapid volume loss beginning in 2021, St. Anna Glacier in Switzerland and Ice Worm Glacier in the United States disappeared completely. In August, as a direct result of glacial thinning over the past 20 years, a glacial lake on a tributary of the Mendenhall Glacier in Alaska burst through its ice dam and caused unprecedented flooding on Mendenhall River near Juneau. Across the Arctic, the annual surface air temperature was the fourth highest in the 124-year record, and summer (July–September) was record warm. Smaller-than-normal snow cover extent in May and June contributed to the third-highest average peak tundra greenness in the 24-year record. In September, Arctic minimum sea ice extent was the fifth smallest in the 45-year satellite record. The 17 lowest September extents have all occurred in the last 17 years. In Antarctica, temperatures for much of the year were up to 6°C above average over the Weddell Sea and along coastal Dronning Maud Land. The Antarctic Peninsula also experienced well-above-average temperatures during the 2022/23 melt season, which contributed to its fourth consecutive summer of above-average surface melt. On 21 February, Antarctic sea ice extent and sea ice area both reached all-time lows, surpassing records set just a year earlier. Over the course of the year, new daily record-low sea ice extents were set on 278 days. In some instances, these daily records were set by a large margin, for example, the extent on 6 July was 1.8 million km2 lower than the previous record low for that day. Across the global oceans, the annual sea surface temperature was the highest in the 170-year record, far surpassing the previous record of 2016 by 0.13°C. Daily and monthly records were set from March onward, including an historic-high daily global mean sea surface temperature of 18.99°C recorded on 22 August. Approximately 94% of the ocean surface experienced at least one marine heatwave in 2023, while 27% experienced at least one cold spell. Globally averaged ocean heat content from the surface to 2000-m depth was record high in 2023, increasing at a rate equivalent to ∼0.7 Watts per square meter of energy applied over Earth’s surface. Global mean sea level was also record high for the 12th consecutive year, reaching 101.4 mm above the 1993 average when satellite measurements began, an increase of 8.1±1.5 mm over 2022 and the third highest year-over-year increase in the record. A total of 82 named tropical storms were observed during the Northern and Southern Hemispheres’ storm seasons, below the 1991–2020 average of 87. Hurricane Otis became the strongest landfalling hurricane on record for the west coast of Mexico at 140 kt (72 m s−1), causing at least 52 fatalities and $12–16 billion U.S. dollars in damage. Freddy became the world’s longest-lived tropical cyclones on record, developing into a tropical cyclone on 6 February and finally dissipating on 12 March. Freddy crossed the full width of the Indian Ocean and made one landfall in Madagascar and two in Mozambique. In the Mediterranean Sea—outside of traditional tropical cyclone basins—heavy rains and flooding from Storm Daniel killed more than 4300 people and left more than 8000 missing in Libya. The record-warm temperatures in 2023 created conditions that helped intensify the hydrological cycle. Measurements of total-column water vapor in the atmosphere were the highest on record, while the fraction of cloud area in the sky was the lowest since records began in 1980. The annual global mean precipitation total over land surfaces for 2023 was among the lowest since 1979, but global one-day maximum totals were close to average, indicating an increase in rainfall intensity. In July, record-high areas of land across the globe (7.9%) experienced extreme drought, breaking the previous record of 6.2% in July 2022. Overall, 29.7% of land experienced moderate or worse categories of drought during the year, also a record. Mexico reported its driest (and hottest) year since the start of its record in 1950. In alignment with hot and prolonged dry conditions, Canada experienced its worst national wildfire season on record. Approximately 15 million hectares burned across the country, which was more than double the previous record from 1989. Smoke from the fires were transported far into the United States and even to western European countries. August to October 2023 was the driest three-month period in Australia in the 104-year record. Millions of hectares of bushfires burned for weeks in the Northern Territory. In South America, extreme drought developed in the latter half of the year through the Amazon basin. By the end of October, the Rio Negro at Manaus, a major tributary of the Amazon River, fell to its lowest water level since records began in 1902. The transition from La Niña to El Niño helped bring relief to the prolonged drought conditions in equatorial eastern Africa. However, El Niño along with positive Indian Ocean dipole conditions also contributed to excessive rainfall that resulted in devastating floods over southeastern Ethiopia, Somalia, and Kenya during October to December that displaced around 1.5 million people. On 5 September, the town of Zagora, Greece, broke a national record for highest daily rainfall (754 mm in 21 hours, after which the station ceased reporting) due to Storm Daniel; this one-day accumulation was close to Zagora’s normal annual total.
