151 results on '"Lepš J"'
Search Results
2. Plant Species Diversity, Plant Biomass and Responses of the Soil Community on Abandoned Land across Europe: Idiosyncracy or Above-Belowground Time Lags
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Hedlund, K., Regina, I. Santa, Van der Putten, W. H., Lepš, J., Díaz, T., Korthals, G. W., Lavorel, S., Brown, V. K., Gormsen, D., Mortimer, S. R., Barrueco, C. Rodríguez, Roy, J., Smilauer, P., Smilauerová, M., and Van Dijk, C.
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- 2003
3. Introduction
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Rusch, G. M., Pausas, J. G., and Lepš, J.
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- 2003
4. Plant Species Diversity as a Driver of Early Succession in Abandoned Fields: A Multi-Site Approach
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Van der Putten, W. H., Mortimer, S. R., Hedlund, K., Van Dijk, C., Brown, V. K., Lepš, J., Rodriguez-Barrueco, C., Roy, J., Gormsen, D., Korthals, G. W., Lavorel, S., Regina, I. Santa, and Smilauer, P.
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- 2000
5. Comparative Ecology of Seedling Recruitment in an Oligotrophic Wet Meadow
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Kotorová, I. and Lepš, J.
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- 1999
6. Introduction
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Lepš, J., Goldberg, D. E., Herben, T., and Palmer, M.
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- 1999
7. The functional structure of plant communities drives soil functioning via changes in soil abiotic properties
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Czech Science Foundation, Agencia Estatal de Investigación (España), European Commission, Comunidad de Madrid, Universidad Rey Juan Carlos, Estonian Research Council, Valencia, Enrique [0000-0003-3359-0759], Galland, Thomas [0000-0003-0883-8871], Carmona, Carlos P. [0000-0001-6935-4913], Goberna, Marta [0000-0001-5303-3429], Götzenberger, Lars [0000-0003-3040-2900], Lepš, J. [0000-0002-4822-7429], Verdú, Miguel [0000-0002-9778-7692, de Bello, Francesco [0000-0001-9202-8198], Valencia, Enrique, Galland, Thomas, Carmona, Carlos P., Goberna, M., Götzenberger, Lars, Lepš, J., Verdú, Miguel, Macek, Petr, de Bello, Francesco, Czech Science Foundation, Agencia Estatal de Investigación (España), European Commission, Comunidad de Madrid, Universidad Rey Juan Carlos, Estonian Research Council, Valencia, Enrique [0000-0003-3359-0759], Galland, Thomas [0000-0003-0883-8871], Carmona, Carlos P. [0000-0001-6935-4913], Goberna, Marta [0000-0001-5303-3429], Götzenberger, Lars [0000-0003-3040-2900], Lepš, J. [0000-0002-4822-7429], Verdú, Miguel [0000-0002-9778-7692, de Bello, Francesco [0000-0001-9202-8198], Valencia, Enrique, Galland, Thomas, Carmona, Carlos P., Goberna, M., Götzenberger, Lars, Lepš, J., Verdú, Miguel, Macek, Petr, and de Bello, Francesco
- Abstract
While biodiversity is expected to enhance multiple ecosystem functions (EFs), the different roles of multiple biodiversity dimensions remain difficult to disentangle without carefully designed experiments. We sowed plant communities with independent levels of functional (FD) and phylogenetic diversities (PD), combined with different levels of fertilization, to investigate their direct and indirect roles on multiple EFs, including plant-related EFs (plant biomass productivity, litter decomposability), soil fertility (organic carbon and nutrient pool variables), soil microbial activity (respiration and nutrient cycling), and an overall multifunctionality. We expected an increase in most EFs in communities with higher values of FD and/or PD via complementarity effects, but also the dominant plant types (using community weighted mean, CWM, independent of FD and PD) via selection effects on several EFs. The results showed strong direct effects of different dimensions of plant functional structure parameters on plant-related EFs, through either CWM or FD, with weak effects of PD. Fertilization had significant effects on one soil microbial activity and indirect effects on the other variables via changes in soil abiotic properties. Dominant plant types and FD showed only indirect effects on soil microbial activity, through litter decomposition and soil abiotic properties, highlighting the importance of cascading effects. This study shows the relevance of complementary dimensions of biodiversity for assessing both direct and cascading effects on multiple EFs.
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- 2022
8. Establishment of Picea abies Seedlings in a Central European Mountain Grassland: An Experimental Study
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Prach, K., Lepš, J., and Michálek, J.
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- 1996
9. Differences in trait–environment relationships: Implications for community weighted means tests
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Czech Science Foundation, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Lepš, J., de Bello, Francesco, Czech Science Foundation, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Lepš, J., and de Bello, Francesco
- Abstract
One of J.P. Grime's greatest achievements was demonstrating the importance of the relationship between the environment and plant functional traits for understanding community assembly processes and the effects of biodiversity on ecosystem functioning. A popular approach assessing trait–environment relationships is the community weighted means (CWMs) method, which evaluates changes in communities' average trait values along gradients, with Grime being among its first practitioners. Today the CWM method is well-established but some scholars have criticized it for inflated Type I errors. That is, in some scenarios of compositional turnover along a gradient, CWM tests can provide significant results even for randomly generated traits. Null models have been proposed to correct for such effects by randomizing trait values across species (CWM-sp). We review different approaches relating traits to the environment within the framework of the accepted dichotomy between species-level (observations are species) versus community-level (observations are community parameters) analyses. Between these families of analyses and their combinations, a great variety of methods exist that test different trait–environment relationships, each with different null hypotheses and ecological questions. In classic CWM tests, the null hypothesis focuses on characteristics of trait distributions at the community level along gradients. The Type I error rate should not be a priori considered inflated when this test is used to identify changes in community trait structure affecting the functioning of communities. Trait changes observed with CWM tests may be accurate, but the interpretation that a specific trait drives turnover may be fallacious. Approaches like CWM-sp may be more appropriate for testing other ecological hypotheses, such as whether trait–environment relationships are widespread across species. In effect, this moves the ecological focus towards species-level analyses, that is on the ad
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- 2023
10. Functional trait trade-offs define plant population stability across different biomes
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Czech Science Foundation, Academy of Sciences of the Czech Republic, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Scottish Government's Rural and Environment Science and Analytical Services, Estonian Research Council, European Commission, New Zealand Government, Comunidad de Madrid, Natural Environment Research Council (UK), Department for Environment, Food & Rural Affairs (UK), Leverhulme Trust, National Science Foundation (US), Fundación Ramón Areces, Conti, Luisa, Valencia, Enrique, Galland, Thomas, Götzenberger, Lars, Lepš, J., E-Vojtkó, Anna, Carmona, Carlos P., Majekova, M., Danihelka, Jiří, Dengler, Jürgen, Eldridge, David J., Estiarte, Marc, García-González, Ricardo, Garnier, Eric, Gómez García, Daniel, Hadincová, Věra, Harrison, Susan P., Herben, Tomas, Ibáñez, Ricardo, Jentsch, Anke, Juergens, Norbert, Kertész, Miklós, Klumpp, Katja, Krahulec, František, Louault, Frédérique, Marrs, Rob H., Ónodi, Gábor, Pakeman, Robin J., Pärtel, Meelis, Peco, Begoña, Peñuelas, Josep, Rueda, Marta, Schmidt, Wolfgang, Schmiedel, Ute, Schuetz, Martin, Skalova, Hana, Šmilauer, Petr, Šmilauerová, Marie, Smit, Christian, Song, Ming‐Hua, Stock, Martin, Val, James, Vandvik, Vigdis, Ward, David, Wesche, Karsten, Wiser, Susan K., Woodcock, Ben A., Young, Truman P., Yu, Fei‐Hai, Zobel, Martin, de Bello, Francesco, Czech Science Foundation, Academy of Sciences of the Czech Republic, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Scottish Government's Rural and Environment Science and Analytical Services, Estonian Research Council, European Commission, New Zealand Government, Comunidad de Madrid, Natural Environment Research Council (UK), Department for Environment, Food & Rural Affairs (UK), Leverhulme Trust, National Science Foundation (US), Fundación Ramón Areces, Conti, Luisa, Valencia, Enrique, Galland, Thomas, Götzenberger, Lars, Lepš, J., E-Vojtkó, Anna, Carmona, Carlos P., Majekova, M., Danihelka, Jiří, Dengler, Jürgen, Eldridge, David J., Estiarte, Marc, García-González, Ricardo, Garnier, Eric, Gómez García, Daniel, Hadincová, Věra, Harrison, Susan P., Herben, Tomas, Ibáñez, Ricardo, Jentsch, Anke, Juergens, Norbert, Kertész, Miklós, Klumpp, Katja, Krahulec, František, Louault, Frédérique, Marrs, Rob H., Ónodi, Gábor, Pakeman, Robin J., Pärtel, Meelis, Peco, Begoña, Peñuelas, Josep, Rueda, Marta, Schmidt, Wolfgang, Schmiedel, Ute, Schuetz, Martin, Skalova, Hana, Šmilauer, Petr, Šmilauerová, Marie, Smit, Christian, Song, Ming‐Hua, Stock, Martin, Val, James, Vandvik, Vigdis, Ward, David, Wesche, Karsten, Wiser, Susan K., Woodcock, Ben A., Young, Truman P., Yu, Fei‐Hai, Zobel, Martin, and de Bello, Francesco
- Abstract
Ecological theory posits that temporal stability patterns in plant populations are associated with differences in species' ecological strategies. However, empirical evidence is lacking about which traits, or trade-offs, underlie species stability, especially across different biomes. We compiled a worldwide collection of long-term permanent vegetation records (greater than 7000 plots from 78 datasets) from a large range of habitats which we combined with existing trait databases. We tested whether the observed inter-annual variability in species abundance (coefficient of variation) was related to multiple individual traits. We found that populations with greater leaf dry matter content and seed mass were more stable over time. Despite the variability explained by these traits being low, their effect was consistent across different datasets. Other traits played a significant, albeit weaker, role in species stability, and the inclusion of multi-variate axes or phylogeny did not substantially modify nor improve predictions. These results provide empirical evidence and highlight the relevance of specific ecological trade-offs, i.e. in different resource-use and dispersal strategies, for plant populations stability across multiple biomes. Further research is, however, necessary to integrate and evaluate the role of other specific traits, often not available in databases, and intraspecific trait variability in modulating species stability.
- Published
- 2023
11. Differential response of communities of plants, snails, ants and spiders to long-term mowing in a small-scale experiment
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Pech, P., Dolanský, J., Hrdlička, R., and Lepš, J.
