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The best ideotypes are under mounting pressure due to increased aridity. Understanding the conserved molecular mechanisms that evolve in wild plants adapted to harsh environments is crucial in developing new strategies for agriculture. Yet our knowledge of such mechanisms in wild species is scant. We performed metabolic pathway reconstruction using transcriptome information from 32 Atacama and phylogenetically related species that do not live in Atacama (sister species). We analyzed reaction enrichment to understand the commonalities and differences of Atacama plants. To gain insights into the mechanisms that ensure survival, we compared expressed gene isoform numbers and gene expression patterns between the annotated biochemical reactions from 32 Atacama and sister species. We found biochemical convergences characterized by reactions enriched in at least 50% of the Atacama species, pointing to potential advantages against drought and nitrogen starvation, for instance. These findings suggest that the adaptation in the Atacama Desert may result in part from shared genetic legacies governing the expression of key metabolic pathways to face harsh conditions. Enriched reactions corresponded to ubiquitous compounds common to extreme and agronomic species and were congruent with our previous metabolomic analyses. Convergent adaptive traits offer promising candidates for improving abiotic stress resilience in crop species. [ABSTRACT FROM AUTHOR]

In deserts, water has been singled out as the most important factor for choosing where to settle, but trees were likely an important part of the landscape for hunter- gatherers beyond merely constituting an economic resource. Yet, this critical aspect has not been considered archaeologically. Here, we present the results of mapping and radiocarbon dating of a truly unique archaeological record. Over 150 preserved stumps around five Late Pleistocene/ Early Holocene archaeological campsites (12,800 to 11,200 cal BP) show that trees were key features in the creation of everyday habitats for the first inhabitants of the Atacama Desert. At two of these sites, QM12 and QM35, the spatial and chronological correlation between trees and hearths reveals that people located their homes under the tree canopy. At residential site QM35, artifact distribution coincides with a grove dated to -11,600 to 11,200 cal BP. A third residential area (QM32) occurred along the grove margins -12,000 to 11,200 cal BP. Based on the distinct cultural material of these two camps, we propose that two different groups intermittently shared this rich wetland- grove environment. The tree taxa suggest a preference for the native Schinus molle, a tree scarcely present on the landscape today, over the endemic, nitrogen- fixing Strombocarpa tamarugo, both for toolmaking and firewood and even though the S. tamarugo was locally more abundant. Together with the spatial and chronological coincidence of campsites, hearths, and trees, we propose that people spared the most abundant and resilient species to create their homes, in turn promoting fertility oases amid the Atacama's hyperaridity. [ABSTRACT FROM AUTHOR]

Summary: Plant–plant positive interactions are key drivers of community structure. Yet, the underlying molecular mechanisms of facilitation processes remain unexplored. We investigated the 'nursing' effect of Maihueniopsis camachoi, a cactus that thrives in the Atacama Desert between c. 2800 and 3800 m above sea level. We hypothesised that an important protective factor is thermal amelioration of less cold‐tolerant species with a corresponding impact on molecular phenotypes.To test this hypothesis, we compared plant cover and temperatures within the cactus foliage with open areas and modelled the effect of temperatures on plant distribution. We combined eco‐metabolomics and machine learning to test the molecular consequences of this association.Multiple species benefited from the interaction with M. camachoi. A conspicuous example was the extended distribution of Atriplex imbricata to colder elevations in association with M. camachoi (400 m higher as compared to plants in open areas). Metabolomics identified 93 biochemical markers predicting the interaction status of A. imbricata with 79% accuracy, independently of year.These findings place M. camachoi as a key species in Atacama plant communities, driving local biodiversity with an impact on molecular phenotypes of nursed species. Our results support the stress‐gradient hypothesis and provide pioneer insights into the metabolic consequences of facilitation. [ABSTRACT FROM AUTHOR]

The water‐dependent nature of arid ecosystems is closely related to the coupling between energy input through photosynthesis and the loss of water through transpiration (Tr), which can be expressed as water use efficiency (WUE). The relationship, however, between environmental factors and plant physiology in controlling evapotranspiration is not well understood in high‐altitude arid environments. Here, we review the use of carbon isotope fractionation (δ13C) to indirectly track fluctuations in WUE and the use of the portable chamber method to partition landscape actual evapotranspiration (ETa) into Tr and bare soil evaporation (Ebs) in the alluvial deposits of the Silala River, a high elevation watershed located in northern Chile. Landscape ETa was also measured with Eddy covariance (EC) systems in the basin's riparian wetland and alluvial hillslope deposits. Carbon isotope results were consistent with what is known from the literature regarding these high‐elevation ecosystems. WUE, as estimated by carbon isotope discrimination values, decreased in summer (the wet season), and increased in winter at all sites. These results were consistent with the EC measurements. Changes in WUE were much greater in the valley wetlands than along the hillslopes, most likely due to a large drop in available soil moisture along the valley bottom during the dry season. Portable chamber results obtained during summer and winter field campaigns showed that at the landscape scale, hillslope ETa was mainly dominated by bare soil evaporation; and ETa partitioning into Tr and Ebs had a seasonal change. This article is categorized under:Engineering Water > MethodsScience of Water > Hydrological Processes [ABSTRACT FROM AUTHOR]