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- 2024
22. The Canadian VirusSeq Data Portal & Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology
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Gill, Erin E., Jia, Baofeng, Murall, Carmen Lia, Poujol, Raphaël, Anwar, Muhammad Zohaib, John, Nithu Sara, Richardsson, Justin, Hobb, Ashley, Olabode, Abayomi S., Lepsa, Alexandru, Duggan, Ana T., Tyler, Andrea D., N'Guessan, Arnaud, Kachru, Atul, Chan, Brandon, Yoshida, Catherine, Yung, Christina K., Bujold, David, Andric, Dusan, Su, Edmund, Griffiths, Emma J., Van Domselaar, Gary, Jolly, Gordon W., Ward, Heather K. E., Feher, Henrich, Baker, Jared, Simpson, Jared T., Uddin, Jaser, Ragoussis, Jiannis, Eubank, Jon, Fritz, Jörg H., Gálvez, José Héctor, Fang, Karen, Cullion, Kim, Rivera, Leonardo, Xiang, Linda, Croxen, Matthew A., Shiell, Mitchell, Prystajecky, Natalie, Quirion, Pierre-Olivier, Bajari, Rosita, Rich, Samantha, Mubareka, Samira, Moreira, Sandrine, Cain, Scott, Sutcliffe, Steven G., Kraemer, Susanne A., Joly, Yann, Alturmessov, Yelizar, consortium, CPHLN, consortium, CanCOGeN, Academic, VirusSeq Data Portal, network, Health, Fiume, Marc, Snutch, Terrance P., Bell, Cindy, Lopez-Correa, Catalina, Hussin, Julie G., Joy, Jeffrey B., Colijn, Caroline, Gordon, Paul M. K., Hsiao, William W. L., Poon, Art F. Y., Knox, Natalie C., Courtot, Mélanie, Stein, Lincoln, Otto, Sarah P., Bourque, Guillaume, Shapiro, B. Jesse, and Brinkman, Fiona S. L.
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Quantitative Biology - Genomics - Abstract
The COVID-19 pandemic led to a large global effort to sequence SARS-CoV-2 genomes from patient samples to track viral evolution and inform public health response. Millions of SARS-CoV-2 genome sequences have been deposited in global public repositories. The Canadian COVID-19 Genomics Network (CanCOGeN - VirusSeq), a consortium tasked with coordinating expanded sequencing of SARS-CoV-2 genomes across Canada early in the pandemic, created the Canadian VirusSeq Data Portal, with associated data pipelines and procedures, to support these efforts. The goal of VirusSeq was to allow open access to Canadian SARS-CoV-2 genomic sequences and enhanced, standardized contextual data that were unavailable in other repositories and that meet FAIR standards (Findable, Accessible, Interoperable and Reusable). The Portal data submission pipeline contains data quality checking procedures and appropriate acknowledgement of data generators that encourages collaboration. Here we also highlight Duotang, a web platform that presents genomic epidemiology and modeling analyses on circulating and emerging SARS-CoV-2 variants in Canada. Duotang presents dynamic changes in variant composition of SARS-CoV-2 in Canada and by province, estimates variant growth, and displays complementary interactive visualizations, with a text overview of the current situation. The VirusSeq Data Portal and Duotang resources, alongside additional analyses and resources computed from the Portal (COVID-MVP, CoVizu), are all open-source and freely available. Together, they provide an updated picture of SARS-CoV-2 evolution to spur scientific discussions, inform public discourse, and support communication with and within public health authorities. They also serve as a framework for other jurisdictions interested in open, collaborative sequence data sharing and analyses.
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- 2024
23. On Stability and Denominators of F-pure thresholds in Families of Diagonal Hypersurfaces
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Chua, Gari Lincoln
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Mathematics - Commutative Algebra ,Mathematics - Algebraic Geometry ,13A35, 14B05, 13P99 - Abstract
Given a prime number $p$ and a positive integer $m$, we provide a family of diagonal hypersurfaces $\{ f_n \}_{n = 1}^{\infty}$ in $m$ variables, for which the denominator of $\text{ fpt } (f_{n})$ (in lowest terms) is always $p$ and whose $F$-pure thresholds stabilize after a certain $n$. We also provide another family of diagonal hypersurfaces $\{ g_n \}_{n = 1}^{\infty}$ in $m$ variables, for which the power of $p$ in the denominator of $\text{ fpt } (g_{n})$ (in lowest terms) diverges to $\infty$ as $n \to \infty$. This behavior of the denominator of the $F$-pure thresholds is dependent on the congruence class of $p$ modulo the smallest two exponents of $\{ f_n \}$ and $\{ g_n \}$., Comment: 6 pages, comments welcome!
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- 2024
24. Integrability of Goldilocks quantum cellular automata
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Hillberry, Logan E., Piroli, Lorenzo, Vernier, Eric, Halpern, Nicole Yunger, Prosen, Tomaž, and Carr, Lincoln D.