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- 2015
12. Synchrony matters more than species richness in plant community stability at a global scale
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National Science Foundation (US), New Zealand National Vegetation Survey Databank, University of Minnesota, Biotechnology and Biological Sciences Research Council (UK), Czech Science Foundation, Academy of Sciences of the Czech Republic, Comunidad de Madrid, Bello, Francesco de [0000-0001-9202-8198], Galland, Thomas [0000-0003-0883-8871], Lepš, J. [0000-0002-4822-7429], E‐Vojtkó, Anna [0000-0001-6370-680X], Carmona, Carlos P. [0000-0001-6935-4913], García-González, Ricardo [0000-0001-5625-8690], Götzenberger, L. [0000-0003-3040-2900], Valencia, Enrique, de Bello, Francesco, Galland, Thomas, Adler, Peter B., Lepš, J., E‐Vojtkó, Anna, Klink, Roel van, Carmona, Carlos P., Danihelka, Jiří, Dengler, Jürgen, Eldridge, David J., Estiarte, Marc, García-González, Ricardo, Garnier, Eric, Gómez García, Daniel, Harrison, Susan P., Herben, Tomas, Ibáñez, Ricardo, Jentsch, Anke, Juergens, Norbert, Kertész, Miklós, Klumpp, Katja, Louault, Frédérique, Marrs, Rob H., Ogaya, Romá, Ónodi, Gábor, Pakeman, Robin J., Pardo, Iker, Pärtel, Meelis, Peco, Begoña, Peñuelas, Josep, Pywell, Richard F., Rueda, Marta, Schmidt, Wolfgang, Schmiedel, Ute, Schuetz, Martin, Skalova, Hana, Šmilauer, Petr, Šmilauerová, Marie, Smit, Christian, Song, Ming‐Hua, Stock, Martin, Val, James, Vandvik, Vigdis, Ward, David, Wesche, Karsten, Wiser, Susan K., Woodcock, Ben A., Young, Truman P., Yu, Fei‐Hai, Zobel, Martin, Götzenberger, Lars, National Science Foundation (US), New Zealand National Vegetation Survey Databank, University of Minnesota, Biotechnology and Biological Sciences Research Council (UK), Czech Science Foundation, Academy of Sciences of the Czech Republic, Comunidad de Madrid, Bello, Francesco de [0000-0001-9202-8198], Galland, Thomas [0000-0003-0883-8871], Lepš, J. [0000-0002-4822-7429], E‐Vojtkó, Anna [0000-0001-6370-680X], Carmona, Carlos P. [0000-0001-6935-4913], García-González, Ricardo [0000-0001-5625-8690], Götzenberger, L. [0000-0003-3040-2900], Valencia, Enrique, de Bello, Francesco, Galland, Thomas, Adler, Peter B., Lepš, J., E‐Vojtkó, Anna, Klink, Roel van, Carmona, Carlos P., Danihelka, Jiří, Dengler, Jürgen, Eldridge, David J., Estiarte, Marc, García-González, Ricardo, Garnier, Eric, Gómez García, Daniel, Harrison, Susan P., Herben, Tomas, Ibáñez, Ricardo, Jentsch, Anke, Juergens, Norbert, Kertész, Miklós, Klumpp, Katja, Louault, Frédérique, Marrs, Rob H., Ogaya, Romá, Ónodi, Gábor, Pakeman, Robin J., Pardo, Iker, Pärtel, Meelis, Peco, Begoña, Peñuelas, Josep, Pywell, Richard F., Rueda, Marta, Schmidt, Wolfgang, Schmiedel, Ute, Schuetz, Martin, Skalova, Hana, Šmilauer, Petr, Šmilauerová, Marie, Smit, Christian, Song, Ming‐Hua, Stock, Martin, Val, James, Vandvik, Vigdis, Ward, David, Wesche, Karsten, Wiser, Susan K., Woodcock, Ben A., Young, Truman P., Yu, Fei‐Hai, Zobel, Martin, and Götzenberger, Lars
- Abstract
The stability of ecological communities is critical for the stable provisioning of ecosystem services, such as food and forage production, carbon sequestration, and soil fertility. Greater biodiversity is expected to enhance stability across years by decreasing synchrony among species, but the drivers of stability in nature remain poorly resolved. Our analysis of time series from 79 datasets across the world showed that stability was associated more strongly with the degree of synchrony among dominant species than with species richness. The relatively weak influence of species richness is consistent with theory predicting that the effect of richness on stability weakens when synchrony is higher than expected under random fluctuations, which was the case in most communities. Land management, nutrient addition, and climate change treatments had relatively weak and varying effects on stability, modifying how species richness, synchrony, and stability interact. Our results demonstrate the prevalence of biotic drivers on ecosystem stability, with the potential for environmental drivers to alter the intricate relationship among richness, synchrony, and stability.
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- 2020
13. Directional trends in species composition over time can lead to a widespread overemphasis of year-to-year asynchrony
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National Science Foundation (US), Ministerio de Economía y Competitividad (España), Comunidad de Madrid, European Commission, New Zealand National Vegetation Survey Databank, European Research Council, Estonian Research Council, Agence Nationale de la Recherche (France), Czech Science Foundation, German Federal Environmental Foundation, Federal Ministry of Education and Research (Germany), Scottish Government's Rural and Environment Science and Analytical Services, Bello, Francesco de [0000-0001-9202-8198], Lepš, J. [0000-0002-4822-7429], Galland, Thomas [0000-0003-0883-8871], E‐Vojtkó, Anna [0000-0001-6370-680X], Götzenberger, L. [0000-0003-3040-2900], Valencia, Enrique, de Bello, Francesco, Lepš, J., Galland, Thomas, E‐Vojtkó, Anna, Conti, Luisa, Danihelka, Jiří, Dengler, Jürgen, Eldridge, David J., Estiarte, Marc, García-González, Ricardo, Garnier, Eric, Gómez García, Daniel, Harrison, Susan P., Herben, Tomas, Ibáñez, Ricardo, Jentsch, Anke, Juergens, Norbert, Kertész, Miklós, Klumpp, Katja, Louault, Frédérique, Marrs, Rob H., Ónodi, Gábor, Pakeman, Robin J., Pärtel, Meelis, Peco, Begoña, Peñuelas, Josep, Rueda, Marta, Schmidt, Wolfgang, Schmiedel, Ute, Schuetz, Martin, Skalova, Hana, Šmilauer, Petr, Šmilauerová, Marie, Smit, Christian, Song, Ming‐Hua, Stock, Martin, Val, James, Vandvik, Vigdis, Wesche, Karsten, Woodcock, Ben A., Young, Truman P., Yu, Fei‐Hai, Zobel, Martin, Götzenberger, Lars, National Science Foundation (US), Ministerio de Economía y Competitividad (España), Comunidad de Madrid, European Commission, New Zealand National Vegetation Survey Databank, European Research Council, Estonian Research Council, Agence Nationale de la Recherche (France), Czech Science Foundation, German Federal Environmental Foundation, Federal Ministry of Education and Research (Germany), Scottish Government's Rural and Environment Science and Analytical Services, Bello, Francesco de [0000-0001-9202-8198], Lepš, J. [0000-0002-4822-7429], Galland, Thomas [0000-0003-0883-8871], E‐Vojtkó, Anna [0000-0001-6370-680X], Götzenberger, L. [0000-0003-3040-2900], Valencia, Enrique, de Bello, Francesco, Lepš, J., Galland, Thomas, E‐Vojtkó, Anna, Conti, Luisa, Danihelka, Jiří, Dengler, Jürgen, Eldridge, David J., Estiarte, Marc, García-González, Ricardo, Garnier, Eric, Gómez García, Daniel, Harrison, Susan P., Herben, Tomas, Ibáñez, Ricardo, Jentsch, Anke, Juergens, Norbert, Kertész, Miklós, Klumpp, Katja, Louault, Frédérique, Marrs, Rob H., Ónodi, Gábor, Pakeman, Robin J., Pärtel, Meelis, Peco, Begoña, Peñuelas, Josep, Rueda, Marta, Schmidt, Wolfgang, Schmiedel, Ute, Schuetz, Martin, Skalova, Hana, Šmilauer, Petr, Šmilauerová, Marie, Smit, Christian, Song, Ming‐Hua, Stock, Martin, Val, James, Vandvik, Vigdis, Wesche, Karsten, Woodcock, Ben A., Young, Truman P., Yu, Fei‐Hai, Zobel, Martin, and Götzenberger, Lars
- Abstract
Questions. Compensatory dynamics are described as one of the main mechanisms that increase community stability, e.g., where decreases of some species on a year‐to‐year basis are offset by an increase in others. Deviations from perfect synchrony between species (asynchrony) have therefore been advocated as an important mechanism underlying biodiversity effects on stability. However, it is unclear to what extent existing measures of synchrony actually capture the signal of year‐to‐year species fluctuations in the presence of long‐term directional trends in both species abundance and composition (species directional trends hereafter). Such directional trends may lead to a misinterpretation of indices commonly used to reflect year‐to‐year synchrony. Methods. An approach based on three‐term local quadrat variance (T3) which assesses population variability in a three‐year moving window, was used to overcome species directional trend effects. This “detrending” approach was applied to common indices of synchrony across a worldwide collection of 77 temporal plant community datasets comprising almost 7,800 individual plots sampled for at least six years. Plots included were either maintained under constant “control” conditions over time or were subjected to different management or disturbance treatments. Results. Accounting for directional trends increased the detection of year‐to‐year synchronous patterns in all synchrony indices considered. Specifically, synchrony values increased significantly in ~40% of the datasets with the T3 detrending approach while in ~10% synchrony decreased. For the 38 studies with both control and manipulated conditions, the increase in synchrony values was stronger for longer time series, particularly following experimental manipulation. Conclusions. Species’ long‐term directional trends can affect synchrony and stability measures potentially masking the ecological mechanism causing year‐to‐year fluctuations. As such, previous studies on communit
- Published
- 2020
14. Effects of functional and phylogenetic diversity on the temporal dynamics of soil N availability
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British Ecological Society, Comunidad de Madrid, Universidad Rey Juan Carlos, Czech Science Foundation, Estonian Research Council, Fundação para a Ciência e a Tecnologia (Portugal), Valencia, Enrique, de Bello, Francesco, Galland, Thomas, Götzenberger, Lars, Lepš, J., Durán, Jorge, Carmona, Carlos P., British Ecological Society, Comunidad de Madrid, Universidad Rey Juan Carlos, Czech Science Foundation, Estonian Research Council, Fundação para a Ciência e a Tecnologia (Portugal), Valencia, Enrique, de Bello, Francesco, Galland, Thomas, Götzenberger, Lars, Lepš, J., Durán, Jorge, and Carmona, Carlos P.
- Abstract
[Purpose]: Plant species diversity is expected to affect multiple ecosystem functions, such as soil nitrogen (N) availability. However, this effect may be related to the ecological differentiation between coexisting species, often expressed as either functional diversity (FD; diversity in traits) or phylogenetic diversity (PD; diversity in phylogenetic ancestry) within plant communities. Evidence for the independent and combined role of FD and PD on ecosystem functions is generally missing, as measures of FD and PD are usually confounded in empirical studies. [Methods]: To solve this challenge we used an ad-hoc designed biodiversity experiment, with sown meadow plant communities forming independent combinations of FD and PD (low/low, low/high, high/low, high/high values, plus monocultures) and used ion-exchange membranes to monitor changes in soil N (i.e. NH4+-N and NO3−-N) availability through time (four sampling times per year; i.e. seasonality). [Results]: Our results showed a positive diversity effect for soil NH4+-N, with mixture communities yielding higher levels of NH4+-N than the corresponding monocultures. Within mixtures, communities with combinations of both high FD and PD showed the highest NH4+-N availability. Most importantly, although seasonality strongly affected soil N availability, diversity effects were generally consistent through time in the case of NH4+-N. In addition to these diversity effects, communities with higher proportion of nitrogen-fixing species also showed higher soil N availability. [Conclusions]: Plant communities composed of species with larger ecological differences can sustain high levels of available NH4+-N throughout the year, suggesting a stimulation of decomposition processes via the coexistence of plants with multiple strategies.
