203 results on '"Li, Yun-Chang"'
Search Results
2. Extracting the Semantic Representation of Chinese-Japanese Homophones with Word2Vec for Teaching Chinese as a Second/Foreign Language.
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Min-Chi Lo, Li-Yun Chang, and Hou-Chiang Tseng
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- 2024
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3. Ethical Concerns With Regards to Artificial Intelligence: A National Public Poll in Taiwan.
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Wendy Li-Yun Chang, Shiang-Yao Liu, Ying-Kai Liao, and Tony Szu-Hsieh Lee
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- 2024
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4. Melatonin alleviates endoplasmic reticulum stress to improve ovarian function by regulating the mTOR pathway in aged laying hens
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Er-ying Hao, Xue-lu Liu, Li-yun Chang, Han Xue, Bo-fei Su, Yi-fan Chen, De-he Wang, Lei Shi, and Hui Chen
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chicken ,melatonin ,transcriptome analysis ,granulosa cell ,mTOR signaling pathway ,Animal culture ,SF1-1100 - Abstract
ABSTRACT: Granular cell apoptosis is a key factor leading to follicular atresia and decreased laying rate in aged laying hens. Endoplasmic reticulum stress (ERS) induced cell apoptosis is a new type of apoptosis pathway. Previous studies have shown that the ERS pathway is involved in the regulation of follicular development and atresia, and can be regulated by mTOR. Melatonin (MEL) can protect the normal development of follicles, but the precise mechanism by which MEL regulates follicular development is not yet clear. So, we investigated the potential relationship between MEL and ERS and mTOR signaling pathway in vivo through intraperitoneal injection of MEL in aged laying hens. The results show that the laying rate, ovarian follicle number, plasma MEL, E2, LH, FSH concentrations, as well as the mRNA expression of mTOR signaling-associated genes TSC1, TSC2, mTOR, 4E-BP1, and S6K in old later-period chicken control (Old-CN) group was significantly decreased (P < 0.01). In contrast, the ERS-related of plasma and granular cell layer mRNA expression of Grp78, CHOP, and Caspase-3 was significantly increased (P < 0.01). While both of the effects were reversed by MEL. Then, aging granulosa cells were treated with MEL in vitro, followed by RNA seq analysis, and it was found that 259 and 322 genes were upregulated and downregulated. After performing GO enrichment analysis, it was found that DEGs significantly contribute to the biological processes including cell growth and apoptosis. Using pathway enrichment analysis, we found significant overrepresentation of cellular processes related to mTOR signaling and endoplasmic reticulum (ER) stress, involving genes such as GRB10, SGK1, PRKCA, RPS6KA2, RAF1, PIK3R3, FOXO1, DERL3, HMOX1, TLR7, VAMP7 and INSIG2. The obtained results of RT-PCR showed consistency with the RNA-Seq data. In summary, the underlined results revealed that MEL has significantly contributed to follicular development via activating the mTOR signaling pathway-related genes and alleviating ERS-related genes in laying hens. The current study provides a theoretical background for enhancing the egg-laying capability of hens and also providing a basis for elucidating the molecular mechanism of follicular selection.
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- 2024
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5. Tablet-Based Design Fluency Test: Taiwan Normative Data and Reliability and Validity Study.
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Pei-Zhen Chen, Ching-Lin Wu, Li-Yun Chang, and Hsueh-Chih Chen
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- 2023
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6. The Design and Development of a System for Chinese Character Difficulty and Features.
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Jung-En Haung, Hou-Chiang Tseng, Li-Yun Chang, Hsueh-Chih Chen, and Yao-Ting Sung
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- 2022
7. Antcin K inhibits VCAM-1-dependent monocyte adhesion in human rheumatoid arthritis synovial fibroblasts
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David Achudhan, Sunny Li-Yun Chang, Shan-Chi Liu, Yen-You Lin, Wei-Chien Huang, Yang-Chang Wu, Chien-Chung Huang, Chun-Hao Tsai, Chih-Yuan Ko, Yueh-Hsiung Kuo, and Chih-Hsin Tang
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rheumatoid arthritis ,cell adhesion molecules ,monocytes ,vcam-1 ,cd11b ,antrodia cinnamomea ,antcin k ,Nutrition. Foods and food supply ,TX341-641 - Abstract
Background: Antcin K, an extract of Antrodia cinnamomea (a medicinal mushroom endemic to Taiwan commonly used in Chinese medicine preparations), inhibits proinflammatory cytokine production and angiogenesis in human rheumatoid arthritis synovial fibroblasts (RASFs), major players in RA disease. Antcin K also inhibits disease activity in mice with collagen-induced arthritis (CIA). Up until now, the effects of Antcin K upon cell adhesion molecules (CAMs) were unknown. Methods: RA and healthy synovial tissue samples (n = 10 in each group) were retrieved from the Gene Expression Omnibus (GEO) database (accession code: GDS5401) to compare CAM and monocyte marker expressions. In addition, synovial tissue samples from six RA patients and six patients undergoing arthroscopy for trauma/joint derangement (healthy controls) were subjected to immunohistochemical (IHC) analysis. mRNA and protein expression levels were analyzed in RASFs using RT-qPCR (Reverse transcription-quantitative polymerase chain reaction) and Western blot. RASFs were incubated with Antcin K and examined for monocyte adherence by fluorescence microscopy. Ankle joint tissue specimens from a CIA mouse model and healthy controls were stained with hematoxylin and eosin (H&E) and Safranin-O/Fast Green to examine histological changes and evidence of bone loss. IHC analysis determined levels of vascular cell adhesion molecule 1 (VCAM-1) and CD11b in CIA ankle tissue and clinical synovial tissue. Results: Levels of VCAM-1 expression were higher in the GEO database specimens and the study’s clinical samples of RA synovial tissue compared with the healthy specimens. Antcin K dose-dependently inhibited VCAM-1 expression and monocyte adhesion in RASFs. Antcin K also significantly inhibited levels of VCAM-1 and monocyte CD11b expression in CIA tissue. These effects appeared to be mediated by MEK1/2-ERK, p38, and AP-1 signaling. Conclusions: Antcin K seems promising for the treatment of RA and deserves further investigations.
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- 2022
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8. A Comparative Study on Ethics Guidelines for Artificial Intelligence Across Nations.
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Tony Szu-Hsieh Lee, Shiang-Yao Liu, Yin-Ling Wei, and Li-Yun Chang
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- 2020
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9. Assessing Continuous Epidural Infusion and Programmed Intermittent Epidural Bolus for Their Effectiveness in Providing Labor Analgesia: A Mono-Centric Retrospective Comparative Study
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Shao-Lun Tsao, Wen-Tyng Li, Li-Yun Chang, Pin-Hung Yeh, Liang-Tsai Yeh, Ling-Jun Liu, and Chao-Bin Yeh
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analgesia ,labor pain ,workload ,anesthesia ,epidural ,patient-controlled ,Medicine (General) ,R5-920 - Abstract
Background and Objectives: Local anesthetics administered via epidural catheters have evolved from intermittent top-ups to simultaneous administration of continuous epidural infusion (CEI) and patient-controlled epidural analgesia (PCEA) using the same device. The latest programmed intermittent epidural bolus (PIEB) model is believed to create a wider and more even distribution of analgesia inside the epidural space. The switch from CEI + PCEA to PIEB + PCEA in our department began in 2018; however, we received conflicting feedback regarding workload from the quality assurance team. This study aimed to investigate the benefits and drawbacks of this conversion, including the differences in acute pain service (APS) staff workload, maternal satisfaction, side effects, and complications before and after the changeover. Materials and Methods: Items from the APS records included total delivery time, average local anesthetic dosage, and the formerly mentioned items. The incidence of side effects, the association between the duration of delivery and total dosage, and hourly medication usage in the time subgroups of the CEI and PIEB groups were compared. The staff workload incurred from rescue bolus injection, catheter adjustment, and dosage adjustment was also analyzed. Results: The final analysis included 214 and 272 cases of CEI + PCEA and PIEB + PCEA for labor analgesia, respectively. The total amount of medication and average hourly dosage were significantly lower in the PIEB + PCEA group. The incidences of dosage change, manual bolus, extra visits per patient, and lidocaine use for rescue bolus were greater in the PIEB + PCEA group, indicating an increased staff workload. However, the two groups did not differ in CS rates, labor time, maternal satisfaction, and side effects. Conclusions: This study revealed that while PIEB + PCEA maintained the advantage of decreasing total drug doses, it inadvertently increased the staff burden. Increased workload might be a consideration in clinical settings when choosing between different methods of PCEA.