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Quantum Physics ,Condensed Matter - Statistical Mechanics - Abstract
Goldilocks quantum cellular automata (QCA) have been simulated on quantum hardware and produce emergent small-world correlation networks. In Goldilocks QCA, a single-qubit unitary is applied to each qubit in a one-dimensional chain subject to a balance constraint: a qubit is updated if its neighbors are in opposite basis states. Here, we prove that a subclass of Goldilocks QCA -- including the one implemented experimentally -- map onto free fermions and therefore can be classically simulated efficiently. We support this claim with two independent proofs, one involving a Jordan--Wigner transformation and one mapping the integrable six-vertex model to QCA. We compute local conserved quantities of these QCA and predict experimentally measurable expectation values. These calculations can be applied to test large digital quantum computers against known solutions. In contrast, typical Goldilocks QCA have equilibration properties and quasienergy-level statistics that suggest nonintegrability. Still, the latter QCA conserve one quantity useful for error mitigation. Our work provides a parametric quantum circuit with tunable integrability properties with which to test quantum hardware., Comment: 7 pages (3 figures) + appendices (8 pages)
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- 2024
25. Towards Single Slot Finality: Evaluating Consensus Mechanisms and Methods for Faster Ethereum Finality
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Murr, Lincoln
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Computer Science - Distributed, Parallel, and Cluster Computing - Abstract
Ethereum's current Gasper consensus mechanism, which combines the Latest Message Driven Greediest Heaviest Observed SubTree (LMD-GHOST) fork choice rule with the probabilistic Casper the Friendly Finality Gadget (FFG) finality overlay, finalizes transactions in 64 to 95 blocks, an approximate 15-minute delay. This finalization latency impacts user experience and exposes the network to short-term chain reorganization risks, potentially enabling transaction censorship or frontrunning by validators without severe penalties. As the ecosystem pursues a rollup-centric roadmap to scale Ethereum into a secure global settlement layer, faster finality allows cross-layer and inter-rollup communication with greater immediacy, reducing capital inefficiencies. Single slot finality (SSF), wherein transactions are finalized within the same slot they are proposed, promises to advance the Ethereum protocol and enable better user experiences by enabling near-instant economic finality. This thesis systematically studies distributed consensus protocols through propose-vote-merge, PBFT-inspired, and graded agreement families - scrutinizing their capacities to enhance or replace LMD-GHOST. The analysis delves into the intricate tradeoffs between safety, liveness, and finality, shedding light on the challenges and opportunities in designing an optimal consensus protocol for Ethereum. It also explores different design decisions and mechanisms by which single slot or fast finality can be enabled, including cumulative finality, subsampling, and application-layer fast finality. Furthermore, this work introduces SSF-enabled and streamlined fast finality constructions based on a single-vote total order broadcast protocol. The insights and recommendations in this thesis provide a solid foundation for the Ethereum community to make informed decisions regarding the future direction of the protocol's consensus.
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- 2024
26. Spatial-Temporal Graph Representation Learning for Tactical Networks Future State Prediction
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Liu, Junhua, Albrethsen, Justin, Goh, Lincoln, Yau, David, and Lim, Kwan Hui
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Computer Science - Machine Learning ,Computer Science - Social and Information Networks - Abstract
Resource allocation in tactical ad-hoc networks presents unique challenges due to their dynamic and multi-hop nature. Accurate prediction of future network connectivity is essential for effective resource allocation in such environments. In this paper, we introduce the Spatial-Temporal Graph Encoder-Decoder (STGED) framework for Tactical Communication Networks that leverages both spatial and temporal features of network states to learn latent tactical behaviors effectively. STGED hierarchically utilizes graph-based attention mechanism to spatially encode a series of communication network states, leverages a recurrent neural network to temporally encode the evolution of states, and a fully-connected feed-forward network to decode the connectivity in the future state. Through extensive experiments, we demonstrate that STGED consistently outperforms baseline models by large margins across different time-steps input, achieving an accuracy of up to 99.2\% for the future state prediction task of tactical communication networks.
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- 2024
27. Exploring Multiscale Quantum Media: High-Precision Efficient Numerical Solution of the Fractional Schr\'odinger equation, Eigenfunctions with Physical Potentials, and Fractionally-Enhanced Quantum Tunneling
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Lewis, Joshua M. and Carr, Lincoln D.
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Quantum Physics - Abstract
Fractional evolution equations lack generally accessible and well-converged codes excepting anomalous diffusion. A particular equation of strong interest to the growing intersection of applied mathematics and quantum information science and technology is the fractional Schr\"odinger equation, which describes sub-and super-dispersive behavior of quantum wavefunctions induced by multiscale media. We derive a computationally efficient sixth-order split-step numerical method to converge the eigenfunctions of the FSE to arbitrary numerical precision for arbitrary fractional order derivative. We demonstrate applications of this code to machine precision for classic quantum problems such as the finite well and harmonic oscillator, which take surprising twists due to the non-local nature of the fractional derivative. For example, the evanescent wave tails in the finite well take a Mittag-Leffer-like form which decay much slower than the well-known exponential from integer-order derivative wave theories, enhancing penetration into the barrier and therefore quantum tunneling rates. We call this effect \emph{fractionally enhanced quantum tunneling}. This work includes an open source code for communities from quantum experimentalists to applied mathematicians to easily and efficiently explore the solutions of the fractional Schr\"odinger equation in a wide variety of practical potentials for potential realization in quantum tunneling enhancement and other quantum applications.