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- 2022
15. LOTVS: A global collection of permanent vegetation plots
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Royal Society of New Zealand, Czech Science Foundation, Academy of Sciences of the Czech Republic, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), Institut National de la Recherche Agronomique (France), Federal Ministry of Education and Research (Germany), Oberfranken Stiftung, Agence Nationale de la Recherche (France), Scottish Government's Rural and Environment Science and Analytical Services, Estonian Research Council, European Commission, Fundación Ramón Areces, Generalitat de Catalunya, European Research Council, Dresden University of Technology, Ministry of Business, Innovation, and Employment (New Zealand), Natural Environment Research Council (UK), Biotechnology and Biological Sciences Research Council (UK), Comunidad de Madrid, Universidad Rey Juan Carlos, National Science Foundation (US), Gaia Sperandii, Marta, de Bello, Francesco, Valencia, Enrique, Götzenberger, Lars, Bazzichetto, Manuele, Galland, Thomas, E-Vojtkó, Anna, Conti, Luisa, Adler, Peter B., Buckley, Hannah, Danihelka, Jiří, Day, Nicola J., Dengler, Jürgen, Eldridge, David J., Estiarte, Marc, García-González, Ricardo, Garnier, Eric, Gómez García, Daniel, Hallett, Lauren, Harrison, Susan P., Herben, Tomas, Ibáñez, Ricardo, Jentsch, Anke, Juergens, Norbert, Kertész, Miklós, Kimuyu, Duncan M., Klumpp, Katja, Le Duc, Mike, Louault, Frédérique, Marrs, Rob H., Ónodi, Gábor, Pakeman, Robin J., Pärtel, Meelis, Peco, Begoña, Peñuelas, Josep, Rueda, Marta, Schmidt, Wolfgang, Schmiedel, Ute, Schuetz, Martin, Skalova, Hana, Šmilauer, Petr, Šmilauerová, Marie, Smit, Christian, Song, Ming‐Hua, Stock, Martin, Val, James, Vandvik, Vigdis, Wesche, Karsten, Wiser, Susan K., Woodcock, Ben A., Young, Truman P., Yu, Fei‐Hai, Wolf, Amelia A., Zobel, Martin, Lepš, J., Royal Society of New Zealand, Czech Science Foundation, Academy of Sciences of the Czech Republic, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), Institut National de la Recherche Agronomique (France), Federal Ministry of Education and Research (Germany), Oberfranken Stiftung, Agence Nationale de la Recherche (France), Scottish Government's Rural and Environment Science and Analytical Services, Estonian Research Council, European Commission, Fundación Ramón Areces, Generalitat de Catalunya, European Research Council, Dresden University of Technology, Ministry of Business, Innovation, and Employment (New Zealand), Natural Environment Research Council (UK), Biotechnology and Biological Sciences Research Council (UK), Comunidad de Madrid, Universidad Rey Juan Carlos, National Science Foundation (US), Gaia Sperandii, Marta, de Bello, Francesco, Valencia, Enrique, Götzenberger, Lars, Bazzichetto, Manuele, Galland, Thomas, E-Vojtkó, Anna, Conti, Luisa, Adler, Peter B., Buckley, Hannah, Danihelka, Jiří, Day, Nicola J., Dengler, Jürgen, Eldridge, David J., Estiarte, Marc, García-González, Ricardo, Garnier, Eric, Gómez García, Daniel, Hallett, Lauren, Harrison, Susan P., Herben, Tomas, Ibáñez, Ricardo, Jentsch, Anke, Juergens, Norbert, Kertész, Miklós, Kimuyu, Duncan M., Klumpp, Katja, Le Duc, Mike, Louault, Frédérique, Marrs, Rob H., Ónodi, Gábor, Pakeman, Robin J., Pärtel, Meelis, Peco, Begoña, Peñuelas, Josep, Rueda, Marta, Schmidt, Wolfgang, Schmiedel, Ute, Schuetz, Martin, Skalova, Hana, Šmilauer, Petr, Šmilauerová, Marie, Smit, Christian, Song, Ming‐Hua, Stock, Martin, Val, James, Vandvik, Vigdis, Wesche, Karsten, Wiser, Susan K., Woodcock, Ben A., Young, Truman P., Yu, Fei‐Hai, Wolf, Amelia A., Zobel, Martin, and Lepš, J.
- Abstract
Analysing temporal patterns in plant communities is extremely important to quantify the extent and the consequences of ecological changes, especially considering the current biodiversity crisis. Long-term data collected through the regular sampling of permanent plots represent the most accurate resource to study ecological succession, analyse the stability of a community over time and understand the mechanisms driving vegetation change. We hereby present the LOng-Term Vegetation Sampling (LOTVS) initiative, a global collection of vegetation time-series derived from the regular monitoring of plant species in permanent plots. With 79 data sets from five continents and 7,789 vegetation time-series monitored for at least 6 years and mostly on an annual basis, LOTVS possibly represents the largest collection of temporally fine-grained vegetation time-series derived from permanent plots and made accessible to the research community. As such, it has an outstanding potential to support innovative research in the fields of vegetation science, plant ecology and temporal ecology.
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- 2022
16. Do climate, resource availability, and grazing pressure filter floristic composition and functioning in Alpine pastures?
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Dainese, M., Scotton, M., Clementel, F., Pecile, A., and Lepš, J.
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- 2012
17. Positive relationship between plant palatability and litter decomposition in meadow plants
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Pálková, K. and Lepš, J.
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- 2008
18. Importance of species abundance for assessment of trait composition: an example based on pollinator communities
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de Bello, F., Lepš, J., Lavorel, S., and Moretti, M.
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- 2007
19. EVAPORATION OVER A HETEROGENEOUS LAND SURFACE : The EVA-GRIPS Project
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Mengelkamp, H.-T., Beyrich, F., Heinemann, G., Ament, F., Bange, J., Berger, F., Bösenberg, J., Foken, T., Hennemuth, B., Heret, C., Huneke, S., Johnsen, K.-P., Kerschgens, M., Kohsiek, W., Leps, J.-P., Liebethal, C., Lohse, H., Mauder, M., Meijninger, W., Raasch, S., Simmer, C., Spieß, T., Tittebrand, A., Uhlenbrock, J., and Zittel, P.
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- 2006
20. Colonization resistance and establishment success along gradients of functional and phylogenetic diversity in experimental plant communities
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Czech Science Foundation, European Commission, Estonian Research Council, Comunidad de Madrid, Galland, Thomas [0000-0003-0883-8871], Adeux, Guillaume [0000-0003-0903-391X], E‐Vojtkó, Anna [0000-0001-6370-680X], Orbán, Ildikó [0000-0003-1547-675X], Lussu, Michele [0000-0002-1313-4732], Puy, J. [0000-0002-6422-2791], Blažek, Petr [0000-0002-0901-4578], Lanta, Vojtech [0000-0003-4484-3838], Lepš, J.[0000-0002-4822-7429], Bello, Francesco de [0000-0001-9202-8198], Carmona, Carlos P. [0000-0001-6935-4913], Valencia, Enrique [0000-0003-3359-0759], Götzenberger, L. [0000-0003-3040-2900], Galland, Thomas, Adeux, Guillaume, Dvořáková, Hana, E‐Vojtkó, Anna, Orbán, Ildikó, Lussu, Michele, Puy, J., Blažek, Petr, Lanta, Vojtech, Lepš, J., de Bello, Francesco, Carmona, Carlos P., Valencia, Enrique, Götzenberger, Lars, Czech Science Foundation, European Commission, Estonian Research Council, Comunidad de Madrid, Galland, Thomas [0000-0003-0883-8871], Adeux, Guillaume [0000-0003-0903-391X], E‐Vojtkó, Anna [0000-0001-6370-680X], Orbán, Ildikó [0000-0003-1547-675X], Lussu, Michele [0000-0002-1313-4732], Puy, J. [0000-0002-6422-2791], Blažek, Petr [0000-0002-0901-4578], Lanta, Vojtech [0000-0003-4484-3838], Lepš, J.[0000-0002-4822-7429], Bello, Francesco de [0000-0001-9202-8198], Carmona, Carlos P. [0000-0001-6935-4913], Valencia, Enrique [0000-0003-3359-0759], Götzenberger, L. [0000-0003-3040-2900], Galland, Thomas, Adeux, Guillaume, Dvořáková, Hana, E‐Vojtkó, Anna, Orbán, Ildikó, Lussu, Michele, Puy, J., Blažek, Petr, Lanta, Vojtech, Lepš, J., de Bello, Francesco, Carmona, Carlos P., Valencia, Enrique, and Götzenberger, Lars
- Abstract
Functional and phylogenetic diversity (FD and PD respectively) of the resident community are expected to exert a key role in community resistance to colonization by surrounding species, and their establishment success. However, few studies have explored this topic experimentally or evaluated the interactive effects of these diversity measures. We implemented a diversity experiment to disentangle the role of FD and PD by sowing mixtures of 6 species, drawn from a pool of 19 species naturally coexisting in central European mesic meadows. The mixtures were designed to cover four independent combinations of high and low FD and PD. Species covers were estimated in spring and late summer over two growing seasons. We then assessed the establishment success of colonizers as a function of their mean traits and phylogenetic distance to the resident (i.e. sown) communities, as well as the resistance of the resident communities to natural colonizers as a function of their functional and phylogenetic structure. Results generally indicated a temporal shift regarding which trait values made a colonizer successful, from an acquisitive strategy in early stages to a more conservative trait syndrome in later stages. FD decreased community resistance to natural colonization. However, PD tempered this effect: with high PD, FD was not significant, suggesting complementary information between these two components of biodiversity. On average, colonizing species were more functionally distant from the resident species in sown communities with high functional diversity, i.e. those that were more colonized. Synthesis. Our results confirm an interplay between FD and PD during community assembly processes, namely resistance to colonizers, suggesting that these two descriptors of biodiversity only partially overlap in their contribution to the overall ecological structure of a community. The hypothesis that higher FD increases resistance through a more complete use of resources was challenged. R
- Published
- 2019
21. Why There are So Few Species of Aphids, Especially in the Tropics
- Author
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Dixon, A. F. G., Kindlmann, P., Lepš, J., and Holman, J.
- Published
- 1987
22. Variation in Structure of Larix olgensis Stands along the Altitudinal Gradient on Paektu-san, Changbai-shan, North Korea
- Author
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Šrůtek, M. and Lepš, J.
- Published
- 1994
- Full Text
- View/download PDF
23. Functional trait effects on ecosystem stability: assembling the jigsaw puzzle
- Author
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de Bello, Francesco, Lavorel, Sandra, Hallett, Lauren, Valencia, Enrique, Garnier, Eric, Roscher, Christiane, Conti, Luisa, Galland, Thomas, Goberna, Marta, Majekova, M., Montesinos-Navarro, Alicia, Pausas, J. G., Verdú, Miguel, E-Vojtkó, Anna, Götzenberger, Lars, Lepš, J., Generalitat Valenciana, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), and Comunidad de Madrid
- Subjects
Functional diversity and redundancy ,Trait probability density ,Insurance effect ,Community weighted mean ,Compensatory dynamics - Abstract
Under global change, how biological diversity and ecosystem services are maintained in time is a fundamental question. Ecologists have long argued about multiple mechanisms by which local biodiversity might control the temporal stability of ecosystem properties. Accumulating theories and empirical evidence suggest that, together with different population and community parameters, these mechanisms largely operate through differences in functional traits among organisms. We review potential trait-stability mechanisms together with underlying tests and associated metrics. We identify various trait-based components, each accounting for different stability mechanisms, that contribute to buffering, or propagating, the effect of environmental fluctuations on ecosystem functioning. This comprehensive picture, obtained by combining different puzzle pieces of trait-stability effects, will guide future empirical and modeling investigations. This study is the result of an international workshop financed by the Valencian government in Spain (Generalitat Valenciana, reference AORG/2018/) and was supported by Spanish Plan Nacional de I+D+i (project PGC2018-099027-B-I00). E.V. was supported by the 2017 program for attracting and retaining talent of Comunidad de Madrid (no. 2017-T2/ AMB-5406).