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- 2023
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10. Chinese Key-Image Learning: An App Designed with Handwriting Evaluation and Instant Feedback to Support Chinese Character Learning.
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Hsueh-Chih Chen, Li-Yun Chang, and Meng-Hua Tsai
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- 2019
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11. The Effect of Visual Mnemonics and the Presentation of Character Pairs on Learning Visually Similar Characters for Chinese-As-Second-Language Learners
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Li-Yun Chang, Yuan-Yuan Tang, Chia-Yun Lee, and Hsueh-Chih Chen
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Chinese-as-second/foreign-language (CSL/CFL) learning ,Chinese orthographic learning ,material presentation ,visual mnemonics ,visually similar characters ,Psychology ,BF1-990 - Abstract
This study investigates the effects of visual mnemonics and the methods of presenting learning materials on learning visually similar characters for Chinese-as-second-language (CSL) learners. In supporting CSL learners to build robust orthographic representations in Chinese, addressing the challenges of visual similarity of characters (e.g., 理 and 埋) is an important issue. Based on prior research on perceptual learning, we tested three strategies that differ in the extent to which they promote interrelated attention to the form and meaning of characters: (1) Stroke Sequence, a form-emphasis strategy, (2) Key-images, a form + meaning strategy utilizing visual code, (3) Pithy Formulas with Key-images, a form + meaning strategy combining visual and verbal codes. A pretest–posttest equivalent-group design was adopted. The independent variables were the learning strategy, the method of presenting character pairs (visually similar vs. dissimilar), and testing time. The dependent variables were learners’ proportions of accurate responses to reading and writing Chinese characters through a posttest (immediately performed after learning) and a delayed posttest (1 week after learning); a learner experience survey was also administered to investigate learners’ opinions on each strategy. Sixty-six non-beginning learners of Chinese participated; they were randomly assigned to one of the two groups in which participants learned ten characters via the three strategies, respectively, differing between whether the characters were presented in similar pairs or dissimilar pairs. Data were analyzed via three-way ANCOVAs. The Pithy Formulas with Key-images and the Key-images generally yielded higher writing accuracy than Stroke Sequence immediately after learning. Notably, the advantage of the Pithy Formulas with Key-images (verbal and visual) over the Key-images (visual) on writing was specific to the participants that learned with visually similar pairs rather than those that learned with dissimilar pairs. All strategies were effective for reading, yet learners’ experience ratings favored the two form + meaning strategies over the strategy that focused primarily on form. Suggestions for future research and pedagogical implications on learning visually similar characters were offered.
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- 2022
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12. Melatonin regulates chicken granulosa cell proliferation and apoptosis by activating the mTOR signaling pathway via its receptors
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Er-ying Hao, De-He Wang, Li-yun Chang, Chen-xuan Huang, Hui Chen, Qiao-xian Yue, Rong-Yan Zhou, and Ren-lu Huang
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melatonin ,chicken granulosa cell ,mTOR signaling pathway ,proliferation ,apoptosis ,Animal culture ,SF1-1100 - Abstract
Melatonin is a key regulator of follicle granular cell maturation and ovulation. The mammalian target of rapamycin (mTOR) pathway plays an important role in cell growth regulation. Therefore, our aim was to investigate whether the mTOR signaling pathway is involved in the regulation of melatonin-mediated proliferation and apoptotic mechanisms in granulosa cells. Chicken follicle granular cells were cultured with melatonin (0, 2, 20, or 200 μmol/L) for 48 h. The results showed that melatonin treatment enhanced proliferation and suppressed apoptosis in granular cells at 20 μmol/L and 200 μmol/L (P < 0.05) by upregulation of cyclin D1 (P < 0.01) and Bcl-2 (P < 0.01) and downregulation of P21, caspase-3, Beclin1, and LC3-II (P < 0.01). The effects resulted in the activation of the mTOR signaling pathway by increasing the expression of avTOR, PKC, 4E-BP1, S6K (P < 0.05), p-mTOR, and p-S6K. We added an mTOR activator and inhibitor to the cells and identified the optimal dose (10 μmol/L MHY1485 and 100 nmol/L rapamycin) for subsequent experiments. The combination of 20 μmol/L melatonin and 10 μmol/L MHY1485 significantly enhanced granulosa cell proliferation (P < 0.05), while 100 nmol/L rapamycin significantly inhibited proliferation and enhanced apoptosis (P < 0.05), but this action was reversed in the 20-μmol/L melatonin and 100-nmol/L rapamycin cotreatment groups (P < 0.05). This was confirmed by mRNA and protein expression that was associated with proliferation, apoptosis, and autophagy (P < 0.05). The combination of 20 μmol/L melatonin and 10 μmol/L MHY1485 also activated the mTOR pathway upstream genes PI3K, AKT1, and AKT2 and downstream genes PKC, 4E-BP1, and S6K (P < 0.05), as well as protein expression of p-mTOR and p-S6K. Rapamycin significantly inhibited the mTOR pathway–related genes mRNA levels (P < 0.05). In addition, activation of the mTOR pathway increased melatonin receptor mRNA levels (P < 0.05). In conclusion, these findings demonstrate that melatonin regulates chicken granulosa cell proliferation and apoptosis by activating the mTOR signaling pathway via its receptor.
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- 2020
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13. Novel Method for the Growth of Two-Dimensional Layered InSe Thin Films on Amorphous Substrate by Molecular Beam Epitaxy
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Sheng-Wei Hsiao, Chu-Shou Yang, Hao-Ning Yang, Chia-Hsing Wu, Ssu-Kuan Wu, Li-Yun Chang, Yen-Teng Ho, Shu-Jui Chang, and Wu-Ching Chou
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2D materials ,indium precursor layer ,molecular beam epitaxy ,Raman scattering spectrum ,x-ray diffraction ,Technology - Abstract
A two-dimensional (2D) material known as indium selenide (InSe) is widely considered a promising layered semiconductor with potential applications in electronics and optoelectronics. However, the single phase of InSe is still a challenge due to the close formation energy of InSe and In2Se3. In this study, we demonstrate a novel growth method for 2D InSe with an indium precursor layer by molecular beam epitaxy. Indium pre-deposited on substrate at room temperature followed by growth of InSe at 550°C can overcome the problem of stoichiometry control and can be applied on amorphous substrate with high quality. According to Raman scattering spectra, X-ray diffraction, and high-resolution transmission electron microscopy results, we find that 2D InSe phase can be facile formed under both indium-rich and -poor conditions. The pre-deposited indium precursor effectively induces replacement with subsequent Se and In atoms to form the InSe phase while suppressing the In2Se3 phase. Additionally, this single phase InSe is stable in the atmosphere, exhibiting superior electronic properties even after over 100 days exposure. Recently, this method has been successfully applied to a flexible substrate, such as aluminum foil, resulting in reliable InSe quality. Our results demonstrate an innovative and forward-looking approach to developing 2D InSe material.