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- 2024
28. Engaging Families during the Pre-K to Kindergarten Transition. Educator Practice Guide
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Early Learning Network at the University of Nebraska-Lincoln
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Children's early school experiences shape their learning in future years. The transition from pre-kindergarten, or pre-K, to kindergarten is particularly important. This critical time builds the foundation for children's academic, behavioral and social-emotional skills, as well as families' relationships with their child's teachers for years to come. Parent engagement in pre-K, including participating in learning activities at home and collaborating with their child's teacher, plays a significant role in their overall school readiness and success. It is essential for families and educators to work together consistently and proactively to support students as they navigate this transition. Family-school connections are especially important in easing anxiety and supporting students during times of uncertainty, such as those caused by the pandemic. This guide presents engaging families during the pre-K to kindergarten transition.
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- 2024
29. Projected changes in the frequency of compound hot and dry events over Tropical Brazil in CORDEX-CORE simulations
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Alves, Lincoln Muniz, Firpo, Mári Ândrea Feldman, Bettolli, Maria Laura, Hasson, Shabeh ul, Guerron, Oscar V. Chimborazo, Añazco, Alex Avilés, and Llopart, Marta Pereira
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- 2024
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30. Distinct immune profiles and clinical outcomes in sepsis subphenotypes based on temperature trajectories
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Bhavani, Sivasubramanium V., Spicer, Alexandra, Sinha, Pratik, Malik, Albahi, Lopez-Espina, Carlos, Schmalz, Lee, Watson, Gregory L., Bhargava, Akhil, Khan, Shah, Urdiales, Dennys, Updike, Lincoln, Dagan, Alon, Davila, Hugo, Demarco, Carmen, Evans, Neil, Gosai, Falgun, Iyer, Karthik, Kurtzman, Niko, Palagiri, Ashok V., Sims, Matthew, Smith, Scott, Syed, Anwaruddin, Sarma, Deesha, Reddy, Jr., Bobby, Verhoef, Philip A., and Churpek, Matthew M.
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- 2024
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31. Genotypic and phenotypic characterization of the first Latin America isolates of Corynebacterium rouxii, a recently described member of the Corynebacterium diphtheriae complex reported in Europe
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de Oliveira Sant’Anna, Lincoln, dos Santos, Louisy Sanches, Ramos, Juliana Nunes, Bokermann, Sérgio, Bernardes Sousa, Mireille Ângela, Prates, Fernanda Diniz, Mattos-Guaraldi, Ana Luíza, Vieira, Verônica Viana, and Araújo, Max Roberto Batista
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- 2024
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32. Optimizing UAV Hyperspectral Imaging for Predictive Analysis of Nutrient Concentrations, Biomass Growth, and Yield Prediction of Potatoes
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Sharma, Ayush K., Sidhu, Simranpreet Kaur, Singh, Aditya, Zotarelli, Lincoln, and Sharma, Lakesh K.
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- 2024
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33. Correction: Comprehensive genomic profiling of ESR1, PIK3CA, AKT1, and PTEN in HR(+)HER2(−) metastatic breast cancer: prevalence along treatment course and predictive value for endocrine therapy resistance in real-world practice
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Bhave, Manali A., Quintanilha, Julia C. F., Tukachinsky, Hanna, Li, Gerald, Scott, Takara, Ross, Jeffrey S., Pasquina, Lincoln, Huang, Richard S. P., McArthur, Heather, Levy, Mia A., Graf, Ryon P., and Kalinsky, Kevin
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- 2024
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34. An analysis of the predictive factors for stone clearance at primary ureteroscopy
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Daly, K. F., Mac Curtain, B. M, Collins, E., Lincoln, M., MacCraith, E., Lennon, G., and McGuire, B. B.