- Published
- 2021
24. Benchmarking plant diversity of Palaearctic grasslands and other open habitats
- Author
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Biurrun, I., Pielech, R., Dembicz, I., Gillet, F., Kozub, Ł., Marcenò, C., Reitalu, T., Van Meerbeek, K., Guarino, R., Chytrý, M., Pakeman, R.J., Preislerová, Z., Axmanová, I., Burrascano, S., Bartha, S., Boch, S., Bruun, H.H., Conradi, T., De Frenne, P., Essl, F., Filibeck, G., Hájek, M., Jiménez-Alfaro, B., Kuzemko, A., Molnár, Z., Pärtel, M., Pätsch, R., Prentice, H.C., Roleček, J., Sutcliffe, L.M.E., Terzi, M., Winkler, M., Wu, J., Aćić, S., Acosta, A.T.R., Afif, E., Akasaka, M., Alatalo, J.M., Aleffi, M., Aleksanyan, A., Ali, A., Apostolova, I., Ashouri, P., Bátori, Z., Baumann, E., Becker, T., Belonovskaya, E., Benito Alonso, J.L., Berastegi, A., Bergamini, A., Bhatta, K.P., Bonini, I., Büchler, M.-O., Budzhak, V., Bueno, Á., Buldrini, F., Campos, J.A., Cancellieri, L., Carboni, M., Ceulemans, T., Chiarucci, A., Chocarro, C., Conti, L., Csergő, A.M., Cykowska-Marzencka, B., Czarniecka-Wiera, M., Czarnocka-Cieciura, M., Czortek, P., Danihelka, J., de Bello, F., Deák, B., Demeter, L., Deng, L., Diekmann, M., Dolezal, J., Dolnik, C., Dřevojan, P., Dupré, C., Ecker, K., Ejtehadi, H., Erschbamer, B., Etayo, J., Etzold, J., Farkas, T., Farzam, M., Fayvush, G., Fernández Calzado, M.R., Finckh, M., Fjellstad, W., Fotiadis, G., García-Magro, D., García-Mijangos, I., Gavilán, R.G., Germany, M., Ghafari, S., Giusso del Galdo, G.P., Grytnes, J.-A., Güler, B., Gutiérrez-Girón, A., Helm, A., Herrera, M., Hüllbusch, E.M., Ingerpuu, N., Jägerbrand, A.K., Jandt, U., Janišová, M., Jeanneret, P., Jeltsch, F., Jensen, K., Jentsch, A., Kącki, Z., Kakinuma, K., Kapfer, J., Kargar, M., Kelemen, A., Kiehl, K., Kirschner, P., Koyama, A., Langer, N., Lazzaro, L., Lepš, J., Li, C.-F., Li, F.Y., Liendo, D., Lindborg, R., Löbel, S., Lomba, A., Lososová, Z., Lustyk, P., Luzuriaga, A.L., Ma, W., Maccherini, S., Magnes, M., Malicki, M., Manthey, M., Mardari, C., May, F., Mayrhofer, H., Meier, E.S., Memariani, F., Merunková, K., Michelsen, O., Molero Mesa, J., Moradi, H., Moysiyenko, I., Mugnai, M., Naqinezhad, A., Natcheva, R., Ninot, J.M., Nobis, M., Noroozi, J., Nowak, A., Onipchenko, V., Palpurina, S., Pauli, H., Pedashenko, H., Pedersen, C., Peet, R.K., Pérez-Haase, A., Peters, J., Pipenbaher, N., Pirini, C., Pladevall-Izard, E., Plesková, Z., Potenza, G., Rahmanian, S., Rodríguez-Rojo, M.P., Ronkin, V., Rosati, L., Ruprecht, E., Rusina, S., Sabovljević, M., Sanaei, A., Sánchez, A.M., Santi, F., Savchenko, G., Sebastià, M.T., Shyriaieva, D., Silva, V., Škornik, S., Šmerdová, E., Sonkoly, J., Sperandii, M.G., Staniaszek-Kik, M., Stevens, C., Stifter, S., Suchrow, S., Swacha, G., Świerszcz, S., Talebi, A., Teleki, B., Tichý, L., Tölgyesi, C., Torca, M., Török, P., Tsarevskaya, N., Tsiripidis, I., Turisová, I., Ushimaru, A., Valkó, O., Van Mechelen, C., Vanneste, T., Vasheniak, I., Vassilev, K., Viciani, D., Villar, L., Virtanen, R., Vitasović-Kosić, I., Vojtkó, A., Vynokurov, D., Waldén, E., Wang, Y., Weiser, F., Wen, L., Wesche, K., White, H., Widmer, S., Wolfrum, S., Wróbel, A., Yuan, Z., Zelený, D., Zhao, L., Dengler, J., Biurrun, I., Pielech, R., Dembicz, I., Gillet, F., Kozub, Ł., Marcenò, C., Reitalu, T., Van Meerbeek, K., Guarino, R., Chytrý, M., Pakeman, R.J., Preislerová, Z., Axmanová, I., Burrascano, S., Bartha, S., Boch, S., Bruun, H.H., Conradi, T., De Frenne, P., Essl, F., Filibeck, G., Hájek, M., Jiménez-Alfaro, B., Kuzemko, A., Molnár, Z., Pärtel, M., Pätsch, R., Prentice, H.C., Roleček, J., Sutcliffe, L.M.E., Terzi, M., Winkler, M., Wu, J., Aćić, S., Acosta, A.T.R., Afif, E., Akasaka, M., Alatalo, J.M., Aleffi, M., Aleksanyan, A., Ali, A., Apostolova, I., Ashouri, P., Bátori, Z., Baumann, E., Becker, T., Belonovskaya, E., Benito Alonso, J.L., Berastegi, A., Bergamini, A., Bhatta, K.P., Bonini, I., Büchler, M.-O., Budzhak, V., Bueno, Á., Buldrini, F., Campos, J.A., Cancellieri, L., Carboni, M., Ceulemans, T., Chiarucci, A., Chocarro, C., Conti, L., Csergő, A.M., Cykowska-Marzencka, B., Czarniecka-Wiera, M., Czarnocka-Cieciura, M., Czortek, P., Danihelka, J., de Bello, F., Deák, B., Demeter, L., Deng, L., Diekmann, M., Dolezal, J., Dolnik, C., Dřevojan, P., Dupré, C., Ecker, K., Ejtehadi, H., Erschbamer, B., Etayo, J., Etzold, J., Farkas, T., Farzam, M., Fayvush, G., Fernández Calzado, M.R., Finckh, M., Fjellstad, W., Fotiadis, G., García-Magro, D., García-Mijangos, I., Gavilán, R.G., Germany, M., Ghafari, S., Giusso del Galdo, G.P., Grytnes, J.-A., Güler, B., Gutiérrez-Girón, A., Helm, A., Herrera, M., Hüllbusch, E.M., Ingerpuu, N., Jägerbrand, A.K., Jandt, U., Janišová, M., Jeanneret, P., Jeltsch, F., Jensen, K., Jentsch, A., Kącki, Z., Kakinuma, K., Kapfer, J., Kargar, M., Kelemen, A., Kiehl, K., Kirschner, P., Koyama, A., Langer, N., Lazzaro, L., Lepš, J., Li, C.-F., Li, F.Y., Liendo, D., Lindborg, R., Löbel, S., Lomba, A., Lososová, Z., Lustyk, P., Luzuriaga, A.L., Ma, W., Maccherini, S., Magnes, M., Malicki, M., Manthey, M., Mardari, C., May, F., Mayrhofer, H., Meier, E.S., Memariani, F., Merunková, K., Michelsen, O., Molero Mesa, J., Moradi, H., Moysiyenko, I., Mugnai, M., Naqinezhad, A., Natcheva, R., Ninot, J.M., Nobis, M., Noroozi, J., Nowak, A., Onipchenko, V., Palpurina, S., Pauli, H., Pedashenko, H., Pedersen, C., Peet, R.K., Pérez-Haase, A., Peters, J., Pipenbaher, N., Pirini, C., Pladevall-Izard, E., Plesková, Z., Potenza, G., Rahmanian, S., Rodríguez-Rojo, M.P., Ronkin, V., Rosati, L., Ruprecht, E., Rusina, S., Sabovljević, M., Sanaei, A., Sánchez, A.M., Santi, F., Savchenko, G., Sebastià, M.T., Shyriaieva, D., Silva, V., Škornik, S., Šmerdová, E., Sonkoly, J., Sperandii, M.G., Staniaszek-Kik, M., Stevens, C., Stifter, S., Suchrow, S., Swacha, G., Świerszcz, S., Talebi, A., Teleki, B., Tichý, L., Tölgyesi, C., Torca, M., Török, P., Tsarevskaya, N., Tsiripidis, I., Turisová, I., Ushimaru, A., Valkó, O., Van Mechelen, C., Vanneste, T., Vasheniak, I., Vassilev, K., Viciani, D., Villar, L., Virtanen, R., Vitasović-Kosić, I., Vojtkó, A., Vynokurov, D., Waldén, E., Wang, Y., Weiser, F., Wen, L., Wesche, K., White, H., Widmer, S., Wolfrum, S., Wróbel, A., Yuan, Z., Zelený, D., Zhao, L., and Dengler, J.
- Abstract
Aims: Understanding fine-grain diversity patterns across large spatial extents is fundamental for macroecological research and biodiversity conservation. Using the GrassPlot database, we provide benchmarks of fine-grain richness values of Palaearctic open habitats for vascular plants, bryophytes, lichens and complete vegetation (i.e., the sum of the former three groups). Location: Palaearctic biogeographic realm. Methods: We used 126,524 plots of eight standard grain sizes from the GrassPlot database: 0.0001, 0.001, 0.01, 0.1, 1, 10, 100 and 1,000 m2 and calculated the mean richness and standard deviations, as well as maximum, minimum, median, and first and third quartiles for each combination of grain size, taxonomic group, biome, region, vegetation type and phytosociological class. Results: Patterns of plant diversity in vegetation types and biomes differ across grain sizes and taxonomic groups. Overall, secondary (mostly semi-natural) grasslands and natural grasslands are the richest vegetation type. The open-access file ”GrassPlot Diversity Benchmarks” and the web tool “GrassPlot Diversity Explorer” are now available online (https://edgg.org/databases/GrasslandDiversityExplorer) and provide more insights into species richness patterns in the Palaearctic open habitats. Conclusions: The GrassPlot Diversity Benchmarks provide high-quality data on species richness in open habitat types across the Palaearctic. These benchmark data can be used in vegetation ecology, macroecology, biodiversity conservation and data quality checking. While the amount of data in the underlying GrassPlot database and their spatial coverage are smaller than in other extensive vegetation-plot databases, species recordings in GrassPlot are on average more complete, making it a valuable complementary data source in macroecology.
- Published
- 2021
25. Pladias Database of the Czech flora and vegetation. Pladias – databáze české flóry a vegetace
- Author
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Chytrý, M., Danihelka, J., Kaplan, Z., Wild, J., Holubová, D., Novotný, P., Řezníčková, M., Rohn, M., Dřevojan, P., Grulich, V., Klimešová, J., Lepš, J., Lososová, Z., Pergl, J., Sádlo, J., Šmarda, P., Štěpánková, P., Tichý, L., Axmanová, I., Bartušková, A., Blažek, P., Chrtek jun., J., Fischer, F.M., Guo, W.-Y., Herben, T., Janovský, Z., Konečná, M., Kühn, Ingolf, Moravcová, L., Petřík, P., Pierce, S., Prach, K., Prokešová, H., Štech, M., Těšitel, J., Těšitelová, T., Večeřa, M., Zelený, D., Pyšek, P., Chytrý, M., Danihelka, J., Kaplan, Z., Wild, J., Holubová, D., Novotný, P., Řezníčková, M., Rohn, M., Dřevojan, P., Grulich, V., Klimešová, J., Lepš, J., Lososová, Z., Pergl, J., Sádlo, J., Šmarda, P., Štěpánková, P., Tichý, L., Axmanová, I., Bartušková, A., Blažek, P., Chrtek jun., J., Fischer, F.M., Guo, W.-Y., Herben, T., Janovský, Z., Konečná, M., Kühn, Ingolf, Moravcová, L., Petřík, P., Pierce, S., Prach, K., Prokešová, H., Štech, M., Těšitel, J., Těšitelová, T., Večeřa, M., Zelený, D., and Pyšek, P.
