14 results on '"León-Martínez, G."'
Search Results
2. First Report of Hibiscus-infecting cilevirus in Citrus sinensis in Meta and Casanare, Colombia
- Author
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Roy, Avijit, primary, Stone, A. L., additional, León Martínez, G., additional, Hartung, J. S., additional, Wei, G., additional, Mavrodieva, V. A., additional, Nakhla, M. K., additional, Schneider, W. L., additional, and Brlansky, R. H., additional
- Published
- 2018
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3. Avances de investigación en frutales tropicales promisorios para el departamento de Meta
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Orduz Rodríguez, J. O. and León Martínez, G. A.
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Genética vegetal y fitomejoramiento - F30 ,Cultivo - F01 ,Citricos ,Recursos geneticos ,Colecciónes de material genetico ,Frutales ,Viveros ,Material genetico - Abstract
El estudio presenta la recolección de germoplasma divididos en 4 grupos de la siguiente manera: en el grupo 1 se presentan los frutales tradicionales no cultivados en el departamento del Meta, en el grupo 2 se presentan los frutales tropicales promisorios poco conocidos en el mercado como arazá, borojó, chontaduro, cocona y carambolo, en el grupo 3 se presentan los frutales con alta potencialidad en el mercado nacional e internacional como el langostino y el camu-camú y en el grupo 4 se presentan los frutales poco conocidos en los mercados y que no se cultivan en huertos o son de reciente introducción a los Llanos. También se presentan las recomendaciones para la realización de germoplasma de frutales promisorios y exóticos para los Llanos Orientales, entre otros.
- Published
- 2001
4. [Mixed adenoneuroendocrine carcinoma: case report].
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Hernández-Moreno ÁA, Durón-Gutiérrez CE, Serrano-González SP, León-Martínez G, and Arroyo-Del-Castillo JG
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- Humans, Female, Middle Aged, Cecal Neoplasms pathology, Cecal Neoplasms surgery, Ileostomy, Abdomen, Acute etiology, Carcinoma, Neuroendocrine surgery, Carcinoma, Neuroendocrine pathology, Carcinoma, Neuroendocrine diagnostic imaging, Adenocarcinoma surgery, Adenocarcinoma pathology, Colonic Neoplasms surgery, Colonic Neoplasms pathology, Colectomy
- Abstract
Introducción: Mixed adenoneuroendocrine carcinoma is a rare tumor of the gastrointestinal tract with double differentiation into adenomatous and neuroendocrine carcinoma, each component with at least 30%., Case Report: A 60-year-old female with acute abdominal pain. Surgical treatment was decided, finding a tumor at the level of the cecum and ascending colon, a right hemicolectomy and ileostomy were performed., Discussion: Mixed adenoneuroendocrine carcinoma can appear in various organs. They are highly malignant tumors, with a high risk of metastasis., Conclusions: These tumors do not present symptoms or specific radiological or laboratory findings; diagnosis depends on postoperative histopathological and immunohistochemical studies.
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- 2024
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5. Origin and diversification of maize: Two teosintes but different contributions.
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Acosta-Bayona J, León-Martínez G, and Vielle-Calzada JP
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- Genetic Variation, Zea mays genetics, Genes, Plant
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- 2024
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6. Genomic methylation patterns in pre-meiotic gynoecia of wild-type and RdDM mutants of Arabidopsis.