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- 2024
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35. Comprehensive genomic profiling of ESR1, PIK3CA, AKT1, and PTEN in HR(+)HER2(−) metastatic breast cancer: prevalence along treatment course and predictive value for endocrine therapy resistance in real-world practice
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Bhave, Manali A., Quintanilha, Julia C. F., Tukachinsky, Hanna, Li, Gerald, Scott, Takara, Ross, Jeffrey S., Pasquina, Lincoln, Huang, Richard S. P., McArthur, Heather, Levy, Mia A., Graf, Ryon P., and Kalinsky, Kevin
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- 2024
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36. Cardioneuroablation for the management of neurally mediated syncope, sinus bradycardia, and atrioventricular block
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Skeete, Jamario, Gordon, Jonathan S., Kavinksy, Lincoln, Huang, Henry D., and Aksu, Tolga
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- 2024
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37. Plant “intelligence” and the misuse of historical sources as evidence
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Kingsland, Sharon E. and Taiz, Lincoln
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- 2024
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38. MYCOLICIBACTERIUM FORTUITUM INFECTION IN EX SITU EMERALD TREE BOA (Corallus batesii)
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Gonzaga, Cássia Regina Ramos, Matos, Flora Nogueira, Caiaffa, Mayara Grego, Silva, Maraya Lincoln, Teixeira, Rodrigo Hidalgo Friciello, Ferreira-Machado, Eduardo, Ervedosa, Ticiana Brasil, Navas-Suárez, Pedro Enrique, Ressio, Rodrigo Albergaria, dos Santos Cirqueira, Cinthya, Figueiredo, Ketlyn Bolsachini, de Carvalho, Ana Carolina Souza Ramos, Guerra, Juliana Mariotti, de Azevedo Fernandes, Natália Coelho Couto, and da Costa, André Luiz Mota
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- 2024
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39. In Vivo Three-Dimensional Geometric Reconstruction of the Mouse Aortic Heart Valve
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Gramling, Daniel P., van Veldhuisen, Aletea L., Damen, Frederick W., Thatcher, Kaitlyn, Liu, Felix, McComb, David, Lincoln, Joy, Breuer, Christopher K., Goergen, Craig J., and Sacks, Michael S.
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- 2024
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40. Family Connections: Cultural Adaptation and Feasibility Testing for Rural Latino Communities
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National Institute of General Medical Sciences (NIGMS) and University of Nebraska Lincoln
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- 2024
41. Impact of ICCAN on Cancer Treatment Completion and Quality of Life
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National Cancer Institute (NCI), The City College of New York, Ralph Lauren Center for Cancer Care and Prevention, Lincoln Medical and Mental Health Center, and Lutheran Medical Center
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- 2024
42. HumanEval on Latest GPT Models -- 2024
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Li, Daniel and Murr, Lincoln
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Computer Science - Computation and Language ,Computer Science - Artificial Intelligence ,Computer Science - Machine Learning - Abstract
In 2023, we are using the latest models of GPT-4 to advance program synthesis. The large language models have significantly improved the state-of-the-art for this purpose. To make these advancements more accessible, we have created a repository that connects these models to Huamn Eval. This dataset was initally developed to be used with a language model called CODEGEN on natural and programming language data. The utility of these trained models is showcased by demonstrating their competitive performance in zero-shot Python code generation on HumanEval tasks compared to previous state-of-the-art solutions. Additionally, this gives way to developing more multi-step paradigm synthesis. This benchmark features 160 diverse problem sets factorized into multistep prompts that our analysis shows significantly improves program synthesis over single-turn inputs. All code is open source at https://github.com/daniel442li/gpt-human-eval .
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- 2024
43. Psychotherapy Intervention for Latinos With Advanced Cancer
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Lincoln Medical and Mental Health Center
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- 2024
44. Integrative common and rare variant analyses provide insights into the genetic architecture of liver cirrhosis.
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Ghouse, Jonas, Sveinbjörnsson, Gardar, Vujkovic, Marijana, Seidelin, Anne-Sofie, Gellert-Kristensen, Helene, Ahlberg, Gustav, Tragante, Vinicius, Rand, Søren, Brancale, Joseph, Vilarinho, Silvia, Lundegaard, Pia, Sørensen, Erik, Erikstrup, Christian, Bruun, Mie, Jensen, Bitten, Brunak, Søren, Banasik, Karina, Ullum, Henrik, Verweij, Niek, Lotta, Luca, Baras, Aris, Mirshahi, Tooraj, Carey, David, Kaplan, David, Lynch, Julie, Morgan, Timothy, Schwantes-An, Tae-Hwi, Dochtermann, Daniel, Pyarajan, Saiju, Tsao, Philip, Laisk, Triin, Mägi, Reedik, Kozlitina, Julia, Tybjærg-Hansen, Anne, Jones, David, Knowlton, Kirk, Nadauld, Lincoln, Ferkingstad, Egil, Björnsson, Einar, Ulfarsson, Magnus, Sturluson, Árni, Sulem, Patrick, Pedersen, Ole, Ostrowski, Sisse, Gudbjartsson, Daniel, Stefansson, Kari, Olesen, Morten, Chang, Kyong-Mi, Holm, Hilma, Bundgaard, Henning, and Stender, Stefan
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Humans ,Liver Cirrhosis ,Genome-Wide Association Study ,Genetic Predisposition to Disease ,Liver Neoplasms ,Carcinoma ,Hepatocellular ,Alanine Transaminase ,Polymorphism ,Single Nucleotide ,Male ,Lipase ,Female ,gamma-Glutamyltransferase ,Membrane Proteins ,Cohort Studies ,Case-Control Studies ,Multifactorial Inheritance ,Risk Factors ,Genetic Variation - Abstract
We report a multi-ancestry genome-wide association study on liver cirrhosis and its associated endophenotypes, alanine aminotransferase (ALT) and γ-glutamyl transferase. Using data from 12 cohorts, including 18,265 cases with cirrhosis, 1,782,047 controls, up to 1 million individuals with liver function tests and a validation cohort of 21,689 cases and 617,729 controls, we identify and validate 14 risk associations for cirrhosis. Many variants are located near genes involved in hepatic lipid metabolism. One of these, PNPLA3 p.Ile148Met, interacts with alcohol intake, obesity and diabetes on the risk of cirrhosis and hepatocellular carcinoma (HCC). We develop a polygenic risk score that associates with the progression from cirrhosis to HCC. By focusing on prioritized genes from common variant analyses, we find that rare coding variants in GPAM associate with lower ALT, supporting GPAM as a potential target for therapeutic inhibition. In conclusion, this study provides insights into the genetic underpinnings of cirrhosis.