- Abstract
The Pladias (Plant Diversity Analysis and Synthesis) Database of the Czech Flora and Vegetation was developed by the Pladias project team in 2014–2018 and has been continuously updated since then. The flora section of the database contains critically revised information on the Czech vascular flora, including 13.6 million plant occurrence records, which are dynamically displayed in maps, and data on 120 plant characteristics (traits, environmental associations and other information), divided into the sections: (1) Habitus and growth type, (2) Leaf, (3) Flower, (4) Fruit, seed and dispersal, (5) Belowground organs and clonality, (6) Trophic mode, (7) Karyology, (8) Taxon origin, (9) Ecological indicator values, (10) Habitat and sociology, (11) Distribution and frequency, and (12) Threats and protection. The vegetation section of the database contains information on Czech vegetation types extracted from the monograph Vegetation of the Czech Republic. The data are supplemented by national botanical bibliographies, electronic versions of the standard national flora and vegetation monographs, a database of more than 19,000 pictures of plant taxa and vegetation types, and digital maps (shapefiles) with botanical information. The data from the database are available online on a public portal www.pladias.cz, which also provides download options for various datasets and online identification keys to the species and vegetation types of the Czech Republic. In this paper, we describe the general scope, structure and content of the database, and details of the data on plant characteristics. To illustrate the data and describe the main geographic patterns in selected plant characteristics, we provide maps of mean values of numerical characteristics or proportions of categories for categorical characteristics on the map of the country in a grid of 5 longitudinal × 3 latitudinal minutes (approximately 6.0 km × 5.5 km). We also summarize the main variation patterns in the functional
- Published
- 2021
26. Functional trait effects on ecosystem stability: assembling the jigsaw puzzle
- Author
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de Bello, F., Lavorel, S., Hallett, L.M., Valencia, E., Garnier, E., Roscher, Christiane, Conti, L., Galland, T., Goberna, M., Májeková, M., Montesinos-Navarro, A., Pausas, J.G., Verdú, M., Vojtkó, A.E., Götzenberger, L., Lepš, J., de Bello, F., Lavorel, S., Hallett, L.M., Valencia, E., Garnier, E., Roscher, Christiane, Conti, L., Galland, T., Goberna, M., Májeková, M., Montesinos-Navarro, A., Pausas, J.G., Verdú, M., Vojtkó, A.E., Götzenberger, L., and Lepš, J.
- Abstract
Under global change, how biological diversity and ecosystem services are maintained in time is a fundamental question. Ecologists have long argued about multiple mechanisms by which local biodiversity might control the temporal stability of ecosystem properties. Accumulating theories and empirical evidence suggest that, together with different population and community parameters, these mechanisms largely operate through differences in functional traits among organisms. We review potential trait-stability mechanisms together with underlying tests and associated metrics. We identify various trait-based components, each accounting for different stability mechanisms, that contribute to buffering, or propagating, the effect of environmental fluctuations on ecosystem functioning. This comprehensive picture, obtained by combining different puzzle pieces of trait-stability effects, will guide future empirical and modeling investigations.
- Published
- 2021
27. Benchmarking plant diversity of Palaearctic grasslands and other open habitats
- Author
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Bavarian Research Foundation, International Association for Vegetation Science, Eusko Jaurlaritza, Czech Science Foundation, Estonian Research Council, Scottish Government's Rural and Environment Science and Analytical Services, Ministero dell'Istruzione, dell'Università e della Ricerca, Agencia Estatal de Investigación (España), Science and Technology Center in Ukraine, Swedish Research Council for Environment, Agricultural Sciences and Spatial Planning, Swedish Institute, Foundation for Introducing Talent of Nanjing University of Information Science and Technology, Hebei Province, Academy of Sciences of the Czech Republic, Hungarian Academy of Sciences, Tyrolean Science Fund, Austrian Academy of Sciences, University of Innsbruck, Ministerio de Economía y Competitividad (España), Comunidad de Madrid, National Geographic Society, Slovak Academy of Sciences, Fundação para a Ciência e a Tecnologia (Portugal), National Science Centre (Poland), Russian Science Foundation, University of Latvia Foundation, Slovenian Research Agency, Biurrun, Idoia, Pielech, Remigiusz, Dembicz, Iwona, Gillet, François, Kozub, Łukasz, Marcenò, Corrado, Reitalu, Triin, Meerbeek, Koenraad Van, Guarino, Riccardo, Chytrý, Milan, Pakeman, Robin J., Kargar, Mansoureh, Kelemen, András, Kiehl, Kathrin, Kirschner, Philipp, Koyama, Asuka, Swacha, Grzegorz, Langer, Nancy, Lazzaro, Lorenzo, Lepš, J., Pauli, Harald, Molnár, Zsolt, Axmanová, Irena, Li, Ching-Feng, Yonghong Li, Frank, Liendo, Diego, Löbel, Swantje, Lomba, Angela, Lososová, Zdeňka, Świerszcz, Sebastian, Lustyk, Pavel, Luzuriaga, Arantzazu L., Pärtel, Meelis, Tichý, Lubomír, Ma, Wenhong, Maccherini, Simona, Burrascano, Sabina, Magnes, Martin, Malicki, Marek, Manthey, Michael, Mardari, Constantin, May, Felix, Talebi, Amir, Pätsch, Ricarda, Mayrhofer, Helmut, Chiarucci, A., Seraina Meier, Eliane, Memariani, Farshid, Merunková, Kristina, Michelsen, Ottar, Bartha, Sándor, Molero Mesa, Joaquín, Moradi, Halime, Moysiyenko, Ivan, Prentice, Honor C., Mugnai, Michele, Teleki, Balázs, Pedashenko, Hristo, Naqinezhad, Alireza, Pedersen, Christian, Peet, Robert K., Pérez-Haase, A., Peters, Jan, Pipenbaher, Nataša, Pirini, Chrisoula, Roleček, Jan, Bruun, Hans Henrik, Pladevall-Izard, Eulàlia, Plesková, Zuzana, Chocarro, Cristina, Essl, Franz, Potenza, Giovanna, Rahmanian, Soroor, Rodríguez-Rojo, María Pilar, Ronkin, Vladimir, Rosati, Leonardo, Janišová, Monika, Ruprecht, Eszter, Rusina, Solvita, Sabovljevic, Marko, Conradi, Timo, Conti, Luisa, Sanaei, Anvar, Hüllbusch, Elisabeth M., Sánchez, Ana M., Santi, Francesco, Savchenko, Galina, Sutcliffe, Laura M. E., Sebastià, María Teresa, Shyriaieva, Dariia, Silva, Vasco, Škornik, Sonja, Šmerdová, Eva, Csergő, Anna Mária, Sonkoly, Judit, De Frenne, Pieter, Tölgyesi, Csaba, Gaia Sperandii, Marta, Terzi, Massimo, Torca, Marta, Török, Péter, Tsarevskaya, Nadezda, Tsiripidis, Ioannis, Turisová, Ingrid, Ushimaru, Atushi, Cykowska-Marzencka, Beata, Valkó, Orsolya, Van Mechelen, Carmen, Vanneste, Thomas, Winkler, Manuela, Ingerpuu, Nele, Filibeck, Goffredo, Vasheniak, Iuliia, Vassilev, Kiril, Viciani, Daniele, Villar Pérez, Luis, Virtanen, Risto, Czarniecka-Wiera, Marta, Vitasović-Kosić, Ivana, Vojtkó, András, de Bello, Francesco, Vynokurov, Denys, Waldén, Emelie, Jägerbrand, Annika K., Wang, Yun, Hájek, Michal, Weiser, Frank, Wen, Lu, Wesche, Karsten, Czortek, Patryk, White, Hannah, Natcheva, Rayna, Widmer, Stefan, Wolfrum, Sebastian, Wróbel, Anna, Yuan, Zuoqiang, Jand, Ute, Zelený, David, Zhao, Liqing, Jiménez Alfaro, Borja, Dengler, Jürgen, Danihelka, Jiří, Wu, Jianshuang, Kuzemko, Anna, Aćić, Svetlana, Acosta, Rosario, Afif, Elias, Akasaka, Munemitsu, Alatalo, Juha M., Aleffi, Michele, Jeanneret, Philippe, Aleksanyan, Alla, Ali, Arshad, Ninot, Josep M., Jentsch, Anke, Apostolova, Iva, Ashouri, Parvaneh, Bátori, Zoltán, Baumann, Esther, Becker, Thomas, Belonovskaya, Elena, Benito Alonso, José Luis, Berastegi, Asun, Jeltsch, Florian, Nobis, Marcin, Bergamini, Ariel, Staniaszek-Kik, Monika, Prasad, Kuber, Bonini, Ilaria, Büchler, Marc-Olivier, Budzhak, Vasyl, Bueno, Álvaro, Buldrini, Fabrizio, Campos, Juan Antonio, Cancellieri, Laura, Noroozi, Jalil, Carboni, Marta, Jensen, Kai, Deák. Balázs, Ceulemans, Tobías, Demeter, László, Deng, Lei, Diekmann, Martin, Doležal, Jiří, Dolnik, Christian, Dřevojan, Pavel, Nowak, Arkadiusz, Dupré, Cecilia, Ecker, Klaus, Ejtehadi, Hamid, Stevens, Carly, Kącki, Zygmunt, Erschbamer, Brigitta, Etayo, Javier, Etzold, Jonathan, Farkas, Tünde, Farzam, Mohammad, Boch, Steffen, Fayvush, George, Fernández Calzado, María Rosa, Finckh, Manfred, Fjellstad, Wendy, Stifter, Simon, Fotiadis, Georgios, Preislerová, Zdenka, García-Magro, Daniel, García-Mijangos, Itziar, Gavilán, Rosario G., Onipchenko, Vladimir G., Germany, Markus, Ghafari, Sahar, Giusso del Galdo, Gian Pietro, Grytnes, John-Arvid, Güler, Behlül, Suchrow, Sigrid, Gutiérrez-Girón, Alba, Helm, Aveliina, Kakinuma, Kaoru, Herrera, Mercedes, Palpurina, Salza, Kapfer, Jutta, Bavarian Research Foundation, International Association for Vegetation Science, Eusko Jaurlaritza, Czech Science Foundation, Estonian Research Council, Scottish Government's Rural and Environment Science and Analytical Services, Ministero dell'Istruzione, dell'Università e della Ricerca, Agencia Estatal de Investigación (España), Science and Technology Center in Ukraine, Swedish Research Council for Environment, Agricultural Sciences and Spatial Planning, Swedish Institute, Foundation for Introducing Talent of Nanjing University of Information Science and Technology, Hebei Province, Academy of Sciences of the Czech Republic, Hungarian Academy of Sciences, Tyrolean Science Fund, Austrian Academy of Sciences, University of Innsbruck, Ministerio de Economía y Competitividad (España), Comunidad de Madrid, National Geographic Society, Slovak Academy of Sciences, Fundação para a Ciência e a Tecnologia (Portugal), National Science Centre (Poland), Russian Science Foundation, University of Latvia Foundation, Slovenian Research Agency, Biurrun, Idoia, Pielech, Remigiusz, Dembicz, Iwona, Gillet, François, Kozub, Łukasz, Marcenò, Corrado, Reitalu, Triin, Meerbeek, Koenraad Van, Guarino, Riccardo, Chytrý, Milan, Pakeman, Robin J., Kargar, Mansoureh, Kelemen, András, Kiehl, Kathrin, Kirschner, Philipp, Koyama, Asuka, Swacha, Grzegorz, Langer, Nancy, Lazzaro, Lorenzo, Lepš, J., Pauli, Harald, Molnár, Zsolt, Axmanová, Irena, Li, Ching-Feng, Yonghong Li, Frank, Liendo, Diego, Löbel, Swantje, Lomba, Angela, Lososová, Zdeňka, Świerszcz, Sebastian, Lustyk, Pavel, Luzuriaga, Arantzazu L., Pärtel, Meelis, Tichý, Lubomír, Ma, Wenhong, Maccherini, Simona, Burrascano, Sabina, Magnes, Martin, Malicki, Marek, Manthey, Michael, Mardari, Constantin, May, Felix, Talebi, Amir, Pätsch, Ricarda, Mayrhofer, Helmut, Chiarucci, A., Seraina Meier, Eliane, Memariani, Farshid, Merunková, Kristina, Michelsen, Ottar, Bartha, Sándor, Molero Mesa, Joaquín, Moradi, Halime, Moysiyenko, Ivan, Prentice, Honor C., Mugnai, Michele, Teleki, Balázs, Pedashenko, Hristo, Naqinezhad, Alireza, Pedersen, Christian, Peet, Robert K., Pérez-Haase, A., Peters, Jan, Pipenbaher, Nataša, Pirini, Chrisoula, Roleček, Jan, Bruun, Hans Henrik, Pladevall-Izard, Eulàlia, Plesková, Zuzana, Chocarro, Cristina, Essl, Franz, Potenza, Giovanna, Rahmanian, Soroor, Rodríguez-Rojo, María Pilar, Ronkin, Vladimir, Rosati, Leonardo, Janišová, Monika, Ruprecht, Eszter, Rusina, Solvita, Sabovljevic, Marko, Conradi, Timo, Conti, Luisa, Sanaei, Anvar, Hüllbusch, Elisabeth M., Sánchez, Ana M., Santi, Francesco, Savchenko, Galina, Sutcliffe, Laura M. E., Sebastià, María Teresa, Shyriaieva, Dariia, Silva, Vasco, Škornik, Sonja, Šmerdová, Eva, Csergő, Anna Mária, Sonkoly, Judit, De Frenne, Pieter, Tölgyesi, Csaba, Gaia