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6 results on '"Lesniewski, Ryan A"'

1. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

Author

Schloss, Patrick D., Westcott, Sarah L., Ryabin, Thomas, Hall, Justine R., Hartmann, Martin, Hollister, Emily B., Lesniewski, Ryan A., Oakley, Brian B., Parks, Donovan H., Robinson, Courtney J., Sahl, Jason W., Stres, Blaz, Thallinger, Gerhard G., Van Horn, David J., and Weber, Carolyn F.

Subjects
Nucleotide sequence -- Analysis, Marine microbiology -- Research, Microbial genetics -- Research, Public software -- Usage, Ribosomal RNA -- Research, Open source software, Biological sciences
Abstract

A single software platform, mothur, is used to trim, screen, and align sequences, calculate distances, assign sequences to operational taxonomic units and also to describe the [alpha] and [beta] diversity of eight marine samples previously characterized by pyrosequencing of 16S rRNA gene fragments. The analysis of the huge sequence is completed in less than 2 hours with a laptop computer.

Published
2009

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