Assessing past and ongoing climate change in the central Andes is critical for understanding the impact of future environmental changes under anthropogenic warming. Emerging from springs located in Bolivia and flowing into northern Chile's Atacama Desert, the Silala River contains inset, terraced wetland (or in‐stream) deposits that provide a unique opportunity to study the impact of past hydroclimate change in a sensitive groundwater system with a small catchment area. After an initial (late Pleistocene) period of deep incision to form the present ravine, in‐stream wetland fine‐grained deposits formed during three phases of aggradation dated to >8.5–1.9 ka (Unit 1), >0.65–0.2 ka (Unit 2), and <0.2 ka to the recent 20th century (Unit 4). These phases of accumulation were coeval with periods of well‐dated records of elevated groundwater tables throughout northern Chile. Phases of abrupt downcutting occurred due to a lowering of the water table after 1.9 ka and before 0.2 ka. The cycle of erosion and deposition clearly continues to the present as evinced by the very recent (21st century) incision of Unit 4 (>1.5 m in some areas) throughout sectors of the Silala where dried‐out standing vegetation can be seen. Such recent incision may be due to multiple different factors, including recent climate change coupled with intense extraction of groundwater resources by the copper mining industry. This article is categorized under:Human Water > Water GovernanceScience of Water > Hydrological ProcessesScience of Water > Water and Environmental Change [ABSTRACT FROM AUTHOR]

Abrupt and rapid changes in human societies are among the most exciting population phenomena. Human populations tend to show rapid expansions from low to high population density along with increased social complexity in just a few generations. Such demographic transitions appear as a remarkable feature of Homo sapiens population dynamics, most likely fuelled by the ability to accumulate cultural/technological innovations that actively modify their environment. We are especially interested in establishing if the demographic transitions of pre-historic populations show the same dynamic signature of the Industrial Revolution transition (a positive relationship between population growth rates and size). Our results show that population growth patterns across different pre-historic societies were similar to those observed during the Industrial Revolution in developed western societies. These features, which appear to have been operating during most of our recent demographic history from hunter–gatherers to modern industrial societies, imply that the dynamics of cooperation underlay sudden population transitions in human societies. This article is part of the theme issue 'Evolution and sustainability: gathering the strands for an Anthropocene synthesis'. [ABSTRACT FROM AUTHOR]

The overall trajectory for the human–environment interaction has been punctuated by demographic boom-and-bust cycles, phases of growth/overshooting as well as of expansion/contraction in productivity. Although this pattern has been explained in terms of an interplay between population growth, social upscaling, ecosystem engineering and climate variability, the evoked demographic–resource-complexity mechanisms have not been empirically tested. By integrating proxy data for population sizes, palaeoclimate and internal societal factors into empirical modelling approaches from the population dynamic theory, we evaluated how endogenous (population sizes, warfare and social upscaling) and exogenous (climate) variables module the dynamic in past agrarian societies. We focused on the inland Atacama Desert, where populations developed agriculture activities by engineering arid and semi-arid landscapes during the last 2000 years. Our modelling approach indicates that these populations experienced a boom-and-bust dynamic over the last millennia, which was coupled to structure feedback between population sizes, hydroclimate, social upscaling, warfare and ecosystem engineering. Thus, the human–environment loop appears closely linked with cooperation, competition, limiting resources and the ability of problem-solving. This article is part of the theme issue 'Evolution and sustainability: gathering the strands for an Anthropocene synthesis'. [ABSTRACT FROM AUTHOR]

High‐Andean peatlands are high‐altitude wetland ecosystems found throughout the arid central Andes of South America. They form through the establishment of specialized grasses and cushion sedges that are well‐adapted to cold temperatures, in areas where groundwater emerges. The Silala River is a groundwater‐fed high‐Andean fluvial system, which emerges in various springs that generate wetlands, the Cajones and Orientales (Bolivia), the river's headwater sources, and the Quebrada Negra (Chile) being the most important. This article reviews detailed monitoring undertaken in the undisturbed Quebrada Negra wetland to provide insights into wetland processes, and to compare its functioning to that of the Bolivian wetlands, which were channelized a century ago. Vegetation composition was found to be similar among the three wetlands, and their spatiotemporal vegetation cover distribution showed strong seasonal and interannual variability. The channelized Bolivian wetlands have the highest annual actual evapotranspiration values (~700 mm, due to their higher vegetation vigor), as estimated using remote sensing, ~10% greater than that obtained in the undisturbed Quebrada Negra wetland. For the Quebrada Negra wetland, groundwater monitoring revealed that hydraulic head contours are consistent with the topography, although water sources to the wetland are complex to identify. While significant groundwater inflows arise at the wetland edges, upwelling and downwelling conditions are observed at various locations within the wetland, similar to other high‐Andean wetlands. The observations suggest that while the underlying groundwater discharge sustains the saturated conditions of the wetland, the spatial variability of groundwater inputs results in a negligible impact of channelization on wetland evapotranspiration. This article is categorized under:Water and Life > Stresses and Pressures on EcosystemsScience of Water > Hydrological Processes [ABSTRACT FROM AUTHOR]