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- 2022
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14. Chronic Kidney Disease—How Does It Go, and What Can We Do and Expect?
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Li-Yun Chang and Jer-Ming Chang
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n/a ,Biology (General) ,QH301-705.5 - Abstract
Chronic kidney disease (CKD), as a worldwide threat to public health, is a key determinant of poor health outcomes, but the severity of the problem is probably not fully appreciated [...]
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- 2023
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15. Serotonin Signals Modulate Mushroom Body Output Neurons for Sustaining Water-Reward Long-Term Memory in Drosophila
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Wang-Pao Lee, Meng-Hsuan Chiang, Li-Yun Chang, Wei-Huan Shyu, Tai-Hsiang Chiu, Tsai-Feng Fu, Tony Wu, and Chia-Lin Wu
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mushroom body ,serotonin ,5HT receptor ,long-term memory ,neuronal circuits of the brain ,Drosophila melanogaster ,Biology (General) ,QH301-705.5 - Abstract
Memory consolidation is a time-dependent process through which an unstable learned experience is transformed into a stable long-term memory; however, the circuit and molecular mechanisms underlying this process are poorly understood. The Drosophila mushroom body (MB) is a huge brain neuropil that plays a crucial role in olfactory memory. The MB neurons can be generally classified into three subsets: γ, αβ, and α′β′. Here, we report that water-reward long-term memory (wLTM) consolidation requires activity from α′β′-related mushroom body output neurons (MBONs) in a specific time window. wLTM consolidation requires neurotransmission in MBON-γ3β′1 during the 0–2 h period after training, and neurotransmission in MBON-α′2 is required during the 2–4 h period after training. Moreover, neurotransmission in MBON-α′1α′3 is required during the 0–4 h period after training. Intriguingly, blocking neurotransmission during consolidation or inhibiting serotonin biosynthesis in serotoninergic dorsal paired medial (DPM) neurons also disrupted the wLTM, suggesting that wLTM consolidation requires serotonin signals from DPM neurons. The GFP Reconstitution Across Synaptic Partners (GRASP) data showed the connectivity between DPM neurons and MBON-γ3β′1, MBON-α′2, and MBON-α′1α′3, and RNAi-mediated silencing of serotonin receptors in MBON-γ3β′1, MBON-α′2, or MBON-α′1α′3 disrupted wLTM. Taken together, our results suggest that serotonin released from DPM neurons modulates neuronal activity in MBON-γ3β′1, MBON-α′2, and MBON-α′1α′3 at specific time windows, which is critical for the consolidation of wLTM in Drosophila.
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- 2021
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16. HMGB1 Promotes In Vitro and In Vivo Skeletal Muscle Atrophy through an IL-18-Dependent Mechanism
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Trung-Loc Ho, Chih-Hsin Tang, Sunny Li-Yun Chang, Chun-Hao Tsai, Hsien-Te Chen, and Chen-Ming Su
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HMGB1 ,IL-18 ,inflammation ,myogenesis ,skeletal muscle atrophy ,Cytology ,QH573-671 - Abstract
Skeletal muscle atrophy occurs due to muscle wasting or reductions in protein associated with aging, injury, and inflammatory processes. High-mobility group box-1 (HMGB1) protein is passively released from necrotic cells and actively secreted by inflammatory cells, and is implicated in the pathogenesis of various inflammatory and immune diseases. HMGB1 is upregulated in muscle inflammation, and circulating levels of the proinflammatory cytokine interleukin-18 (IL-18) are upregulated in patients with sarcopenia, a muscle-wasting disease. We examined whether an association exists between HMGB1 and IL-18 signaling in skeletal muscle atrophy. HMGB1-induced increases of IL-18 levels enhanced the expression of muscle atrophy markers and inhibited myogenic marker expression in C2C12 and G7 myoblast cell lines. HMGB1-induced increases of IL-18 production in C2C12 cells involved the RAGE/p85/Akt/mTOR/c-Jun signaling pathway. HMGB1 short hairpin RNA (shRNA) treatment rescued the expression of muscle-specific differentiation markers in murine C2C12 myotubes and in mice with glycerol-induced muscle atrophy. HMGB1 and IL-18 signaling was suppressed in the mice after HMGB1 shRNA treatment. These findings suggest that the HMGB1/IL-18 axis is worth targeting for the treatment of skeletal muscle atrophy.
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- 2022
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17. Visfatin-Induced Inhibition of miR-1264 Facilitates PDGF-C Synthesis in Chondrosarcoma Cells and Enhances Endothelial Progenitor Cell Angiogenesis
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Chang-Yu Song, Sunny Li-Yun Chang, Chih-Yang Lin, Chun-Hao Tsai, Shang-Yu Yang, Yi-Chin Fong, Yu-Wen Huang, Shih-Wei Wang, Wei-Cheng Chen, and Chih-Hsin Tang
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chondrosarcoma ,angiogenesis ,endothelial progenitor cell ,visfatin ,tumor angiogenesis ,platelet-derived growth factor ,Cytology ,QH573-671 - Abstract
New treatments for chondrosarcoma are extremely important. Chondrosarcoma is a primary malignant bone tumor with a very unfavorable prognosis. High-grade chondrosarcoma has a high potential to metastasize to any organ in the body. Platelet-derived growth factor (PDGF) is a potent angiogenic factor that promotes tumor angiogenesis and metastasis. The adipocytokine visfatin promotes metastatic potential of chondrosarcoma; however, the role of visfatin in angiogenesis in human chondrosarcoma is unclear. We report that the levels of PDGF-C expression were positively correlated with tumor stages, significantly higher than the levels of expression in normal cartilage. Visfatin increased PDGF-C expression and endothelial progenitor cell (EPC) angiogenesis through the PI3K/Akt/mTOR signaling pathway, and dose-dependently down-regulated the synthesis of miR-1264, which targets the 3′-UTR of PDGF-C. Additionally, we discovered inhibition of visfatin or PDGF-C in chondrosarcoma tumors significantly reduced tumor angiogenesis and size. Our results indicate that visfatin inhibits miR-1264 production through the PI3K/Akt/mTOR signaling cascade, and thereby promotes PDGF-C expression and chondrosarcoma angiogenesis. Visfatin may be worth targeting in the treatment of chondrosarcoma angiogenesis.
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- 2022
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18. Apelin Promotes Prostate Cancer Metastasis by Downregulating TIMP2 via Increases in miR-106a-5p Expression
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Tien-Huang Lin, Sunny Li-Yun Chang, Pham Minh Khanh, Nguyen Thi Nha Trang, Shan-Chi Liu, Hsiao-Chi Tsai, An-Chen Chang, Jo-Yu Lin, Po-Chun Chen, Ju-Fang Liu, Jeng-Hung Guo, Chun-Lin Liu, Hsi-Chin Wu, and Chih-Hsin Tang
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prostate cancer ,apelin ,TIMP2 ,miR-106-5p ,metastasis ,Cytology ,QH573-671 - Abstract
Prostate cancer commonly affects the urinary tract of men and metastatic prostate cancer has a very low survival rate. Apelin belongs to the family of adipokines and is associated with cancer development and metastasis. However, the effects of apelin in prostate cancer metastasis is undetermined. Analysis of the database revealed a positive correlation between apelin level with the progression and metastasis of prostate cancer patients. Apelin treatment facilitates cell migration and invasion through inhibiting tissue inhibitor of metalloproteinase 2 (TIMP2) expression. The increasing miR-106a-5p synthesis via c-Src/PI3K/Akt signaling pathway is controlled in apelin-regulated TIMP2 production and cell motility. Importantly, apelin blockade inhibits prostate cancer metastasis in the orthotopic mouse model. Thus, apelin is a promising therapeutic target for curing metastatic prostate cancer.