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Ortiz-Vasquez Q, León-Martínez G, Barragán-Rosillo C, González-Orozco E, Deans S, Aldridge B, Vickers M, Feng X, and Vielle-Calzada JP
- Abstract
Introduction: Although DNA methylation patterns are generally considered to be faithfully inherited in Arabidopsis thaliana (Arabidopsis), there is evidence of reprogramming during both male and female gametogenesis. The gynoecium is the floral reproductive organ from which the ovules develop and generate meiotically derived cells that give rise to the female gametophyte. It is not known whether the gynoecium can condition genomic methylation in the ovule or the developing female gametophyte., Methods: We performed whole genome bisulfite sequencing to characterize the methylation patterns that prevail in the genomic DNA of pre-meiotic gynoecia of wild-type and three mutants defective in genes of the RNA-directed DNA methylation pathway (RdDM): ARGONAUTE4 (AGO4), ARGONAUTE9 (AGO9), and RNA-DEPENDENT RNA POLYMERASE6 (RDR6)., Results: By globally analyzing transposable elements (TEs) and genes located across the Arabidopsis genome, we show that DNA methylation levels are similar to those of gametophytic cells rather than those of sporophytic organs such as seedlings and rosette leaves. We show that none of the mutations completely abolishes RdDM, suggesting strong redundancy within the methylation pathways. Among all, ago4 mutation has the strongest effect on RdDM, causing more CHH hypomethylation than ago9 and rdr6. We identify 22 genes whose DNA methylation is significantly reduced in ago4, ago9 and rdr6 mutants, revealing potential targets regulated by the RdDM pathway in premeiotic gyneocia., Discussion: Our results indicate that drastic changes in methylation levels in all three contexts occur in female reproductive organs at the sporophytic level, prior to the alternation of generations within the ovule primordium, offering a possibility to start identifying the function of specific genes acting in the establishment of the female gametophytic phase of the Arabidopsis life cycle., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Ortiz-Vasquez, León-Martínez, Barragán-Rosillo, González-Orozco, Deans, Aldridge, Vickers, Feng and Vielle-Calzada.)
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- 2023
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7. Discriminant analysis and machine learning approach for evaluating and improving the performance of immunohistochemical algorithms for COO classification of DLBCL.
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Perfecto-Avalos Y, Garcia-Gonzalez A, Hernandez-Reynoso A, Sánchez-Ante G, Ortiz-Hidalgo C, Scott SP, Fuentes-Aguilar RQ, Diaz-Dominguez R, León-Martínez G, Velasco-Vales V, Cárdenas-Escudero MA, Hernández-Hernández JA, Santos A, Borbolla-Escoboza JR, and Villela L
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- Adult, Aged, Aged, 80 and over, B-Lymphocytes pathology, Bayes Theorem, Decision Trees, Discriminant Analysis, Female, Humans, Immunohistochemistry methods, Immunohistochemistry statistics & numerical data, Lymphoma, Large B-Cell, Diffuse genetics, Lymphoma, Large B-Cell, Diffuse metabolism, Male, Middle Aged, Algorithms, Gene Expression Profiling methods, Gene Expression Profiling statistics & numerical data, Germinal Center pathology, Lymphoma, Large B-Cell, Diffuse classification, Lymphoma, Large B-Cell, Diffuse pathology, Machine Learning
- Abstract
Background: Diffuse large B-cell lymphoma (DLBCL) is classified into germinal center-like (GCB) and non-germinal center-like (non-GCB) cell-of-origin groups, entities driven by different oncogenic pathways with different clinical outcomes. DLBCL classification by immunohistochemistry (IHC)-based decision tree algorithms is a simpler reported technique than gene expression profiling (GEP). There is a significant discrepancy between IHC-decision tree algorithms when they are compared to GEP., Methods: To address these inconsistencies, we applied the machine learning approach considering the same combinations of antibodies as in IHC-decision tree algorithms. Immunohistochemistry data from a public DLBCL database was used to perform comparisons among IHC-decision tree algorithms, and the machine learning structures based on Bayesian, Bayesian simple, Naïve Bayesian, artificial neural networks, and support vector machine to show the best diagnostic model. We implemented the linear discriminant analysis over the complete database, detecting a higher influence of BCL6 antibody for GCB classification and MUM1 for non-GCB classification., Results: The classifier with the highest metrics was the four antibody-based Perfecto-Villela (PV) algorithm with 0.94 accuracy, 0.93 specificity, and 0.95 sensitivity, with a perfect agreement with GEP (κ = 0.88, P < 0.001). After training, a sample of 49 Mexican-mestizo DLBCL patient data was classified by COO for the first time in a testing trial., Conclusions: Harnessing all the available immunohistochemical data without reliance on the order of examination or cut-off value, we conclude that our PV machine learning algorithm outperforms Hans and other IHC-decision tree algorithms currently in use and represents an affordable and time-saving alternative for DLBCL cell-of-origin identification.
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- 2019
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8. Novel biopesticide based on Erinnyis ello betabaculovirus: characterization and preliminary field evaluation to control Erinnyis ello in rubber plantations.