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- 2024
45. Genetic associations with dementia‐related proteinopathy: Application of item response theory
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Katsumata, Yuriko, Fardo, David W, Shade, Lincoln MP, Wu, Xian, Karanth, Shama D, Hohman, Timothy J, Schneider, Julie A, Bennett, David A, Farfel, Jose M, Gauthreaux, Kathryn, Mock, Charles, Kukull, Walter A, Abner, Erin L, Nelson, Peter T, Carrillo, Maria, Reiman, Eric M, Chen, Kewei, Masterman, Donna, Green, Robert C, Ho, Carole, Fleisher, Adam, Saykin, Andrew J, Nho, Kwangsik, Apostolova, Liana G, Risacher, Shannon L, Jackson, Jonathan, Forghanian-Arani, Arvin, Borowski, Bret, Ward, Chad, Schwarz, Christopher, Jack, Clifford R, Jones, David, Gunter, Jeff, Kantarci, Kejal, Senjem, Matthew, Vemuri, Prashanthi, Reid, Robert, Petersen, Ronald, Hsiao, John K, Potter, William, Masliah, Eliezer, Ryan, Laurie, Bernard, Marie, Silverberg, Nina, Kormos, Adrienne, Conti, Cat, Veitch, Dallas, Flenniken, Derek, Sacrey, Diana Truran, Choe, Mark, Ashford, Miriam, Chen, Stephanie Rossi, Faber, Kelley, Nudelman, Kelly, Wilme, Kristi, Foroud, Tatiana M, Trojanowki, John Q, Shaw, Leslie M, Korecka, Magdalena, Figurski, Michal, Khachaturian, Zaven, Barnes, Lisa, Malone, Ian, Fox, Nick C, Beckett, Laurel, Weiner, Michael W, Jagust, William, Landau, Susan, Knaack, Alexander, DeCarli, Charles, Harvey, Danielle, Fletcher, Evan, González, Hector, Jin, Chengshi, Tosun‐Turgut, Duygu, Neuhaus, John, Fockler, Juliet, Nosheny, Rachel, Koeppe, Robert A, Yushkevich, Paul A, Das, Sandhitsu, Mathis, Chet, Toga, Arthur W, Zimmerman, Caileigh, Gessert, Devon, Shcrer, Elizabeth, Miller, Garrett, Coker, Godfrey, Jimenez, Gustavo, Salazar, Jennifer, Pizzola, Jeremy, Crawford, Karen, Hergesheimer, Lindsey, Donohue, Michael, and Rafii, Michael
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Biomedical and Clinical Sciences ,Biological Psychology ,Clinical Sciences ,Neurosciences ,Psychology ,Acquired Cognitive Impairment ,Neurodegenerative ,Brain Disorders ,Dementia ,Genetics ,Prevention ,Aging ,2.1 Biological and endogenous factors ,Aetiology ,Neurological ,Humans ,alpha-Synuclein ,TDP-43 Proteinopathies ,Proteostasis Deficiencies ,DNA-Binding Proteins ,Biological Products ,Alzheimer Disease ,Membrane Proteins ,Nerve Tissue Proteins ,Alzheimer's Disease Neuroimaging Initiative ,National Alzheimer's Coordinating Center ,ARHGEF28 ,Alzheimer's Coordinating Center ,Alzheimer's Disease Sequencing Project ,Alzheimer's disease neuropathologic changes ,Item response theory ,Lewy ,RGNEF ,Religious Orders Study ,Rush Memory and Aging Project ,SDHAF1 ,TMEM68 ,neuropathology ,Geriatrics ,Clinical sciences ,Biological psychology - Abstract
IntroductionAlthough dementia-related proteinopathy has a strong negative impact on public health, and is highly heritable, understanding of the related genetic architecture is incomplete.MethodsWe applied multidimensional generalized partial credit modeling (GPCM) to test genetic associations with dementia-related proteinopathies. Data were analyzed to identify candidate single nucleotide variants for the following proteinopathies: Aβ, tau, α-synuclein, and TDP-43.ResultsFinal included data comprised 966 participants with neuropathologic and WGS data. Three continuous latent outcomes were constructed, corresponding to TDP-43-, Aβ/Tau-, and α-synuclein-related