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- 2022
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19. Coordinates, retracts and automorphisms
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Li, Yun-Chang
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Mathematics - Rings and Algebras - Abstract
Let $K$ be a field of characteristic zero, $K[x,y]$ be the polynomial ring in two variables. Let $\phi=(f, g)$ be an endomorphism of $K[x,y]$. It is proved that if $\phi$ maps each coordinate to a generator of some proper retract, then it is an automorphism. As a corollary, the retract preserving problem is solved for both polynomial ring over $K$ and free algebra over an arbitrary field when $n=2$., Comment: 7 pages
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- 2012
20. Endomorphisms preserving coordinates of polynomial algebras
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Li, Yun-Chang and Yu, Jie-Tai
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Mathematics - Commutative Algebra ,Mathematics - Algebraic Geometry ,Mathematics - Rings and Algebras ,13F20, 13W20, 14R20 - Abstract
It is proved that the Jacobian of a k-endomorphism of k[x_1,...,x_n] over a field k of characteristic zero taking every tame coordinate to a coordinate, must be a nonzero constant in k. It is also proved that the Jacobian of an R-endomorphism of A:=R[x_1,...,x_n] (where R is a polynomial ring in finite number of variables over an infinite field k), taking every R-linear coordinate of A to an R-coordinate of A, is a nonzero constant in k., Comment: 6 pages
- Published
- 2011
21. Applications of degree estimate for subalgebras
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Li, Yun-Chang and Yu, Jie-Tai
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Mathematics - Rings and Algebras ,Mathematics - Commutative Algebra ,Mathematics - Algebraic Geometry ,Primary 13S10, 16S10. Secondary 13F20, 13W20, 14R10, 16W20, 16Z05 - Abstract
Let $K$ be a field of positive characteristic and $K
$ be the free algebra of rank two over $K$. Based on the degree estimate done by Y.-C. Li and J.-T. Yu, we extend the results of S.J. Gong and J.T. Yu's results: (1) An element $p(x,y)\in K $ is a test element if and only if $p(x,y)$ does not belong to any proper retract of $K $; (2) Every endomorphism preserving the automorphic orbit of a nonconstant element of $K $ is an automorphism; (3) If there exists some injective endomorphism $\phi$ of $K $ such that $\phi(p(x,y))=x$ where $p(x,y)\in K $, then $p(x,y)$ is a coordinate. And we reprove that all the automorphisms of $K $ are tame. Moreover, we also give counterexamples for two conjectures established by Leonid Makar-Limanov, V. Drensky and J.-T. Yu in the positive characteristic case., Comment: 12 pages - Published
- 2010
22. Dupilumab bei einem 5‐jährigen Kind mit Prurigo nodularis
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Lin, Chia‐Jen, primary, Li, Yun‐Chang, additional, Chang, Hui‐Chin, additional, and Hsiao, Yu‐Ping, additional
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- 2023
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23. Oral Administration of Clostridium butyricum GKB7 Ameliorates Signs of Osteoarthritis in Rats
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Sunny Li-Yun Chang, Yen-You Lin, Shan-Chi Liu, You-Shan Tsai, Shih-Wei Lin, Yen-Lien Chen, Chin-Chu Chen, Chih-Yuan Ko, Hsien-Te Chen, Wei-Cheng Chen, and Chih-Hsin Tang
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Clostridium butyricum GKB7 ,osteoarthritis ,anterior cruciate ligament transection ,in vivo ,interleukin 1 beta ,tumor necrosis factor alpha ,Cytology ,QH573-671 - Abstract
Osteoarthritis (OA) is a degenerative and painful inflammatory joint disease affecting the cartilage, bone, and synovial membranes, without any effective treatment that targets the underlying mechanisms of OA. Our study evaluated the therapeutic effects of a live probiotic strain, Clostridium butyricum GKB7, administered for 6 weeks to rats with knee OA (KOA) induced by anterior cruciate ligament transection (ACLT) of the right knee. All rats underwent weekly weight-bearing behavioral testing and body weight measurements. At 6 weeks, all rats were sacrificed, and the right hind knees were collected for micro-computed tomography imaging and histopathological and immunohistochemical analyses. Compared with rats in the ACLT-only group, ACLT rats administered the probiotic exhibited dramatic improvements in pain-related behavior from postoperative week 2, had significantly less osseous and cartilaginous damage at week 6, and significantly lower levels of the inflammatory markers interleukin 1 beta (IL-1β) and tumor necrosis factor alpha (TNF-α) in cartilage and synovium sections. C. butyricum GKB7 appeared to slow or even reverse OA progression and is worth investigating as a novel therapeutic for OA.
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- 2022
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24. Mushroom body subsets encode CREB2-dependent water-reward long-term memory in Drosophila.
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Wang-Pao Lee, Meng-Hsuan Chiang, Li-Yun Chang, Jhen-Yi Lee, Ya-Lun Tsai, Tai-Hsiang Chiu, Hsueh-Cheng Chiang, Tsai-Feng Fu, Tony Wu, and Chia-Lin Wu
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Genetics ,QH426-470 - Abstract
Long-term memory (LTM) formation depends on the conversed cAMP response element-binding protein (CREB)-dependent gene transcription followed by de novo protein synthesis. Thirsty fruit flies can be trained to associate an odor with water reward to form water-reward LTM (wLTM), which can last for over 24 hours without a significant decline. The role of de novo protein synthesis and CREB-regulated gene expression changes in neural circuits that contribute to wLTM remains unclear. Here, we show that acute inhibition of protein synthesis in the mushroom body (MB) αβ or γ neurons during memory formation using a cold-sensitive ribosome-inactivating toxin disrupts wLTM. Furthermore, adult stage-specific expression of dCREB2b in αβ or γ neurons also disrupts wLTM. The MB αβ and γ neurons can be further classified into five different neuronal subsets including αβ core, αβ surface, αβ posterior, γ main, and γ dorsal. We observed that the neurotransmission from αβ surface and γ dorsal neuron subsets is required for wLTM retrieval, whereas the αβ core, αβ posterior, and γ main are dispensable. Adult stage-specific expression of dCREB2b in αβ surface and γ dorsal neurons inhibits wLTM formation. In vivo calcium imaging revealed that αβ surface and γ dorsal neurons form wLTM traces with different dynamic properties, and these memory traces are abolished by dCREB2b expression. Our results suggest that a small population of neurons within the MB circuits support long-term storage of water-reward memory in Drosophila.
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- 2020
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25. Light trail design for energy-efficient traffic grooming in light-trail optical WDM networks.
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Hwa-Chun Lin, Li-Yun Chang, and Yuan-Xi Zhuang
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- 2016
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26. Clustering and Classification Based on Distributed Automatic Feature Engineering for Customer Segmentation
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Zne-Jung Lee, Chou-Yuan Lee, Li-Yun Chang, and Natsuki Sano
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clustering ,classification ,automatic feature engineering ,machine learning ,improved fuzzy decision tree ,Apache Spark ,Mathematics ,QA1-939 - Abstract
To beat competition and obtain valuable information, decision-makers must conduct in-depth machine learning or data mining for data analytics. Traditionally, clustering and classification are two common methods used in machine mining. For clustering, data are divided into various groups according to the similarity or common features. On the other hand, classification refers to building a model by given training data, where the target class or label is predicted for the test data. In recent years, many researchers focus on the hybrid of clustering and classification. These techniques have admirable achievements, but there is still room to ameliorate performances, such as distributed process. Therefore, we propose clustering and classification based on distributed automatic feature engineering (AFE) for customer segmentation in this paper. In the proposed algorithm, AFE uses artificial bee colony (ABC) to select valuable features of input data, and then RFM provides the basic data analytics. In AFE, it first initializes the number of cluster k. Moreover, the clustering methods of k-means, Wald method, and fuzzy c-means (FCM) are processed to cluster the examples in variant groups. Finally, the classification method of an improved fuzzy decision tree classifies the target data and generates decision rules for explaining the detail situations. AFE also determines the value of the split number in the improved fuzzy decision tree to increase classification accuracy. The proposed clustering and classification based on automatic feature engineering is distributed, performed in Apache Spark platform. The topic of this paper is about solving the problem of clustering and classification for machine learning. From the results, the corresponding classification accuracy outperforms other approaches. Moreover, we also provide useful strategies and decision rules from data analytics for decision-makers.