Sperandii, Marta, Terzi, Massimo, Torca, Marta, Török, Péter, Tsarevskaya, Nadezda, Tsiripidis, Ioannis, Turisová, Ingrid, Ushimaru, Atushi, Cykowska-Marzencka, Beata, Valkó, Orsolya, Van Mechelen, Carmen, Vanneste, Thomas, Winkler, Manuela, Ingerpuu, Nele, Filibeck, Goffredo, Vasheniak, Iuliia, Vassilev, Kiril, Viciani, Daniele, Villar Pérez, Luis, Virtanen, Risto, Czarniecka-Wiera, Marta, Vitasović-Kosić, Ivana, Vojtkó, András, de Bello, Francesco, Vynokurov, Denys, Waldén, Emelie, Jägerbrand, Annika K., Wang, Yun, Hájek, Michal, Weiser, Frank, Wen, Lu, Wesche, Karsten, Czortek, Patryk, White, Hannah, Natcheva, Rayna, Widmer, Stefan, Wolfrum, Sebastian, Wróbel, Anna, Yuan, Zuoqiang, Jand, Ute, Zelený, David, Zhao, Liqing, Jiménez Alfaro, Borja, Dengler, Jürgen, Danihelka, Jiří, Wu, Jianshuang, Kuzemko, Anna, Aćić, Svetlana, Acosta, Rosario, Afif, Elias, Akasaka, Munemitsu, Alatalo, Juha M., Aleffi, Michele, Jeanneret, Philippe, Aleksanyan, Alla, Ali, Arshad, Ninot, Josep M., Jentsch, Anke, Apostolova, Iva, Ashouri, Parvaneh, Bátori, Zoltán, Baumann, Esther, Becker, Thomas, Belonovskaya, Elena, Benito Alonso, José Luis, Berastegi, Asun, Jeltsch, Florian, Nobis, Marcin, Bergamini, Ariel, Staniaszek-Kik, Monika, Prasad, Kuber, Bonini, Ilaria, Büchler, Marc-Olivier, Budzhak, Vasyl, Bueno, Álvaro, Buldrini, Fabrizio, Campos, Juan Antonio, Cancellieri, Laura, Noroozi, Jalil, Carboni, Marta, Jensen, Kai, Deák. Balázs, Ceulemans, Tobías, Demeter, László, Deng, Lei, Diekmann, Martin, Doležal, Jiří, Dolnik, Christian, Dřevojan, Pavel, Nowak, Arkadiusz, Dupré, Cecilia, Ecker, Klaus, Ejtehadi, Hamid, Stevens, Carly, Kącki, Zygmunt, Erschbamer, Brigitta, Etayo, Javier, Etzold, Jonathan, Farkas, Tünde, Farzam, Mohammad, Boch, Steffen, Fayvush, George, Fernández Calzado, María Rosa, Finckh, Manfred, Fjellstad, Wendy, Stifter, Simon, Fotiadis, Georgios, Preislerová, Zdenka, García-Magro, Daniel, García-Mijangos, Itziar, Gavilán, Rosario G., Onipchenko, Vladimir G., Germany, Markus, Ghafari, Sahar, Giusso del Galdo, Gian Pietro, Grytnes, John-Arvid, Güler, Behlül, Suchrow, Sigrid, Gutiérrez-Girón, Alba, Helm, Aveliina, Kakinuma, Kaoru, Herrera, Mercedes, Palpurina, Salza, and Kapfer, Jutta
- Abstract
Aims: Understanding fine-grain diversity patterns across large spatial extents is fundamental for macroecological research and biodiversity conservation. Using the GrassPlot database, we provide benchmarks of fine-grain richness values of Palaearctic open habitats for vascular plants, bryophytes, lichens and complete vegetation (i.e., the sum of the former three groups). Location: Palaearctic biogeographic realm. Methods: We used 126,524 plots of eight standard grain sizes from the GrassPlot database: 0.0001, 0.001, 0.01, 0.1, 1, 10, 100 and 1,000 m and calculated the mean richness and standard deviations, as well as maximum, minimum, median, and first and third quartiles for each combination of grain size, taxonomic group, biome, region, vegetation type and phytosociological class. Results: Patterns of plant diversity in vegetation types and biomes differ across grain sizes and taxonomic groups. Overall, secondary (mostly semi-natural) grasslands and natural grasslands are the richest vegetation type. The open-access file ”GrassPlot Diversity Benchmarks” and the web tool “GrassPlot Diversity Explorer” are now available online (https://edgg.org/databases/GrasslandDiversityExplorer) and provide more insights into species richness patterns in the Palaearctic open habitats. Conclusions: The GrassPlot Diversity Benchmarks provide high-quality data on species richness in open habitat types across the Palaearctic. These benchmark data can be used in vegetation ecology, macroecology, biodiversity conservation and data quality checking. While the amount of data in the underlying GrassPlot database and their spatial coverage are smaller than in other extensive vegetation-plot databases, species recordings in GrassPlot are on average more complete, making it a valuable complementary data source in macroecology.
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- 2021
28. Functional trait effects on ecosystem stability: assembling the jigsaw puzzle
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Generalitat Valenciana, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Comunidad de Madrid, de Bello, Francesco, Lavorel, Sandra, Hallett, Lauren, Valencia, Enrique, Garnier, Eric, Roscher, Christiane, Conti, Luisa, Galland, Thomas, Goberna, M., Majekova, M., Montesinos-Navarro, Alicia, Pausas, J. G., Verdú, Miguel, E-Vojtkó, Anna, Götzenberger, Lars, Lepš, J., Generalitat Valenciana, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Comunidad de Madrid, de Bello, Francesco, Lavorel, Sandra, Hallett, Lauren, Valencia, Enrique, Garnier, Eric, Roscher, Christiane, Conti, Luisa, Galland, Thomas, Goberna, M., Majekova, M., Montesinos-Navarro, Alicia, Pausas, J. G., Verdú, Miguel, E-Vojtkó, Anna, Götzenberger, Lars, and Lepš, J.
- Abstract
Under global change, how biological diversity and ecosystem services are maintained in time is a fundamental question. Ecologists have long argued about multiple mechanisms by which local biodiversity might control the temporal stability of ecosystem properties. Accumulating theories and empirical evidence suggest that, together with different population and community parameters, these mechanisms largely operate through differences in functional traits among organisms. We review potential trait-stability mechanisms together with underlying tests and associated metrics. We identify various trait-based components, each accounting for different stability mechanisms, that contribute to buffering, or propagating, the effect of environmental fluctuations on ecosystem functioning. This comprehensive picture, obtained by combining different puzzle pieces of trait-stability effects, will guide future empirical and modeling investigations.
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- 2021
29. Ecological differentiation of Carex species coexisting in a wet meadow: Comparison of pot and field experiments
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Czech Science Foundation, Università degli Studi di Ferrara, Tempus Public Foundation, National Research, Development and Innovation Office (Hungary), Tammaru, Keily, Košnar, Jan, Abbas, Amira Fatime, Barta, Karola Anna, de Bello, Francesco, Harrison, Stefan, Degli, Emilia Innocenti, Kiss, Réka, Lukács, Katalin, Neumann, Szilvia Márta, Wagia, Hayden, Puy, J., Lepš, J., Czech Science Foundation, Università degli Studi di Ferrara, Tempus Public Foundation, National Research, Development and Innovation Office (Hungary), Tammaru, Keily, Košnar, Jan, Abbas, Amira Fatime, Barta, Karola Anna, de Bello, Francesco, Harrison, Stefan, Degli, Emilia Innocenti, Kiss, Réka, Lukács, Katalin, Neumann, Szilvia Márta, Wagia, Hayden, Puy, J., and Lepš, J.
- Abstract
Competitive exclusion is to be expected between phylogenetically similar species that share traits and resources. However, species may overcome this, either through differentiation of their responses to biotic and abiotic conditions, or by trait differentiation, thus enabling their coexistence. We identified differences in phenotypic traits between seven coexisting Carex species and their responses to competition and fertilization in pot experiments, before using long-term field experiments to generate responses of the Carex species to fertilization and mowing and to illustrate temporal variability between species. Finally, we assessed how effective the results of the pot experiment were at predicting species responses in the field. In pot experiments, we found that species responded more to competition than to fertilization. Notably, all species showed similar responses to these factors in the pot experiments. Fertilization decreased the root:shoot ratio, whilst competition decreased growth-related characteristics such as total biomass, irrespective of the species. Differences among species were only found in their clonal response to competition, namely rhizome production and generation rate of new ramets. These findings support the idea that different clonal growth strategies may facilitate niche partitioning of Carex species. Species responses measured from pot experiments were poor predictors of their responses in the field experiment. Nevertheless, we confirmed the prediction that, over time, Carex species with lower growth rates in pot experiments showed more stable biomass production than in the field. We suggest that differences in clonal traits and temporal dynamics support the ability of Carex species to avoid competitive exclusion, enabling their coexistence.
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- 2021
30. Towards a more balanced combination of multiple traits when computing functional differences between species
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Czech Science Foundation, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), de Bello, Francesco, Botta-Dukát, Zoltán, Lepš, J., Fibich, Pavel, Czech Science Foundation, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), de Bello, Francesco, Botta-Dukát, Zoltán, Lepš, J., and Fibich, Pavel
- Abstract
Functional trait differences between species are key drivers of community assembly and ecosystem functioning. Quantifying these differences routinely requires using approaches like the Gower distance to combine various types of traits into a multi-trait dissimilarity. Without special care, the Gower distance can however produce a multi-trait dissimilarity with a disproportional contribution of certain traits, particularly categorical traits and bundle of correlated traits reflecting similar ecological functions. These effects persist even after applying multivariate analyses traditionally used to reduce trait dimensionality. We propose the ‘gawdis’ R function, and corresponding package, to produce multi-trait dissimilarity with more uniform contributions of different traits, including fuzzy coded ones. The approach is based on minimizing the differences in the correlation between the dissimilarity of each trait, or groups of traits, and the multi-trait dissimilarity. This is done using either an analytical or a numerical solution, both available in the function. Properly taking into account the contribution of multiple traits into multi-trait dissimilarity is key for interpreting the ecological effects of complex species differences. The gawdis r package in CRAN can be further applied to improve equitability in distance-based measures in other field of research, such as social sciences or marketing surveys, which routinely analyse mixed type data.
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- 2021
31. Analysis of CLIWA-NET intensive operation period data as part of the monitoring activities at the German Meteorological Service site Lindenberg
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Güldner, J. and Leps, J.-P.
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- 2005
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32. Trait probability density (TPD): measuring functional diversity across scales based on TPD with R
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Estonian Research Council, European Commission, Carmona, Carlos P., de Bello, Francesco, Mason, Norman W. H., Lepš, J., Estonian Research Council, European Commission, Carmona, Carlos P., de Bello, Francesco, Mason, Norman W. H., and Lepš, J.