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Cuartas PE, Villamizar LF, Barrera GP, Ruiz JC, Campos JC, León-Martínez G, and Gómez-Valderrama J
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- Animals, Environment, Controlled, Laboratories, Quality Control, Baculoviridae physiology, Hevea, Moths virology, Pest Control, Biological methods
- Abstract
Background: The hornworn Erinnyis ello is the major pest of natural rubber crops in Colombia, mainly controlled using toxic chemical insecticides. The use of E. ello Betabaculovirus is an environmentally sustainable alternative for its control. The aim of the present work was to characterize a prototype biopesticide formulation and evaluate its efficacy under different conditions., Results: Quality control evaluations of formulated biopesticide revealed that all the parameters evaluated were under the permissible level. The lethal concentrations LC
50 and LC90 of the biopesticide were 4.3 × 103 and 5.5 × 104 occlusion bodies (OBs) mL-1 , respectively. Biopesticide efficacies against second and fourth instar larvae under greenhouse conditions were higher than 80%. Evaluation of two application rates in a clonal garden resulted in 84% and 88% efficacy, comparable to that obtained with the chemical. The biopesticide in a commercial plantation showed efficacies between 74% and 82%. Biopesticide post-application persistence was estimated at least in 1 week under field natural conditions. Results allowed selection of the lowest evaluated dose (1 × 1011 OBs ha-1 ) as the basis for further field evaluations., Conclusion: Formulated ErelGV showed high efficacy to control the hornworm in rubber crops and high potential to be included in integrated pest management programs, thus it could be an interesting alternative to replace agrochemicals. © 2018 Society of Chemical Industry., (© 2018 Society of Chemical Industry.)- Published
- 2019
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9. Immunolocalization to Study ARGONAUTE Proteins in Developing Ovules of the Brassicaceae.
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León-Martínez G, Demesa-Arévalo E, and Vielle-Calzada JP
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- Arabidopsis Proteins genetics, DNA Methylation genetics, Gene Expression Regulation, Plant genetics, Arabidopsis genetics, Argonaute Proteins genetics, Gene Expression Regulation, Developmental genetics, Ovule genetics
- Abstract
Determining the in situ pattern of protein expression is crucial to accurately establish regulatory function and mode of action of any plant developmental program. Here, we describe two immunolocalization procedures that are consistently used to determine subcellular localization of ARGONAUTE proteins in the ovule of the Brassicaceae. The first is performed in resin-embedded semi-thin sections of developing ovules that can be observed under bright-field microscopy. The second is based in polyacrylamide immersion of complete (whole-mounted) gynoecia or ovules that are observed under confocal microscopy. Both procedures have been successfully performed to localize proteins involved in RNA-directed DNA methylation during the development of the anatropous bitegmic ovule in Arabidopsis, Brassica, or Boechera species.
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- 2019
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10. Apomixis in flowering plants: Developmental and evolutionary considerations.
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León-Martínez G and Vielle-Calzada JP
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- Magnoliopsida genetics, Apomixis physiology, Biological Evolution, Gene Expression Regulation, Developmental, Gene Expression Regulation, Plant, Magnoliopsida growth & development, Plant Proteins genetics
- Abstract
Apomixis refers to a set of reproductive mechanisms that invariably rely on avoiding meiotic reduction and fertilization of the egg cell to generate clonal seeds. After having long been considered a strictly asexual oddity leading to extinction, the integration of more than 100 years of embryological, genetic, molecular, and ecological research has revealed apomixis as a widely spread component of the dynamic processes that shape flowering plant evolution. Apomixis involves several flexible and versatile developmental pathways that can be combined within the ovule to produce offspring. Here we review the large body of classic and contemporaneous contributions that have addressed unreduced gamete formation, haploid induction, and parthenogenesis in flowering plants. We emphasize similarities and differences between sexual and apomictic reproduction, and highlight their implications for the evolutionary emergence of asexual reproduction through seeds. On the basis of these comparisons, we propose a model that associates the developmental origin of apomixis to a dynamic epigenetic landscape, in which environmental fluctuations reversibly influence female reproductive development through mechanisms of hybridization and polyploidization., (© 2019 Elsevier Inc. All rights reserved.)
- Published
- 2019
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11. Natural variation in epigenetic pathways affects the specification of female gamete precursors in Arabidopsis.