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- 2021
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27. <scp>CCN2</scp> Facilitates <scp>IL</scp> ‐17 Production and Osteoclastogenesis in Human Osteoarthritis Synovial Fibroblasts by Inhibiting <scp>miR</scp> ‐655 Expression
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Shan‐Chi Liu, Hung‐Lun Hsieh, Chun‐Hao Tsai, Yi‐Chin Fong, Chih‐Yuan Ko, Hsi‐Chin Wu, Sunny Li‐Yun Chang, Chin‐Jung Hsu, and Chih‐Hsin Tang
- Subjects
MicroRNAs ,Osteogenesis ,Endocrinology, Diabetes and Metabolism ,Interleukin-17 ,Osteoarthritis ,Synovial Membrane ,Connective Tissue Growth Factor ,Animals ,Humans ,Gene Expression ,Orthopedics and Sports Medicine ,Fibroblasts ,Rats - Abstract
Osteoarthritis (OA) is associated with extensive upregulation of osteoclastogenesis and subsequent bone breakdown. The CCN family protein connective tissue growth factor (CCN2, also called CCN2) enhances inflammatory cytokine production in OA disease. The cytokine interleukin (IL)-17 is known to induce osteoclastogenesis and bone erosion in arthritic disease. Our retrieval of data from the Gene Expression Omnibus (GEO) data set and clinical tissues exhibited higher CCN2 and IL-17 expression in OA synovial sample than in normal healthy samples. We observed the same phenomenon in synovial tissue from rats with anterior cruciate ligament transaction (ACLT)-elicited OA compared with synovial tissue from control healthy rats. We also found that CCN2 facilitated increases in IL-17 synthesis in human OA synovial fibroblasts (OASFs) and promoted osteoclast formation. CCN2 affected IL-17 production by reducing miR-655 expression through the ILK and Syk signaling cascades. Our findings improve our understanding about the effect of CCN2 in OA pathogenesis and, in particular, IL-17 production and osteoclastogenesis, which may help with the design of more effective OA treatments. © 2022 American Society for Bone and Mineral Research (ASBMR).
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- 2022
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28. Stevens–Johnson syndrome-like cutaneous toxicity with enfortumab vedotin in treating metastatic urothelial carcinoma: A case report.
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Li, Yun-Chang, Chen, Sung-Lang, Ke, Tung-Ying, and Chiu, Tsu-Man
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- 2024
- Full Text
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29. Genetic Associations of Visfatin Polymorphisms with EGFR Status and Clinicopathologic Characteristics in Lung Adenocarcinoma
- Author
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Sunny Li-Yun Chang, Po-Jen Yang, Yen-You Lin, Ya-Jing Jiang, Po-I Liu, Chang-Lun Huang, Shun-Fa Yang, and Chih-Hsin Tang
- Subjects
Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,visfatin ,nicotinamide phosphoribosyltransferase ,pre-B-cell colony-enhancing factor ,single nucleotide polymorphism ,non-small cell lung cancer - Abstract
Lung adenocarcinoma (LUAD) is the most common histologic type of lung cancer. Mutations of the epidermal growth factor receptor (EGFR) gene are among the most common genetic alterations in LUAD and are the targets of EGFR tyrosine kinase inhibitors. The enzyme visfatin is involved in the generation of the oxidized form of nicotinamide adenine dinucleotide (NAD+) and regulation of intracellular adenosine triphosphate (ATP), critical processes in cancer cell survival and growth. This study explored the relationship between visfatin single nucleotide polymorphisms (SNPs) with EGFR status and the clinicopathologic development of LUAD in a cohort of 277 Taiwanese men and women with LUAD. Allelic discrimination of four visfatin SNPs rs11977021, rs61330082, rs2110385 and rs4730153 was determined using a TaqMan Allelic Discrimination assay. We observed higher prevalence rates of advanced (T3/T4) tumors and distant metastases in EGFR wild-type patients carrying the rs11977021 CT + TT and rs61330082 GA + AA genotypes, respectively, compared with patients carrying the CC and GG genotypes. EGFR wild-type patients carrying the rs11977021 CT + TT genotypes were also more likely to develop severe (stage III/IV) malignancy compared with patients carrying the CC genotype. An analysis that included all patients found that the association persisted between the rs11977021 CT + TT and rs61330082 GA + AA genotypes and the development of T3/T4 tumors compared with patients carrying the rs11977021 CC and rs61330082 GG genotypes. In conclusion, these data indicate that visfatin SNPs may help to predict tumor staging in LUAD, especially in patients with EGFR wild-type status.
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- 2022
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30. Genetic Associations of
- Author
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Sunny Li-Yun, Chang, Po-Jen, Yang, Yen-You, Lin, Ya-Jing, Jiang, Po-I, Liu, Chang-Lun, Huang, Shun-Fa, Yang, and Chih-Hsin, Tang
- Subjects
Male ,ErbB Receptors ,Lung Neoplasms ,Humans ,Female ,Adenocarcinoma of Lung ,Nicotinamide Phosphoribosyltransferase ,Protein Kinase Inhibitors - Abstract
Lung adenocarcinoma (LUAD) is the most common histologic type of lung cancer. Mutations of the
- Published
- 2022
31. A Supervised Network Analysis on Gene Expression Profiles of Breast Tumors Predicts a 41-Gene Prognostic Signature of the Transcription Factor MYB across Molecular Subtypes.
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Li-Yu Daisy Liu, Li-Yun Chang, Wen-Hung Kuo, Hsiao-Lin Hwa, King-Jen Chang, and Fon-Jou Hsieh
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- 2014
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32. Learning to read Chinese: the roles of phonological awareness, paired-associate learning, and phonetic radical awareness
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Chien-Chih Tseng, Jon-Fan Hu, Li-Yun Chang, and Hsueh-Chih Chen
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Speech and Hearing ,Linguistics and Language ,Neuropsychology and Physiological Psychology ,Education - Abstract
This study aimed to determine how Chinese children adapt to Chinese orthography–phonology correspondence by acquiring phonetic radical awareness (PRA). This study used two important Chinese encoding approaches (rote and orthographic approaches) as the developmental trajectory, in which the present study hypothesized that phonological awareness (PA) exerts not only a direct influence on PRA but also an indirect influence through paired– associate learning (PAL). We also explored whether the association between PA and PAL is affected by the complexity of visual stimuli embedded in PAL. This study recruited 70 s-grade students to participate in various tests, which assessed (a) PA (measured by onset and rhyme awareness), (b) PRA (measured by regularity and consistency of phonetic radicals), (c) PAL (measured by learning performance on strokes; pattern-object and strokes pattern-syllable mapping), and (d) Chinese character recognition ability. Path analyses indicated that (1) character size had a significant positive correlation with PRA but not with PAL, (2) PAL fully mediated the association between PA and PRA, and (3) compared with PAL with a low stroke count, PA had a stronger relationship with PAL with a high stroke count. The results of this study were consistent with previous studies and suggest that PRA is the most important literacy skill for children in the middle of their learning-to-read stage. The results also augment existing literature by revealing that PRA acquisition is increased by PAL supported by PA, rather than by PA alone. Moreover, when the visual complexity of PAL increases, the support of PA to PAL would increase to make up for the working memory shortage.