- Abstract
Functional diversity (FD) has the potential to address many ecological questions, from impacts of global change on biodiversity to ecological restoration. There are several methods estimating the different components of FD. However, most of these methods can only be computed at limited spatial scales and cannot account for intraspecific trait variability (ITV), despite its significant contribution to FD. Trait probability density (TPD) functions (which explicitly account for ITV) reflect the probabilistic nature of niches. By doing so, the TPD approach reconciles existing methods for estimating FD within a unifying framework, allowing FD to be partitioned seamlessly across multiple scales (from individuals to species, and from local to global scales), and accounting for ITV. We present methods to estimate TPD functions at different spatial scales and probabilistic implementations of several FD concepts, including the primary components of FD (functional richness, evenness, and divergence), functional redundancy, functional rarity, and solutions to decompose beta FD into nested and unique components. The TPD framework has the potential to unify and expand analyses of functional ecology across scales, capturing the probabilistic and multidimensional nature of FD. The R package TPD (https://CRAN.R-project.org/package=TPD) will allow users to achieve more comparative results across regions and case studies.
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- 2019
33. A novel method to predict dark diversity using unconstrained ordination analysis
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Czech Science Foundation, Academy of Sciences of the Czech Republic, Brown, Joel J. [0000-0002-3608-6745], Brown, Joel J., Mennicken, Sophie, Massante, Jhonny C., Dijoux, Samuel, Telea, Alexandra, Benedek, Ana M., Götzenberger, Lars, Majekova, M., Lepš, J., Šmilauer, Petr, Hrček, Jan, de Bello, Francesco, Czech Science Foundation, Academy of Sciences of the Czech Republic, Brown, Joel J. [0000-0002-3608-6745], Brown, Joel J., Mennicken, Sophie, Massante, Jhonny C., Dijoux, Samuel, Telea, Alexandra, Benedek, Ana M., Götzenberger, Lars, Majekova, M., Lepš, J., Šmilauer, Petr, Hrček, Jan, and de Bello, Francesco
- Abstract
[Questions] Species pools are the product of complex ecological and evolutionary mechanisms, operating over a range of spatial scales. Here, we focus on species absent from local sites but with the potential to establish within communities — known as dark diversity. Methods for estimating dark diversity are still being developed and need to be compared, as well as tested for the type, and amount, of reference data needed to calibrate these methods. [Location] South Bohemia (48°58′ N, 14°28′ E) and Železné Hory (49°52′ N, 15°34′ E), Czech Republic. [Method] We compared a widely accepted algorithm to estimate species pools (Beals smoothing index, based on species co-occurrence) against a novel method based on an unconstrained ordination (UNO). Following previous work, we used spatially nested sampling for target plots, with the dark diversity estimates computed from smaller plots validated against additional species present in larger plots, and a reference dataset (Czech National Phytosociological Database of >30,000 plots as global reference data). We determined which method provides the best estimate of dark diversity with an index termed the “Success Rate Index”. [Results] When using the whole reference dataset (national scale), both UNO and Beals provided comparable predictions of dark diversity that were better than null expectations based on species frequency. However, when predicting from regionally restricted spatial scales, UNO performed significantly better than Beals. UNO also tended to detect less common species better than Beals. The success rate of combining UNO and Beals slightly outperformed the results obtained from the single methods, but only with the largest reference dataset. [Conclusions] The UNO method provides a consistently reliable estimate of dark diversity, particularly when the reference dataset is size-limited. For future calculations, we urge caution regarding the choice of dark diversity methods with respect to the reference data availa
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- 2019
34. Accounting for long-term directional trends on year-to-year synchrony in species fluctuations
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Czech Science Foundation, Lepš, J., Götzenberger, Lars, Valencia, Enrique, de Bello, Francesco, Czech Science Foundation, Lepš, J., Götzenberger, Lars, Valencia, Enrique, and de Bello, Francesco
- Abstract
What determines the stability of communities under environmental fluctuations remains one of the most debated questions in ecology. Scholars generally agree that the similarity in year-to-year fluctuations between species is an important determinant of this stability. Concordant fluctuations in species abundances through time (synchrony) decrease stability while discordance in fluctuations (anti-synchrony) should stabilize communities. Researchers have interpreted the community-wide degree of synchrony in temporal fluctuations as the outcome of different processes. However, existing synchrony measures depend not only on year-to-year species fluctuations, but also on long-term directional trends in species composition, for example due to land-use or climate change. The neglected effect of directional trends in species composition could cause an apparent increase in synchrony that is not due to year-to-year fluctuations, as species that simultaneously increase (or decrease) in abundance over time will appear correlated, even if they fluctuate discordantly from year to year. The opposite pattern is also conceivable, where different species show contrasting trends in their abundances, thus overestimating year-to-year anti-synchrony. Therefore, trends in species composition may limit our understanding of potential ecological mechanisms behind synchrony between species. We propose two easily implementable solutions, with corresponding R functions, for testing and accounting for the effect of trends in species composition on overall synchrony. The first approach is based on computing synchrony over the residuals of fitted species trends over time. The second approach, applicable to already existing indices, is based on three-terms local variance, i.e. computing variance over three-years-long, movable windows. We demonstrate these methods using simulations and data from real plant communities under long-term directional changes, discussing when one approach can be preferred
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- 2019
35. Applying the dark diversity concept to nature conservation
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Lewis, RJ, de Bello, F, Bennett, JA, Fibich, P, Finerty, GE, Götzenberger, L, Hiiesalu, I, Kasari, L, Lepš, J, Májeková, M, Mudrák, O, Riibak, K, Ronk, A, Rychtecká, T, Vitová, A, and Pärtel, M
- Abstract
Linking diversity to biological processes is central for developing informed and effective conservation decisions. Unfortunately, observable patterns provide only a proportion of the information necessary for fully understanding the mechanisms and processes acting on a particular population or community. We suggest conservation managers use the often overlooked information relative to species absences and pay particular attention to dark diversity (i.e., a set of species that are absent from a site but that could disperse to and establish there, in other words, the absent portion of a habitat-specific species pool). Together with existing ecological metrics, concepts, and conservation tools, dark diversity can be used to complement and further develop conservation prioritization and management decisions through an understanding of biodiversity relativized by its potential (i.e., its species pool). Furthermore, through a detailed understanding of the population, community, and functional dark diversity, the restoration potential of degraded habitats can be more rigorously assessed further and so to the likelihood of successful species invasions. We suggest the application of the dark-diversity concept is currently an underappreciated source of information that is valuable for conservation applications ranging from macroscale conservation prioritization to more locally scaled restoration ecology and the management of invasive species. Introduction Conservation biology has strong scientific underpinnings (e.g. Tansley 1949). Early in its formalisation as a science, the necessity for ecologically relevant metrics for use in quantifying the diversity of plant and animal communities was recognized. Nevertheless, formulating and empirically testing theory to support observed biodiversity patterns has always presented the greater challenge. Linking patterns to processes is absolutely central to nature conservation because it allows one to identify and resolve problems that adversely impact biodiversity (Watt 1947), one of the ultimate goals of conservation. Still, the large number of mechanisms and processes underpinning observed ecological patterns is of such complexity that attributing patterns to processes has been described as an inseparable “mess” (Lawton 1999). However, what if ecological mechanisms and processes can only be partially linked to observable patterns? From this perspective, perhaps it becomes less alarming that observable patterns reflect only a proportion of the bigger picture. It also raises an interesting question. Can knowledge of absences complement the understanding of ecological processes? The recently developed concept of dark diversity (which sets absences within the species-pool framework) (Fig. 1) emphasizes the value of understanding absent species in addition to observed species. Strictly, dark diversity encompasses all species that are currently absent from a site but have the potential to disperse and establish there (Pärtel et al. 2011) (i.e., those species belonging to a site’s habitat-specific species pool, also referred to as the “filtered” species pool [Cornell & Harrison 2014; Zobel 2016]). We considered the state of the art surrounding absent species in ecology, specifically dark diversity, and how including both absent and observed species has vast potential to improve understanding of how biological diversity is governed and maintained. We illustrate our viewpoint by clarifying how measuring, monitoring, and understanding dark diversity can prove beneficial in the context of 3 facets of conservation biology: biodiversity conservation, habitat restoration, and species invasion management.
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- 2017
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36. Community Stability, Complexity and Species Life History Strategies
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Lepš, J., Osbornová-Kosinová, J., and Rejmánek, M.
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- 1982
37. MULTIVARIATE ANALYSIS OF COMPOSITIONAL CHANGES IN COMMUNITIES OF EPHEMEROPTERA (INSECTA) IN THE LABE BASIN, CZECHOSLOVAKIA - A COMPARISON OF METHODS
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Lepš, J., Soldán, T., and Landa, V.
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- 1989
38. CLASSIFICATION OF SEQUENCES IN COMMUNITY ECOLOGY - THREE CASE STUDIES
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Lepš, J., Straškraba, M., Husák, Š., and Boháč, J.
- Published
- 1990
39. On the need for phylogenetic ‘corrections’ in functional trait-based approaches
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de Bello, Francesco, Berg, Matty P., Dias, Andre T. C., Diniz-Filho, Jose Alexandre F., Götzenberger, Lars, Hortal, Joaquín, Ladle, Richard, Lepš, J., de Bello, Francesco, Berg, Matty P., Dias, Andre T. C., Diniz-Filho, Jose Alexandre F., Götzenberger, Lars, Hortal, Joaquín, Ladle, Richard, and Lepš, J.
- Abstract
There is considerable uncertainty about if, and when, phylogenetic information is needed to answer various ecological questions about trait-based ecological studies. It has been recommended that both functional and phylogenetic information should be combined, and some researchers have even suggested that functional information for species should be ‘corrected’ because species are not phylogenetically independent. Here, we address these issues by identifying key types of questions in functional trait-based ecology and discussing the utility of phylogenetic information for answering them, either as a correction or in combination with functional traits. Phylogenetic analyses are identified as essential to answer questions related to the evolution of adaptations to abiotic and biotic conditions. However, we argue that phylogenetic information is not always relevant for functional trait studies, and should not be incorporated into ecological analyses without clear justification. Phylogenetic relatedness between species should not be considered a bias to be corrected, but rather an evolutionary signal that allows results to be interpreted at different evolutionary scales. Furthermore, if traits are conserved, phylogeny can be used as a proxy for missing information on traits and functional trait diversity. We conclude by providing guidelines on when to apply, and how to interpret, results obtained using phylogenetic information for a variety of ecological questions linked to functional traits.
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- 2015
40. Evidence for scale- and disturbance-dependent trait assembly patterns in dry semi-natural grasslands
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de Bello, F., Vandewalle, Marie, Reitalu, T., Lepš, J., Prentice, H.C., Lavorel, S., Sykes, M.T., de Bello, F., Vandewalle, Marie, Reitalu, T., Lepš, J., Prentice, H.C., Lavorel, S., and Sykes, M.T.
- Abstract
The mechanisms driving nonrandom assembly patterns in plant communities have long been of interest in ecological research. Competing ecological theories predict that coexisting species may either be more functionally dissimilar than expected by chance (with functional ‘divergence’ mainly reflecting niche differentiation) or be functionally more similar than expected (with functional ‘convergence’ reflecting either the outcome of environmental filtering or weaker-competitor exclusion effects). Assembly patterns are usually assessed at a single scale and disturbance regime, whereas considering different spatial scales and disturbance regimes may clarify the underlying assembly mechanisms. We tested the prediction that convergence and divergence are scale- and disturbance- dependent in grazed and abandoned species-rich dry grasslands within a 22 km2 landscape in south-eastern Sweden. Convergence and divergence were tested for plant species' traits and phylogenetic relationships at three nested spatial scales: within 412 plots (50 × 50 cm, divided into 10 × 10 cm subplots), within 117 grassland patches (from 0.02 to 11.63 ha) and within the whole landscape (across patches). At the finest scale (10 × 10 cm subplots within plots), coexisting species were more different than expected by chance (divergence), both functionally and phylogenetically, suggesting niche differentiation. At the intermediate scale (50 × 50 cm plots within patches), coexisting species showed convergence, suggesting environmental filtering. No significant deviations from random expectations were detected at the broadest scale (patches within the 22 km2 landscape) – suggesting the prevalence of dispersal limitation at this scale. The fact that nonrandom patterns were particularly evident under grazed conditions is consistent with the predict
- Published
- 2013
41. Potential contribution of natural enemies to patterns of local adaptation in plants
- Author
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Crémieux, L., Bischoff, A., Šmilauerová, M., Lawson, C.S., Mortimer, S.R., Doležal, J., Lanta, V., Edwards, A.R., Brook, A.J., Tscheulin, T., Macel, M., Lepš, J., Müller-Schärer, H., Steinger, T., Crémieux, L., Bischoff, A., Šmilauerová, M., Lawson, C.S., Mortimer, S.R., Doležal, J., Lanta, V., Edwards, A.R., Brook, A.J., Tscheulin, T., Macel, M., Lepš, J., Müller-Schärer, H., and Steinger, T.