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Rodríguez-Leal D, León-Martínez G, Abad-Vivero U, and Vielle-Calzada JP
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- Arabidopsis metabolism, Arabidopsis Proteins genetics, Arabidopsis Proteins metabolism, Argonaute Proteins genetics, Argonaute Proteins metabolism, Cell Differentiation genetics, Cell Differentiation physiology, Gametogenesis, Plant genetics, Gametogenesis, Plant physiology, Gene Expression Regulation, Plant genetics, Gene Expression Regulation, Plant physiology, RNA-Dependent RNA Polymerase genetics, RNA-Dependent RNA Polymerase metabolism, Arabidopsis genetics, Arabidopsis physiology, Epigenesis, Genetic genetics
- Abstract
In angiosperms, the transition to the female gametophytic phase relies on the specification of premeiotic gamete precursors from sporophytic cells in the ovule. In Arabidopsis thaliana, a single diploid cell is specified as the premeiotic female gamete precursor. Here, we show that ecotypes of Arabidopsis exhibit differences in megasporogenesis leading to phenotypes reminiscent of defects in dominant mutations that epigenetically affect the specification of female gamete precursors. Intraspecific hybridization and polyploidy exacerbate these defects, which segregate quantitatively in F2 populations derived from ecotypic hybrids, suggesting that multiple loci control cell specification at the onset of female meiosis. This variation in cell differentiation is influenced by the activity of ARGONAUTE9 (AGO9) and RNA-DEPENDENT RNA POLYMERASE6 (RDR6), two genes involved in epigenetic silencing that control the specification of female gamete precursors. The pattern of transcriptional regulation and localization of AGO9 varies among ecotypes, and abnormal gamete precursors in ovules defective for RDR6 share identity with ectopic gamete precursors found in selected ecotypes. Our results indicate that differences in the epigenetic control of cell specification lead to natural phenotypic variation during megasporogenesis. We propose that this mechanism could be implicated in the emergence and evolution of the reproductive alternatives that prevail in flowering plants., (© 2015 American Society of Plant Biologists. All rights reserved.)
- Published
- 2015
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12. Unusual morphologic presentations of blastic plasmacytoid dendritic cell neoplasm: report of two cases misdiagnosed as melanoma and leprosy.
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León-Martínez G, Meillón-García L, Morales-Polanco M, Soler-Montecinos L, and Ortiz-Hidalgo C
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- Aged, Biopsy, Cytodiagnosis, Humans, Male, Dendritic Cells pathology, Diagnostic Errors, Hematologic Neoplasms diagnosis, Leprosy, Lepromatous diagnosis, Melanoma diagnosis, Skin Neoplasms diagnosis
- Abstract
We present 2 cases of blastic plasmacytoid dendritic cell neoplasm (BPDCN) showing unusual histological features. One patient, a 73-year-old male, presented with a nonpruritic macular erythema of the skin on the anterior and posterior chest wall, the biopsy of which was originally diagnosed as malignant melanoma. The neoplastic cells were negative for S100 and HMB45 and strongly positive for CD45, CD4, CD56, and CD123. The final diagnosis was a BPDCN associated with abundant melanin pigment and numerous melanophages. The second patient was a 73-year-old male with a 5-month history of small, slowly enlarging, bruise-like plaques on his limbs and chest. Histologic examination of the skin biopsy revealed an atypical cellular/myxoid infiltrate with numerous macrophages, which was originally diagnosed as consistent with lepromatous leprosy. The atypical cells were immersed in an alcian blue-positive myxoid matrix at pH 2.5. The Fite-Faraco stain was negative. Positive immunoreactivity was demonstrated for CD4, CD56, and CD123. Based on the histopathology and immunohistochemistry findings, a diagnosis of BPDCN with prominent myxoid matrix was rendered.
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- 2014
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13. Reproductive versatility and the epigenetic control of female gametogenesis.