- Published
- 2022
33. Therapeutic Effects of Live Lactobacillus plantarum GKD7 in a Rat Model of Knee Osteoarthritis
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Yen-You Lin, Sunny Li-Yun Chang, Shan-Chi Liu, David Achudhan, You-Shan Tsai, Shih-Wei Lin, Yen-Lien Chen, Chin-Chu Chen, Jun-Way Chang, Yi-Chin Fong, Sung-Lin Hu, and Chih-Hsin Tang
- Subjects
Nutrition and Dietetics ,osteoarthritis ,inflammation ,Lactobacillus plantarum GKD7 ,IL-1β ,TNF-α ,anterior cruciate ligament transection ,Food Science - Abstract
Osteoarthritis (OA) is a painful, progressive chronic inflammatory disease marked by cartilage destruction. Certain synovial inflammatory cytokines, such as IL-1β and TNF-α, promote OA inflammation and pain. Lactobacillus spp. is a well-known probiotic with anti-inflammatory, analgesic, antioxidant, and antiosteoporotic properties. This study evaluated the therapeutic effects of a live L. plantarum strain (GKD7) in the anterior cruciate ligament transection (ACLT)-induced OA rat model. The results show that oral administration of live L. plantarum GKD7 improved weight-bearing asymmetry after ACLT surgery. Moreover, micro-computed tomography images and histopathological analysis show that oral live L. plantarum GKD7 improved subchondral bone architecture, protected articular cartilage against ACLT-induced damage, and reduced synovial inflammation. L. plantarum GKD7 also reduced IL-1β and TNF-α production in OA cartilage and synovium. Thus, orally administered live L. plantarum GKD7 appears to effectively slow the progression of OA.
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- 2022
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34. Prognostic features of signal transducer and activator of transcription 3 in an ER(+) breast cancer model system
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Li-Yu D. Liu, Li-Yun Chang, Wen-Hung Kuo, Hsiao-Lin Hwa, Yi-Shing Lin, Meei-Huey Jeng, Don A. Roth, King-Jen Chang, and Fon-Jou Hsieh
- Subjects
Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2014
35. Oral Administration of
- Author
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Sunny Li-Yun, Chang, Yen-You, Lin, Shan-Chi, Liu, You-Shan, Tsai, Shih-Wei, Lin, Yen-Lien, Chen, Chin-Chu, Chen, Chih-Yuan, Ko, Hsien-Te, Chen, Wei-Cheng, Chen, and Chih-Hsin, Tang
- Subjects
Cartilage, Articular ,Clostridium butyricum ,Administration, Oral ,Animals ,X-Ray Microtomography ,Osteoarthritis, Knee ,Rats - Abstract
Osteoarthritis (OA) is a degenerative and painful inflammatory joint disease affecting the cartilage, bone, and synovial membranes, without any effective treatment that targets the underlying mechanisms of OA. Our study evaluated the therapeutic effects of a live probiotic strain
- Published
- 2022
36. Author response for '<scp>CCN2</scp> Facilitates <scp>IL</scp> ‐17 Production and Osteoclastogenesis in Human Osteoarthritis Synovial Fibroblasts by Inhibiting <scp>miR</scp> ‐655 Expression'
- Author
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null Shan‐Chi Liu, null Hung‐Lun Hsieh, null Chun‐Hao Tsai, null Yi‐Chin Fong, null Chih‐Yuan Ko, null Hsi‐Chin Wu, null Sunny Li‐Yun Chang, null Chin‐Jung Hsu, and null Chih‐Hsin Tang
- Published
- 2022
- Full Text
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37. Degree estimate for subalgebras
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Li, Yun-Chang and Yu, Jie-Tai
- Published
- 2012
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38. Antcin K inhibits VCAM-1-dependent monocyte adhesion in human rheumatoid arthritis synovial fibroblasts
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Achudhan, David, primary, Li-Yun Chang, Sunny, additional, Liu, Shan-Chi, additional, Lin, Yen-You, additional, Huang, Wei-Chien, additional, Wu, Yang-Chang, additional, Huang, Chien-Chung, additional, Tsai, Chun-Hao, additional, Ko, Chih-Yuan, additional, Kuo, Yueh-Hsiung, additional, and Tang, Chih-Hsin, additional
- Published
- 2022
- Full Text
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39. Melatonin regulates chicken granulosa cell proliferation and apoptosis by activating the mTOR signaling pathway via its receptors
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Chen-Xuan Huang, De-He Wang, Hui Chen, Rongyan Zhou, Ren-Lu Huang, Li-yun Chang, Hao Erying, and Qiaoxian Yue
- Subjects
Transcriptional Activation ,Physiology and Reproduction ,chicken granulosa cell ,proliferation ,melatonin ,P70-S6 Kinase 1 ,Melatonin receptor ,Antioxidants ,Melatonin ,03 medical and health sciences ,Downregulation and upregulation ,medicine ,Animals ,Receptor ,Granulosa cell proliferation ,Cells, Cultured ,PI3K/AKT/mTOR pathway ,lcsh:SF1-1100 ,Cell Proliferation ,030304 developmental biology ,0303 health sciences ,Granulosa Cells ,Chemistry ,TOR Serine-Threonine Kinases ,apoptosis ,0402 animal and dairy science ,04 agricultural and veterinary sciences ,General Medicine ,040201 dairy & animal science ,Molecular biology ,mTOR signaling pathway ,Apoptosis ,Female ,Animal Science and Zoology ,lcsh:Animal culture ,Chickens ,Signal Transduction ,medicine.drug - Abstract
Melatonin is a key regulator of follicle granular cell maturation and ovulation. The mammalian target of rapamycin (mTOR) pathway plays an important role in cell growth regulation. Therefore, our aim was to investigate whether the mTOR signaling pathway is involved in the regulation of melatonin-mediated proliferation and apoptotic mechanisms in granulosa cells. Chicken follicle granular cells were cultured with melatonin (0, 2, 20, or 200 μmol/L) for 48 h. The results showed that melatonin treatment enhanced proliferation and suppressed apoptosis in granular cells at 20 μmol/L and 200 μmol/L (P < 0.05) by upregulation of cyclin D1 (P < 0.01) and Bcl-2 (P < 0.01) and downregulation of P21, caspase-3, Beclin1, and LC3-II (P < 0.01). The effects resulted in the activation of the mTOR signaling pathway by increasing the expression of avTOR, PKC, 4E-BP1, S6K (P < 0.05), p-mTOR, and p-S6K. We added an mTOR activator and inhibitor to the cells and identified the optimal dose (10 μmol/L MHY1485 and 100 nmol/L rapamycin) for subsequent experiments. The combination of 20 μmol/L melatonin and 10 μmol/L MHY1485 significantly enhanced granulosa cell proliferation (P < 0.05), while 100 nmol/L rapamycin significantly inhibited proliferation and enhanced apoptosis (P < 0.05), but this action was reversed in the 20-μmol/L melatonin and 100-nmol/L rapamycin cotreatment groups (P < 0.05). This was confirmed by mRNA and protein expression that was associated with proliferation, apoptosis, and autophagy (P < 0.05). The combination of 20 μmol/L melatonin and 10 μmol/L MHY1485 also activated the mTOR pathway upstream genes PI3K, AKT1, and AKT2 and downstream genes PKC, 4E-BP1, and S6K (P < 0.05), as well as protein expression of p-mTOR and p-S6K. Rapamycin significantly inhibited the mTOR pathway–related genes mRNA levels (P < 0.05). In addition, activation of the mTOR pathway increased melatonin receptor mRNA levels (P < 0.05). In conclusion, these findings demonstrate that melatonin regulates chicken granulosa cell proliferation and apoptosis by activating the mTOR signaling pathway via its receptor.