- Abstract
Genetic differentiation among plant populations and adaptation to local environmental conditions are well documented. However, few studies have examined the potential contribution of plant antagonists, such as insect herbivores and pathogens, to the pattern of local adaptation. Here, a reciprocal transplant experiment was set up at three sites across Europe using two common plant species, Holcus lanatus and Plantago lanceolata. The amount of damage by the main above-ground plant antagonists was measured: a rust fungus infecting Holcus and a specialist beetle feeding on Plantago, both in low-density monoculture plots and in competition with interspecific neighbours. Strong genetic differentiation among provenances in the amount of damage by antagonists in both species was found. Local provenances of Holcus had significantly higher amounts of rust infection than foreign provenances, whereas local provenances of Plantago were significantly less damaged by the specialist beetle than the foreign provenances. The presence of surrounding vegetation affected the amount of damage but had little influence on the ranking of plant provenances. The opposite pattern of population differentiation in resistance to local antagonists in the two species suggests that it will be difficult to predict the consequences of plant translocations for interactions with organisms of higher trophic levels., Genetic differentiation among plant populations and adaptation to local environmental conditions are well documented. However, few studies have examined the potential contribution of plant antagonists, such as insect herbivores and pathogens, to the pattern of local adaptation. Here, a reciprocal transplant experiment was set up at three sites across Europe using two common plant species, Holcus lanatus and Plantago lanceolata. The amount of damage by the main above-ground plant antagonists was measured: a rust fungus infecting Holcus and a specialist beetle feeding on Plantago, both in low-density monoculture plots and in competition with interspecific neighbours. Strong genetic differentiation among provenances in the amount of damage by antagonists in both species was found. Local provenances of Holcus had significantly higher amounts of rust infection than foreign provenances, whereas local provenances of Plantago were significantly less damaged by the specialist beetle than the foreign provenances. The presence of surrounding vegetation affected the amount of damage but had little influence on the ranking of plant provenances. The opposite pattern of population differentiation in resistance to local antagonists in the two species suggests that it will be difficult to predict the consequences of plant translocations for interactions with organisms of higher trophic levels.
- Published
- 2008
42. Long-term effectiveness of sowing high and low diversity seed mixtures to enhance plant community development on ex-arable fields
- Author
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Lepš, J., Doležal, J., Bezemer, T.M., Brown, V.K., Hedlund, K., Igual Arroyo, M., Jørgensen, H.B., Lawson, C.S., Mortimer, S.R., Peix Geldart, A., Rodríguez Barrueco, C., Santa Regina, I., Smilauer, P., Van der Putten, W.H., Lepš, J., Doležal, J., Bezemer, T.M., Brown, V.K., Hedlund, K., Igual Arroyo, M., Jørgensen, H.B., Lawson, C.S., Mortimer, S.R., Peix Geldart, A., Rodríguez Barrueco, C., Santa Regina, I., Smilauer, P., and Van der Putten, W.H.
- Abstract
Questions: How is succession on ex-arable land affected by sowing high and low diversity mixtures of grassland species as compared to natural succession? How long do effects persist? Location: Experimental plots installed in the Czech Republic, The Netherlands, Spain, Sweden and the United Kingdom. Methods: The experiment was established on ex-arable land, with five blocks, each containing three 10 m × 10 m experimental plots: natural colonization, a low- (four species) and high-diversity (15 species) seed mixture. Species composition and biomass was followed for eight years. Results: The sown plants considerably affected the whole successional pathway and the effects persisted during the whole eight year period. Whilst the proportion of sown species (characterized by their cover) increased during the study period, the number of sown species started to decrease from the third season onwards. Sowing caused suppression of natural colonizing species, and the sown plots had more biomass. These effects were on average larger in the high diversity mixtures. However, the lo Conclusions: The effect of sowing demonstrated dispersal limitation as a factor controlling the rate of early secondary succession. Diversity was important primarily for its ‘insurance effect’: the high diversity mixtures were always able to compensate for the failure of some species. Abbreviations; ED = Euclidian distance; HD = High diversity; LD = Low diversity; NC = Natural colonization, Questions: How is succession on ex-arable land affected by sowing high and low diversity mixtures of grassland species as compared to natural succession? How long do effects persist? Location: Experimental plots installed in the Czech Republic, The Netherlands, Spain, Sweden and the United Kingdom. Methods: The experiment was established on ex-arable land, with five blocks, each containing three 10 m × 10 m experimental plots: natural colonization, a low- (four species) and high-diversity (15 species) seed mixture. Species composition and biomass was followed for eight years. Results: The sown plants considerably affected the whole successional pathway and the effects persisted during the whole eight year period. Whilst the proportion of sown species (characterized by their cover) increased during the study period, the number of sown species started to decrease from the third season onwards. Sowing caused suppression of natural colonizing species, and the sown plots had more biomass. These effects were on average larger in the high diversity mixtures. However, the lo Conclusions: The effect of sowing demonstrated dispersal limitation as a factor controlling the rate of early secondary succession. Diversity was important primarily for its ‘insurance effect’: the high diversity mixtures were always able to compensate for the failure of some species. Abbreviations; ED = Euclidian distance; HD = High diversity; LD = Low diversity; NC = Natural colonization
- Published
- 2007
43. Separating the chance effect from other diversity effects in the functioning of plant communities
- Author
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Lepš, J., Brown, V.K., Len, T.A.D., Gormsen, D., Hedlund, K., Kailova, J., Korthals, G.W., Mortimer, S.R., Rodriguez-Barrueco, C., Roy, J., Santa Regina, I., Van Dijk, C., Van der Putten, W.H., Lepš, J., Brown, V.K., Len, T.A.D., Gormsen, D., Hedlund, K., Kailova, J., Korthals, G.W., Mortimer, S.R., Rodriguez-Barrueco, C., Roy, J., Santa Regina, I., Van Dijk, C., and Van der Putten, W.H.
- Abstract
The effect of plant species diversity on productivity and competitive ability was studied in an experiment carried out simultaneously in five European countries: Czech Republic (CZ), the Netherlands (NL), Sweden (SE), Spain (SP), and United Kingdom (UK). The aim was to separate the 'chance' or 'sampling effect' (increasing the number of sown species increases the probability that a species able 'to do a job' will be included) from the complementarity effect (species-rich communities are better able to exploit resources and to take care of ecosystem functions than species-poor communities). In the experiment, low diversity (LD) and high diversity (HD) mixtures of grassland species were sown into fields taken out of arable cultivation. The HD mixture consisted of five grass species, five legumes and five other forbs. The LD mixtures consisted of two grasses, one legume and one other forb, with different plant species combinations in each replicate block. The design of the experiment was constructed in such a way that the total number of seeds of each species over all the replications was exactly the same in HD and LD treatments, and the total number of grass seeds, leguminous seeds and other forb seeds were the same in both LD and HD. The responses measured were the total above-ground biomass las a measure of productivity) and the average number of naturally establishing species in a plot las a measure of the competitive ability of the mixture), both measured in the third year of the experiment. The results show that, on average, the HD plots performed better (i.e., attained higher biomass, had better weed suppression), but that the best LD mixture was as good as the best HD mixture. On the contrary, the worst LD mixture was always less successful than the worst HD replicate. The performance of particular species in the HD mixtures was a good predictor of the success of a certain species combination in a LD mixture (explaining 61% of variability between particular LD, The effect of plant species diversity on productivity and competitive ability was studied in an experiment carried out simultaneously in five European countries: Czech Republic (CZ), the Netherlands (NL), Sweden (SE), Spain (SP), and United Kingdom (UK). The aim was to separate the 'chance' or 'sampling effect' (increasing the number of sown species increases the probability that a species able 'to do a job' will be included) from the complementarity effect (species-rich communities are better able to exploit resources and to take care of ecosystem functions than species-poor communities). In the experiment, low diversity (LD) and high diversity (HD) mixtures of grassland species were sown into fields taken out of arable cultivation. The HD mixture consisted of five grass species, five legumes and five other forbs. The LD mixtures consisted of two grasses, one legume and one other forb, with different plant species combinations in each replicate block. The design of the experiment was constructed in such a way that the total number of seeds of each species over all the replications was exactly the same in HD and LD treatments, and the total number of grass seeds, leguminous seeds and other forb seeds were the same in both LD and HD. The responses measured were the total above-ground biomass las a measure of productivity) and the average number of naturally establishing species in a plot las a measure of the competitive ability of the mixture), both measured in the third year of the experiment. The results show that, on average, the HD plots performed better (i.e., attained higher biomass, had better weed suppression), but that the best LD mixture was as good as the best HD mixture. On the contrary, the worst LD mixture was always less successful than the worst HD replicate. The performance of particular species in the HD mixtures was a good predictor of the success of a certain species combination in a LD mixture (explaining 61% of variability between particular LD
- Published
- 2001
44. Proceedings of 41th I.A.V.S. Symposium
- Author
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White, P., Mucina, Ladislav, Lepš, J., White, P., Mucina, Ladislav, and Lepš, J.
- Published
- 2000
45. Importance of species abundance for assessment of trait composition: an example based on pollinator communities
- Author
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Bello, F., primary, Lepš, J., additional, Lavorel, S., additional, and Moretti, M., additional
- Published
- 2007
- Full Text
- View/download PDF
46. Plant Functional Types in relation to disturbance and land use: Introduction
- Author
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Rusch, G.M., primary, Pausas, J.G., additional, and Lepš, J., additional
- Published
- 2003
- Full Text
- View/download PDF
47. BOOK REVIEW: Dempster J.P. & McLean I.F.G.: Insect Populations In Theory and in Practice. 19th Symposium of the Royal Entomological Society.
- Author
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LEPŠ, J., primary
- Published
- 2001
- Full Text
- View/download PDF
48. Mechanistic explanations of community structure: Introduction
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Lepš, J., primary, Goldberg, D.E., additional, Herben, T., additional, and Palmer, M., additional
- Published
- 1999
- Full Text
- View/download PDF
49. Establishment ofPicea abiesseedlings in a central European mountain grassland: an experimental study
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Prach, K., primary, Lepš, J., additional, and Michálek, J., additional
- Published
- 1996
- Full Text
- View/download PDF
50. Developing a classifier for the Habitats Directive grassland types in Denmark using species lists for prediction.
- Author
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Ejrnaes, Rasmus, Bruun, Hans Henrik, Aude, Erik, Buchwald, Erik, and Lepš, J.
- Subjects
GRASSLANDS ,VEGETATION classification ,PLANT communities ,VEGETATION mapping ,PLANT classification - Abstract
This paper describes the use of supervised methods for the classification of vegetation. The difference between supervised classification and clustering is outlined, with reference to their current use in vegetation science. In the paper we describe the classification of Danish grasslands according to the Habitats Directive of the European Union, and demonstrate how a supervised classification can be used to achieve a standardized and statistical interpretation within a local flora. We thereby offer a statistical solution to the legal problem of protection of certain selected habitat types. The Habitats Directive protects three types of Danish grassland habitats, whereas two remaining types fall outside protection. A classification model is developed, using available Danish grassland data, for the discrimination of these five types based on their species composition. This new Habitats Directive classification is compared to a previously published unsupervised classification of Danish grassland vegetation. An indicator species analysis is used to find significant indicator species for the three protected habitat types in Denmark, and these are compared to the characteristic species mentioned in the interpretation manual of the Habitats Directive. Eventually, we discuss the pros and cons of supervised and unsupervised classification and conclude that supervised methods deserve more attention in vegetation science. [ABSTRACT FROM AUTHOR]
- Published
- 2004
- Full Text
- View/download PDF
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