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Vielle-Calzada JP, Hernández-Lagana E, Rodríguez-Leal D, Rodríguez-Arévalo I, León-Martínez G, Abad-Vivero U, Demesa-Arévalo E, Armenta-Medina A, and Alvarez-Mejía C
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- Magnoliopsida cytology, Magnoliopsida genetics, Magnoliopsida physiology, Models, Biological, Ovule cytology, Ovule genetics, Ovule physiology, Reproduction genetics, Epigenesis, Genetic, Gametogenesis, Plant genetics
- Abstract
Each year, plants and animals perform the task of repopulating the planet through patterns of courtship and mating that have a unifying and compelling logic: the production of offspring. Although life of nearly all organisms is organized around sex and breeding, Darwinian thinking focused more on the struggle for existence than on evolutionary significance of this frantic race to reproduce. In Darwin's own words, "We do not know the final cause of sexuality; why new beings should be produced by the union of the two sexual elements. The whole subject is hidden in darkness…" (Darwin 1862). In plants, a major consequence of this search for survival is the evolution of a multitude of reproductive alternatives that have intrigued botanists, geneticists, and evolutionary biologists for more than 100 years. Because sexually derived genetic diversity is interpreted as essential for adaptation, it is often thought that sex is necessary for the perpetuation of a species; however, many organisms--including several hundred families of flowering plants--are going efficiently about propagating their kind without bothering with meiosis and mating. Whereas many plants can undergo vegetative propagation, through the production of stolons, bulbs, or rhizomes, for example, many others have developed methods to produce an embryo from a single cell whose nucleus is not formed by the fusion of two gametes, offering a direct developmental and evolutionary challenge to sexual reproduction. Recent evidence suggests that epigenetic mechanisms that control transcriptional silencing of DNA repetitive elements and heterochromatin are crucial for the acquisition of cell identity in the ovule, opening the possibility that the developmental distinction between sexual development and apomixis might have evolved as an adaptive response to evolutionary forces that modulate structural variation and reproductive versatility in flowering plants.
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- 2012
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14. CHR11, a chromatin-remodeling factor essential for nuclear proliferation during female gametogenesis in Arabidopsis thaliana.
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Huanca-Mamani W, Garcia-Aguilar M, León-Martínez G, Grossniklaus U, and Vielle-Calzada JP
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- Adenosine Triphosphatases, Arabidopsis cytology, Arabidopsis genetics, Arabidopsis Proteins biosynthesis, Arabidopsis Proteins genetics, Cell Nucleus Division genetics, Cell Size, Chromatin Assembly and Disassembly genetics, Chromosomal Proteins, Non-Histone biosynthesis, Chromosomal Proteins, Non-Histone genetics, DNA-Binding Proteins physiology, Gametogenesis genetics, Haploidy, Promoter Regions, Genetic, RNA Interference, RNA, Messenger metabolism, Saccharomyces cerevisiae Proteins physiology, Spores cytology, Spores genetics, Spores physiology, Transcription Factors physiology, Arabidopsis physiology, Arabidopsis Proteins physiology, Cell Nucleus Division physiology, Chromatin Assembly and Disassembly physiology, Chromosomal Proteins, Non-Histone physiology, Gametogenesis physiology
- Abstract
Chromatin-remodeling factors regulate the establishment of transcriptional programs during plant development. Although 42 genes encoding members of the SWI2/SNF2 family have been identified in Arabidopsis thaliana, <10 have been assigned a precise function on the basis of a mutant phenotype, and none have been shown to play a specific role during the gametophytic phase of the plant life cycle. A. thaliana chromatin-remodeling protein 11 (CHR11) encodes an imitation of switch (ISWI)-like chromatin-remodeling protein abundantly expressed during female gametogenesis and embryogenesis in Arabidopsis. To determine the function of CHR11 in wild-type plants, we introduced a hairpin construct leading to the production of double-stranded RNA, which specifically degraded the endogenous CHR11 mRNA by RNA interference (RNAi). Transcription of the RNAi-inducing hairpin RNA was driven by either a constitutive cauliflower mosaic virus 35S promoter (CaMV35S) acting at most stages of the sporophytic phase or a newly identified specific promoter acting at the onset of the female gametophytic phase (pFM1). All adult transformants that constitutively lacked sporophytic CHR11 activity showed reduced plant height and small cotyledonary embryos with limited cell expansion. In contrast, RNAi lines in which CHR11 was specifically silenced at the onset of female gametogenesis (megagametogenesis) had normal height and embryo size but had defective female gametophytes arrested before the completion of the mitotic haploid nuclear divisions. These results show that CHR11 is essential for haploid nuclear proliferation during megagametogenesis and cell expansion during the sporophytic phase, demonstrating the functional versatility of SWI2/SNF2 chromatin-remodeling factors during both generations of the plant life cycle.
- Published
- 2005
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