- Published
- 2020
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- View/download PDF
40. Activation of L1 orthography in L2 word reading: Constraints from language and writing system
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Charles A. Perfetti, Li Yun Chang, Lin Chen, and Xiaoping Fang
- Subjects
Word reading ,Linguistics and Language ,media_common.quotation_subject ,First language ,05 social sciences ,Lexical access ,050105 experimental psychology ,Linguistics ,Education ,03 medical and health sciences ,0302 clinical medicine ,Writing system ,Second language ,Reading (process) ,0501 psychology and cognitive sciences ,Psychology ,030217 neurology & neurosurgery ,Orthography ,media_common - Abstract
When reading in a second language, a reader’s first language may be involved. For word reading, the question is how and at what level: lexical, pre-lexical, or both. In three experiments, we employed an implicit reading task (color judgment) and an explicit reading task (word naming) to test whether a Chinese meaning equivalent character and its sub-character orthography are activated when first language (L1) Chinese speakers read second language (L2) English words. Because Chinese and English have different spoken and written forms, any cross language effects cannot arise from shared written and spoken forms. Importantly, the experiments provide a comparison with single language experiments within Chinese, which show cross-writing system activation when words are presented in alphabetic Pinyin, leading to activation of the corresponding character and also its sub-character (radical) components. In the present experiments, Chinese–English bilinguals first silently read or made a meaning judgment on an English word. Immediately following, they judged the color of a character (Experiments 1A and 1B) or named it (Experiment 2). Four conditions varied the relation between the character that is the meaning equivalent of the English word and the following character presented for naming or color judgment. The experiments provide evidence that the Chinese meaning equivalent character is activated during the reading of the L2 English. In contrast to the within-Chinese results, the activation of Chinese characters did not extend to the sub-character level. This pattern held for both implicit reading (color judgment) and explicit reading (naming) tasks, indicating that for unrelated languages with writing systems, L1 activation during L2 reading occurs for the specific orthographic L1 form (a single character), mediated by meaning. We conclude that differences in writing systems do not block cross-language co-activation, but that differences in languages limit co-activation to the lexical level.
- Published
- 2020
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41. Parcellation of the striatal complex into dorsal and ventral districts
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Sylvia M. Evans, Fu Chin Liu, Hsin-An Ko, Sunny Li-Yun Chang, Janice Hsin-Jou Hao, Shih-Yun Chen, Ting-Hao Huang, Kuan-Ming Lu, and Yu-Ting Yan
- Subjects
Male ,0301 basic medicine ,Mice, Transgenic ,Nerve Tissue Proteins ,Striatum ,Nucleus accumbens ,Biology ,Basal Ganglia ,Nucleus Accumbens ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Interneurons ,Basal ganglia ,medicine ,Animals ,Enhancer ,Transcription factor ,Homeodomain Proteins ,Neurons ,Multidisciplinary ,Olfactory tubercle ,Ventral striatum ,Intracellular Signaling Peptides and Proteins ,Cell Differentiation ,Biological Sciences ,Phenotype ,Corpus Striatum ,Mice, Inbred C57BL ,030104 developmental biology ,medicine.anatomical_structure ,nervous system ,Ventral Striatum ,Female ,Neuroscience ,030217 neurology & neurosurgery ,Transcription Factors - Abstract
The striatal complex of basal ganglia comprises two functionally distinct districts. The dorsal district controls motor and cognitive functions. The ventral district regulates the limbic function of motivation, reward, and emotion. The dorsoventral parcellation of the striatum also is of clinical importance as differential striatal pathophysiologies occur in Huntington’s disease, Parkinson’s disease, and drug addiction disorders. Despite these striking neurobiologic contrasts, it is largely unknown how the dorsal and ventral divisions of the striatum are set up. Here, we demonstrate that interactions between the two key transcription factors Nolz-1 and Dlx1/2 control the migratory paths of striatal neurons to the dorsal or ventral striatum. Moreover, these same transcription factors control the cell identity of striatal projection neurons in both the dorsal and the ventral striata including the D1-direct and D2-indirect pathways. We show that Nolz-1, through the I12b enhancer, represses Dlx1/2, allowing normal migration of striatal neurons to dorsal and ventral locations. We demonstrate that deletion, up-regulation, and down-regulation of Nolz-1 and Dlx1/2 can produce a striatal phenotype characterized by a withered dorsal striatum and an enlarged ventral striatum and that we can rescue this phenotype by manipulating the interactions between Nolz-1 and Dlx1/2 transcription factors. Our study indicates that the two-tier system of striatal complex is built by coupling of cell-type identity and migration and suggests that the fundamental basis for divisions of the striatum known to be differentially vulnerable at maturity is already encoded by the time embryonic striatal neurons begin their migrations into developing striata.
- Published
- 2020
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42. Recognition of a Novel Gene Signature for Human Glioblastoma
- Author
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Chih-Hao Lu, Sung-Tai Wei, Jia-Jun Liu, Yu-Jen Chang, Yu-Feng Lin, Chin-Sheng Yu, and Sunny Li-Yun Chang
- Subjects
Extracellular Matrix Proteins ,Brain Neoplasms ,Gene Expression Profiling ,Organic Chemistry ,Membrane Proteins ,General Medicine ,Glioma ,glioblastoma ,astrocytoma ,oligodendrocytoma ,glioma ,biomarker signature ,gene signature ,survival ,machine learning ,LIM Domain Proteins ,Catalysis ,nervous system diseases ,Computer Science Applications ,Neoplasm Proteins ,Inorganic Chemistry ,DNA-Binding Proteins ,Gene Expression Regulation, Neoplastic ,Peroxidases ,Biomarkers, Tumor ,Humans ,Intercellular Signaling Peptides and Proteins ,Physical and Theoretical Chemistry ,Sulfotransferases ,Glioblastoma ,Molecular Biology ,Spectroscopy - Abstract
Glioblastoma (GBM) is one of the most common malignant and incurable brain tumors. The identification of a gene signature for GBM may be helpful for its diagnosis, treatment, prediction of prognosis and even the development of treatments. In this study, we used the GSE108474 database to perform GSEA and machine learning analysis, and identified a 33-gene signature of GBM by examining astrocytoma or non-GBM glioma differential gene expression. The 33 identified signature genes included the overexpressed genes COL6A2, ABCC3, COL8A1, FAM20A, ADM, CTHRC1, PDPN, IBSP, MIR210HG, GPX8, MYL9 and PDLIM4, as well as the underexpressed genes CHST9, CSDC2, ENHO, FERMT1, IGFN1, LINC00836, MGAT4C, SHANK2 and VIPR2. Protein functional analysis by CELLO2GO implied that these signature genes might be involved in regulating various aspects of biological function, including anatomical structure development, cell proliferation and adhesion, signaling transduction and many of the genes were annotated in response to stress. Of these 33 signature genes, 23 have previously been reported to be functionally correlated with GBM; the roles of the remaining 10 genes in glioma development remain unknown. Our results were the first to reveal that GBM exhibited the overexpressed GPX8 gene and underexpressed signature genes including CHST9, CSDC2, ENHO, FERMT1, IGFN1, LINC00836, MGAT4C and SHANK2, which might play crucial roles in the tumorigenesis of different gliomas.