neuropathology endophenotype scores. This approach helped validate known genotype/phenotype associations: for example, TMEM106B and GRN were risk alleles for TDP-43 pathology; and GBA for α-synuclein/Lewy bodies. Novel suggestive proteinopathy-linked alleles were also discovered, including several (SDHAF1, TMEM68, and ARHGEF28) with colocalization analyses and/or high degrees of biologic credibility.DiscussionA novel methodology using GPCM enabled insights into gene candidates for driving misfolded proteinopathies.HighlightsLatent factor scores for proteinopathies were estimated using a generalized partial credit model. The three latent continuous scores corresponded well with proteinopathy severity. Novel genes associated with proteinopathies were identified. Several genes had high degrees of biologic credibility for dementia risk factors.
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- 2024
46. Oncogenic ETS fusions promote DNA damage and proinflammatory responses via pericentromeric RNAs in extracellular vesicles.
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Ruzanov, Peter, Evdokimova, Valentina, Pachva, Manideep, Minkovich, Alon, Zhang, Zhenbo, Langman, Sofya, Gassmann, Hendrik, Thiel, Uwe, Orlic-Milacic, Marija, Zaidi, Syed, Peltekova, Vanya, Heisler, Lawrence, Sharma, Manju, Cox, Michael, McKee, Trevor, Zaidi, Mark, Lapouble, Eve, Delattre, Olivier, Radvanyi, Laszlo, Burdach, Stefan, Stein, Lincoln, Sorensen, Poul, and Mcpherson, John
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Inflammation ,Innate immunity ,Humans ,Extracellular Vesicles ,DNA Damage ,Oncogene Proteins ,Fusion ,Transcriptional Regulator ERG ,Male ,RNA-Binding Protein EWS ,Proto-Oncogene Protein c-fli-1 ,Sarcoma ,Ewing ,Cell Line ,Tumor ,RNA ,Neoplasm ,Inflammation ,Prostatic Neoplasms ,Mice ,Animals ,Heterochromatin - Abstract
Aberrant expression of the E26 transformation-specific (ETS) transcription factors characterizes numerous human malignancies. Many of these proteins, including EWS:FLI1 and EWS:ERG fusions in Ewing sarcoma (EwS) and TMPRSS2:ERG in prostate cancer (PCa), drive oncogenic programs via binding to GGAA repeats. We report here that both EWS:FLI1 and ERG bind and transcriptionally activate GGAA-rich pericentromeric heterochromatin. The respective pathogen-like HSAT2 and HSAT3 RNAs, together with LINE, SINE, ERV, and other repeat transcripts, are expressed in EwS and PCa tumors, secreted in extracellular vesicles (EVs), and are highly elevated in plasma of patients with EwS with metastatic disease. High human satellite 2 and 3 (HSAT2,3) levels in EWS:FLI1- or ERG-expressing cells and tumors were associated with induction of G2/M checkpoint, mitotic spindle, and DNA damage programs. These programs were also activated in EwS EV-treated fibroblasts, coincident with accumulation of HSAT2,3 RNAs, proinflammatory responses, mitotic defects, and senescence. Mechanistically, HSAT2,3-enriched cancer EVs induced cGAS-TBK1 innate immune signaling and formation of cytosolic granules positive for double-strand RNAs, RNA-DNA, and cGAS. Hence, aberrantly expressed ETS proteins derepress pericentromeric heterochromatin, yielding pathogenic RNAs that transmit genotoxic stress and inflammation to local and distant sites. Monitoring HSAT2,3 plasma levels and preventing their dissemination may thus improve therapeutic strategies and blood-based diagnostics.