- Published
- 2022
43. In Silico Prediction for Regulation of Transcription Factors onTheir Shared Target Genes Indicates Relevant Clinical Implications in a Breast Cancer Population
- Author
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Fon-Jou Hsieh, King-Jen Chang, Ming-Kwang Shyu, Hsiao-Lin Hwa, Wen-Hung Kuo, Li-Yun Chang, and Li-Yu D Liu
- Subjects
Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2012
44. The roles of configuration and orthography in Chinese recognition: a developmental approach.
- Author
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Yi-Ling Chung, Hsin-Hsuan Wu, Yu-Shu Chiang, Jon-Fan Hu, Chiu-Hua Huang, Hsueh-Chih Chen, Chien-Chih Tseng, and Li-Yun Chang
- Published
- 2013
45. Orthography and configuration on Chinese literacy acquisition: evidence from eye movement.
- Author
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Yi-Ling Chung, Yu-Shu Chiang, Hsin-Hsuan Wu, Jon-Fan Hu, Chiu-Hua Huang, Hsueh-Chih Chen, Chien-Chih Tseng, and Li-Yun Chang
- Published
- 2013
46. The Development of Orthographic Awareness for Radical Properties of Chinese Characters in Young Children.
- Author
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Yi-Ling Chung, Pei-Yu Luo, Hsueh-Chih Chen, Li-Yun Chang, and Jon-Fan Hu
- Published
- 2012
47. The Interactions Between GPR30 and the Major Biomarkers in Infiltrating Ductal Carcinoma of the Breast in an Asian Population
- Author
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Wen-Hung Kuo, Li-Yun Chang, Daisy Li-Yu Liu, Hsiao-Lin Hwa, Jen-Jen Lin, Po-Huang Lee, Chiung-Nien Chen, Huang-Chun Lien, Ray-Hwang Yuan, Chia-Tung Shun, King-Jen Chang, and Fon-Jou Hsieh
- Subjects
estrogen receptor α ,G-protein-coupled receptor 30 ,human epidermal growth factor receptor-2 ,mRNA ,progesterone receptor ,Gynecology and obstetrics ,RG1-991 - Abstract
Objective: G-protein-coupled receptor 30 (GPR30) has been reported to be a novel estrogen receptor a (ERa) in vitro. Therefore, the interactions among GPR30, ERa, progesterone receptor (PR) and human epidermal growth factor receptor-2 (HER-2/neu), and their prognostic utilities in the infiltrating ductal carcinoma (IDC) of the breast were evaluated. Materials and Methods: Messenger RNA (mRNA) levels of GPR30, ERa, PR and HER-2/neu in the tumor samples of 118 Taiwanese IDC patients and 27 non-tumor mammary tissues were measured via quantitative polymerase chain reaction analyses. The correlations of GPR30 mRNA levels with clinical parameters, i.e. tumor/non-tumor, ERa, PR, HER-2/neu, age, lymph node metastasis, lymph–vascular invasion, grade, stage and patient survival, were assessed by using appropriate statistical analyses. Results: GPR30 expression was observed to be lower in IDC (p < 0.001) than in non-tumor mammary tissues. Importantly, GPR30 mRNA level was positively correlated with that of ERa (p = 0.001) and PR (p = 0.001) but not correlated with that of HER-2/neu when they were analyzed as continuous variables. However, lower GPR30 was noticed in tumors with HER-2/neu protein overexpression. GPR30 expression was not correlated with age, lymph node metastasis, lymph–vascular invasion, grade and stage in IDC. GPR30 expression was not an independent prognostic factor for patient survival. Conclusion: GPR30 expression is downregulated in IDC. GPR30 is preferentially co-expressed with ER and/or PR but is lowly expressed in HER-2/neu(+) tumors. The correlation of GPR30 expression with clinical parameters, including patient survival, was not evident in this cohort.
- Published
- 2007
- Full Text
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48. The Major Prognostic Features of Nuclear Receptor NR5A2 in Infiltrating Ductal Breast Carcinomas
- Author
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Li-Yun Chang, Li-Yu D. Liu, Don A. Roth, Wen-Hung Kuo, Hsiao-Lin Hwa, King-Jen Chang, and Fon-Jou Hsieh
- Subjects
Genetics ,QH426-470 - Abstract
Background. Gene expression profiles of 181 breast cancer samples were analyzed to identify prognostic features of nuclear receptors NR5A1 and NR5A2 based upon their associated transcriptional networks. Methods. A supervised network analysis approach was used to build the NR5A-mediated transcriptional regulatory network. Other bioinformatic tools and statistical methods were utilized to confirm and extend results from the network analysis methodology. Results. NR5A2 expression is a negative factor in breast cancer prognosis in both ER(−) and ER(−)/ER(+) mixed cohorts. The clinical and cohort significance of NR5A2-mediated transcriptional activities indicates that it may have a significant role in attenuating grade development and cancer related signal transduction pathways. NR5A2 signature that conditions poor prognosis was identified based upon results from 15 distinct probes. Alternatively, the expression of NR5A1 predicts favorable prognosis when concurrent NR5A2 expression is low. A favorable signature of eight transcription factors mediated by NR5A1 was also identified. Conclusions. Correlation of poor prognosis and NR5A2 activity is identified by NR5A2-mediated 15-gene signature. NR5A2 may be a potential drug target for treating a subset of breast cancer tumors across breast cancer subtypes, especially ER(−) breast tumors. The favorable prognostic feature of NR5A1 is predicted by NR5A1-mediated 8-gene signature.
- Published
- 2015
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- View/download PDF
49. Cloning and Expression Level Analysis of Two BnaANT Candidate Genes in Brassica napus
- Author
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CHEN, Bo, WANG, Tai-xia, WANG, Han-zhong, LI, Yun-chang, YAN, Xiao-hong, WANG, Li-jun, and WEI, Wen-hui
- Published
- 2010
- Full Text
- View/download PDF
50. Clustering and Classification Based on Distributed Automatic Feature Engineering for Customer Segmentation
- Author
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Natsuki Sano, Zne-Jung Lee, Chou-Yuan Lee, and Li-Yun Chang
- Subjects
Feature engineering ,Physics and Astronomy (miscellaneous) ,Apache Spark ,Computer science ,General Mathematics ,Decision rule ,computer.software_genre ,Class (biology) ,Fuzzy logic ,ComputingMethodologies_PATTERNRECOGNITION ,machine learning ,classification ,improved fuzzy decision tree ,Chemistry (miscellaneous) ,Spark (mathematics) ,Computer Science (miscellaneous) ,Data analysis ,QA1-939 ,Data mining ,Cluster analysis ,computer ,automatic feature engineering ,Mathematics ,Test data ,clustering - Abstract
To beat competition and obtain valuable information, decision-makers must conduct in-depth machine learning or data mining for data analytics. Traditionally, clustering and classification are two common methods used in machine mining. For clustering, data are divided into various groups according to the similarity or common features. On the other hand, classification refers to building a model by given training data, where the target class or label is predicted for the test data. In recent years, many researchers focus on the hybrid of clustering and classification. These techniques have admirable achievements, but there is still room to ameliorate performances, such as distributed process. Therefore, we propose clustering and classification based on distributed automatic feature engineering (AFE) for customer segmentation in this paper. In the proposed algorithm, AFE uses artificial bee colony (ABC) to select valuable features of input data, and then RFM provides the basic data analytics. In AFE, it first initializes the number of cluster k. Moreover, the clustering methods of k-means, Wald method, and fuzzy c-means (FCM) are processed to cluster the examples in variant groups. Finally, the classification method of an improved fuzzy decision tree classifies the target data and generates decision rules for explaining the detail situations. AFE also determines the value of the split number in the improved fuzzy decision tree to increase classification accuracy. The proposed clustering and classification based on automatic feature engineering is distributed, performed in Apache Spark platform. The topic of this paper is about solving the problem of clustering and classification for machine learning. From the results, the corresponding classification accuracy outperforms other approaches. Moreover, we also provide useful strategies and decision rules from data analytics for decision-makers.
- Published
- 2021
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