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- 2024
47. On the approximability of random-hypergraph MAX-3-XORSAT problems with quantum algorithms
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Kapit, Eliot, Barton, Brandon A., Feeney, Sean, Grattan, George, Patnaik, Pratik, Sagal, Jacob, Carr, Lincoln D., and Oganesyan, Vadim
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Quantum Physics ,Condensed Matter - Statistical Mechanics - Abstract
A canonical feature of the constraint satisfaction problems in NP is approximation hardness, where in the worst case, finding sufficient-quality approximate solutions is exponentially hard for all known methods. Fundamentally, the lack of any guided local minimum escape method ensures both exact and approximate classical approximation hardness, but the equivalent mechanism(s) for quantum algorithms are poorly understood. For algorithms based on Hamiltonian time evolution, we explore this question through the prototypically hard MAX-3-XORSAT problem class. We conclude that the mechanisms for quantum exact and approximation hardness are fundamentally distinct. We review known results from the literature, and identify mechanisms that make conventional quantum methods (such as Adiabatic Quantum Computing) weak approximation algorithms in the worst case. We construct a family of spectrally filtered quantum algorithms that escape these issues, and develop analytical theories for their performance. We show that, for random hypergraphs in the approximation-hard regime, if we define the energy to be $E = N_{\mathrm{unsat}}-N_{\mathrm{sat}}$, spectrally filtered quantum optimization will return states with $E \leq q_m E_{\mathrm{GS}}$ (where $E_{\rm GS}$ is the ground state energy) in sub-quadratic time, where conservatively, $q_m \simeq 0.59$. This is in contrast to $q_m \to 0$ for the hardest instances with classical searches. We test all of these claims with extensive numerical simulations. We do not claim that this approximation guarantee holds for all possible hypergraphs, though our algorithm's mechanism can likely generalize widely. These results suggest that quantum computers are more powerful for approximate optimization than had been previously assumed., Comment: NOTE: arxiv METADATA abstract abridged compared to the manuscript; 43 pages, 18 figures, 1 table
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- 2023
48. The Strength of Frontline Practice Leadership in Australian Supported Accommodation Services: Challenges Confronting Service Providers
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Christine Bigby and Lincoln Humphreys
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Background: The strength of practice leadership predicts the quality of Active Support but it can be compromised by other demands on frontline managers. The study aimed to identify and understand differences in practice leadership over time and between organisations. Method: Data collected in 2022 in 96 services from 11 organisations using the Observed Measure of Practice Leadership were compared to similar data from 2013 and 2018. Qualitative fieldnotes were analysed thematically. Findings: Practice leadership scores increased significantly between 2013 and 2018 but declined significantly between 2018 and 2022. Scores were significantly higher in organisations that had implemented Active Support since 2013 compared to later adopters. Higher scoring organisations had structures that supported frontline managers with practice leadership and that countered increasing administrative demands. Conclusions: Establishment of support structures for practice leadership by organisations warrants further investigation together with the relative importance of each task of practice leadership.
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- 2024
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49. Experiences and Perceptions of Social Connection Among Minoritized Older Adults With HIV During the COVID-19 Pandemic
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Yoo-Jeong, Moka, Lacroix-Williamson, Lorraine, Mejía, David Salvador Cruz, Yom, Tiana, Kim, Miso, and Lincoln, Alisa K.
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Epidemics -- Influence -- Social aspects -- United States ,Aged patients -- Beliefs, opinions and attitudes -- Social aspects -- Psychological aspects ,Socialization -- Public opinion -- Demographic aspects ,HIV infection -- Demographic aspects -- Social aspects -- Patient outcomes ,Health ,Seniors - Abstract
Purpose: Older people with HIV (OPWH; aged ≥50 years) have unique vulnerabilities to intersecting risks for marginalization and isolation. The current qualitative study explored perceptions of social connection during the coronavirus disease 2019 (COVID-19) pandemic. Method: Purposive sampling was used to recruit participants from two local community-based organizations (CBOs) in the Greater Boston area. Recruitment occurred through dissemination of flyers by staff of the CBOs. Semi-structured interviews were conducted between October 2021 and March 2022. Data were analyzed using thematic analysis. Results: Of 22 participants, most were women (63.6%) and Hispanic/Latinx or African American/Black (86.4%). Participants viewed social connection as an important aspect of well-being, but acknowledged that COVID-19 induced social isolation. There were gender differences in social connection. Technology was adopted by all participants that allowed connection to others. Pre-existing relationships with support groups and CBOs facilitated improved social connection and well-being. Conclusion: Focused attention should be on individuals not linked to CBOs or social services and those who lack access or have barriers to technology use, as they may be at the most significant risk for isolation. [Journal of Gerontological Nursing, xx(xx), xx–xx.], The Joint United Nations Programme on HIV/AIDS Global AIDS Strategy for 95-95-95 set the agenda to end the HIV epidemic, which is that by 2030, 95% of people with HIV [...]
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- 2024
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50. Advanced Imaging of Hepatocellular Carcinoma: A Review of Current and Novel Techniques
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Nguyen, Trinh, Vennatt, Jaijo, Downs, Lincoln, Surabhi, Venkateswar, and Stanietzky, Nir
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- 2024
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